ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags32o08 |
|---|---|
| Clone Library Name | barley_pub |
>MYBA2_ORYSA (Q4JL76) Myb-related protein MYBAS2| Length = 242 Score = 58.9 bits (141), Expect = 4e-09 Identities = 27/38 (71%), Positives = 30/38 (78%) Frame = +1 Query: 10 RKGPWTEKEDAQLVWFVRLLGERRWXFLAQVSGLRGGG 123 RKGPWTE+ED QLV VRL GERRW F+A+VSGL G Sbjct: 9 RKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLNRTG 46
>MYBA1_ORYSA (Q53NK6) Myb-related protein MYBAS1| Length = 237 Score = 57.4 bits (137), Expect = 1e-08 Identities = 26/38 (68%), Positives = 30/38 (78%) Frame = +1 Query: 10 RKGPWTEKEDAQLVWFVRLLGERRWXFLAQVSGLRGGG 123 RKGPWTE+ED QLV VRL G+RRW F+A+VSGL G Sbjct: 9 RKGPWTEQEDLQLVCTVRLFGDRRWDFVAKVSGLNRTG 46
>MYB48_ARATH (Q9LX82) Transcription factor MYB48 (Myb-related protein 48)| (AtMYB48) Length = 256 Score = 55.5 bits (132), Expect = 4e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = +1 Query: 10 RKGPWTEKEDAQLVWFVRLLGERRWXFLAQVSGLRGGG 123 RKGPWTE+ED LV FV L G+RRW F+A+VSGL G Sbjct: 8 RKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTG 45
>MYB59_ARATH (Q4JL84) Transcription factor MYB59 (Myb-related protein 59)| (AtMYB59) Length = 235 Score = 55.1 bits (131), Expect = 5e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = +1 Query: 10 RKGPWTEKEDAQLVWFVRLLGERRWXFLAQVSGLRGGG 123 RKGPWTE+ED LV FV L G+RRW F+A+VSGL G Sbjct: 9 RKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTG 46
>ODO1_PETHY (Q50EX6) ODORANT1 protein (MYB-like protein ODO1)| Length = 294 Score = 36.2 bits (82), Expect = 0.025 Identities = 14/41 (34%), Positives = 26/41 (63%) Frame = +1 Query: 1 MAARKGPWTEKEDAQLVWFVRLLGERRWXFLAQVSGLRGGG 123 + +KGPWT +ED +L+ F+ G+ W + +++GL+ G Sbjct: 10 LGVKKGPWTAEEDKKLISFILTNGQCCWRAVPKLAGLKRCG 50
>MYBC_MAIZE (P10290) Anthocyanin regulatory C1 protein| Length = 273 Score = 36.2 bits (82), Expect = 0.025 Identities = 16/38 (42%), Positives = 23/38 (60%) Frame = +1 Query: 10 RKGPWTEKEDAQLVWFVRLLGERRWXFLAQVSGLRGGG 123 ++G WT KED L +V+ GE +W + Q +GLR G Sbjct: 13 KRGAWTSKEDDALAAYVKAHGEGKWREVPQKAGLRRCG 50
>GAM1_ORYSA (P93417) Transcription factor GAMYB (OsGAMyb)| Length = 553 Score = 35.8 bits (81), Expect = 0.033 Identities = 16/34 (47%), Positives = 22/34 (64%) Frame = +1 Query: 10 RKGPWTEKEDAQLVWFVRLLGERRWXFLAQVSGL 111 +KGPWT EDA LV +V+ GE W + + +GL Sbjct: 41 KKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGL 74
>MYBA_MOUSE (P51960) Myb-related protein A (A-Myb)| Length = 751 Score = 35.4 bits (80), Expect = 0.043 Identities = 12/29 (41%), Positives = 21/29 (72%) Frame = +1 Query: 13 KGPWTEKEDAQLVWFVRLLGERRWXFLAQ 99 KGPWT++ED +++ V+ G +RW +A+ Sbjct: 87 KGPWTKEEDQRVIELVQKYGPKRWSLIAK 115
>MYBA_HUMAN (P10243) Myb-related protein A (A-Myb)| Length = 752 Score = 35.4 bits (80), Expect = 0.043 Identities = 12/29 (41%), Positives = 21/29 (72%) Frame = +1 Query: 13 KGPWTEKEDAQLVWFVRLLGERRWXFLAQ 99 KGPWT++ED +++ V+ G +RW +A+ Sbjct: 87 KGPWTKEEDQRVIELVQKYGPKRWSLIAK 115
>MYB21_ARATH (Q9LK95) Transcription factor MYB21 (Myb-related protein 21)| (AtMYB21) (Myb homolog 3) (AtMyb3) Length = 226 Score = 35.4 bits (80), Expect = 0.043 Identities = 16/38 (42%), Positives = 24/38 (63%) Frame = +1 Query: 10 RKGPWTEKEDAQLVWFVRLLGERRWXFLAQVSGLRGGG 123 RKGPWT +ED L+ ++ G+ W LA+ +GL+ G Sbjct: 21 RKGPWTMEEDLILINYIANHGDGVWNSLAKSAGLKRTG 58
>MYBA_CHICK (P52550) Myb-related protein A (A-Myb)| Length = 757 Score = 35.4 bits (80), Expect = 0.043 Identities = 12/29 (41%), Positives = 21/29 (72%) Frame = +1 Query: 13 KGPWTEKEDAQLVWFVRLLGERRWXFLAQ 99 KGPWT++ED +++ V+ G +RW +A+ Sbjct: 87 KGPWTKEEDQRVIELVQKYGPKRWSLIAK 115
>MYB_HUMAN (P10242) Myb proto-oncogene protein (C-myb)| Length = 640 Score = 35.0 bits (79), Expect = 0.057 Identities = 12/29 (41%), Positives = 21/29 (72%) Frame = +1 Query: 13 KGPWTEKEDAQLVWFVRLLGERRWXFLAQ 99 KGPWT++ED +++ V+ G +RW +A+ Sbjct: 92 KGPWTKEEDQRVIELVQKYGPKRWSVIAK 120
>MYB_BOVIN (P46200) Myb proto-oncogene protein (C-myb)| Length = 640 Score = 35.0 bits (79), Expect = 0.057 Identities = 12/29 (41%), Positives = 21/29 (72%) Frame = +1 Query: 13 KGPWTEKEDAQLVWFVRLLGERRWXFLAQ 99 KGPWT++ED +++ V+ G +RW +A+ Sbjct: 92 KGPWTKEEDQRVIELVQKYGPKRWSVIAK 120
>MYB_MOUSE (P06876) Myb proto-oncogene protein (C-myb)| Length = 636 Score = 35.0 bits (79), Expect = 0.057 Identities = 12/29 (41%), Positives = 21/29 (72%) Frame = +1 Query: 13 KGPWTEKEDAQLVWFVRLLGERRWXFLAQ 99 KGPWT++ED +++ V+ G +RW +A+ Sbjct: 92 KGPWTKEEDQRVIELVQKYGPKRWSVIAK 120
>MYB_CHICK (P01103) Myb proto-oncogene protein (C-myb)| Length = 641 Score = 35.0 bits (79), Expect = 0.057 Identities = 12/29 (41%), Positives = 21/29 (72%) Frame = +1 Query: 13 KGPWTEKEDAQLVWFVRLLGERRWXFLAQ 99 KGPWT++ED +++ V+ G +RW +A+ Sbjct: 92 KGPWTKEEDQRVIELVQKYGPKRWSVIAK 120
>MYB_XENLA (Q08759) Myb protein| Length = 624 Score = 34.7 bits (78), Expect = 0.074 Identities = 12/29 (41%), Positives = 20/29 (68%) Frame = +1 Query: 13 KGPWTEKEDAQLVWFVRLLGERRWXFLAQ 99 KGPWT++ED +++ V G +RW +A+ Sbjct: 89 KGPWTKEEDQRVIELVHKYGPKRWSVIAK 117
>MYB1_NEUCR (O13493) Myb-like DNA binding protein myb-1| Length = 324 Score = 34.3 bits (77), Expect = 0.097 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +1 Query: 10 RKGPWTEKEDAQLVWFVRLLGERRWXFLAQVSGLR 114 R+GPW+ ED +L+ V+ LG W +A++ G R Sbjct: 8 RRGPWSAGEDQRLIKLVKDLGPGNWVNVARILGTR 42
>MYBB_MOUSE (P48972) Myb-related protein B (B-Myb)| Length = 704 Score = 34.3 bits (77), Expect = 0.097 Identities = 11/29 (37%), Positives = 21/29 (72%) Frame = +1 Query: 13 KGPWTEKEDAQLVWFVRLLGERRWXFLAQ 99 KGPWT++ED +++ V+ G ++W +A+ Sbjct: 83 KGPWTKEEDQKVIELVKKYGTKQWTLIAK 111 Score = 31.2 bits (69), Expect = 0.82 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = +1 Query: 13 KGPWTEKEDAQLVWFVRLLGERRWXFLA 96 K WT +ED QL VR G++ W FLA Sbjct: 31 KVKWTHEEDEQLRALVRQFGQQDWKFLA 58
>MYBB_HUMAN (P10244) Myb-related protein B (B-Myb)| Length = 700 Score = 34.3 bits (77), Expect = 0.097 Identities = 11/29 (37%), Positives = 21/29 (72%) Frame = +1 Query: 13 KGPWTEKEDAQLVWFVRLLGERRWXFLAQ 99 KGPWT++ED +++ V+ G ++W +A+ Sbjct: 83 KGPWTKEEDQKVIELVKKYGTKQWTLIAK 111 Score = 31.2 bits (69), Expect = 0.82 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = +1 Query: 13 KGPWTEKEDAQLVWFVRLLGERRWXFLA 96 K WT +ED QL VR G++ W FLA Sbjct: 31 KVKWTHEEDEQLRALVRQFGQQDWKFLA 58
>MYBB_CHICK (Q03237) Myb-related protein B (B-Myb)| Length = 686 Score = 34.3 bits (77), Expect = 0.097 Identities = 11/29 (37%), Positives = 21/29 (72%) Frame = +1 Query: 13 KGPWTEKEDAQLVWFVRLLGERRWXFLAQ 99 KGPWT++ED +++ V+ G ++W +A+ Sbjct: 83 KGPWTKEEDQKVIELVKKYGTKQWTLIAK 111 Score = 32.0 bits (71), Expect = 0.48 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = +1 Query: 13 KGPWTEKEDAQLVWFVRLLGERRWXFLA 96 K WT++ED QL VR G+ W FLA Sbjct: 31 KVKWTQEEDEQLKMLVRHYGQNDWKFLA 58
>MYBB_XENLA (P52551) Myb-related protein B (B-Myb) (Myb-related protein 1)| (XMYB1) Length = 743 Score = 34.3 bits (77), Expect = 0.097 Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%) Frame = +1 Query: 13 KGPWTEKEDAQLVWFVRLLGERRWXFLA-QVSGLRG 117 KGPWT++ED +++ V+ G + W +A Q+ G G Sbjct: 83 KGPWTKEEDEKVIELVKKYGTKHWTLIAKQLRGRMG 118
>MYB4_ARATH (Q9SZP1) Transcription repressor MYB4 (Myb-related protein 4)| (AtMYB4) Length = 282 Score = 34.3 bits (77), Expect = 0.097 Identities = 14/33 (42%), Positives = 22/33 (66%) Frame = +1 Query: 13 KGPWTEKEDAQLVWFVRLLGERRWXFLAQVSGL 111 KG WT++ED +LV +++ GE W L + +GL Sbjct: 14 KGAWTKEEDERLVAYIKAHGEGCWRSLPKAAGL 46
>MYB38_MAIZE (P20025) Myb-related protein Zm38| Length = 255 Score = 34.3 bits (77), Expect = 0.097 Identities = 14/33 (42%), Positives = 22/33 (66%) Frame = +1 Query: 13 KGPWTEKEDAQLVWFVRLLGERRWXFLAQVSGL 111 +G WT++ED +LV ++R GE W L + +GL Sbjct: 14 RGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGL 46
>MYB_AVIMB (P01104) Transforming protein Myb| Length = 382 Score = 33.9 bits (76), Expect = 0.13 Identities = 12/29 (41%), Positives = 21/29 (72%) Frame = +1 Query: 13 KGPWTEKEDAQLVWFVRLLGERRWXFLAQ 99 KGPWT++ED +++ V+ G +RW +A+ Sbjct: 21 KGPWTKEEDQRVIEHVQKYGPKRWSDIAK 49
>MYB4_ORYSA (Q7XBH4) Myb-related protein Myb4 (OsMyb4) (Transcription factor| RLTR1) Length = 257 Score = 33.9 bits (76), Expect = 0.13 Identities = 15/37 (40%), Positives = 21/37 (56%) Frame = +1 Query: 1 MAARKGPWTEKEDAQLVWFVRLLGERRWXFLAQVSGL 111 M +KGPWT +ED LV ++ G W L + +GL Sbjct: 10 MGLKKGPWTPEEDKVLVAHIQRHGHGNWRALPKQAGL 46
>MYB_DROME (P04197) Myb protein| Length = 657 Score = 33.9 bits (76), Expect = 0.13 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +1 Query: 13 KGPWTEKEDAQLVWFVRLLGERRWXFLAQ 99 KGPWT ED ++ VR G ++W +A+ Sbjct: 136 KGPWTRDEDDMVIKLVRNFGPKKWTLIAR 164
>MYBA_XENLA (Q05935) Myb-related protein A (A-Myb) (XAMYB) (MYB-related protein| 2) (XMYB2) Length = 728 Score = 33.9 bits (76), Expect = 0.13 Identities = 11/29 (37%), Positives = 20/29 (68%) Frame = +1 Query: 13 KGPWTEKEDAQLVWFVRLLGERRWXFLAQ 99 KGPWT++ED +++ V G ++W +A+ Sbjct: 86 KGPWTKEEDQRVIELVHKYGPKKWSIIAK 114
>MYB98_ARATH (Q9S7L2) Transcription factor MYB98 (Myb-related protein 98)| (AtMYB98) Length = 427 Score = 33.5 bits (75), Expect = 0.17 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = +1 Query: 13 KGPWTEKEDAQLVWFVRLLGERRWXFLAQV 102 KG WT +ED L+ V G R+W +AQV Sbjct: 217 KGQWTAEEDRVLIQLVEKYGLRKWSHIAQV 246
>MYB1_HORVU (P20026) Myb-related protein Hv1| Length = 267 Score = 32.3 bits (72), Expect = 0.37 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = +1 Query: 13 KGPWTEKEDAQLVWFVRLLGERRWXFLAQVSGL 111 KG WT++ED +L +++ GE W L + +GL Sbjct: 14 KGAWTKEEDDRLTAYIKAHGEGCWRSLPKAAGL 46
>MYB2_PHYPA (P80073) Myb-related protein Pp2| Length = 421 Score = 31.2 bits (69), Expect = 0.82 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = +1 Query: 10 RKGPWTEKEDAQLVWFVRLLGERRWXFLAQVSGL 111 R+GPWT +ED +LV + G W + +++GL Sbjct: 13 RRGPWTSEEDQKLVSHITNNGLSCWRAIPKLAGL 46
>MB3R1_ARATH (Q9S7G7) Myb-related protein 3R-1 (Plant c-MYB-like protein 1)| (Protein PC-MYB1) (PC-MYB1) Length = 776 Score = 30.8 bits (68), Expect = 1.1 Identities = 10/29 (34%), Positives = 19/29 (65%) Frame = +1 Query: 13 KGPWTEKEDAQLVWFVRLLGERRWXFLAQ 99 KGPW+++ED ++ V G ++W ++Q Sbjct: 87 KGPWSKEEDNTIIDLVEKYGPKKWSTISQ 115
>FR1OP_MACFA (Q4R7V3) FGFR1 oncogene partner| Length = 379 Score = 30.4 bits (67), Expect = 1.4 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 4/44 (9%) Frame = -1 Query: 143 GSGWID----HPPPRKPET*AKKXQRRSPSKRTNHTSCASSFSV 24 G G +D HPPP+ PE K + +PSK+ N+ + S SV Sbjct: 145 GEGALDLSDVHPPPKSPE--GKTSAQTTPSKKANNEANQSDTSV 186
>MYB1_MAIZE (P20024) Myb-related protein Zm1| Length = 340 Score = 30.0 bits (66), Expect = 1.8 Identities = 11/33 (33%), Positives = 20/33 (60%) Frame = +1 Query: 13 KGPWTEKEDAQLVWFVRLLGERRWXFLAQVSGL 111 +G WT +ED +L+ +++ G W L + +GL Sbjct: 16 RGSWTPQEDMRLIAYIQKHGHTNWRALPKQAGL 48
>MYBH_DICDI (P34127) Myb-like protein (Fragment)| Length = 451 Score = 29.3 bits (64), Expect = 3.1 Identities = 10/28 (35%), Positives = 18/28 (64%) Frame = +1 Query: 13 KGPWTEKEDAQLVWFVRLLGERRWXFLA 96 KG WT+ ED +++ V+ G ++W +A Sbjct: 201 KGAWTKDEDDKVIELVKTYGPKKWSDIA 228 Score = 27.7 bits (60), Expect = 9.1 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = +1 Query: 13 KGPWTEKEDAQLVWFVRLLGERRWXFLAQ 99 KG WT +ED L+ V L ++ W +A+ Sbjct: 149 KGKWTSEEDQILIKAVNLHNQKNWKKIAE 177
>TT2_ARATH (Q9FJA2) TRANSPARENT TESTA 2 protein (Myb-related protein 123)| (AtMYB123) (Myb-related transcription factor LBM2-like) Length = 258 Score = 29.3 bits (64), Expect = 3.1 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = +1 Query: 13 KGPWTEKEDAQLVWFVRLLGERRWXFLAQVSGLRGGG 123 +G WT+ ED L ++ GE +W L +GL+ G Sbjct: 16 RGAWTDHEDKILRDYITTHGEGKWSTLPNQAGLKRCG 52
>MYB86_ARATH (Q8LPH6) Transcription factor MYB86 (Myb-related protein 86)| (AtMYB86) (Myb homolog 4) (AtMyb4) Length = 352 Score = 28.5 bits (62), Expect = 5.3 Identities = 12/38 (31%), Positives = 23/38 (60%) Frame = +1 Query: 10 RKGPWTEKEDAQLVWFVRLLGERRWXFLAQVSGLRGGG 123 RKG W+ +ED +L+ ++ G W + +++GL+ G Sbjct: 13 RKGLWSPEEDEKLLNYITRHGHGCWSSVPKLAGLQRCG 50
>LAF1_ARATH (Q9M0K4) Transcription factor LAF1 (Long after far-red light| protein 1) (Myb-related protein 18) (AtMYB18) Length = 283 Score = 27.7 bits (60), Expect = 9.1 Identities = 13/38 (34%), Positives = 20/38 (52%) Frame = +1 Query: 10 RKGPWTEKEDAQLVWFVRLLGERRWXFLAQVSGLRGGG 123 RKG W+ +ED +L F+ G W + +GL+ G Sbjct: 11 RKGLWSPEEDEKLRSFILSYGHSCWTTVPIKAGLQRNG 48
>SNPC4_MOUSE (Q8BP86) snRNA-activating protein complex subunit 4 (SNAPc subunit| 4) (snRNA-activating protein complex 190 kDa subunit) (SNAPc 190 kDa subunit) Length = 1333 Score = 27.7 bits (60), Expect = 9.1 Identities = 12/37 (32%), Positives = 17/37 (45%) Frame = +1 Query: 10 RKGPWTEKEDAQLVWFVRLLGERRWXFLAQVSGLRGG 120 +KG W KE+ QL+ + G W +A R G Sbjct: 452 KKGRWNAKEEQQLIQLIEKYGVGHWARIASELPHRSG 488 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,270,521 Number of Sequences: 219361 Number of extensions: 249997 Number of successful extensions: 718 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 677 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 717 length of database: 80,573,946 effective HSP length: 25 effective length of database: 75,089,921 effective search space used: 1802158104 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
