ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags32o08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC108504.2| Oryza sativa (japonica cultivar-group) chromosome... 159 3e-36
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 159 3e-36
3dbj|AK111634.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 3e-36
4dbj|AK099223.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 3e-36
5gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome... 159 3e-36
6emb|AJ237661.1|OSA237661 Oryza sativa mRNA for Myb factor protei... 100 2e-18
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 98 9e-18
8dbj|AP003627.3| Oryza sativa (japonica cultivar-group) genomic D... 98 9e-18
9gb|AY569615.1| Oryza sativa (japonica cultivar-group) MYB transc... 98 9e-18
10dbj|AK066180.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 9e-18
11ref|NM_189493.1| Oryza sativa (japonica cultivar-group), predic... 74 1e-10
12gb|AY398581.1| Oryza sativa (indica cultivar-group) Myb factor p... 74 1e-10
13gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.12
14gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbare sta... 44 0.12
15dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.12
16gb|AC027660.2| Oryza sativa (japonica cultivar-group) chromosome... 40 1.8
17gb|AC131912.6| Mus musculus chromosome 9, clone RP24-164A20, com... 40 1.8
18gb|BT008981.2| Triticum aestivum clone wdk2c.pk006.d4:fis, full ... 40 1.8
19emb|AL731579.4|OSJN00225 Oryza sativa genomic DNA, chromosome 4,... 40 1.8
20emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromosome 4,... 40 1.8
21dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.8
22dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.8
23dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.8
24dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.8
25dbj|AP005619.3| Oryza sativa (japonica cultivar-group) genomic D... 40 1.8
26dbj|AP005527.3| Oryza sativa (japonica cultivar-group) genomic D... 40 1.8
27dbj|AP005110.2| Oryza sativa (japonica cultivar-group) genomic D... 40 1.8
28dbj|AK107483.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 1.8
29gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 1.8
30ref|XM_507362.1| PREDICTED Oryza sativa (japonica cultivar-group... 38 7.2
31ref|XM_477674.1| Oryza sativa (japonica cultivar-group), mRNA 38 7.2
32ref|XM_506288.2| PREDICTED Oryza sativa (japonica cultivar-group... 38 7.2
33ref|XM_747733.1| Aspergillus fumigatus Af293 histidine-3 protein... 38 7.2
34emb|CR555306.1| Azoarcus sp. EbN1 complete genome 38 7.2
35ref|XM_693552.1| PREDICTED: Danio rerio similar to Myosin XV (Un... 38 7.2
36gb|AC154446.2| Mus musculus BAC clone RP24-181E7 from chromosome... 38 7.2
37gb|AE006470.1| Chlorobium tepidum TLS, complete genome 38 7.2
38dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.2
39dbj|AP005247.3| Oryza sativa (japonica cultivar-group) genomic D... 38 7.2
40dbj|AK104106.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 7.2
41dbj|AK101796.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 7.2
42dbj|AK061243.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 7.2
43emb|AL928835.6| Zebrafish DNA sequence from clone CH211-201P7 in... 38 7.2 
>gb|AC108504.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1654_B10,
             complete sequence
          Length = 140282

 Score =  159 bits (80), Expect = 3e-36
 Identities = 108/118 (91%)
 Strand = Plus / Plus

                                                                         
Query: 9     gaggaaggggccgtggacggagaaggaggacgcacaactggtatggttcgtgcgcttgct 68
             |||||||||||| ||||||||| |||||||||  |||||||||||||||||||||||| |
Sbjct: 42631 gaggaaggggccatggacggagcaggaggacgtccaactggtatggttcgtgcgcttgtt 42690

                                                                       
Query: 69    cggggaacggcgttggnatttcttagctcaggtctcaggtttgcgcggnggcgggtga 126
             ||||||||| |||||| ||||||||||  ||||||||||||||||||| |||||||||
Sbjct: 42691 cggggaacgtcgttgggatttcttagcaaaggtctcaggtttgcgcggtggcgggtga 42748
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score =  159 bits (80), Expect = 3e-36
 Identities = 108/118 (91%)
 Strand = Plus / Plus

                                                                          
Query: 9      gaggaaggggccgtggacggagaaggaggacgcacaactggtatggttcgtgcgcttgct 68
              |||||||||||| ||||||||| |||||||||  |||||||||||||||||||||||| |
Sbjct: 770189 gaggaaggggccatggacggagcaggaggacgtccaactggtatggttcgtgcgcttgtt 770248

                                                                        
Query: 69     cggggaacggcgttggnatttcttagctcaggtctcaggtttgcgcggnggcgggtga 126
              ||||||||| |||||| ||||||||||  ||||||||||||||||||| |||||||||
Sbjct: 770249 cggggaacgtcgttgggatttcttagcaaaggtctcaggtttgcgcggtggcgggtga 770306
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>dbj|AK111634.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119H17, full
           insert sequence
          Length = 2126

 Score =  159 bits (80), Expect = 3e-36
 Identities = 108/118 (91%)
 Strand = Plus / Plus

                                                                       
Query: 9   gaggaaggggccgtggacggagaaggaggacgcacaactggtatggttcgtgcgcttgct 68
           |||||||||||| ||||||||| |||||||||  |||||||||||||||||||||||| |
Sbjct: 307 gaggaaggggccatggacggagcaggaggacgtccaactggtatggttcgtgcgcttgtt 366

                                                                     
Query: 69  cggggaacggcgttggnatttcttagctcaggtctcaggtttgcgcggnggcgggtga 126
           ||||||||| |||||| ||||||||||  ||||||||||||||||||| |||||||||
Sbjct: 367 cggggaacgtcgttgggatttcttagcaaaggtctcaggtttgcgcggtggcgggtga 424
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>dbj|AK099223.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091O17, full
           insert sequence
          Length = 2124

 Score =  159 bits (80), Expect = 3e-36
 Identities = 108/118 (91%)
 Strand = Plus / Plus

                                                                       
Query: 9   gaggaaggggccgtggacggagaaggaggacgcacaactggtatggttcgtgcgcttgct 68
           |||||||||||| ||||||||| |||||||||  |||||||||||||||||||||||| |
Sbjct: 307 gaggaaggggccatggacggagcaggaggacgtccaactggtatggttcgtgcgcttgtt 366

                                                                     
Query: 69  cggggaacggcgttggnatttcttagctcaggtctcaggtttgcgcggnggcgggtga 126
           ||||||||| |||||| ||||||||||  ||||||||||||||||||| |||||||||
Sbjct: 367 cggggaacgtcgttgggatttcttagcaaaggtctcaggtttgcgcggtggcgggtga 424
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>gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0041A22,
              complete sequence
          Length = 117919

 Score =  159 bits (80), Expect = 3e-36
 Identities = 108/118 (91%)
 Strand = Plus / Plus

                                                                          
Query: 9      gaggaaggggccgtggacggagaaggaggacgcacaactggtatggttcgtgcgcttgct 68
              |||||||||||| ||||||||| |||||||||  |||||||||||||||||||||||| |
Sbjct: 115370 gaggaaggggccatggacggagcaggaggacgtccaactggtatggttcgtgcgcttgtt 115429

                                                                        
Query: 69     cggggaacggcgttggnatttcttagctcaggtctcaggtttgcgcggnggcgggtga 126
              ||||||||| |||||| ||||||||||  ||||||||||||||||||| |||||||||
Sbjct: 115430 cggggaacgtcgttgggatttcttagcaaaggtctcaggtttgcgcggtggcgggtga 115487
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>emb|AJ237661.1|OSA237661 Oryza sativa mRNA for Myb factor protein, partial
          Length = 1116

 Score = 99.6 bits (50), Expect = 2e-18
 Identities = 99/116 (85%)
 Strand = Plus / Plus

                                                                       
Query: 12  gaaggggccgtggacggagaaggaggacgcacaactggtatggttcgtgcgcttgctcgg 71
           ||||||||||||||||||| |||||||||  ||  |||| |||||||||||  |||| ||
Sbjct: 6   gaaggggccgtggacggagcaggaggacgtgcagttggtttggttcgtgcggctgctggg 65

                                                                   
Query: 72  ggaacggcgttggnatttcttagctcaggtctcaggtttgcgcggnggcgggtgat 127
            | |||||| ||| ||||||||||  |||| |||||||||||||| ||||||||||
Sbjct: 66  cggacggcggtgggatttcttagcaaaggtgtcaggtttgcgcggcggcgggtgat 121
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 97.6 bits (49), Expect = 9e-18
 Identities = 98/115 (85%)
 Strand = Plus / Plus

                                                                            
Query: 13       aaggggccgtggacggagaaggaggacgcacaactggtatggttcgtgcgcttgctcggg 72
                ||||| |||||||||||| |||||||||  ||  |||| |||||||||||  |||| || 
Sbjct: 43089006 aagggcccgtggacggagcaggaggacgtgcagttggtttggttcgtgcggctgctgggc 43089065

                                                                       
Query: 73       gaacggcgttggnatttcttagctcaggtctcaggtttgcgcggnggcgggtgat 127
                |||||||| ||| ||||||||||  |||| |||||||||||||| ||||||||||
Sbjct: 43089066 gaacggcggtgggatttcttagcaaaggtgtcaggtttgcgcggcggcgggtgat 43089120
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>dbj|AP003627.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0459B04
          Length = 142475

 Score = 97.6 bits (49), Expect = 9e-18
 Identities = 98/115 (85%)
 Strand = Plus / Plus

                                                                         
Query: 13    aaggggccgtggacggagaaggaggacgcacaactggtatggttcgtgcgcttgctcggg 72
             ||||| |||||||||||| |||||||||  ||  |||| |||||||||||  |||| || 
Sbjct: 86035 aagggcccgtggacggagcaggaggacgtgcagttggtttggttcgtgcggctgctgggc 86094

                                                                    
Query: 73    gaacggcgttggnatttcttagctcaggtctcaggtttgcgcggnggcgggtgat 127
             |||||||| ||| ||||||||||  |||| |||||||||||||| ||||||||||
Sbjct: 86095 gaacggcggtgggatttcttagcaaaggtgtcaggtttgcgcggcggcgggtgat 86149
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>gb|AY569615.1| Oryza sativa (japonica cultivar-group) MYB transcription factor
           (Myb) precursor RNA, complete cds
          Length = 1555

 Score = 97.6 bits (49), Expect = 9e-18
 Identities = 98/115 (85%)
 Strand = Plus / Plus

                                                                       
Query: 13  aaggggccgtggacggagaaggaggacgcacaactggtatggttcgtgcgcttgctcggg 72
           ||||| |||||||||||| |||||||||  ||  |||| |||||||||||  |||| || 
Sbjct: 245 aagggcccgtggacggagcaggaggacgtgcagttggtttggttcgtgcggctgctgggc 304

                                                                  
Query: 73  gaacggcgttggnatttcttagctcaggtctcaggtttgcgcggnggcgggtgat 127
           |||||||| ||| ||||||||||  |||| |||||||||||||| ||||||||||
Sbjct: 305 gaacggcggtgggatttcttagcaaaggtgtcaggtttgcgcggcggcgggtgat 359
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>dbj|AK066180.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058H19, full
           insert sequence
          Length = 1551

 Score = 97.6 bits (49), Expect = 9e-18
 Identities = 98/115 (85%)
 Strand = Plus / Plus

                                                                       
Query: 13  aaggggccgtggacggagaaggaggacgcacaactggtatggttcgtgcgcttgctcggg 72
           ||||| |||||||||||| |||||||||  ||  |||| |||||||||||  |||| || 
Sbjct: 250 aagggcccgtggacggagcaggaggacgtgcagttggtttggttcgtgcggctgctgggc 309

                                                                  
Query: 73  gaacggcgttggnatttcttagctcaggtctcaggtttgcgcggnggcgggtgat 127
           |||||||| ||| ||||||||||  |||| |||||||||||||| ||||||||||
Sbjct: 310 gaacggcggtgggatttcttagcaaaggtgtcaggtttgcgcggcggcgggtgat 364
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>ref|NM_189493.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 666

 Score = 73.8 bits (37), Expect = 1e-10
 Identities = 84/100 (84%)
 Strand = Plus / Plus

                                                                       
Query: 13  aaggggccgtggacggagaaggaggacgcacaactggtatggttcgtgcgcttgctcggg 72
           ||||| |||||||||||| |||||||||  ||  |||| |||||||||||  |||| || 
Sbjct: 7   aagggcccgtggacggagcaggaggacgtgcagttggtttggttcgtgcggctgctgggc 66

                                                   
Query: 73  gaacggcgttggnatttcttagctcaggtctcaggtttgc 112
           |||||||| ||| ||||||||||  |||| ||||||||||
Sbjct: 67  gaacggcggtgggatttcttagcaaaggtgtcaggtttgc 106
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>gb|AY398581.1| Oryza sativa (indica cultivar-group) Myb factor protein (Myb) mRNA,
           complete cds, alternatively spliced
          Length = 666

 Score = 73.8 bits (37), Expect = 1e-10
 Identities = 84/100 (84%)
 Strand = Plus / Plus

                                                                       
Query: 13  aaggggccgtggacggagaaggaggacgcacaactggtatggttcgtgcgcttgctcggg 72
           ||||| |||||||||||| |||||||||  ||  |||| |||||||||||  |||| || 
Sbjct: 7   aagggcccgtggacggagcaggaggacgtgcagttggtttggttcgtgcggctgctgggc 66

                                                   
Query: 73  gaacggcgttggnatttcttagctcaggtctcaggtttgc 112
           |||||||| ||| ||||||||||  |||| ||||||||||
Sbjct: 67  gaacggcggtgggatttcttagcaaaggtgtcaggtttgc 106
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 12       gaaggggccgtggacggagaaggaggacgc 41
                ||||||||||||||||| | ||||||||||
Sbjct: 10337211 gaaggggccgtggacggcggaggaggacgc 10337182
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>gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbare stain, clone
             OSJNBb0036D03, from chromosome 3, complete sequence
          Length = 125800

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 12    gaaggggccgtggacggagaaggaggacgc 41
             ||||||||||||||||| | ||||||||||
Sbjct: 50677 gaaggggccgtggacggcggaggaggacgc 50648
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 12       gaaggggccgtggacggagaaggaggacgc 41
                ||||||||||||||||| | ||||||||||
Sbjct: 10335312 gaaggggccgtggacggcggaggaggacgc 10335283
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>gb|AC027660.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone BAC
              nbxb0045B21, complete sequence
          Length = 152397

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      ggcgaggaaggggccgtgga 25
              ||||||||||||||||||||
Sbjct: 143630 ggcgaggaaggggccgtgga 143611
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>gb|AC131912.6| Mus musculus chromosome 9, clone RP24-164A20, complete sequence
          Length = 204724

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 92     tagctcaggtctcaggtttg 111
              ||||||||||||||||||||
Sbjct: 154307 tagctcaggtctcaggtttg 154288
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>gb|BT008981.2| Triticum aestivum clone wdk2c.pk006.d4:fis, full insert mRNA
           sequence
          Length = 1199

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 12  gaaggggccgtggacggagaaggaggac 39
           ||||||||||||||||| | ||||||||
Sbjct: 146 gaaggggccgtggacggcggaggaggac 173
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>emb|AL731579.4|OSJN00225 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006A01,
             complete sequence
          Length = 143157

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 16    gggccgtggacggagaaggaggac 39
             ||||||||||||||| ||||||||
Sbjct: 10005 gggccgtggacggaggaggaggac 9982
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>emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009P12,
              complete sequence
          Length = 179644

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 16     gggccgtggacggagaaggaggac 39
              ||||||||||||||| ||||||||
Sbjct: 107075 gggccgtggacggaggaggaggac 107052
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 16       gggccgtggacggagaaggaggac 39
                ||||||||||||||| ||||||||
Sbjct: 29970323 gggccgtggacggaggaggaggac 29970300
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 6        ggcgaggaaggggccgtgga 25
                ||||||||||||||||||||
Sbjct: 13975004 ggcgaggaaggggccgtgga 13974985
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 12      gaaggggccgtggacggagaaggaggac 39
               ||||||||||||||||| | ||||||||
Sbjct: 8262071 gaaggggccgtggacggcggaggaggac 8262098
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 12       gaaggggccgtggacggagaaggaggacgcac 43
                ||||||||| ||||||| | ||||||||||||
Sbjct: 19603921 gaaggggccatggacggcggaggaggacgcac 19603952
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>dbj|AP005619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0624H09
          Length = 158719

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 12     gaaggggccgtggacggagaaggaggac 39
              ||||||||||||||||| | ||||||||
Sbjct: 154434 gaaggggccgtggacggcggaggaggac 154461
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>dbj|AP005527.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0603C10
          Length = 187620

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 12    gaaggggccgtggacggagaaggaggac 39
             ||||||||||||||||| | ||||||||
Sbjct: 55576 gaaggggccgtggacggcggaggaggac 55603
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>dbj|AP005110.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0605D08
          Length = 144340

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 12    gaaggggccgtggacggagaaggaggacgcac 43
             ||||||||| ||||||| | ||||||||||||
Sbjct: 70207 gaaggggccatggacggcggaggaggacgcac 70238
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>dbj|AK107483.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-C06, full
           insert sequence
          Length = 1163

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 12  gaaggggccgtggacggagaaggaggac 39
           ||||||||||||||||| | ||||||||
Sbjct: 217 gaaggggccgtggacggcggaggaggac 244
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 6        ggcgaggaaggggccgtgga 25
                ||||||||||||||||||||
Sbjct: 13982346 ggcgaggaaggggccgtgga 13982327
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>ref|XM_507362.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0077F02.127
           mRNA
          Length = 1121

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 2   tggcggcgaggaaggggcc 20
           |||||||||||||||||||
Sbjct: 287 tggcggcgaggaaggggcc 269
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>ref|XM_477674.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1099

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 2   tggcggcgaggaaggggcc 20
           |||||||||||||||||||
Sbjct: 288 tggcggcgaggaaggggcc 270
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>ref|XM_506288.2| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0077F02.127
           mRNA
          Length = 1103

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 2   tggcggcgaggaaggggcc 20
           |||||||||||||||||||
Sbjct: 289 tggcggcgaggaaggggcc 271
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>ref|XM_747733.1| Aspergillus fumigatus Af293 histidine-3 protein (Afu1g14570) partial
            mRNA
          Length = 2619

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 12   gaaggggccgtggacggagaagg 34
            ||||||||||||| |||||||||
Sbjct: 1179 gaaggggccgtgggcggagaagg 1201
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 98      aggtctcaggtttgcgcgg 116
               |||||||||||||||||||
Sbjct: 1134179 aggtctcaggtttgcgcgg 1134197
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>ref|XM_693552.1| PREDICTED: Danio rerio similar to Myosin XV (Unconventional
            myosin-15) (LOC570113), mRNA
          Length = 5808

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 7    gcgaggaaggggccgtgga 25
            |||||||||||||||||||
Sbjct: 2424 gcgaggaaggggccgtgga 2442
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>gb|AC154446.2| Mus musculus BAC clone RP24-181E7 from chromosome 14, complete sequence
          Length = 163771

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 21    gtggacggagaaggaggac 39
             |||||||||||||||||||
Sbjct: 98726 gtggacggagaaggaggac 98708
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>gb|AE006470.1| Chlorobium tepidum TLS, complete genome
          Length = 2154946

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 38      acgcacaactggtatggtt 56
               |||||||||||||||||||
Sbjct: 1251481 acgcacaactggtatggtt 1251499
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 2        tggcggcgaggaaggggcc 20
                |||||||||||||||||||
Sbjct: 13045356 tggcggcgaggaaggggcc 13045338
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>dbj|AP005247.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0077F02
          Length = 172442

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 2      tggcggcgaggaaggggcc 20
              |||||||||||||||||||
Sbjct: 119653 tggcggcgaggaaggggcc 119635
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>dbj|AK104106.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-D02, full
           insert sequence
          Length = 1099

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 2   tggcggcgaggaaggggcc 20
           |||||||||||||||||||
Sbjct: 288 tggcggcgaggaaggggcc 270
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>dbj|AK101796.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033066C05, full
           insert sequence
          Length = 1122

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 2   tggcggcgaggaaggggcc 20
           |||||||||||||||||||
Sbjct: 287 tggcggcgaggaaggggcc 269
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>dbj|AK061243.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-D04, full
           insert sequence
          Length = 1103

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 2   tggcggcgaggaaggggcc 20
           |||||||||||||||||||
Sbjct: 289 tggcggcgaggaaggggcc 271
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>emb|AL928835.6| Zebrafish DNA sequence from clone CH211-201P7 in linkage group 1,
             complete sequence
          Length = 182427

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 7     gcgaggaaggggccgtgga 25
             |||||||||||||||||||
Sbjct: 85044 gcgaggaaggggccgtgga 85062


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 705,777
Number of Sequences: 3902068
Number of extensions: 705777
Number of successful extensions: 39371
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 39091
Number of HSP's gapped (non-prelim): 280
length of query: 149
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 128
effective length of database: 17,151,101,840
effective search space: 2195341035520
effective search space used: 2195341035520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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