ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags33c22 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009621.1| Triticum aestivum clone wre1n.pk0134.h7:fis, full insert mRNA sequence Length = 1608 Score = 1041 bits (525), Expect = 0.0 Identities = 592/613 (96%), Gaps = 1/613 (0%) Strand = Plus / Plus Query: 2 ctcggccgcttctcctcccacctcaagnatcggaatcgtcgggttacccaatgttggcaa 61 ||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 166 ctcggccgcttctcctcgcacctcaag-atcggaatcgttgggttacccaatgttggcaa 224 Query: 62 atcaactttcttcaacatagtaacgaagttgtccattccggccgagaacttcccattctg 121 |||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||| Sbjct: 225 atcaactttcttcaacatagtaacaaagttgtccatcccggctgagaacttcccattctg 284 Query: 122 taccattgaaccaaatgaggcacgggtgcatgttccggacgaacgatttgactggctttg 181 ||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||| Sbjct: 285 taccattgaaccaaatgaggcacgggtacatgttccggatgaacgatttgactatctttg 344 Query: 182 ccaacttttcaagccaaagagtgaggtggctgcatatctggaaatcaacgacatagccgg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 345 ccaacttttcaagccaaagagtgaggtggctgcatatctggaaatcaacgacatagccgg 404 Query: 242 tcttgttagaggagcaagtgcaggggagggtctgggcaatgccttcttatcccatatacg 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 405 gcttgttagaggagcaagtgcaggggagggtctgggcaatgccttcttatcccatatacg 464 Query: 302 tgctgttgatggaatctttcatgtcttgagagcatttgaagacaaggaaatcactcatat 361 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 465 tgctgttgatggaatctttcatgtcttgagagcatttgaagacacggaaatcacccatat 524 Query: 362 tgatgatacagttgatcctgttcgtgatttggaaactattagtcacgaactgaggctcaa 421 ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| Sbjct: 525 tgatgatacagttgatcctgttcgtgatttggaaactattactcaagaactgaggctcaa 584 Query: 422 ggatatagagtttgtgcaggctaaaattgatgaccttgagaagtcaatgaagaggagcaa 481 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 585 ggatatagagtttgtgcaggctaaaattgatgaccttgagaaggcaatgaagaggagcaa 644 Query: 482 tgacaagcaacttaagatagaccatgaattatgtcagaggatcatggcacatctccaaga 541 |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 645 tgacaagcaacttaagatagaccatgaattatgtcagaggatcatgacacatcttcaaga 704 Query: 542 cgggaaagatgtacgtttaggggaatggaaagctgctgaaattgagatcttgaatacctt 601 ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 705 cgggaaagacctacgtttaggagaatggaaagctgctgaaattgagatcttgaatacctt 764 Query: 602 tcagctgcttact 614 ||||||||||||| Sbjct: 765 tcagctgcttact 777
>gb|AY135021.1| Triticum aestivum GTP-binding protein mRNA, complete cds Length = 1143 Score = 664 bits (335), Expect = 0.0 Identities = 356/363 (98%) Strand = Plus / Plus Query: 252 ggagcaagtgcaggggagggtctgggcaatgccttcttatcccatatacgtgctgttgat 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ggagcaagtgcaggggagggtctgggcaatgccttcttatcccatatacgtgctgttgat 60 Query: 312 ggaatctttcatgtcttgagagcatttgaagacaaggaaatcactcatattgatgataca 371 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 61 ggaatctttcatgtcttgagagcatttgaagacacggaaatcactcatattgatgataca 120 Query: 372 gttgatcctgttcgtgatttggaaactattagtcacgaactgaggctcaaggatatagag 431 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 121 gttgatcctgttcgtgatttggaaactattagtcaagaactgaggctcaaggatatagag 180 Query: 432 tttgtgcaggctaaaattgatgaccttgagaagtcaatgaagaggagcaatgacaagcaa 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tttgtgcaggctaaaattgatgaccttgagaagtcaatgaagaggagcaatgacaagcaa 240 Query: 492 cttaagatagaccatgaattatgtcagaggatcatggcacatctccaagacgggaaagat 551 |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 241 cttaagatagaccatgaattatgtcagagggtcatggcacatctccaagacaggaaagac 300 Query: 552 gtacgtttaggggaatggaaagctgctgaaattgagatcttgaatacctttcagctgctt 611 ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 301 gtacgtttaggagaatggaaagctgctgaaattgagatcttgaatgcctttcagctgctt 360 Query: 612 act 614 ||| Sbjct: 361 act 363
>dbj|AK062256.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-G08, full insert sequence Length = 1599 Score = 547 bits (276), Expect = e-152 Identities = 529/612 (86%), Gaps = 1/612 (0%) Strand = Plus / Plus Query: 2 ctcggccgcttctcctcccacctcaagnatcggaatcgtcgggttacccaatgttggcaa 61 ||||||||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 163 ctcggccgcttctcctcccacctcaag-atcgggatcgttgggttaccaaatgttggcaa 221 Query: 62 atcaactttcttcaacatagtaacgaagttgtccattccggccgagaacttcccattctg 121 ||| |||||||||||||||||||| ||| |||| || || || ||||||||||| ||||| Sbjct: 222 atccactttcttcaacatagtaacaaagctgtctatcccagctgagaacttccctttctg 281 Query: 122 taccattgaaccaaatgaggcacgggtgcatgttccggacgaacgatttgactggctttg 181 |||||| || ||||||||||||||||| ||||||| || || ||||||| |||||||| Sbjct: 282 taccatcgacccaaatgaggcacgggtatatgttccagatgagagatttgattggctttg 341 Query: 182 ccaacttttcaagccaaagagtgaggtggctgcatatctggaaatcaacgacatagccgg 241 ||||||| ||||||||||||||||||| |||||||||| |||||||| ||||||||||| Sbjct: 342 tcaactttacaagccaaagagtgaggtgtctgcatatctagaaatcaatgacatagccgg 401 Query: 242 tcttgttagaggagcaagtgcaggggagggtctgggcaatgccttcttatcccatatacg 301 |||||||||||||| ||| ||||||||| |||||||||||||| ||||||||||||| Sbjct: 402 gcttgttagaggagcccatgctggggagggtttgggcaatgccttcctatcccatatacg 461 Query: 302 tgctgttgatggaatctttcatgtcttgagagcatttgaagacaaggaaatcactcatat 361 |||||||||||||| |||||||| |||||||||||||||||||| ||| | |||||||| Sbjct: 462 cgctgttgatggaatttttcatgtattgagagcatttgaagacaaagaagttactcatat 521 Query: 362 tgatgatacagttgatcctgttcgtgatttggaaactattagtcacgaactgaggctcaa 421 ||||||| |||| ||||||||| | ||||||||||||||| || | || ||||| ||||| Sbjct: 522 tgatgattcagtggatcctgttagagatttggaaactattggtgaagagctgagactcaa 581 Query: 422 ggatatagagtttgtgcaggctaaaattgatgaccttgagaagtcaatgaagaggagcaa 481 ||| || |||||||||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 582 ggacattgagtttgtgcagaacaaaattgatgaccttgagaaatcaatgaagagaagcaa 641 Query: 482 tgacaagcaacttaagatagaccatgaattatgtcagaggatcatggcacatctccaaga 541 ||| ||||| || || | || |||||||||||| ||| | ||| || ||||| |||| Sbjct: 642 tgataagcagctgaaactcgagcatgaattatgtgagaaggtcaaagcccatcttgaaga 701 Query: 542 cgggaaagatgtacgtttaggggaatggaaagctgctgaaattgagatcttgaatacctt 601 || || ||||| || || || || |||||| |||||| |||||||||||||||||||| Sbjct: 702 tggaaaggatgtccgctttggagattggaaaagtgctgacattgagatcttgaatacctt 761 Query: 602 tcagctgcttac 613 ||||| ||||| Sbjct: 762 ccagctacttac 773
>ref|XM_480550.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1533 Score = 539 bits (272), Expect = e-150 Identities = 528/612 (86%), Gaps = 1/612 (0%) Strand = Plus / Plus Query: 2 ctcggccgcttctcctcccacctcaagnatcggaatcgtcgggttacccaatgttggcaa 61 ||||||||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 141 ctcggccgcttctcctcccacctcaag-atcgggatcgttgggttaccaaatgttggcaa 199 Query: 62 atcaactttcttcaacatagtaacgaagttgtccattccggccgagaacttcccattctg 121 ||| |||||||| ||||||||||| ||| |||| || || || ||||||||||| ||||| Sbjct: 200 atccactttctttaacatagtaacaaagctgtctatcccagctgagaacttccctttctg 259 Query: 122 taccattgaaccaaatgaggcacgggtgcatgttccggacgaacgatttgactggctttg 181 |||||| || ||||||||||||||||| ||||||| || || ||||||| |||||||| Sbjct: 260 taccatcgacccaaatgaggcacgggtatatgttccagatgagagatttgattggctttg 319 Query: 182 ccaacttttcaagccaaagagtgaggtggctgcatatctggaaatcaacgacatagccgg 241 ||||||| ||||||||||||||||||| |||||||||| |||||||| ||||||||||| Sbjct: 320 tcaactttacaagccaaagagtgaggtgtctgcatatctagaaatcaatgacatagccgg 379 Query: 242 tcttgttagaggagcaagtgcaggggagggtctgggcaatgccttcttatcccatatacg 301 |||||||||||||| ||| ||||||||| |||||||||||||| ||||||||||||| Sbjct: 380 gcttgttagaggagcccatgctggggagggtttgggcaatgccttcctatcccatatacg 439 Query: 302 tgctgttgatggaatctttcatgtcttgagagcatttgaagacaaggaaatcactcatat 361 |||||||||||||| |||||||| |||||||||||||||||||| ||| | |||||||| Sbjct: 440 cgctgttgatggaatttttcatgtattgagagcatttgaagacaaagaagttactcatat 499 Query: 362 tgatgatacagttgatcctgttcgtgatttggaaactattagtcacgaactgaggctcaa 421 ||||||| |||| ||||||||| | ||||||||||||||| || | || ||||| ||||| Sbjct: 500 tgatgattcagtggatcctgttagagatttggaaactattggtgaagagctgagactcaa 559 Query: 422 ggatatagagtttgtgcaggctaaaattgatgaccttgagaagtcaatgaagaggagcaa 481 ||| || |||||||||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 560 ggacattgagtttgtgcagaacaaaattgatgaccttgagaaatcaatgaagagaagcaa 619 Query: 482 tgacaagcaacttaagatagaccatgaattatgtcagaggatcatggcacatctccaaga 541 ||| ||||| || || | || |||||||||||| ||| | ||| || ||||| |||| Sbjct: 620 tgataagcagctgaaactcgagcatgaattatgtgagaaggtcaaagcccatcttgaaga 679 Query: 542 cgggaaagatgtacgtttaggggaatggaaagctgctgaaattgagatcttgaatacctt 601 || || ||||| || || || || |||||| |||||| |||||||||||||||||||| Sbjct: 680 tggaaaggatgtccgctttggagattggaaaagtgctgacattgagatcttgaatacctt 739 Query: 602 tcagctgcttac 613 ||||| ||||| Sbjct: 740 ccagctacttac 751
>ref|XM_507572.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0094P23.28 mRNA Length = 1594 Score = 539 bits (272), Expect = e-150 Identities = 528/612 (86%), Gaps = 1/612 (0%) Strand = Plus / Plus Query: 2 ctcggccgcttctcctcccacctcaagnatcggaatcgtcgggttacccaatgttggcaa 61 ||||||||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 158 ctcggccgcttctcctcccacctcaag-atcgggatcgttgggttaccaaatgttggcaa 216 Query: 62 atcaactttcttcaacatagtaacgaagttgtccattccggccgagaacttcccattctg 121 ||| |||||||| ||||||||||| ||| |||| || || || ||||||||||| ||||| Sbjct: 217 atccactttctttaacatagtaacaaagctgtctatcccagctgagaacttccctttctg 276 Query: 122 taccattgaaccaaatgaggcacgggtgcatgttccggacgaacgatttgactggctttg 181 |||||| || ||||||||||||||||| ||||||| || || ||||||| |||||||| Sbjct: 277 taccatcgacccaaatgaggcacgggtatatgttccagatgagagatttgattggctttg 336 Query: 182 ccaacttttcaagccaaagagtgaggtggctgcatatctggaaatcaacgacatagccgg 241 ||||||| ||||||||||||||||||| |||||||||| |||||||| ||||||||||| Sbjct: 337 tcaactttacaagccaaagagtgaggtgtctgcatatctagaaatcaatgacatagccgg 396 Query: 242 tcttgttagaggagcaagtgcaggggagggtctgggcaatgccttcttatcccatatacg 301 |||||||||||||| ||| ||||||||| |||||||||||||| ||||||||||||| Sbjct: 397 gcttgttagaggagcccatgctggggagggtttgggcaatgccttcctatcccatatacg 456 Query: 302 tgctgttgatggaatctttcatgtcttgagagcatttgaagacaaggaaatcactcatat 361 |||||||||||||| |||||||| |||||||||||||||||||| ||| | |||||||| Sbjct: 457 cgctgttgatggaatttttcatgtattgagagcatttgaagacaaagaagttactcatat 516 Query: 362 tgatgatacagttgatcctgttcgtgatttggaaactattagtcacgaactgaggctcaa 421 ||||||| |||| ||||||||| | ||||||||||||||| || | || ||||| ||||| Sbjct: 517 tgatgattcagtggatcctgttagagatttggaaactattggtgaagagctgagactcaa 576 Query: 422 ggatatagagtttgtgcaggctaaaattgatgaccttgagaagtcaatgaagaggagcaa 481 ||| || |||||||||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 577 ggacattgagtttgtgcagaacaaaattgatgaccttgagaaatcaatgaagagaagcaa 636 Query: 482 tgacaagcaacttaagatagaccatgaattatgtcagaggatcatggcacatctccaaga 541 ||| ||||| || || | || |||||||||||| ||| | ||| || ||||| |||| Sbjct: 637 tgataagcagctgaaactcgagcatgaattatgtgagaaggtcaaagcccatcttgaaga 696 Query: 542 cgggaaagatgtacgtttaggggaatggaaagctgctgaaattgagatcttgaatacctt 601 || || ||||| || || || || |||||| |||||| |||||||||||||||||||| Sbjct: 697 tggaaaggatgtccgctttggagattggaaaagtgctgacattgagatcttgaatacctt 756 Query: 602 tcagctgcttac 613 ||||| ||||| Sbjct: 757 ccagctacttac 768
>ref|XM_507162.2| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0094P23.28 mRNA Length = 1551 Score = 539 bits (272), Expect = e-150 Identities = 528/612 (86%), Gaps = 1/612 (0%) Strand = Plus / Plus Query: 2 ctcggccgcttctcctcccacctcaagnatcggaatcgtcgggttacccaatgttggcaa 61 ||||||||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 159 ctcggccgcttctcctcccacctcaag-atcgggatcgttgggttaccaaatgttggcaa 217 Query: 62 atcaactttcttcaacatagtaacgaagttgtccattccggccgagaacttcccattctg 121 ||| |||||||| ||||||||||| ||| |||| || || || ||||||||||| ||||| Sbjct: 218 atccactttctttaacatagtaacaaagctgtctatcccagctgagaacttccctttctg 277 Query: 122 taccattgaaccaaatgaggcacgggtgcatgttccggacgaacgatttgactggctttg 181 |||||| || ||||||||||||||||| ||||||| || || ||||||| |||||||| Sbjct: 278 taccatcgacccaaatgaggcacgggtatatgttccagatgagagatttgattggctttg 337 Query: 182 ccaacttttcaagccaaagagtgaggtggctgcatatctggaaatcaacgacatagccgg 241 ||||||| ||||||||||||||||||| |||||||||| |||||||| ||||||||||| Sbjct: 338 tcaactttacaagccaaagagtgaggtgtctgcatatctagaaatcaatgacatagccgg 397 Query: 242 tcttgttagaggagcaagtgcaggggagggtctgggcaatgccttcttatcccatatacg 301 |||||||||||||| ||| ||||||||| |||||||||||||| ||||||||||||| Sbjct: 398 gcttgttagaggagcccatgctggggagggtttgggcaatgccttcctatcccatatacg 457 Query: 302 tgctgttgatggaatctttcatgtcttgagagcatttgaagacaaggaaatcactcatat 361 |||||||||||||| |||||||| |||||||||||||||||||| ||| | |||||||| Sbjct: 458 cgctgttgatggaatttttcatgtattgagagcatttgaagacaaagaagttactcatat 517 Query: 362 tgatgatacagttgatcctgttcgtgatttggaaactattagtcacgaactgaggctcaa 421 ||||||| |||| ||||||||| | ||||||||||||||| || | || ||||| ||||| Sbjct: 518 tgatgattcagtggatcctgttagagatttggaaactattggtgaagagctgagactcaa 577 Query: 422 ggatatagagtttgtgcaggctaaaattgatgaccttgagaagtcaatgaagaggagcaa 481 ||| || |||||||||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 578 ggacattgagtttgtgcagaacaaaattgatgaccttgagaaatcaatgaagagaagcaa 637 Query: 482 tgacaagcaacttaagatagaccatgaattatgtcagaggatcatggcacatctccaaga 541 ||| ||||| || || | || |||||||||||| ||| | ||| || ||||| |||| Sbjct: 638 tgataagcagctgaaactcgagcatgaattatgtgagaaggtcaaagcccatcttgaaga 697 Query: 542 cgggaaagatgtacgtttaggggaatggaaagctgctgaaattgagatcttgaatacctt 601 || || ||||| || || || || |||||| |||||| |||||||||||||||||||| Sbjct: 698 tggaaaggatgtccgctttggagattggaaaagtgctgacattgagatcttgaatacctt 757 Query: 602 tcagctgcttac 613 ||||| ||||| Sbjct: 758 ccagctacttac 769
>dbj|AK121741.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085L09, full insert sequence Length = 1551 Score = 539 bits (272), Expect = e-150 Identities = 528/612 (86%), Gaps = 1/612 (0%) Strand = Plus / Plus Query: 2 ctcggccgcttctcctcccacctcaagnatcggaatcgtcgggttacccaatgttggcaa 61 ||||||||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 159 ctcggccgcttctcctcccacctcaag-atcgggatcgttgggttaccaaatgttggcaa 217 Query: 62 atcaactttcttcaacatagtaacgaagttgtccattccggccgagaacttcccattctg 121 ||| |||||||| ||||||||||| ||| |||| || || || ||||||||||| ||||| Sbjct: 218 atccactttctttaacatagtaacaaagctgtctatcccagctgagaacttccctttctg 277 Query: 122 taccattgaaccaaatgaggcacgggtgcatgttccggacgaacgatttgactggctttg 181 |||||| || ||||||||||||||||| ||||||| || || ||||||| |||||||| Sbjct: 278 taccatcgacccaaatgaggcacgggtatatgttccagatgagagatttgattggctttg 337 Query: 182 ccaacttttcaagccaaagagtgaggtggctgcatatctggaaatcaacgacatagccgg 241 ||||||| ||||||||||||||||||| |||||||||| |||||||| ||||||||||| Sbjct: 338 tcaactttacaagccaaagagtgaggtgtctgcatatctagaaatcaatgacatagccgg 397 Query: 242 tcttgttagaggagcaagtgcaggggagggtctgggcaatgccttcttatcccatatacg 301 |||||||||||||| ||| ||||||||| |||||||||||||| ||||||||||||| Sbjct: 398 gcttgttagaggagcccatgctggggagggtttgggcaatgccttcctatcccatatacg 457 Query: 302 tgctgttgatggaatctttcatgtcttgagagcatttgaagacaaggaaatcactcatat 361 |||||||||||||| |||||||| |||||||||||||||||||| ||| | |||||||| Sbjct: 458 cgctgttgatggaatttttcatgtattgagagcatttgaagacaaagaagttactcatat 517 Query: 362 tgatgatacagttgatcctgttcgtgatttggaaactattagtcacgaactgaggctcaa 421 ||||||| |||| ||||||||| | ||||||||||||||| || | || ||||| ||||| Sbjct: 518 tgatgattcagtggatcctgttagagatttggaaactattggtgaagagctgagactcaa 577 Query: 422 ggatatagagtttgtgcaggctaaaattgatgaccttgagaagtcaatgaagaggagcaa 481 ||| || |||||||||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 578 ggacattgagtttgtgcagaacaaaattgatgaccttgagaaatcaatgaagagaagcaa 637 Query: 482 tgacaagcaacttaagatagaccatgaattatgtcagaggatcatggcacatctccaaga 541 ||| ||||| || || | || |||||||||||| ||| | ||| || ||||| |||| Sbjct: 638 tgataagcagctgaaactcgagcatgaattatgtgagaaggtcaaagcccatcttgaaga 697 Query: 542 cgggaaagatgtacgtttaggggaatggaaagctgctgaaattgagatcttgaatacctt 601 || || ||||| || || || || |||||| |||||| |||||||||||||||||||| Sbjct: 698 tggaaaggatgtccgctttggagattggaaaagtgctgacattgagatcttgaatacctt 757 Query: 602 tcagctgcttac 613 ||||| ||||| Sbjct: 758 ccagctacttac 769
>dbj|AK098917.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002L20, full insert sequence Length = 1533 Score = 539 bits (272), Expect = e-150 Identities = 528/612 (86%), Gaps = 1/612 (0%) Strand = Plus / Plus Query: 2 ctcggccgcttctcctcccacctcaagnatcggaatcgtcgggttacccaatgttggcaa 61 ||||||||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 141 ctcggccgcttctcctcccacctcaag-atcgggatcgttgggttaccaaatgttggcaa 199 Query: 62 atcaactttcttcaacatagtaacgaagttgtccattccggccgagaacttcccattctg 121 ||| |||||||| ||||||||||| ||| |||| || || || ||||||||||| ||||| Sbjct: 200 atccactttctttaacatagtaacaaagctgtctatcccagctgagaacttccctttctg 259 Query: 122 taccattgaaccaaatgaggcacgggtgcatgttccggacgaacgatttgactggctttg 181 |||||| || ||||||||||||||||| ||||||| || || ||||||| |||||||| Sbjct: 260 taccatcgacccaaatgaggcacgggtatatgttccagatgagagatttgattggctttg 319 Query: 182 ccaacttttcaagccaaagagtgaggtggctgcatatctggaaatcaacgacatagccgg 241 ||||||| ||||||||||||||||||| |||||||||| |||||||| ||||||||||| Sbjct: 320 tcaactttacaagccaaagagtgaggtgtctgcatatctagaaatcaatgacatagccgg 379 Query: 242 tcttgttagaggagcaagtgcaggggagggtctgggcaatgccttcttatcccatatacg 301 |||||||||||||| ||| ||||||||| |||||||||||||| ||||||||||||| Sbjct: 380 gcttgttagaggagcccatgctggggagggtttgggcaatgccttcctatcccatatacg 439 Query: 302 tgctgttgatggaatctttcatgtcttgagagcatttgaagacaaggaaatcactcatat 361 |||||||||||||| |||||||| |||||||||||||||||||| ||| | |||||||| Sbjct: 440 cgctgttgatggaatttttcatgtattgagagcatttgaagacaaagaagttactcatat 499 Query: 362 tgatgatacagttgatcctgttcgtgatttggaaactattagtcacgaactgaggctcaa 421 ||||||| |||| ||||||||| | ||||||||||||||| || | || ||||| ||||| Sbjct: 500 tgatgattcagtggatcctgttagagatttggaaactattggtgaagagctgagactcaa 559 Query: 422 ggatatagagtttgtgcaggctaaaattgatgaccttgagaagtcaatgaagaggagcaa 481 ||| || |||||||||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 560 ggacattgagtttgtgcagaacaaaattgatgaccttgagaaatcaatgaagagaagcaa 619 Query: 482 tgacaagcaacttaagatagaccatgaattatgtcagaggatcatggcacatctccaaga 541 ||| ||||| || || | || |||||||||||| ||| | ||| || ||||| |||| Sbjct: 620 tgataagcagctgaaactcgagcatgaattatgtgagaaggtcaaagcccatcttgaaga 679 Query: 542 cgggaaagatgtacgtttaggggaatggaaagctgctgaaattgagatcttgaatacctt 601 || || ||||| || || || || |||||| |||||| |||||||||||||||||||| Sbjct: 680 tggaaaggatgtccgctttggagattggaaaagtgctgacattgagatcttgaatacctt 739 Query: 602 tcagctgcttac 613 ||||| ||||| Sbjct: 740 ccagctacttac 751
>gb|AY105761.1| Zea mays PCO136937 mRNA sequence Length = 1586 Score = 430 bits (217), Expect = e-117 Identities = 507/601 (84%), Gaps = 2/601 (0%) Strand = Plus / Plus Query: 8 cgcttctcctcccacctcaagnatcggaatcgtcgggttacccaatgttggcaaatcaac 67 ||||||||||||||||||||| ||||| ||||| ||||| || ||||||||||||||||| Sbjct: 197 cgcttctcctcccacctcaag-atcgggatcgttgggttgccaaatgttggcaaatcaac 255 Query: 68 tttctt-caacatagtaacgaagttgtccattccggccgagaacttcccattctgtacca 126 ||| || ||||||||||||||||||| | || || || ||||| || || |||||||||| Sbjct: 256 tttttttcaacatagtaacgaagttggctatcccagctgagaattttcctttctgtacca 315 Query: 127 ttgaaccaaatgaggcacgggtgcatgttccggacgaacgatttgactggctttgccaac 186 | ||||||||||| ||||||||| ||||||| || ||||| ||||| ||||||||| ||| Sbjct: 316 tcgaaccaaatgaagcacgggtgaatgttccagatgaacggtttgattggctttgcaaac 375 Query: 187 ttttcaagccaaagagtgaggtggctgcatatctggaaatcaacgacatagccggtcttg 246 ||| ||||||||||||||||||| |||||||||| ||| | | |||||||| || ||| Sbjct: 376 tttacaagccaaagagtgaggtgcctgcatatcttgaagtaactgacatagctgggctta 435 Query: 247 ttagaggagcaagtgcaggggagggtctgggcaatgccttcttatcccatatacgtgctg 306 ||||||| || ||| ||||| |||||||||||||| ||| | || ||||||||||||| Sbjct: 436 ttagaggtgctcatgctggggatggtctgggcaatgcattcctctcacatatacgtgctg 495 Query: 307 ttgatggaatctttcatgtcttgagagcatttgaagacaaggaaatcactcatattgatg 366 ||||||||||||| |||||| | ||||||||||||||| ||||| |||||| |||| | Sbjct: 496 ttgatggaatcttccatgtcctaagagcatttgaagacgcagaaattactcatgttgacg 555 Query: 367 atacagttgatcctgttcgtgatttggaaactattagtcacgaactgaggctcaaggata 426 ||||||| ||||||||| | || |||||||||||||| | || || || || ||||||| Sbjct: 556 atacagtagatcctgttagagacatggaaactattagtgaagagctcagactaaaggata 615 Query: 427 tagagtttgtgcaggctaaaattgatgaccttgagaagtcaatgaagaggagcaatgaca 486 ||||||| || | ||| |||| |||||||| ||||||||||||||||||||||| | Sbjct: 616 tagagttcatgaaaaagaaacttgaggaccttgataagtcaatgaagaggagcaatgata 675 Query: 487 agcaacttaagatagaccatgaattatgtcagaggatcatggcacatctccaagacggga 546 |||| || || || || |||||||||||| ||||| |||| | ||||| | || |||| Sbjct: 676 agcagctcaaaattgagcatgaattatgtgagagggtcataggccatcttgaggaaggga 735 Query: 547 aagatgtacgtttaggggaatggaaagctgctgaaattgagatcttgaatacctttcagc 606 ||||||| |||||||| || |||||||||||||| ||||||||||||||||| || |||| Sbjct: 736 aagatgtccgtttaggagattggaaagctgctgacattgagatcttgaatacattccagc 795 Query: 607 t 607 | Sbjct: 796 t 796
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 165 bits (83), Expect = 2e-37 Identities = 146/167 (87%) Strand = Plus / Plus Query: 42 gggttacccaatgttggcaaatcaactttcttcaacatagtaacgaagttgtccattccg 101 |||||||| |||||||||||||| |||||||| ||||||||||| ||| |||| || || Sbjct: 5741494 gggttaccaaatgttggcaaatccactttctttaacatagtaacaaagctgtctatccca 5741553 Query: 102 gccgagaacttcccattctgtaccattgaaccaaatgaggcacgggtgcatgttccggac 161 || ||||||||||| ||||||||||| || ||||||||||||||||| ||||||| || Sbjct: 5741554 gctgagaacttccctttctgtaccatcgacccaaatgaggcacgggtatatgttccagat 5741613 Query: 162 gaacgatttgactggctttgccaacttttcaagccaaagagtgaggt 208 || ||||||| |||||||| ||||||| |||||||||||||||||| Sbjct: 5741614 gagagatttgattggctttgtcaactttacaagccaaagagtgaggt 5741660 Score = 149 bits (75), Expect = 1e-32 Identities = 114/127 (89%) Strand = Plus / Plus Query: 205 aggtggctgcatatctggaaatcaacgacatagccggtcttgttagaggagcaagtgcag 264 ||||| |||||||||| |||||||| ||||||||||| |||||||||||||| ||| | Sbjct: 5741739 aggtgtctgcatatctagaaatcaatgacatagccgggcttgttagaggagcccatgctg 5741798 Query: 265 gggagggtctgggcaatgccttcttatcccatatacgtgctgttgatggaatctttcatg 324 |||||||| |||||||||||||| ||||||||||||| |||||||||||||| ||||||| Sbjct: 5741799 gggagggtttgggcaatgccttcctatcccatatacgcgctgttgatggaatttttcatg 5741858 Query: 325 tcttgag 331 | ||||| Sbjct: 5741859 tattgag 5741865 Score = 89.7 bits (45), Expect = 1e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 331 gagcatttgaagacaaggaaatcactcatattgatgatacagttgatcctgttcgtgatt 390 |||||||||||||||| ||| | ||||||||||||||| |||| ||||||||| | |||| Sbjct: 5742078 gagcatttgaagacaaagaagttactcatattgatgattcagtggatcctgttagagatt 5742137 Query: 391 tggaaactattagtcacgaactgaggctcaagg 423 ||||||||||| || | || ||||| ||||||| Sbjct: 5742138 tggaaactattggtgaagagctgagactcaagg 5742170 Score = 77.8 bits (39), Expect = 4e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 429 gagtttgtgcaggctaaaattgatgaccttgagaagtcaatgaagaggagcaatgacaag 488 |||||||||||| |||||||||||||||||||| ||||||||||| |||||||| ||| Sbjct: 5742260 gagtttgtgcagaacaaaattgatgaccttgagaaatcaatgaagagaagcaatgataag 5742319 Query: 489 caacttaagatagaccatgaattatgt 515 || || || | || |||||||||||| Sbjct: 5742320 cagctgaaactcgagcatgaattatgt 5742346 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 575 tgctgaaattgagatcttgaatacctttcagctgcttac 613 |||||| |||||||||||||||||||| ||||| ||||| Sbjct: 5742529 tgctgacattgagatcttgaataccttccagctacttac 5742567 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 2 ctcggccgcttctcctcccacctcaag 28 ||||||||||||||||||||||||||| Sbjct: 5740551 ctcggccgcttctcctcccacctcaag 5740577
>dbj|AP005416.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0094P23 Length = 149341 Score = 165 bits (83), Expect = 2e-37 Identities = 146/167 (87%) Strand = Plus / Plus Query: 42 gggttacccaatgttggcaaatcaactttcttcaacatagtaacgaagttgtccattccg 101 |||||||| |||||||||||||| |||||||| ||||||||||| ||| |||| || || Sbjct: 96119 gggttaccaaatgttggcaaatccactttctttaacatagtaacaaagctgtctatccca 96178 Query: 102 gccgagaacttcccattctgtaccattgaaccaaatgaggcacgggtgcatgttccggac 161 || ||||||||||| ||||||||||| || ||||||||||||||||| ||||||| || Sbjct: 96179 gctgagaacttccctttctgtaccatcgacccaaatgaggcacgggtatatgttccagat 96238 Query: 162 gaacgatttgactggctttgccaacttttcaagccaaagagtgaggt 208 || ||||||| |||||||| ||||||| |||||||||||||||||| Sbjct: 96239 gagagatttgattggctttgtcaactttacaagccaaagagtgaggt 96285 Score = 149 bits (75), Expect = 1e-32 Identities = 114/127 (89%) Strand = Plus / Plus Query: 205 aggtggctgcatatctggaaatcaacgacatagccggtcttgttagaggagcaagtgcag 264 ||||| |||||||||| |||||||| ||||||||||| |||||||||||||| ||| | Sbjct: 96364 aggtgtctgcatatctagaaatcaatgacatagccgggcttgttagaggagcccatgctg 96423 Query: 265 gggagggtctgggcaatgccttcttatcccatatacgtgctgttgatggaatctttcatg 324 |||||||| |||||||||||||| ||||||||||||| |||||||||||||| ||||||| Sbjct: 96424 gggagggtttgggcaatgccttcctatcccatatacgcgctgttgatggaatttttcatg 96483 Query: 325 tcttgag 331 | ||||| Sbjct: 96484 tattgag 96490 Score = 89.7 bits (45), Expect = 1e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 331 gagcatttgaagacaaggaaatcactcatattgatgatacagttgatcctgttcgtgatt 390 |||||||||||||||| ||| | ||||||||||||||| |||| ||||||||| | |||| Sbjct: 96703 gagcatttgaagacaaagaagttactcatattgatgattcagtggatcctgttagagatt 96762 Query: 391 tggaaactattagtcacgaactgaggctcaagg 423 ||||||||||| || | || ||||| ||||||| Sbjct: 96763 tggaaactattggtgaagagctgagactcaagg 96795 Score = 77.8 bits (39), Expect = 4e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 429 gagtttgtgcaggctaaaattgatgaccttgagaagtcaatgaagaggagcaatgacaag 488 |||||||||||| |||||||||||||||||||| ||||||||||| |||||||| ||| Sbjct: 96885 gagtttgtgcagaacaaaattgatgaccttgagaaatcaatgaagagaagcaatgataag 96944 Query: 489 caacttaagatagaccatgaattatgt 515 || || || | || |||||||||||| Sbjct: 96945 cagctgaaactcgagcatgaattatgt 96971 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 575 tgctgaaattgagatcttgaatacctttcagctgcttac 613 |||||| |||||||||||||||||||| ||||| ||||| Sbjct: 97154 tgctgacattgagatcttgaataccttccagctacttac 97192 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 2 ctcggccgcttctcctcccacctcaag 28 ||||||||||||||||||||||||||| Sbjct: 95176 ctcggccgcttctcctcccacctcaag 95202
>gb|AF108896.1|AF108896 Capsicum annuum GTP-binding protein mRNA, complete cds Length = 1557 Score = 75.8 bits (38), Expect = 2e-10 Identities = 146/182 (80%) Strand = Plus / Plus Query: 33 ggaatcgtcgggttacccaatgttggcaaatcaactttcttcaacatagtaacgaagttg 92 |||||||| || ||||| ||||| || || || ||| ||||||||| | | || ||||| Sbjct: 97 ggaatcgtaggattaccaaatgtggggaagtctactctcttcaacacactgacaaagtta 156 Query: 93 tccattccggccgagaacttcccattctgtaccattgaaccaaatgaggcacgggtgcat 152 ||||||||||| || ||||| || || ||||| || || || ||||| || || || || Sbjct: 157 tccattccggcagaaaactttcctttttgtactatcgagcctaatgaagctcgagtacac 216 Query: 153 gttccggacgaacgatttgactggctttgccaacttttcaagccaaagagtgaggtggct 212 || ||||| || || ||||| ||||| |||||||||| |||||| ||||| ||||||||| Sbjct: 217 gtgccggatgagcggtttgaatggctctgccaactttacaagcccaagagcgaggtggct 276 Query: 213 gc 214 || Sbjct: 277 gc 278 Score = 61.9 bits (31), Expect = 2e-06 Identities = 118/147 (80%) Strand = Plus / Plus Query: 468 atgaagaggagcaatgacaagcaacttaagatagaccatgaattatgtcagaggatcatg 527 |||||||| ||||||||||| ||| | || ||||| |||||||| |||| ||| ||| Sbjct: 532 atgaagagaagcaatgacaaacaattgaaaatagagcatgaattgtgtctaagggtcaaa 591 Query: 528 gcacatctccaagacgggaaagatgtacgtttaggggaatggaaagctgctgaaattgag 587 ||| ||| | || || |||||||| ||||| ||||| ||||||||||| || ||||| Sbjct: 592 gcatcactcgaggaaggcaaagatgttcgtttgggggactggaaagctgcagatattgaa 651 Query: 588 atcttgaatacctttcagctgcttact 614 | |||||||| || |||||||||||| Sbjct: 652 ttgttgaatactttccagctgcttact 678
>ref|NM_102795.2| Arabidopsis thaliana GTP binding AT1G30580 mRNA, complete cds Length = 1549 Score = 67.9 bits (34), Expect = 4e-08 Identities = 161/202 (79%), Gaps = 1/202 (0%) Strand = Plus / Plus Query: 5 ggccgcttctcctcccacctcaagnatcggaatcgtcgggttacccaatgttggcaaatc 64 ||||| ||||| || ||||||||| |||||||| || |||||||| |||||||| ||||| Sbjct: 139 ggccgtttctcttctcacctcaag-atcggaattgttgggttaccaaatgttggaaaatc 197 Query: 65 aactttcttcaacatagtaacgaagttgtccattccggccgagaacttcccattctgtac 124 ||| | ||||||| | || ||| | || ||||| || ||||| ||||| || ||||| Sbjct: 198 tactcttttcaacactcttacaaagctttcaattccagctgagaatttccccttttgtac 257 Query: 125 cattgaaccaaatgaggcacgggtgcatgttccggacgaacgatttgactggctttgcca 184 |||||| || ||||||||||| ||| || | || || || | || || ||||||||||| Sbjct: 258 cattgagcctaatgaggcacgtgtgaatatccccgatgagaggttcgattggctttgcca 317 Query: 185 acttttcaagccaaagagtgag 206 | || |||||| ||||||||| Sbjct: 318 aacttacaagcctaagagtgag 339 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 468 atgaagaggagcaatgacaagca 490 ||||||||||||||||||||||| Sbjct: 601 atgaagaggagcaatgacaagca 623
>gb|AY085845.1| Arabidopsis thaliana clone 18981 mRNA, complete sequence Length = 1497 Score = 67.9 bits (34), Expect = 4e-08 Identities = 161/202 (79%), Gaps = 1/202 (0%) Strand = Plus / Plus Query: 5 ggccgcttctcctcccacctcaagnatcggaatcgtcgggttacccaatgttggcaaatc 64 ||||| ||||| || ||||||||| |||||||| || |||||||| |||||||| ||||| Sbjct: 140 ggccgtttctcttctcacctcaag-atcggaattgttgggttaccaaatgttggaaaatc 198 Query: 65 aactttcttcaacatagtaacgaagttgtccattccggccgagaacttcccattctgtac 124 ||| | ||||||| | || ||| | || ||||| || ||||| ||||| || ||||| Sbjct: 199 tactcttttcaacactcttacaaagctttcaattccagctgagaatttccccttttgtac 258 Query: 125 cattgaaccaaatgaggcacgggtgcatgttccggacgaacgatttgactggctttgcca 184 |||||| || ||||||||||| ||| || | || || || | || || ||||||||||| Sbjct: 259 cattgagcctaatgaggcacgtgtgaatatccccgatgagaggttcgattggctttgcca 318 Query: 185 acttttcaagccaaagagtgag 206 | || |||||| ||||||||| Sbjct: 319 aacttacaagcctaagagtgag 340 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 468 atgaagaggagcaatgacaagca 490 ||||||||||||||||||||||| Sbjct: 602 atgaagaggagcaatgacaagca 624
>gb|AC007060.3|T5I8 Arabidopsis thaliana chromosome 1 BAC T5I8 sequence, complete sequence Length = 96183 Score = 54.0 bits (27), Expect = 6e-04 Identities = 132/167 (79%) Strand = Plus / Minus Query: 42 gggttacccaatgttggcaaatcaactttcttcaacatagtaacgaagttgtccattccg 101 |||||||| |||||||| ||||| ||| | ||||||| | || ||| | || ||||| Sbjct: 10282 gggttaccaaatgttggaaaatctactcttttcaacactcttacaaagctttcaattcca 10223 Query: 102 gccgagaacttcccattctgtaccattgaaccaaatgaggcacgggtgcatgttccggac 161 || ||||| ||||| || ||||||||||| || ||||||||||| ||| || | || || Sbjct: 10222 gctgagaatttccccttttgtaccattgagcctaatgaggcacgtgtgaatatccccgat 10163 Query: 162 gaacgatttgactggctttgccaacttttcaagccaaagagtgaggt 208 || | || || |||||||||||| || |||||| ||||||||||| Sbjct: 10162 gagaggttcgattggctttgccaaacttacaagcctaagagtgaggt 10116 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 468 atgaagaggagcaatgacaagca 490 ||||||||||||||||||||||| Sbjct: 9265 atgaagaggagcaatgacaagca 9243 Score = 44.1 bits (22), Expect = 0.54 Identities = 37/42 (88%) Strand = Plus / Minus Query: 284 cttcttatcccatatacgtgctgttgatggaatctttcatgt 325 |||||| |||||||| ||||| ||||||||||| || ||||| Sbjct: 9937 cttcttgtcccatattcgtgcagttgatggaattttccatgt 9896
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 100 cggccgagaacttcccattctgtaccattgaacc 133 |||||||||||||||| ||||| ||||||||||| Sbjct: 1183565 cggccgagaacttccccttctgcaccattgaacc 1183532
>emb|BX321862.1| Nitrosomonas europaea ATCC 19718, complete genome; segment 7/10 Length = 295250 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 33 ggaatcgtcgggttacccaatgttggcaaatcaacttt 70 ||||||||||| || ||||||||||||||||| ||||| Sbjct: 133578 ggaatcgtcggtttgcccaatgttggcaaatccacttt 133541
>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome Length = 1842899 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Minus Query: 47 acccaatgttggcaaatcaactttcttcaaca 78 ||||||||| ||||||||||||||| |||||| Sbjct: 801604 acccaatgtaggcaaatcaactttcatcaaca 801573
>dbj|AP006628.1| Onion yellows phytoplasma OY-M DNA, complete genome Length = 860631 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 cccaatgttggcaaatcaacttt 70 ||||||||||||||||||||||| Sbjct: 319564 cccaatgttggcaaatcaacttt 319586
>gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca coagulata), complete genome Length = 686194 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 108 aacttcccattctgtaccattgaacc 133 ||||||||||||||||| |||||||| Sbjct: 315060 aacttcccattctgtactattgaacc 315085
>gb|CP000061.1| Aster yellows witches'-broom phytoplasma AYWB, complete genome Length = 706569 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 cccaatgttggcaaatcaact 68 ||||||||||||||||||||| Sbjct: 508130 cccaatgttggcaaatcaact 508110
>gb|AC122540.4| Mus musculus BAC clone RP24-555K13 from chromosome 17, complete sequence Length = 149770 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 174 tggctttgccaacttttcaagccaa 198 ||||| ||||||||||||||||||| Sbjct: 117622 tggctctgccaacttttcaagccaa 117598
>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence Length = 3288558 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 108 aacttcccattctgtaccattgaaccaaa 136 |||||||| ||||||||||| |||||||| Sbjct: 775803 aacttcccgttctgtaccatcgaaccaaa 775775
>emb|Z93387.1|CET02E9 Caenorhabditis elegans Cosmid T02E9, complete sequence Length = 34263 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 369 acagttgatcctgttcgtgat 389 ||||||||||||||||||||| Sbjct: 1222 acagttgatcctgttcgtgat 1242
>gb|AE017143.1| Haemophilus ducreyi strain 35000HP complete genome Length = 1698955 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 36 atcgtcgggttacccaatgttggcaaatcaact 68 ||||| || |||||||||||||| ||||||||| Sbjct: 791485 atcgtaggtttacccaatgttggtaaatcaact 791453
>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete sequence Length = 2105742 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 gacgaacgatttgactggctttgc 182 ||||| |||||||||||||||||| Sbjct: 1490445 gacgagcgatttgactggctttgc 1490422
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 100 cggccgagaacttcccattctgtaccat 127 |||||||||||||||| ||||| ||||| Sbjct: 5359586 cggccgagaacttccccttctgcaccat 5359613
>ref|XM_421527.1| PREDICTED: Gallus gallus similar to hypothetical protein (LOC423644), mRNA Length = 12726 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 gaacttcccattctgtacca 126 |||||||||||||||||||| Sbjct: 2260 gaacttcccattctgtacca 2241
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 100 cggccgagaacttcccattctgtaccat 127 |||||||||||||||| ||||| ||||| Sbjct: 1077509 cggccgagaacttccccttctgcaccat 1077482
>gb|AC136363.2| Homo sapiens chromosome 17, clone RP11-18L18, complete sequence Length = 87532 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 cccattctgtaccattgaac 132 |||||||||||||||||||| Sbjct: 44897 cccattctgtaccattgaac 44916
>emb|AL953901.15| Zebrafish DNA sequence from clone CH211-207G22 in linkage group 3, complete sequence Length = 196773 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 570 aaagctgctgaaattgagat 589 |||||||||||||||||||| Sbjct: 2130 aaagctgctgaaattgagat 2149
>emb|CR450718.10| Zebrafish DNA sequence from clone CH211-246I5 in linkage group 3, complete sequence Length = 151291 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 570 aaagctgctgaaattgagat 589 |||||||||||||||||||| Sbjct: 47109 aaagctgctgaaattgagat 47128
>ref|XM_569779.1| Cryptococcus neoformans var. neoformans JEC21 cytoplasm protein (CNC04930) partial mRNA Length = 1447 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 gacgaacgatttgactggctttgc 182 ||||| |||||||||||||||||| Sbjct: 389 gacgagcgatttgactggctttgc 412
>gb|AC161399.2| Medicago truncatula chromosome 2 BAC clone mte1-30k4, complete sequence Length = 172016 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 aggtggctgcatatctggaaatca 228 |||||||||||||| ||||||||| Sbjct: 64493 aggtggctgcatatatggaaatca 64470
>gb|AC139601.8| Medicago truncatula clone mth2-8h11, complete sequence Length = 126204 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 aggtggctgcatatctggaaatca 228 |||||||||||||| ||||||||| Sbjct: 123620 aggtggctgcatatatggaaatca 123643
>ref|XM_792116.1| PREDICTED: Strongylocentrotus purpuratus similar to CG1354-PA, isoform A (LOC592602), mRNA Length = 1185 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 45 ttacccaatgttggcaaatcaactttcttcaa 76 ||||| |||||||| ||||| ||||||||||| Sbjct: 88 ttaccaaatgttgggaaatccactttcttcaa 119
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 100 cggccgagaacttcccattctgtaccat 127 |||||||||||||||| ||||| ||||| Sbjct: 5926983 cggccgagaacttccccttctgcaccat 5927010
>gb|AC100868.2| Homo sapiens chromosome 8, clone RP11-246K8, complete sequence Length = 160939 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 507 gaattatgtcagaggatcatggca 530 |||||||| ||||||||||||||| Sbjct: 132985 gaattatggcagaggatcatggca 132962
>gb|BC109713.1| Bos taurus glutathione synthetase, mRNA (cDNA clone MGC:134298 IMAGE:8065103), complete cds Length = 1904 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 ggtctgggcaatgccttctt 289 |||||||||||||||||||| Sbjct: 392 ggtctgggcaatgccttctt 373
>gb|AC016907.6| Homo sapiens BAC clone RP11-439P4 from 2, complete sequence Length = 202827 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 425 tatagagtttgtgcaggctaaaat 448 |||||| ||||||||||||||||| Sbjct: 140260 tatagaatttgtgcaggctaaaat 140283
>ref|NM_001015630.1| Bos taurus glutathione synthetase (GSS), mRNA Length = 1932 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 ggtctgggcaatgccttctt 289 |||||||||||||||||||| Sbjct: 436 ggtctgggcaatgccttctt 417
>gb|AC131274.9| Homo sapiens chromosome 17, clone RP11-285M22, complete sequence Length = 158329 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 cccattctgtaccattgaac 132 |||||||||||||||||||| Sbjct: 62399 cccattctgtaccattgaac 62418
>emb|BX088724.6| Zebrafish DNA sequence from clone DKEY-15G22, complete sequence Length = 198368 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 tctgggcaatgccttcttat 291 |||||||||||||||||||| Sbjct: 81022 tctgggcaatgccttcttat 81003
>gb|BT020647.1| Bos taurus glutathione synthetase (GSS), mRNA, complete cds Length = 1932 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 ggtctgggcaatgccttctt 289 |||||||||||||||||||| Sbjct: 436 ggtctgggcaatgccttctt 417
>emb|AM233362.1| Francisella tularensis subsp. holarctica strain LVS complete genome Length = 1895994 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 ttacccaatgttggcaaatcaact 68 ||||| |||||||||||||||||| Sbjct: 924284 ttaccaaatgttggcaaatcaact 924261
>emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4 complete genome Length = 1892819 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 ttacccaatgttggcaaatcaact 68 ||||| |||||||||||||||||| Sbjct: 697665 ttaccaaatgttggcaaatcaact 697642
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 111 ttcccattctgtaccattgaaccaaatg 138 |||||||||||||| ||||| ||||||| Sbjct: 1135010 ttcccattctgtacgattgagccaaatg 1134983 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,565,132 Number of Sequences: 3902068 Number of extensions: 5565132 Number of successful extensions: 107011 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 48 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 106705 Number of HSP's gapped (non-prelim): 290 length of query: 614 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 591 effective length of database: 17,143,297,704 effective search space: 10131688943064 effective search space used: 10131688943064 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
