ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags32n22 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK122040.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113E02, full insert sequence Length = 3137 Score = 331 bits (167), Expect = 2e-87 Identities = 490/596 (82%), Gaps = 4/596 (0%) Strand = Plus / Plus Query: 2 cagaaagtctgcactttgttgaggttgttggatngg-ctctcgtgtccctgcagtaatga 60 |||||| | |||||||||||||||||||||||| || ||||||||| |||||| |||| | Sbjct: 1169 cagaaaatgtgcactttgttgaggttgttggatcgggctctcgtgttcctgcaataatca 1228 Query: 61 agataattactgaattctttggaaaagaaccaaggagaactatgaatgcaagtgaatgtg 120 |||||| |||||||| |||||||| ||||| ||||| |||||||||||||||||||||| Sbjct: 1229 ggataatcactgaattttttggaaaggaaccgaggaggactatgaatgcaagtgaatgtg 1288 Query: 121 ttgccaggggatgtgctctccagtgtgctattcttagcccgacatttaaagtgcgggagt 180 ||||| ||||||| ||||| ||||||||| |||||||||| || || ||||| ||||| | Sbjct: 1289 ttgcccggggatgcgctcttcagtgtgctgttcttagccccactttcaaagtccgggaat 1348 Query: 181 ttcaggttaatgaaggttttcctttttcagttgctttatcatggaagccagatgctcagg 240 || |||| ||||| || || || |||||| ||||||| ||||| || || ||| || || Sbjct: 1349 ttgaggtcaatgatgggttcccgttttcaattgctttgtcatgcaaaccggattctgaga 1408 Query: 241 acaatgaatcccaacaaactgttgtattccccaaggggaatccaatgcctagcatcaagg 300 ||| ||||||| |||| ||| | || ||||| || || | |||| | ||||| ||| Sbjct: 1409 acactgaatccgaacagactatcgtgttcccaaaaggaagtccagtccctagtgccaaaa 1468 Query: 301 ctctgaccttctataggtccagtacatttgcagtggatgttttgaatgttgacacagatg 360 || |||||||||||||||||| |||||||||||| || ||| ||| ||| || |||||| Sbjct: 1469 ctgtgaccttctataggtccaatacatttgcagtagacgttgtgagtgtcgatgcagatg 1528 Query: 361 atttgcaaataacacacaaaattagcacttacacgatcggccctttccaatctagcaaag 420 |||||||||| | | ||||| ||| | || || || |||||||||||||| |||||| Sbjct: 1529 atttgcaaatggctaaaaaaatcagctcctatacaattggccctttccaatccagcaaac 1588 Query: 421 gtgagaaggctaaactgaaagtgaaagttcgcctcaacatccatgggatagtctctcttg 480 ||||||||| ||| |||| ||||||| | |||||||||||||||||||||||| ||| Sbjct: 1589 ctgagaaggcaaaagtgaatgtgaaagcatgtctcaacatccatgggatagtctctattg 1648 Query: 481 aatcagcaacgatgctggaagaggaggaagtggaagttccggtttcatctatgagtgagg 540 ||||||||| ||||||| |||||||||||||| |||||||| || ||| | |||| Sbjct: 1649 aatcagcaatgatgctg---gaggaggaagtggatgttccggtagcaactacaaatgaga 1705 Query: 541 tgccaaaggatgctactacaatggagacagatgatgcaccacaggaccctgcttct 596 | |||||||| ||||| |||||| ||||||||||||| | |||||||||||| Sbjct: 1706 cactaaaggatgatactaaaatggatacagatgatgcactaggtgaccctgcttct 1761
>ref|NM_189556.2| Oryza sativa (japonica cultivar-group), mRNA Length = 3139 Score = 299 bits (151), Expect = 6e-78 Identities = 418/506 (82%), Gaps = 1/506 (0%) Strand = Plus / Plus Query: 16 tttgttgaggttgttggatn-ggctctcgtgtccctgcagtaatgaagataattactgaa 74 |||||||| |||||||| | || ||||||||||| ||| |||| |||||| | || || Sbjct: 1214 tttgttgaagttgttggttcaggttctcgtgtcccggcaataattaagatactcacagat 1273 Query: 75 ttctttggaaaagaaccaaggagaactatgaatgcaagtgaatgtgttgccaggggatgt 134 |||||||| |||||||||||||| || |||||||| |||||||||||||||||||||||| Sbjct: 1274 ttctttgggaaagaaccaaggaggacaatgaatgcgagtgaatgtgttgccaggggatgt 1333 Query: 135 gctctccagtgtgctattcttagcccgacatttaaagtgcgggagtttcaggttaatgaa 194 || || |||||||||| ||||| || || ||||||||||| ||||||||||||||||| Sbjct: 1334 gcgctggagtgtgctatccttagtcccacttttaaagtgcgagagtttcaggttaatgat 1393 Query: 195 ggttttcctttttcagttgctttatcatggaagccagatgctcaggacaatgaatcccaa 254 ||||| ||||| ||| |||| | |||||||| ||||| ||||| | ||| |||| Sbjct: 1394 ggtttccctttctcaattgcaatgtcatggaaaccagactctcagaatggtgataaccaa 1453 Query: 255 caaactgttgtattccccaaggggaatccaatgcctagcatcaaggctctgaccttctat 314 || |||||||||||||||||||| || ||| |||| ||| | || || ||||||||||| Sbjct: 1454 cagactgttgtattccccaagggtaacccattgcccagcgttaaagcattgaccttctat 1513 Query: 315 aggtccagtacatttgcagtggatgttttgaatgttgacacagatgatttgcaaataaca 374 ||||||| ||||||| ||| ||||| | ||||||| || | ||||||||||||| || Sbjct: 1514 aggtccaatacatttcaagtagatgtcacgtatgttgatactggtgatttgcaaatatca 1573 Query: 375 cacaaaattagcacttacacgatcggccctttccaatctagcaaaggtgagaaggctaaa 434 | || || |||||||||||| | || |||||| | | |||||||||| || || ||| Sbjct: 1574 ccaaagatcagcacttacacggttggtcctttcaatcccggcaaaggtgacaaagcgaaa 1633 Query: 435 ctgaaagtgaaagttcgcctcaacatccatgggatagtctctcttgaatcagcaacgatg 494 |||||||||||||| ||||| |||||||||||| | ||| | ||||||||||||| ||| Sbjct: 1634 ctgaaagtgaaagtccgccttaacatccatggggtggtcacagttgaatcagcaacaatg 1693 Query: 495 ctggaagaggaggaagtggaagttcc 520 |||| |||||||||||||||||||| Sbjct: 1694 ttggaggaggaggaagtggaagttcc 1719 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 561 atggagacagatgatgcacc 580 |||||||||||||||||||| Sbjct: 1760 atggagacagatgatgcacc 1779
>dbj|AK100676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113C17, full insert sequence Length = 3139 Score = 297 bits (150), Expect = 2e-77 Identities = 399/482 (82%) Strand = Plus / Plus Query: 39 tctcgtgtccctgcagtaatgaagataattactgaattctttggaaaagaaccaaggaga 98 ||||||||||| ||| |||| |||||| | || || |||||||| |||||||||||||| Sbjct: 1238 tctcgtgtcccggcaataattaagatactcacagatttctttgggaaagaaccaaggagg 1297 Query: 99 actatgaatgcaagtgaatgtgttgccaggggatgtgctctccagtgtgctattcttagc 158 || |||||||| |||||||||||||||||||||||||| || |||||||||| ||||| Sbjct: 1298 acaatgaatgcgagtgaatgtgttgccaggggatgtgcgctggagtgtgctatccttagt 1357 Query: 159 ccgacatttaaagtgcgggagtttcaggttaatgaaggttttcctttttcagttgcttta 218 || || ||||||||||| ||||||||||||||||| ||||| ||||| ||| |||| | Sbjct: 1358 cccacttttaaagtgcgagagtttcaggttaatgatggtttccctttctcaattgcaatg 1417 Query: 219 tcatggaagccagatgctcaggacaatgaatcccaacaaactgttgtattccccaagggg 278 |||||||| ||||| ||||| | ||| |||||| |||||||||||||||||||| Sbjct: 1418 tcatggaaaccagactctcagaatggtgataaccaacagactgttgtattccccaagggt 1477 Query: 279 aatccaatgcctagcatcaaggctctgaccttctataggtccagtacatttgcagtggat 338 || ||| |||| ||| | || || |||||||||||||||||| ||||||| ||| ||| Sbjct: 1478 aacccattgcccagcgttaaagcattgaccttctataggtccaatacatttcaagtagat 1537 Query: 339 gttttgaatgttgacacagatgatttgcaaataacacacaaaattagcacttacacgatc 398 || | ||||||| || | ||||||||||||| ||| || || |||||||||||| | Sbjct: 1538 gtcacgtatgttgatactggtgatttgcaaatatcaccaaagatcagcacttacacggtt 1597 Query: 399 ggccctttccaatctagcaaaggtgagaaggctaaactgaaagtgaaagttcgcctcaac 458 || |||||| | | |||||||||| || || ||||||||||||||||| ||||| ||| Sbjct: 1598 ggtcctttcaatcccggcaaaggtgacaaagcgaaactgaaagtgaaagtccgccttaac 1657 Query: 459 atccatgggatagtctctcttgaatcagcaacgatgctggaagaggaggaagtggaagtt 518 ||||||||| | ||| | ||||||||||||| ||| |||| |||||||||||||||||| Sbjct: 1658 atccatggggtggtcacagttgaatcagcaacaatgttggaggaggaggaagtggaagtt 1717 Query: 519 cc 520 || Sbjct: 1718 cc 1719 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 561 atggagacagatgatgcacc 580 |||||||||||||||||||| Sbjct: 1760 atggagacagatgatgcacc 1779
>gb|BT018784.1| Zea mays clone EL01N0527D07.d mRNA sequence Length = 2082 Score = 232 bits (117), Expect = 1e-57 Identities = 402/496 (81%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 11 tgcactttgttgaggttgttggatn-ggctctcgtgtccctgcagtaatgaagataatta 69 ||||||||||||||||||| |||| || |||||||| || || |||| |||||||| | Sbjct: 269 tgcactttgttgaggttgtcggatctggttctcgtgttccagccataatcaagataatca 328 Query: 70 ctgaattctttggaaaagaaccaaggagaactatgaatgcaagtgaatgtgttgccaggg 129 |||| || ||||| || || || || |||| ||||||||||| || |||||||| ||| Sbjct: 329 ctgatttttttgggaaggagccgagacgaaccatgaatgcaagcgagtgtgttgcgcggg 388 Query: 130 gatgtgctctccagtgtgctattcttagcccgacatttaaagtgcgggagtttcaggtta 189 | ||||||||||||||||||||||| ||||| || || ||||||||||| || ||||||| Sbjct: 389 gctgtgctctccagtgtgctattctcagccccactttcaaagtgcgggaattccaggtta 448 Query: 190 atgaaggttttcctttttcagttgctttatcatggaagccagatgctcaggacaatgaat 249 |||| || |||||||| ||| |||| || |||||||| | ||| | ||| ||| || | Sbjct: 449 atgatgggtttcctttctcaattgcattgtcatggaaacaagactcgcagaacagtgcac 508 Query: 250 cccaacaaactgttgtattccccaaggggaatccaatgcctagcatcaaggctctgacct 309 ||||||| || ||||||| || ||||||||| ||| || ||||| || ||||| |||| Sbjct: 509 cccaacagacccttgtatttccaaaggggaatgtaattcccagcattaaagctctaacct 568 Query: 310 tctataggtccagtacatttgcagtggatgttttgaatgttgacacagatgatttgcaaa 369 |||||| ||||||||||||| ||| ||||||||| |||| |||||| || | ||||| Sbjct: 569 tctataaatccagtacatttgaagttgatgttttgtatgtggacacatgcgactcgcaaa 628 Query: 370 taacacacaaaattagcacttacacgatcggccctttccaatctagcaaaggtgagaagg 429 | |||| || || ||||||||||| || || ||||||||| | ||||||||||| || Sbjct: 629 ttccacagaagataagcacttacacaattggacctttccaaccctccaaaggtgagaggg 688 Query: 430 ctaaactgaaagtgaaagttcgcctcaacatccatgggatagtctctcttgaatcagcaa 489 | ||||||||||| ||||| || ||||||||||| ||||| ||| | |||| ||||| | Sbjct: 689 ccaaactgaaagttaaagtgcgtctcaacatccacgggattgtcacagttgattcagcta 748 Query: 490 cgatgctggaagagga 505 ||||||||| ||||| Sbjct: 749 tgatgctggaggagga 764
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 182 bits (92), Expect = 9e-43 Identities = 164/187 (87%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 2 cagaaagtctgcactttgttgaggttgttggatngg-ctctcgtgtccctgcagtaatga 60 |||||| | |||||||||||||||||||||||| || ||||||||| |||||| |||| | Sbjct: 4821071 cagaaaatgtgcactttgttgaggttgttggatcgggctctcgtgttcctgcaataatca 4821130 Query: 61 agataattactgaattctttggaaaagaaccaaggagaactatgaatgcaagtgaatgtg 120 |||||| |||||||| |||||||| ||||| ||||| |||||||||||||||||||||| Sbjct: 4821131 ggataatcactgaattttttggaaaggaaccgaggaggactatgaatgcaagtgaatgtg 4821190 Query: 121 ttgccaggggatgtgctctccagtgtgctattcttagcccgacatttaaagtgcgggagt 180 ||||| ||||||| ||||| ||||||||| |||||||||| || || ||||| ||||| | Sbjct: 4821191 ttgcccggggatgcgctcttcagtgtgctgttcttagccccactttcaaagtccgggaat 4821250 Query: 181 ttcaggt 187 || |||| Sbjct: 4821251 ttgaggt 4821257 Score = 93.7 bits (47), Expect = 7e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 399 ggccctttccaatctagcaaaggtgagaaggctaaactgaaagtgaaagttcgcctcaac 458 |||||||||||||| |||||| ||||||||| ||| |||| ||||||| | |||||| Sbjct: 4822432 ggccctttccaatccagcaaacctgagaaggcaaaagtgaatgtgaaagcatgtctcaac 4822491 Query: 459 atccatgggatagtctctcttgaatcagcaa 489 |||||||||||||||||| |||||||||||| Sbjct: 4822492 atccatgggatagtctctattgaatcagcaa 4822522 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Plus Query: 304 tgaccttctataggtccagtacatttgcagtggatgttttgaatgttgacacagatgatt 363 |||||||||||||||||| |||||||||||| || ||| ||| ||| || ||||||||| Sbjct: 4822230 tgaccttctataggtccaatacatttgcagtagacgttgtgagtgtcgatgcagatgatt 4822289 Query: 364 tgcaaat 370 ||||||| Sbjct: 4822290 tgcaaat 4822296 Score = 48.1 bits (24), Expect = 0.035 Identities = 45/52 (86%) Strand = Plus / Plus Query: 545 aaaggatgctactacaatggagacagatgatgcaccacaggaccctgcttct 596 |||||||| ||||| |||||| ||||||||||||| | |||||||||||| Sbjct: 4822660 aaaggatgatactaaaatggatacagatgatgcactaggtgaccctgcttct 4822711
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 182 bits (92), Expect = 9e-43 Identities = 164/187 (87%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 2 cagaaagtctgcactttgttgaggttgttggatngg-ctctcgtgtccctgcagtaatga 60 |||||| | |||||||||||||||||||||||| || ||||||||| |||||| |||| | Sbjct: 93479 cagaaaatgtgcactttgttgaggttgttggatcgggctctcgtgttcctgcaataatca 93538 Query: 61 agataattactgaattctttggaaaagaaccaaggagaactatgaatgcaagtgaatgtg 120 |||||| |||||||| |||||||| ||||| ||||| |||||||||||||||||||||| Sbjct: 93539 ggataatcactgaattttttggaaaggaaccgaggaggactatgaatgcaagtgaatgtg 93598 Query: 121 ttgccaggggatgtgctctccagtgtgctattcttagcccgacatttaaagtgcgggagt 180 ||||| ||||||| ||||| ||||||||| |||||||||| || || ||||| ||||| | Sbjct: 93599 ttgcccggggatgcgctcttcagtgtgctgttcttagccccactttcaaagtccgggaat 93658 Query: 181 ttcaggt 187 || |||| Sbjct: 93659 ttgaggt 93665 Score = 93.7 bits (47), Expect = 7e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 399 ggccctttccaatctagcaaaggtgagaaggctaaactgaaagtgaaagttcgcctcaac 458 |||||||||||||| |||||| ||||||||| ||| |||| ||||||| | |||||| Sbjct: 94840 ggccctttccaatccagcaaacctgagaaggcaaaagtgaatgtgaaagcatgtctcaac 94899 Query: 459 atccatgggatagtctctcttgaatcagcaa 489 |||||||||||||||||| |||||||||||| Sbjct: 94900 atccatgggatagtctctattgaatcagcaa 94930 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Plus Query: 304 tgaccttctataggtccagtacatttgcagtggatgttttgaatgttgacacagatgatt 363 |||||||||||||||||| |||||||||||| || ||| ||| ||| || ||||||||| Sbjct: 94638 tgaccttctataggtccaatacatttgcagtagacgttgtgagtgtcgatgcagatgatt 94697 Query: 364 tgcaaat 370 ||||||| Sbjct: 94698 tgcaaat 94704 Score = 48.1 bits (24), Expect = 0.035 Identities = 45/52 (86%) Strand = Plus / Plus Query: 545 aaaggatgctactacaatggagacagatgatgcaccacaggaccctgcttct 596 |||||||| ||||| |||||| ||||||||||||| | |||||||||||| Sbjct: 95068 aaaggatgatactaaaatggatacagatgatgcactaggtgaccctgcttct 95119
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 147 bits (74), Expect = 5e-32 Identities = 149/173 (86%), Gaps = 1/173 (0%) Strand = Plus / Plus Query: 16 tttgttgaggttgttggatn-ggctctcgtgtccctgcagtaatgaagataattactgaa 74 |||||||| |||||||| | || ||||||||||| ||| |||| |||||| | || || Sbjct: 4254483 tttgttgaagttgttggttcaggttctcgtgtcccggcaataattaagatactcacagat 4254542 Query: 75 ttctttggaaaagaaccaaggagaactatgaatgcaagtgaatgtgttgccaggggatgt 134 |||||||| |||||||||||||| || |||||||| |||||||||||||||||||||||| Sbjct: 4254543 ttctttgggaaagaaccaaggaggacaatgaatgcgagtgaatgtgttgccaggggatgt 4254602 Query: 135 gctctccagtgtgctattcttagcccgacatttaaagtgcgggagtttcaggt 187 || || |||||||||| ||||| || || ||||||||||| ||||||||||| Sbjct: 4254603 gcgctggagtgtgctatccttagtcccacttttaaagtgcgagagtttcaggt 4254655 Score = 81.8 bits (41), Expect = 3e-12 Identities = 119/145 (82%) Strand = Plus / Plus Query: 251 ccaacaaactgttgtattccccaaggggaatccaatgcctagcatcaaggctctgacctt 310 |||||| |||||||||||||||||||| || ||| |||| ||| | || || ||||||| Sbjct: 4255591 ccaacagactgttgtattccccaagggtaacccattgcccagcgttaaagcattgacctt 4255650 Query: 311 ctataggtccagtacatttgcagtggatgttttgaatgttgacacagatgatttgcaaat 370 ||||||||||| ||||||| ||| ||||| | ||||||| || | |||||||||||| Sbjct: 4255651 ctataggtccaatacatttcaagtagatgtcacgtatgttgatactggtgatttgcaaat 4255710 Query: 371 aacacacaaaattagcacttacacg 395 | ||| || || |||||||||||| Sbjct: 4255711 atcaccaaagatcagcacttacacg 4255735 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 415 gcaaaggtgagaaggctaaactgaaagtgaaagttcgcctcaacatccatgggatagtct 474 |||||||||| || || ||||||||||||||||| ||||| |||||||||||| | ||| Sbjct: 4255861 gcaaaggtgacaaagcgaaactgaaagtgaaagtccgccttaacatccatggggtggtca 4255920 Query: 475 ctcttgaatcagcaac 490 | ||||||||||||| Sbjct: 4255921 cagttgaatcagcaac 4255936 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 491 gatgctggaagaggaggaagtggaagttcc 520 |||| |||| |||||||||||||||||||| Sbjct: 4256033 gatgttggaggaggaggaagtggaagttcc 4256062 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 561 atggagacagatgatgcacc 580 |||||||||||||||||||| Sbjct: 4256103 atggagacagatgatgcacc 4256122
>dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1174_D05 Length = 128525 Score = 147 bits (74), Expect = 5e-32 Identities = 149/173 (86%), Gaps = 1/173 (0%) Strand = Plus / Plus Query: 16 tttgttgaggttgttggatn-ggctctcgtgtccctgcagtaatgaagataattactgaa 74 |||||||| |||||||| | || ||||||||||| ||| |||| |||||| | || || Sbjct: 92450 tttgttgaagttgttggttcaggttctcgtgtcccggcaataattaagatactcacagat 92509 Query: 75 ttctttggaaaagaaccaaggagaactatgaatgcaagtgaatgtgttgccaggggatgt 134 |||||||| |||||||||||||| || |||||||| |||||||||||||||||||||||| Sbjct: 92510 ttctttgggaaagaaccaaggaggacaatgaatgcgagtgaatgtgttgccaggggatgt 92569 Query: 135 gctctccagtgtgctattcttagcccgacatttaaagtgcgggagtttcaggt 187 || || |||||||||| ||||| || || ||||||||||| ||||||||||| Sbjct: 92570 gcgctggagtgtgctatccttagtcccacttttaaagtgcgagagtttcaggt 92622 Score = 81.8 bits (41), Expect = 3e-12 Identities = 119/145 (82%) Strand = Plus / Plus Query: 251 ccaacaaactgttgtattccccaaggggaatccaatgcctagcatcaaggctctgacctt 310 |||||| |||||||||||||||||||| || ||| |||| ||| | || || ||||||| Sbjct: 93558 ccaacagactgttgtattccccaagggtaacccattgcccagcgttaaagcattgacctt 93617 Query: 311 ctataggtccagtacatttgcagtggatgttttgaatgttgacacagatgatttgcaaat 370 ||||||||||| ||||||| ||| ||||| | ||||||| || | |||||||||||| Sbjct: 93618 ctataggtccaatacatttcaagtagatgtcacgtatgttgatactggtgatttgcaaat 93677 Query: 371 aacacacaaaattagcacttacacg 395 | ||| || || |||||||||||| Sbjct: 93678 atcaccaaagatcagcacttacacg 93702 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 415 gcaaaggtgagaaggctaaactgaaagtgaaagttcgcctcaacatccatgggatagtct 474 |||||||||| || || ||||||||||||||||| ||||| |||||||||||| | ||| Sbjct: 93828 gcaaaggtgacaaagcgaaactgaaagtgaaagtccgccttaacatccatggggtggtca 93887 Query: 475 ctcttgaatcagcaac 490 | ||||||||||||| Sbjct: 93888 cagttgaatcagcaac 93903 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 491 gatgctggaagaggaggaagtggaagttcc 520 |||| |||| |||||||||||||||||||| Sbjct: 94000 gatgttggaggaggaggaagtggaagttcc 94029 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 561 atggagacagatgatgcacc 580 |||||||||||||||||||| Sbjct: 94070 atggagacagatgatgcacc 94089
>dbj|AP003047.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0666G04 Length = 141983 Score = 147 bits (74), Expect = 5e-32 Identities = 149/173 (86%), Gaps = 1/173 (0%) Strand = Plus / Plus Query: 16 tttgttgaggttgttggatn-ggctctcgtgtccctgcagtaatgaagataattactgaa 74 |||||||| |||||||| | || ||||||||||| ||| |||| |||||| | || || Sbjct: 34253 tttgttgaagttgttggttcaggttctcgtgtcccggcaataattaagatactcacagat 34312 Query: 75 ttctttggaaaagaaccaaggagaactatgaatgcaagtgaatgtgttgccaggggatgt 134 |||||||| |||||||||||||| || |||||||| |||||||||||||||||||||||| Sbjct: 34313 ttctttgggaaagaaccaaggaggacaatgaatgcgagtgaatgtgttgccaggggatgt 34372 Query: 135 gctctccagtgtgctattcttagcccgacatttaaagtgcgggagtttcaggt 187 || || |||||||||| ||||| || || ||||||||||| ||||||||||| Sbjct: 34373 gcgctggagtgtgctatccttagtcccacttttaaagtgcgagagtttcaggt 34425 Score = 81.8 bits (41), Expect = 3e-12 Identities = 119/145 (82%) Strand = Plus / Plus Query: 251 ccaacaaactgttgtattccccaaggggaatccaatgcctagcatcaaggctctgacctt 310 |||||| |||||||||||||||||||| || ||| |||| ||| | || || ||||||| Sbjct: 35361 ccaacagactgttgtattccccaagggtaacccattgcccagcgttaaagcattgacctt 35420 Query: 311 ctataggtccagtacatttgcagtggatgttttgaatgttgacacagatgatttgcaaat 370 ||||||||||| ||||||| ||| ||||| | ||||||| || | |||||||||||| Sbjct: 35421 ctataggtccaatacatttcaagtagatgtcacgtatgttgatactggtgatttgcaaat 35480 Query: 371 aacacacaaaattagcacttacacg 395 | ||| || || |||||||||||| Sbjct: 35481 atcaccaaagatcagcacttacacg 35505 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 415 gcaaaggtgagaaggctaaactgaaagtgaaagttcgcctcaacatccatgggatagtct 474 |||||||||| || || ||||||||||||||||| ||||| |||||||||||| | ||| Sbjct: 35631 gcaaaggtgacaaagcgaaactgaaagtgaaagtccgccttaacatccatggggtggtca 35690 Query: 475 ctcttgaatcagcaac 490 | ||||||||||||| Sbjct: 35691 cagttgaatcagcaac 35706 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 491 gatgctggaagaggaggaagtggaagttcc 520 |||| |||| |||||||||||||||||||| Sbjct: 35803 gatgttggaggaggaggaagtggaagttcc 35832 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 561 atggagacagatgatgcacc 580 |||||||||||||||||||| Sbjct: 35873 atggagacagatgatgcacc 35892
>gb|AY103680.1| Zea mays PCO080984 mRNA sequence Length = 1931 Score = 147 bits (74), Expect = 5e-32 Identities = 182/217 (83%), Gaps = 1/217 (0%) Strand = Plus / Plus Query: 11 tgcactttgttgaggttgttggatn-ggctctcgtgtccctgcagtaatgaagataatta 69 |||||||||||||||||||||||| || |||||||| || || |||| |||||||| | Sbjct: 102 tgcactttgttgaggttgttggatctggttctcgtgttccggctataatcaagataataa 161 Query: 70 ctgaattctttggaaaagaaccaaggagaactatgaatgcaagtgaatgtgttgccaggg 129 |||| || ||||| || || ||||| |||| |||||||||||||| |||||||| | | Sbjct: 162 ctgatttttttgggaaggagccaagacgaaccatgaatgcaagtgagtgtgttgcgcgag 221 Query: 130 gatgtgctctccagtgtgctattcttagcccgacatttaaagtgcgggagtttcaggtta 189 |||||||||| |||||||||||||| ||||| || || |||||||| || || ||||||| Sbjct: 222 gatgtgctcttcagtgtgctattctcagccccactttcaaagtgcgagaattccaggtta 281 Query: 190 atgaaggttttcctttttcagttgctttatcatggaa 226 |||| || |||||||| ||| |||| || |||||||| Sbjct: 282 atgatgggtttcctttctcaattgcattgtcatggaa 318 Score = 133 bits (67), Expect = 8e-28 Identities = 181/219 (82%) Strand = Plus / Plus Query: 250 cccaacaaactgttgtattccccaaggggaatccaatgcctagcatcaaggctctgacct 309 |||||||||| |||||||||| ||||||||| |||| ||||||| || | ||| |||| Sbjct: 339 cccaacaaacccttgtattcccaaaggggaatgcaattcctagcactaaagttcttacct 398 Query: 310 tctataggtccagtacatttgcagtggatgttttgaatgttgacacagatgatttgcaaa 369 ||| || ||||||||||||| ||| ||||||||| |||| ||| || | | || |||| Sbjct: 399 tctttaaatccagtacatttgaagttgatgttttgtatgtcgacccaaacggcttacaaa 458 Query: 370 taacacacaaaattagcacttacacgatcggccctttccaatctagcaaaggtgagaagg 429 | |||| ||||| ||||| ||||| || |||||||||||| | |||||| ||||||| Sbjct: 459 ttccacaaaaaataagcacatacacaattggccctttccaaacctccaaaggagagaagg 518 Query: 430 ctaaactgaaagtgaaagttcgcctcaacatccatggga 468 | ||||||||||||||||| || |||||||||||||||| Sbjct: 519 ccaaactgaaagtgaaagtgcgtctcaacatccatggga 557
>emb|Z70314.1|ATHSP91 A.thaliana mRNA for heat-shock protein Length = 2923 Score = 67.9 bits (34), Expect = 4e-08 Identities = 127/158 (80%) Strand = Plus / Plus Query: 36 ggctctcgtgtccctgcagtaatgaagataattactgaattctttggaaaagaaccaagg 95 ||||||||||||||||| | || ||||| | ||||| || ||||| || || || ||| Sbjct: 1174 ggctctcgtgtccctgctatgatcaagattctaactgagttttttggtaaggagcccagg 1233 Query: 96 agaactatgaatgcaagtgaatgtgttgccaggggatgtgctctccagtgtgctattctt 155 | || |||||||||||||| ||||| | ||||||||||| | |||||||| ||||| Sbjct: 1234 cgtacaatgaatgcaagtgagtgtgtgtcaaggggatgtgccttgcagtgtgccattctc 1293 Query: 156 agcccgacatttaaagtgcgggagtttcaggttaatga 193 || ||||| |||||||| || || ||||||||| |||| Sbjct: 1294 agtccgacctttaaagttcgcgaatttcaggttcatga 1331 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 496 tggaagaggaggaagtggaagttccggt 523 |||||||||| ||||| ||||||||||| Sbjct: 1652 tggaagaggaagaagttgaagttccggt 1679
>ref|NM_180653.1| Arabidopsis thaliana ATP binding AT1G79920 transcript variant AT1G79920.1 mRNA, complete cds Length = 2941 Score = 60.0 bits (30), Expect = 9e-06 Identities = 126/158 (79%) Strand = Plus / Plus Query: 36 ggctctcgtgtccctgcagtaatgaagataattactgaattctttggaaaagaaccaagg 95 ||||||||||||||||| | || ||||| | ||||| || ||||| || || || ||| Sbjct: 1164 ggctctcgtgtccctgctatgatcaagattctaactgagttttttggtaaggagcccagg 1223 Query: 96 agaactatgaatgcaagtgaatgtgttgccaggggatgtgctctccagtgtgctattctt 155 | || |||||||||||||| ||||| | ||||||||||| | |||||||| ||||| Sbjct: 1224 cgtacaatgaatgcaagtgagtgtgtgtcgaggggatgtgccttgcagtgtgccattctc 1283 Query: 156 agcccgacatttaaagtgcgggagtttcaggttaatga 193 || ||||| |||||||| || || || |||||| |||| Sbjct: 1284 agtccgacctttaaagttcgcgaattccaggttcatga 1321 Score = 50.1 bits (25), Expect = 0.009 Identities = 82/101 (81%) Strand = Plus / Plus Query: 417 aaaggtgagaaggctaaactgaaagtgaaagttcgcctcaacatccatgggatagtctct 476 ||||| |||| ||| || ||||||||||||||| | | ||| | ||||| || |||||| Sbjct: 1563 aaaggcgagagggcaaagctgaaagtgaaagttagattgaacctgcatggaattgtctct 1622 Query: 477 cttgaatcagcaacgatgctggaagaggaggaagtggaagt 517 ||||||||||||| | |||||||||| ||||| ||||| Sbjct: 1623 gttgaatcagcaactcttttggaagaggaagaagttgaagt 1663
>ref|NM_106641.3| Arabidopsis thaliana ATP binding AT1G79920 transcript variant AT1G79920.2 mRNA, complete cds Length = 2941 Score = 60.0 bits (30), Expect = 9e-06 Identities = 126/158 (79%) Strand = Plus / Plus Query: 36 ggctctcgtgtccctgcagtaatgaagataattactgaattctttggaaaagaaccaagg 95 ||||||||||||||||| | || ||||| | ||||| || ||||| || || || ||| Sbjct: 1164 ggctctcgtgtccctgctatgatcaagattctaactgagttttttggtaaggagcccagg 1223 Query: 96 agaactatgaatgcaagtgaatgtgttgccaggggatgtgctctccagtgtgctattctt 155 | || |||||||||||||| ||||| | ||||||||||| | |||||||| ||||| Sbjct: 1224 cgtacaatgaatgcaagtgagtgtgtgtcgaggggatgtgccttgcagtgtgccattctc 1283 Query: 156 agcccgacatttaaagtgcgggagtttcaggttaatga 193 || ||||| |||||||| || || || |||||| |||| Sbjct: 1284 agtccgacctttaaagttcgcgaattccaggttcatga 1321 Score = 50.1 bits (25), Expect = 0.009 Identities = 82/101 (81%) Strand = Plus / Plus Query: 417 aaaggtgagaaggctaaactgaaagtgaaagttcgcctcaacatccatgggatagtctct 476 ||||| |||| ||| || ||||||||||||||| | | ||| | ||||| || |||||| Sbjct: 1563 aaaggcgagagggcaaagctgaaagtgaaagttagattgaacctgcatggaattgtctct 1622 Query: 477 cttgaatcagcaacgatgctggaagaggaggaagtggaagt 517 ||||||||||||| | |||||||||| ||||| ||||| Sbjct: 1623 gttgaatcagcaactcttttggaagaggaagaagttgaagt 1663
>ref|NM_106642.3| Arabidopsis thaliana HSP91 AT1G79930 (HSP91) transcript variant AT1G79930.1 mRNA, complete cds Length = 2949 Score = 60.0 bits (30), Expect = 9e-06 Identities = 126/158 (79%) Strand = Plus / Plus Query: 36 ggctctcgtgtccctgcagtaatgaagataattactgaattctttggaaaagaaccaagg 95 ||||||||||||||||| | || ||||| | ||||| || ||||| || || || ||| Sbjct: 1171 ggctctcgtgtccctgctatgatcaagattctaactgagttttttggtaaggagcccagg 1230 Query: 96 agaactatgaatgcaagtgaatgtgttgccaggggatgtgctctccagtgtgctattctt 155 | || |||||||||||||| ||||| | ||||||||||| | |||||||| ||||| Sbjct: 1231 cggacaatgaatgcaagtgagtgtgtgtcaaggggatgtgccttgcagtgtgccattctc 1290 Query: 156 agcccgacatttaaagtgcgggagtttcaggttaatga 193 || ||||| |||||||| || || || |||||| |||| Sbjct: 1291 agtccgacctttaaagttcgcgaattccaggttcatga 1328 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 496 tggaagaggaggaagtggaagttccggt 523 |||||||||| ||||| ||||||||||| Sbjct: 1649 tggaagaggaagaagttgaagttccggt 1676
>ref|NM_001036228.1| Arabidopsis thaliana HSP91 AT1G79930 (HSP91) transcript variant AT1G79930.2 mRNA, complete cds Length = 3012 Score = 60.0 bits (30), Expect = 9e-06 Identities = 126/158 (79%) Strand = Plus / Plus Query: 36 ggctctcgtgtccctgcagtaatgaagataattactgaattctttggaaaagaaccaagg 95 ||||||||||||||||| | || ||||| | ||||| || ||||| || || || ||| Sbjct: 1215 ggctctcgtgtccctgctatgatcaagattctaactgagttttttggtaaggagcccagg 1274 Query: 96 agaactatgaatgcaagtgaatgtgttgccaggggatgtgctctccagtgtgctattctt 155 | || |||||||||||||| ||||| | ||||||||||| | |||||||| ||||| Sbjct: 1275 cggacaatgaatgcaagtgagtgtgtgtcaaggggatgtgccttgcagtgtgccattctc 1334 Query: 156 agcccgacatttaaagtgcgggagtttcaggttaatga 193 || ||||| |||||||| || || || |||||| |||| Sbjct: 1335 agtccgacctttaaagttcgcgaattccaggttcatga 1372 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 496 tggaagaggaggaagtggaagttccggt 523 |||||||||| ||||| ||||||||||| Sbjct: 1693 tggaagaggaagaagttgaagttccggt 1720
>gb|BT000810.1| Arabidopsis thaliana At1g79920 mRNA sequence Length = 2952 Score = 60.0 bits (30), Expect = 9e-06 Identities = 126/158 (79%) Strand = Plus / Plus Query: 36 ggctctcgtgtccctgcagtaatgaagataattactgaattctttggaaaagaaccaagg 95 ||||||||||||||||| | || ||||| | ||||| || ||||| || || || ||| Sbjct: 1157 ggctctcgtgtccctgctatgatcaagattctaactgagttttttggtaaggagcccagg 1216 Query: 96 agaactatgaatgcaagtgaatgtgttgccaggggatgtgctctccagtgtgctattctt 155 | || |||||||||||||| ||||| | ||||||||||| | |||||||| ||||| Sbjct: 1217 cgtacaatgaatgcaagtgagtgtgtgtcgaggggatgtgccttgcagtgtgccattctc 1276 Query: 156 agcccgacatttaaagtgcgggagtttcaggttaatga 193 || ||||| |||||||| || || || |||||| |||| Sbjct: 1277 agtccgacctttaaagttcgcgaattccaggttcatga 1314 Score = 50.1 bits (25), Expect = 0.009 Identities = 82/101 (81%) Strand = Plus / Plus Query: 417 aaaggtgagaaggctaaactgaaagtgaaagttcgcctcaacatccatgggatagtctct 476 ||||| |||| ||| || ||||||||||||||| | | ||| | ||||| || |||||| Sbjct: 1556 aaaggcgagagggcaaagctgaaagtgaaagttagattgaacctgcatggaattgtctct 1615 Query: 477 cttgaatcagcaacgatgctggaagaggaggaagtggaagt 517 ||||||||||||| | |||||||||| ||||| ||||| Sbjct: 1616 gttgaatcagcaactcttttggaagaggaagaagttgaagt 1656
>gb|AY079015.1| Arabidopsis thaliana At1g79930/F19K16_11 mRNA, complete cds Length = 2798 Score = 60.0 bits (30), Expect = 9e-06 Identities = 126/158 (79%) Strand = Plus / Plus Query: 36 ggctctcgtgtccctgcagtaatgaagataattactgaattctttggaaaagaaccaagg 95 ||||||||||||||||| | || ||||| | ||||| || ||||| || || || ||| Sbjct: 1171 ggctctcgtgtccctgctatgatcaagattctaactgagttttttggtaaggagcccagg 1230 Query: 96 agaactatgaatgcaagtgaatgtgttgccaggggatgtgctctccagtgtgctattctt 155 | || |||||||||||||| ||||| | ||||||||||| | |||||||| ||||| Sbjct: 1231 cggacaatgaatgcaagtgagtgtgtgtcaaggggatgtgccttgcagtgtgccattctc 1290 Query: 156 agcccgacatttaaagtgcgggagtttcaggttaatga 193 || ||||| |||||||| || || || |||||| |||| Sbjct: 1291 agtccgacctttaaagttcgcgaattccaggttcatga 1328 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 496 tggaagaggaggaagtggaagttccggt 523 |||||||||| ||||| ||||||||||| Sbjct: 1649 tggaagaggaagaagttgaagttccggt 1676
>gb|AY065177.1| Arabidopsis thaliana putative heat-shock protein (At1g79920; F19K16.12) mRNA, complete cds Length = 2850 Score = 60.0 bits (30), Expect = 9e-06 Identities = 126/158 (79%) Strand = Plus / Plus Query: 36 ggctctcgtgtccctgcagtaatgaagataattactgaattctttggaaaagaaccaagg 95 ||||||||||||||||| | || ||||| | ||||| || ||||| || || || ||| Sbjct: 1164 ggctctcgtgtccctgctatgatcaagattctaactgagttttttggtaaggagcccagg 1223 Query: 96 agaactatgaatgcaagtgaatgtgttgccaggggatgtgctctccagtgtgctattctt 155 | || |||||||||||||| ||||| | ||||||||||| | |||||||| ||||| Sbjct: 1224 cgtacaatgaatgcaagtgagtgtgtgtcgaggggatgtgccttgcagtgtgccattctc 1283 Query: 156 agcccgacatttaaagtgcgggagtttcaggttaatga 193 || ||||| |||||||| || || || |||||| |||| Sbjct: 1284 agtccgacctttaaagttcgcgaattccaggttcatga 1321 Score = 50.1 bits (25), Expect = 0.009 Identities = 82/101 (81%) Strand = Plus / Plus Query: 417 aaaggtgagaaggctaaactgaaagtgaaagttcgcctcaacatccatgggatagtctct 476 ||||| |||| ||| || ||||||||||||||| | | ||| | ||||| || |||||| Sbjct: 1563 aaaggcgagagggcaaagctgaaagtgaaagttagattgaacctgcatggaattgtctct 1622 Query: 477 cttgaatcagcaacgatgctggaagaggaggaagtggaagt 517 ||||||||||||| | |||||||||| ||||| ||||| Sbjct: 1623 gttgaatcagcaactcttttggaagaggaagaagttgaagt 1663
>gb|BT002625.1| Arabidopsis thaliana At1g79930/F19K16_11 gene, complete cds Length = 2496 Score = 60.0 bits (30), Expect = 9e-06 Identities = 126/158 (79%) Strand = Plus / Plus Query: 36 ggctctcgtgtccctgcagtaatgaagataattactgaattctttggaaaagaaccaagg 95 ||||||||||||||||| | || ||||| | ||||| || ||||| || || || ||| Sbjct: 1021 ggctctcgtgtccctgctatgatcaagattctaactgagttttttggtaaggagcccagg 1080 Query: 96 agaactatgaatgcaagtgaatgtgttgccaggggatgtgctctccagtgtgctattctt 155 | || |||||||||||||| ||||| | ||||||||||| | |||||||| ||||| Sbjct: 1081 cggacaatgaatgcaagtgagtgtgtgtcaaggggatgtgccttgcagtgtgccattctc 1140 Query: 156 agcccgacatttaaagtgcgggagtttcaggttaatga 193 || ||||| |||||||| || || || |||||| |||| Sbjct: 1141 agtccgacctttaaagttcgcgaattccaggttcatga 1178 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 496 tggaagaggaggaagtggaagttccggt 523 |||||||||| ||||| ||||||||||| Sbjct: 1499 tggaagaggaagaagttgaagttccggt 1526
>gb|AC011717.6|AC011717 Arabidopsis thaliana chromosome 1 BAC F19K16 genomic sequence, complete sequence Length = 111301 Score = 58.0 bits (29), Expect = 4e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 36 ggctctcgtgtccctgcagtaatgaagataattactgaattctttggaaaagaaccaagg 95 ||||||||||||||||| | || ||||| | ||||| || ||||| || || || ||| Sbjct: 42976 ggctctcgtgtccctgctatgatcaagattctaactgagttttttggtaaggagcccagg 43035 Query: 96 agaactatgaatgcaagtgaatgtgttgccaggggatgtgctctccagtgtgctattctt 155 | || |||||||||||||| ||||| | ||||||||||| | |||||||| ||||| Sbjct: 43036 cgtacaatgaatgcaagtgagtgtgtgtcgaggggatgtgccttgcagtgtgccattctc 43095 Query: 156 agcccgacatttaaagt 172 || ||||| |||||||| Sbjct: 43096 agtccgacctttaaagt 43112 Score = 58.0 bits (29), Expect = 4e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 36 ggctctcgtgtccctgcagtaatgaagataattactgaattctttggaaaagaaccaagg 95 ||||||||||||||||| | || ||||| | ||||| || ||||| || || || ||| Sbjct: 38133 ggctctcgtgtccctgctatgatcaagattctaactgagttttttggtaaggagcccagg 38192 Query: 96 agaactatgaatgcaagtgaatgtgttgccaggggatgtgctctccagtgtgctattctt 155 | || |||||||||||||| ||||| | ||||||||||| | |||||||| ||||| Sbjct: 38193 cggacaatgaatgcaagtgagtgtgtgtcaaggggatgtgccttgcagtgtgccattctc 38252 Query: 156 agcccgacatttaaagt 172 || ||||| |||||||| Sbjct: 38253 agtccgacctttaaagt 38269 Score = 44.1 bits (22), Expect = 0.55 Identities = 61/74 (82%) Strand = Plus / Plus Query: 417 aaaggtgagaaggctaaactgaaagtgaaagttcgcctcaacatccatgggatagtctct 476 ||||| |||| ||| || ||||||||||||||| | | ||| | ||||| || |||||| Sbjct: 43577 aaaggcgagagggcaaagctgaaagtgaaagttagattgaacctgcatggaattgtctct 43636 Query: 477 cttgaatcagcaac 490 ||||||||||||| Sbjct: 43637 gttgaatcagcaac 43650 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 496 tggaagaggaggaagtggaagttccggt 523 |||||||||| ||||| ||||||||||| Sbjct: 38956 tggaagaggaagaagttgaagttccggt 38983
>gb|AC009322.1|AC009322 Arabidopsis thaliana chromosome I BAC F18B13 genomic sequence, complete sequence Length = 116905 Score = 58.0 bits (29), Expect = 4e-05 Identities = 110/137 (80%) Strand = Plus / Minus Query: 36 ggctctcgtgtccctgcagtaatgaagataattactgaattctttggaaaagaaccaagg 95 ||||||||||||||||| | || ||||| | ||||| || ||||| || || || ||| Sbjct: 2811 ggctctcgtgtccctgctatgatcaagattctaactgagttttttggtaaggagcccagg 2752 Query: 96 agaactatgaatgcaagtgaatgtgttgccaggggatgtgctctccagtgtgctattctt 155 | || |||||||||||||| ||||| | ||||||||||| | |||||||| ||||| Sbjct: 2751 cggacaatgaatgcaagtgagtgtgtgtcaaggggatgtgccttgcagtgtgccattctc 2692 Query: 156 agcccgacatttaaagt 172 || ||||| |||||||| Sbjct: 2691 agtccgacctttaaagt 2675 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 496 tggaagaggaggaagtggaagttccggt 523 |||||||||| ||||| ||||||||||| Sbjct: 1988 tggaagaggaagaagttgaagttccggt 1961
>gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome Length = 1796226 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 199 ttcctttttcagttgctttatca 221 ||||||||||||||||||||||| Sbjct: 1355215 ttcctttttcagttgctttatca 1355237
>gb|AC153571.14| Mus musculus 10 BAC RP23-309H16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 184967 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 581 acaggaccctgcttctagtgctg 603 ||||||||||||||||||||||| Sbjct: 97731 acaggaccctgcttctagtgctg 97753
>gb|AC129557.10| Mus musculus chromosome 19, clone RP24-245F23, complete sequence Length = 174415 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 103 tgaatgcaagtgaatgtgttgccaggg 129 |||||| |||||||||||||||||||| Sbjct: 27991 tgaatgaaagtgaatgtgttgccaggg 28017
>gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete genome Length = 1796846 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 199 ttcctttttcagttgctttatca 221 ||||||||||||||||||||||| Sbjct: 1347575 ttcctttttcagttgctttatca 1347597
>gb|AC018489.7| Drosophila melanogaster clone BACR19G19, complete sequence Length = 179077 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 364 tgcaaataacacacaaaattag 385 |||||||||||||||||||||| Sbjct: 65068 tgcaaataacacacaaaattag 65089
>gb|BC065970.1| Danio rerio heat shock protein 4, mRNA (cDNA clone MGC:77413 IMAGE:6970126), complete cds Length = 3025 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 123 gccaggggatgtgctctccagtgtgc 148 ||||| |||||||||||||||||||| Sbjct: 1262 gccagaggatgtgctctccagtgtgc 1287
>ref|NM_199857.1| Danio rerio heat shock protein 4 (hspa4), mRNA Length = 2979 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 123 gccaggggatgtgctctccagtgtgc 148 ||||| |||||||||||||||||||| Sbjct: 1233 gccagaggatgtgctctccagtgtgc 1258
>gb|BC048063.1| Danio rerio heat shock protein 4, mRNA (cDNA clone MGC:55743 IMAGE:3816385), complete cds Length = 2979 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 123 gccaggggatgtgctctccagtgtgc 148 ||||| |||||||||||||||||||| Sbjct: 1233 gccagaggatgtgctctccagtgtgc 1258
>gb|AE003503.4| Drosophila melanogaster chromosome X, section 55 of 74 of the complete sequence Length = 300468 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 364 tgcaaataacacacaaaattag 385 |||||||||||||||||||||| Sbjct: 266957 tgcaaataacacacaaaattag 266936
>emb|CR626909.11| Zebrafish DNA sequence from clone DKEY-78D3 in linkage group 15, complete sequence Length = 96878 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 369 ataacacacaaaattagcactt 390 |||||||||||||||||||||| Sbjct: 30377 ataacacacaaaattagcactt 30356
>gb|AC131747.5| Mus musculus BAC clone RP23-36O24 from chromosome 14, complete sequence Length = 212930 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 491 gatgctggaagaggaggaagt 511 ||||||||||||||||||||| Sbjct: 70195 gatgctggaagaggaggaagt 70215
>ref|XM_513540.1| PREDICTED: Pan troglodytes similar to kynurenine aminotransferase III (LOC456999), mRNA Length = 4467 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 494 gctggaagaggaggaagtgga 514 ||||||||||||||||||||| Sbjct: 1291 gctggaagaggaggaagtgga 1311
>gb|AC164974.2| Pan troglodytes BAC clone CH251-565G22 from chromosome 4, complete sequence Length = 210224 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 360 gatttgcaaataacacacaaa 380 ||||||||||||||||||||| Sbjct: 133937 gatttgcaaataacacacaaa 133917
>ref|NM_019610.3| Homo sapiens RNA binding motif protein, X-linked-like 1 (RBMXL1), mRNA Length = 3877 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 494 gctggaagaggaggaagtgga 514 ||||||||||||||||||||| Sbjct: 820 gctggaagaggaggaagtgga 840
>gb|AF039043.1| Caenorhabditis elegans cosmid F39C12, complete sequence Length = 40233 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 496 tggaagaggaggaagtggaag 516 ||||||||||||||||||||| Sbjct: 12184 tggaagaggaggaagtggaag 12164
>emb|AL592309.24| Human DNA sequence from clone RP11-293F5 on chromosome 1 Contains a novel gene, a novel pseudogene, a novel gene similar to heparan sulfate 6-O-sulfotransferase 1 (HS6ST1), a pseudogene similar to part of a novel gene, the gene for a hypothetical protein AE2, a profilin 1 (PFN1) pseudogene, the 5' end of the ALPL gene for alkaline phosphatase, liver/bone/kidney and a CpG island, complete sequence Length = 206231 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 gaaggttttcctttttcagtt 212 ||||||||||||||||||||| Sbjct: 82953 gaaggttttcctttttcagtt 82973
>emb|AL139416.5| Human DNA sequence from clone RP4-531M19 on chromosome 1 Contains the 5' end of the gene for a novel protein (FLJ32614), the gene for a novel protein similar to X-linked RNA binding motif protein (RBMX) (DKFZp547N1117), the 3' end of the GBP3 gene for guanylate binding protein 3 and a CpG island, complete sequence Length = 34250 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 494 gctggaagaggaggaagtgga 514 ||||||||||||||||||||| Sbjct: 6377 gctggaagaggaggaagtgga 6357
>emb|AL136167.8| Human DNA sequence from clone RP1-299I16 on chromosome Xq26.1-27.3 Contains part of the GPR112 gene for G protein-coupled receptor 112, complete sequence Length = 63946 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 323 tacatttgcagtggatgtttt 343 ||||||||||||||||||||| Sbjct: 21026 tacatttgcagtggatgtttt 21046
>emb|AL832554.1|HSM803863 Homo sapiens mRNA; cDNA DKFZp547N1117 (from clone DKFZp547N1117) Length = 4857 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 494 gctggaagaggaggaagtgga 514 ||||||||||||||||||||| Sbjct: 800 gctggaagaggaggaagtgga 820
>emb|CR936801.1| Homo sapiens mRNA; cDNA DKFZp781E1948 (from clone DKFZp781E1948) Length = 8971 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 323 tacatttgcagtggatgtttt 343 ||||||||||||||||||||| Sbjct: 468 tacatttgcagtggatgtttt 488
>ref|NM_076424.2| Caenorhabditis elegans F39C12.1 (F39C12.1) mRNA, complete cds Length = 15429 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 496 tggaagaggaggaagtggaag 516 ||||||||||||||||||||| Sbjct: 4559 tggaagaggaggaagtggaag 4579
>gb|BC012942.1| Homo sapiens RNA binding motif protein, X-linked-like 1, mRNA (cDNA clone MGC:9398 IMAGE:3875565), complete cds Length = 3678 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 494 gctggaagaggaggaagtgga 514 ||||||||||||||||||||| Sbjct: 606 gctggaagaggaggaagtgga 626
>gb|AC107068.3| Homo sapiens BAC clone RP11-121C2 from 4, complete sequence Length = 181804 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 gatttgcaaataacacacaaa 380 ||||||||||||||||||||| Sbjct: 48620 gatttgcaaataacacacaaa 48640
>ref|NM_153834.3| Homo sapiens G protein-coupled receptor 112 (GPR112), mRNA Length = 9931 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 323 tacatttgcagtggatgtttt 343 ||||||||||||||||||||| Sbjct: 1224 tacatttgcagtggatgtttt 1244
>gb|AY140954.1| Homo sapiens G-protein coupled receptor GPR112 (GPR112) mRNA, complete cds Length = 8400 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 323 tacatttgcagtggatgtttt 343 ||||||||||||||||||||| Sbjct: 741 tacatttgcagtggatgtttt 761
>gb|AY882585.1| Homo sapiens G protein-coupled receptor 112 (GPR112) mRNA, complete cds Length = 9931 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 323 tacatttgcagtggatgtttt 343 ||||||||||||||||||||| Sbjct: 1224 tacatttgcagtggatgtttt 1244
>gb|DQ120655.1| Cercopithecus sabaeus RBM1 gene, partial cds Length = 1155 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 494 gctggaagaggaggaagtgga 514 ||||||||||||||||||||| Sbjct: 331 gctggaagaggaggaagtgga 351
>gb|DQ120654.1| Hylobates lar RBM1 gene, partial cds Length = 1155 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 494 gctggaagaggaggaagtgga 514 ||||||||||||||||||||| Sbjct: 331 gctggaagaggaggaagtgga 351
>gb|DQ120653.1| Pongo pygmaeus RBM1 gene, partial cds Length = 1155 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 494 gctggaagaggaggaagtgga 514 ||||||||||||||||||||| Sbjct: 331 gctggaagaggaggaagtgga 351
>gb|DQ120652.1| Gorilla gorilla RBM1 gene, partial cds Length = 1155 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 494 gctggaagaggaggaagtgga 514 ||||||||||||||||||||| Sbjct: 331 gctggaagaggaggaagtgga 351
>gb|DQ120651.1| Pan troglodytes RBM1 gene, partial cds Length = 1155 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 494 gctggaagaggaggaagtgga 514 ||||||||||||||||||||| Sbjct: 331 gctggaagaggaggaagtgga 351
>gb|DQ120650.1| Homo sapiens RBM1 gene, partial cds Length = 1152 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 494 gctggaagaggaggaagtgga 514 ||||||||||||||||||||| Sbjct: 331 gctggaagaggaggaagtgga 351
>gb|AY726636.1| Xenopus laevis Brg1 mRNA, complete cds Length = 5031 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 ggaagaggaggaagtggaag 516 |||||||||||||||||||| Sbjct: 4682 ggaagaggaggaagtggaag 4701
>ref|XM_521390.1| PREDICTED: Pan troglodytes similar to adhesion-type protein ADMLX - human (LOC465990), mRNA Length = 1475 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 ccaaggagaactatgaatgc 109 |||||||||||||||||||| Sbjct: 452 ccaaggagaactatgaatgc 471
>gb|BC106223.1| Xenopus laevis cDNA clone MGC:130651 IMAGE:7391671, complete cds Length = 1090 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 agcaaaggtgagaaggctaa 433 |||||||||||||||||||| Sbjct: 581 agcaaaggtgagaaggctaa 600
>ref|XM_613004.2| PREDICTED: Bos taurus similar to UPF3 regulator of nonsense transcripts homolog B isoform 2 (LOC540761), mRNA Length = 1580 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 ctaaactgaaagtgaaagtt 449 |||||||||||||||||||| Sbjct: 1332 ctaaactgaaagtgaaagtt 1313
>gb|AY723745.1| Hepatitis E virus isolate IND-SW-00-01, complete genome Length = 7262 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 526 catctatgagtgaggtgcca 545 |||||||||||||||||||| Sbjct: 3330 catctatgagtgaggtgcca 3311
>ref|NM_011546.1| Mus musculus zinc finger homeobox 1a (Zfhx1a), mRNA Length = 5214 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 ggaagaggaggaagtggaag 516 |||||||||||||||||||| Sbjct: 3193 ggaagaggaggaagtggaag 3212
>gb|AY339371.1| Rattus norvegicus ASB15 mRNA, partial cds Length = 437 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 606 gatcctgctgaggctgctgctgaa 629 |||| ||||||||||||||||||| Sbjct: 357 gatcatgctgaggctgctgctgaa 380
>gb|AC129539.11| Mus musculus chromosome 16, clone RP23-246B24, complete sequence Length = 238585 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 ccagatgctcaggacaatga 247 |||||||||||||||||||| Sbjct: 118381 ccagatgctcaggacaatga 118400
>emb|CT010522.7| Mouse DNA sequence from clone RP23-310H3 on chromosome 16, complete sequence Length = 169798 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 aggtgagaaggctaaactga 438 |||||||||||||||||||| Sbjct: 44260 aggtgagaaggctaaactga 44241
>gb|AC147133.2| Pan troglodytes BAC clone CH251-372A19 from Y, complete sequence Length = 192074 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 ccaaggagaactatgaatgc 109 |||||||||||||||||||| Sbjct: 18254 ccaaggagaactatgaatgc 18235
>gb|AC146203.2| Pan troglodytes BAC clone CH251-417F24 from Y, complete sequence Length = 162325 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 ccaaggagaactatgaatgc 109 |||||||||||||||||||| Sbjct: 10805 ccaaggagaactatgaatgc 10824
>gb|AC134834.3| Mus musculus BAC clone RP24-320P15 from chromosome 18, complete sequence Length = 169143 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 497 ggaagaggaggaagtggaag 516 |||||||||||||||||||| Sbjct: 163888 ggaagaggaggaagtggaag 163869
>gb|AC138619.4| Mus musculus BAC clone RP23-278M16 from chromosome 18, complete sequence Length = 170250 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 ggaagaggaggaagtggaag 516 |||||||||||||||||||| Sbjct: 53585 ggaagaggaggaagtggaag 53604
>gb|AC111103.7| Mus musculus chromosome 16, clone RP23-187G7, complete sequence Length = 222348 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 aggtgagaaggctaaactga 438 |||||||||||||||||||| Sbjct: 72549 aggtgagaaggctaaactga 72568
>gb|AC153529.7| Mus musculus 10 BAC RP23-239G23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 153084 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 acacagatgatttgcaaata 371 |||||||||||||||||||| Sbjct: 83958 acacagatgatttgcaaata 83939
>emb|AL354996.9| Human DNA sequence from clone RP11-478H12 on chromosome 13, complete sequence Length = 54981 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 aggtgagaaggctaaactga 438 |||||||||||||||||||| Sbjct: 34328 aggtgagaaggctaaactga 34347
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 ctctcttgaatcagcaacga 492 |||||||||||||||||||| Sbjct: 982990 ctctcttgaatcagcaacga 982971
>emb|BX927205.8| Zebrafish DNA sequence from clone CH211-118D21 in linkage group 12, complete sequence Length = 163503 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 tcccaacaaactgttgtatt 268 |||||||||||||||||||| Sbjct: 81977 tcccaacaaactgttgtatt 81958
>gb|BC097405.1| Rattus norvegicus similar to ankyrin repeat domain-containing SOCS box protein Asb-15, mRNA (cDNA clone IMAGE:7453988), partial cds Length = 1534 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 606 gatcctgctgaggctgctgctgaa 629 |||| ||||||||||||||||||| Sbjct: 1352 gatcatgctgaggctgctgctgaa 1375
>gb|AC022145.8| Homo sapiens chromosome 19 clone CTD-2579N5, complete sequence Length = 174994 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 ctcaacatccatgggatagt 472 |||||||||||||||||||| Sbjct: 115638 ctcaacatccatgggatagt 115657
>dbj|BS000646.3| Pan troglodytes chromosome Y clone: PTB-569F12, complete sequence Length = 225175 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 ccaaggagaactatgaatgc 109 |||||||||||||||||||| Sbjct: 96142 ccaaggagaactatgaatgc 96123
>dbj|BS000644.2| Pan troglodytes chromosome Y clone: PTB-321M16, complete sequence Length = 134015 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 ccaaggagaactatgaatgc 109 |||||||||||||||||||| Sbjct: 38735 ccaaggagaactatgaatgc 38716
>dbj|BS000580.1| Pan troglodytes chromosome Y clone:PTB-011J24, complete sequence Length = 65330 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 ccaaggagaactatgaatgc 109 |||||||||||||||||||| Sbjct: 46164 ccaaggagaactatgaatgc 46145
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 ccaaggagaactatgaatgc 109 |||||||||||||||||||| Sbjct: 19019765 ccaaggagaactatgaatgc 19019784
>gb|AC104635.12| Homo sapiens 3 BAC RP11-567G11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 66672 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 aggtgagaaggctaaactga 438 |||||||||||||||||||| Sbjct: 27372 aggtgagaaggctaaactga 27353
>gb|AC010617.8| Homo sapiens chromosome 19 clone CTD-2607J13, complete sequence Length = 101166 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 ctcaacatccatgggatagt 472 |||||||||||||||||||| Sbjct: 33935 ctcaacatccatgggatagt 33916
>gb|AC084768.4| Homo sapiens chromosome 8, clone RP11-281H11, complete sequence Length = 173677 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 agaggaggaagtggaagttc 519 |||||||||||||||||||| Sbjct: 28378 agaggaggaagtggaagttc 28397
>ref|NM_169658.2| Drosophila melanogaster Ataxin-2 CG5166-RC, transcript variant C (Atx2), mRNA Length = 5020 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 609 cctgctgaggctgctgctga 628 |||||||||||||||||||| Sbjct: 2078 cctgctgaggctgctgctga 2059
>ref|NM_169657.1| Drosophila melanogaster Ataxin-2 CG5166-RB, transcript variant B (Atx2), mRNA Length = 5690 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 609 cctgctgaggctgctgctga 628 |||||||||||||||||||| Sbjct: 2748 cctgctgaggctgctgctga 2729
>ref|NM_142209.2| Drosophila melanogaster Ataxin-2 CG5166-RA, transcript variant A (Atx2), mRNA Length = 5149 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 609 cctgctgaggctgctgctga 628 |||||||||||||||||||| Sbjct: 2078 cctgctgaggctgctgctga 2059
>gb|AC104444.2| Homo sapiens chromosome 3 clone RP11-420K5, complete sequence Length = 161054 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 aggtgagaaggctaaactga 438 |||||||||||||||||||| Sbjct: 32348 aggtgagaaggctaaactga 32367
>gb|AY095516.1| Drosophila melanogaster GH13857 full insert cDNA Length = 4303 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 609 cctgctgaggctgctgctga 628 |||||||||||||||||||| Sbjct: 2513 cctgctgaggctgctgctga 2494
>dbj|AK154720.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630104H16 product:sepiapterin reductase, full insert sequence Length = 3551 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 497 ggaagaggaggaagtggaag 516 |||||||||||||||||||| Sbjct: 3347 ggaagaggaggaagtggaag 3328
>gb|AC093581.2| Homo sapiens chromosome 1 clone RP11-22M7, complete sequence Length = 156992 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 aggtgagaaggctaaactga 438 |||||||||||||||||||| Sbjct: 77712 aggtgagaaggctaaactga 77693
>gb|AY058253.1| Drosophila melanogaster GH01409 full length cDNA Length = 4350 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 609 cctgctgaggctgctgctga 628 |||||||||||||||||||| Sbjct: 2078 cctgctgaggctgctgctga 2059
>gb|AC025765.6| Homo sapiens chromosome 5 clone CTB-57H20, complete sequence Length = 218515 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 agtttcaggttaatgaaggt 197 |||||||||||||||||||| Sbjct: 216287 agtttcaggttaatgaaggt 216306
>gb|AC154586.2| Mus musculus BAC clone RP23-362L12 from chromosome 16, complete sequence Length = 224155 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 gctttatcatggaagccaga 232 |||||||||||||||||||| Sbjct: 158538 gctttatcatggaagccaga 158519
>dbj|AK077901.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030430B05 product:zinc finger homeobox 1a, full insert sequence Length = 1651 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 ggaagaggaggaagtggaag 516 |||||||||||||||||||| Sbjct: 466 ggaagaggaggaagtggaag 485
>dbj|AK084643.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330024O10 product:unclassifiable, full insert sequence Length = 2469 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 acacagatgatttgcaaata 371 |||||||||||||||||||| Sbjct: 1455 acacagatgatttgcaaata 1436
>gb|AC008696.6|AC008696 Homo sapiens chromosome 5 clone CTB-70D19, complete sequence Length = 155666 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 agtttcaggttaatgaaggt 197 |||||||||||||||||||| Sbjct: 1718 agtttcaggttaatgaaggt 1737
>ref|NM_066804.2| Caenorhabditis elegans K03H1.5 (K03H1.5) mRNA, complete cds Length = 4275 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 gttttcctttttcagttgct 215 |||||||||||||||||||| Sbjct: 138 gttttcctttttcagttgct 119
>gb|AY950549.1| Streptococcus pneumoniae strain 14893 penicillin binding protein (pbp2x) gene, partial cds Length = 1629 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 caatgcctagcatcaaggct 302 |||||||||||||||||||| Sbjct: 1394 caatgcctagcatcaaggct 1413
>gb|AY762376.1| Xenopus laevis Brg1 (Brg1) mRNA, complete cds Length = 5487 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 ggaagaggaggaagtggaag 516 |||||||||||||||||||| Sbjct: 4695 ggaagaggaggaagtggaag 4714
>gb|AC007769.3|AC007769 Drosophila melanogaster, chromosome 3R, region 88F-88F, BAC clone BACR17K19, complete sequence Length = 167918 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 609 cctgctgaggctgctgctga 628 |||||||||||||||||||| Sbjct: 73378 cctgctgaggctgctgctga 73359
>gb|AC159114.7| Mus musculus BAC RP23-370L19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 169393 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 acacagatgatttgcaaata 371 |||||||||||||||||||| Sbjct: 131104 acacagatgatttgcaaata 131123
>gb|AC133183.3| Mus musculus BAC clone RP24-185O19 from chromosome 12, complete sequence Length = 182948 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 497 ggaagaggaggaagtggaag 516 |||||||||||||||||||| Sbjct: 131545 ggaagaggaggaagtggaag 131526
>gb|AC096669.1| Homo sapiens BAC clone RP11-380G16 from 2, complete sequence Length = 218670 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 78 tttggaaaagaaccaaggagaact 101 |||||||||||||||| ||||||| Sbjct: 46418 tttggaaaagaaccaatgagaact 46441
>gb|AC004944.1|AC004944 Homo sapiens PAC clone RP5-991O23 from 8, complete sequence Length = 133258 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 agaggaggaagtggaagttc 519 |||||||||||||||||||| Sbjct: 117230 agaggaggaagtggaagttc 117249
>ref|XM_216108.3| PREDICTED: Rattus norvegicus ankyrin repeat and SOCS box-containing protein 15 (Asb15), mRNA Length = 1313 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 606 gatcctgctgaggctgctgctgaa 629 |||| ||||||||||||||||||| Sbjct: 843 gatcatgctgaggctgctgctgaa 866
>gb|AC092058.3| Homo sapiens chromosome 3 clone RP11-667E17, complete sequence Length = 200898 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 aggtgagaaggctaaactga 438 |||||||||||||||||||| Sbjct: 43101 aggtgagaaggctaaactga 43082
>gb|AC073895.22| Homo sapiens 3 BAC RP11-622L21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167311 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 aggtgagaaggctaaactga 438 |||||||||||||||||||| Sbjct: 40839 aggtgagaaggctaaactga 40858
>gb|AC122335.4| Mus musculus BAC clone RP23-350F7 from chromosome 10, complete sequence Length = 193300 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 ttctttggaaaagaaccaaggaga 98 |||||| ||||||||||||||||| Sbjct: 126080 ttcttttgaaaagaaccaaggaga 126057
>gb|AC006370.2|AC006370 Homo sapiens BAC clone RP11-292P9 from Y, complete sequence Length = 173146 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 ccaaggagaactatgaatgc 109 |||||||||||||||||||| Sbjct: 12884 ccaaggagaactatgaatgc 12903
>gb|U70853.1| Caenorhabditis elegans cosmid M01H9, complete sequence Length = 30522 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 gctcaggacaatgaatccca 253 |||||||||||||||||||| Sbjct: 18448 gctcaggacaatgaatccca 18467
>gb|AE003708.3| Drosophila melanogaster chromosome 3R, section 46 of 118 of the complete sequence Length = 236375 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 609 cctgctgaggctgctgctga 628 |||||||||||||||||||| Sbjct: 217716 cctgctgaggctgctgctga 217697
>gb|BT001340.1| Drosophila melanogaster AT22221 full insert cDNA Length = 3192 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 609 cctgctgaggctgctgctga 628 |||||||||||||||||||| Sbjct: 1555 cctgctgaggctgctgctga 1536
>gb|AC153373.4| Mus musculus 6 BAC RP23-100J14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 218409 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 497 ggaagaggaggaagtggaag 516 |||||||||||||||||||| Sbjct: 40625 ggaagaggaggaagtggaag 40606
>emb|AL929291.9| Zebrafish DNA sequence from clone CH211-189P10 in linkage group 20, complete sequence Length = 149681 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ctttgttgaggttgttggat 34 |||||||||||||||||||| Sbjct: 88123 ctttgttgaggttgttggat 88142
>gb|AC147825.2| Xenopus tropicalis clone CH216-135H10, complete sequence Length = 174462 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 gtgtccctgcagtaatgaag 62 |||||||||||||||||||| Sbjct: 58211 gtgtccctgcagtaatgaag 58230
>emb|AL133224.4|CNS01DU9 Human chromosome 14 DNA sequence BAC R-16G17 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 187385 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 aggtgagaaggctaaactga 438 |||||||||||||||||||| Sbjct: 97150 aggtgagaaggctaaactga 97131
>emb|AL935044.6| Zebrafish DNA sequence from clone CH211-190O19, complete sequence Length = 155612 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 ctaaactgaaagtgaaagtt 449 |||||||||||||||||||| Sbjct: 61547 ctaaactgaaagtgaaagtt 61566
>gb|AC153605.2| Mus musculus 6 BAC RP23-346H23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 229744 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 ggaagaggaggaagtggaag 516 |||||||||||||||||||| Sbjct: 13634 ggaagaggaggaagtggaag 13653
>emb|AL611952.9| Mouse DNA sequence from clone RP23-70K18 on chromosome 4, complete sequence Length = 89500 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 497 ggaagaggaggaagtggaag 516 |||||||||||||||||||| Sbjct: 26901 ggaagaggaggaagtggaag 26882
>gb|U26259.1|MMU26259 Mus musculus C2-H2 zinc finger protein mRNA, complete cds Length = 5237 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 ggaagaggaggaagtggaag 516 |||||||||||||||||||| Sbjct: 3210 ggaagaggaggaagtggaag 3229
>emb|X68759.1|HSKLYE4A H.sapiens KAL-Y pseudogene, exon 4 Length = 225 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 ccaaggagaactatgaatgc 109 |||||||||||||||||||| Sbjct: 13 ccaaggagaactatgaatgc 32
>dbj|D76432.1| Mouse mRNA for transcriptional repressor deltaEF1, complete cds Length = 5214 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 ggaagaggaggaagtggaag 516 |||||||||||||||||||| Sbjct: 3193 ggaagaggaggaagtggaag 3212 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,803,567 Number of Sequences: 3902068 Number of extensions: 6803567 Number of successful extensions: 163553 Number of sequences better than 10.0: 119 Number of HSP's better than 10.0 without gapping: 119 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 163069 Number of HSP's gapped (non-prelim): 451 length of query: 633 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 610 effective length of database: 17,143,297,704 effective search space: 10457411599440 effective search space used: 10457411599440 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
