ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags33c10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_112549.3| Arabidopsis thaliana unknown protein AT3G16760 ... 44 0.50
2ref|NM_180673.1| Arabidopsis thaliana unknown protein AT3G16760 ... 44 0.50
3gb|BT015102.1| Arabidopsis thaliana At3g16760 gene, complete cds 44 0.50
4gb|BT011685.1| Arabidopsis thaliana At3g16760 gene, complete cds 44 0.50
5gb|AC164296.2| Mus musculus BAC clone RP24-342N6 from chromosome... 44 0.50
6ref|XM_548129.2| PREDICTED: Canis familiaris similar to keratin ... 44 0.50
7emb|BX538350.1| Cryptosporidium parvum chromosome 6, complete se... 44 0.50
8ref|NM_165340.1| Drosophila melanogaster CG9317-RB, transcript v... 44 0.50
9ref|NM_136208.2| Drosophila melanogaster CG9317-RA, transcript v... 44 0.50
10gb|AY047547.1| Drosophila melanogaster GH05908 full length cDNA 44 0.50
11gb|AC093047.1| Drosophila melanogaster, chromosome 2L, region 38... 44 0.50
12emb|BX822556.1|CNS0A600 Arabidopsis thaliana Full-length cDNA Co... 44 0.50
13emb|BX824322.1|CNS0A5I8 Arabidopsis thaliana Full-length cDNA Co... 44 0.50
14dbj|AB022217.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 44 0.50
15gb|AE003667.3| Drosophila melanogaster chromosome 2L, section 76... 44 0.50
16emb|CT009627.9| Mouse DNA sequence from clone RP23-71E4 on chrom... 44 0.50
17gb|AC004759.1|AC004759 Drosophila melanogaster DNA sequence (P1s... 44 0.50
18gb|AC163029.5| Mus musculus chromosome 1, clone RP23-267I23, com... 42 2.0
19emb|AL137072.8| Human DNA sequence from clone RP11-29B11 on chro... 42 2.0
20gb|AY152833.1| Felis catus clone BAC 244e2 major histocompatibli... 42 2.0
21gb|AC091221.3| Drosophila melanogaster 3L BAC RP98-9I19 (Roswell... 42 2.0
22gb|AC005395.3| Arabidopsis thaliana chromosome 2 clone F17H15 ma... 42 2.0
23gb|AC004747.3| Arabidopsis thaliana chromosome 2 clone T19L18 ma... 42 2.0
24gb|AC105151.8| Mus musculus chromosome 1, clone RP23-28N2, compl... 42 2.0
25dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
26dbj|AP003334.4| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
27emb|BX537302.12| Mouse DNA sequence from clone RP23-349I9 on chr... 42 2.0
28dbj|D61393.2|ATHAVPEA Arabidopsis thaliana gene for alpha-VPE, c... 42 2.0
29gb|AE003556.3| Drosophila melanogaster chromosome 3L, section 29... 42 2.0
30gb|U30246.1|HSU30246 Human bumetanide-sensitive Na-K-Cl cotransp... 40 7.8
31gb|AC166289.4| Mus musculus chromosome 7, clone RP24-132A16, com... 40 7.8
32ref|XM_636811.1| Dictyostelium discoideum hypothetical protein (... 40 7.8
33ref|XM_526998.1| PREDICTED: Pan troglodytes solute carrier famil... 40 7.8
34gb|AC146457.3| Pan troglodytes BAC clone CH251-330N17 from Y, co... 40 7.8
35gb|AC101762.7| Mus musculus chromosome 7, clone RP24-315G8, comp... 40 7.8
36gb|AY423549.1| Lycopersicon esculentum coronatine-insensitive 1 ... 40 7.8
37ref|NM_001046.2| Homo sapiens solute carrier family 12 (sodium/p... 40 7.8
38gb|AC159294.2| Mus musculus BAC clone RP23-287I15 from chromosom... 40 7.8
39emb|Z75741.1|HS107N3 Human DNA sequence from clone RP1-107N3 on ... 40 7.8
40emb|AL162735.41| Human DNA sequence from clone RP11-255E17 on ch... 40 7.8
41emb|AL022143.1|HS1026E2 Human DNA sequence from clone RP5-1026E2... 40 7.8
42gb|BC033003.2| Homo sapiens solute carrier family 12 (sodium/pot... 40 7.8
43gb|AY280459.1| Homo sapiens bumetanide-sensitive Na-K-Cl cotrans... 40 7.8
44dbj|BS000650.1| Pan troglodytes chromosome Y clone: PTBY-008P10,... 40 7.8
45dbj|BS000591.1| Pan troglodytes chromosome Y clone:PTB-113D22, c... 40 7.8
46gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 7.8
47gb|AC113132.3| Homo sapiens chromosome 18, clone RP11-433F3, com... 40 7.8
48gb|AC096756.3| Homo sapiens BAC clone RP11-526A4 from 4, complet... 40 7.8
49gb|AC091906.3| Homo sapiens chromosome 5 clone RP11-193P20, comp... 40 7.8
50emb|BX548002.12| Zebrafish DNA sequence from clone CH211-170I2 i... 40 7.8
51gb|AC005231.3| Homo sapiens PAC clone RP5-1186P10 from 7, comple... 40 7.8
52gb|AC016749.4|AC016749 Homo sapiens clone RP11-504E20, complete ... 40 7.8
53gb|AC079161.5| Homo sapiens BAC clone RP11-416B10 from 2, comple... 40 7.8
54gb|AC125603.7| Homo sapiens 12 BAC RP11-497G19 (Roswell Park Can... 40 7.8
55ref|XM_312502.2| Anopheles gambiae str. PEST ENSANGP00000014846 ... 40 7.8
56gb|AC004615.1|AC004615 Homo sapiens BAC clone GS1-405L21 from 5p... 40 7.8
57emb|BX324141.5| Zebrafish DNA sequence from clone CH211-87I20 in... 40 7.8
58gb|AC102405.8| Mus musculus chromosome 3, clone RP24-318I21, com... 40 7.8
59gb|AC113464.17| Mus musculus chromosome 8, clone RP23-183P1, com... 40 7.8
60gb|AC171536.3| Mus musculus chromosome 18, clone RP23-189P10, co... 40 7.8
61gb|AC102550.9| Mus musculus chromosome 18, clone RP23-153A8, com... 40 7.8
62dbj|AP006865.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 7.8
63dbj|AP006541.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 7.8
64dbj|AP006538.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 7.8
65gb|AC011332.8| Homo sapiens chromosome 5 clone CTC-222D7, comple... 40 7.8
66emb|AL671904.8| Mouse DNA sequence from clone RP23-243J2 on chro... 40 7.8 
>ref|NM_112549.3| Arabidopsis thaliana unknown protein AT3G16760 transcript variant
           AT3G16760.2 mRNA, complete cds
          Length = 1804

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 311 gtggttttaatgctaattttggaggt 336
           ||||||||||||||||| ||||||||
Sbjct: 748 gtggttttaatgctaatcttggaggt 773
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>ref|NM_180673.1| Arabidopsis thaliana unknown protein AT3G16760 transcript variant
           AT3G16760.1 mRNA, complete cds
          Length = 1861

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 311 gtggttttaatgctaattttggaggt 336
           ||||||||||||||||| ||||||||
Sbjct: 748 gtggttttaatgctaatcttggaggt 773
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>gb|BT015102.1| Arabidopsis thaliana At3g16760 gene, complete cds
          Length = 1428

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 311 gtggttttaatgctaattttggaggt 336
           ||||||||||||||||| ||||||||
Sbjct: 548 gtggttttaatgctaatcttggaggt 573
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>gb|BT011685.1| Arabidopsis thaliana At3g16760 gene, complete cds
          Length = 1799

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 311 gtggttttaatgctaattttggaggt 336
           ||||||||||||||||| ||||||||
Sbjct: 729 gtggttttaatgctaatcttggaggt 754
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>gb|AC164296.2| Mus musculus BAC clone RP24-342N6 from chromosome 16, complete sequence
          Length = 206816

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 374   ttcttctcctatctacatttgt 395
             ||||||||||||||||||||||
Sbjct: 73219 ttcttctcctatctacatttgt 73198
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>ref|XM_548129.2| PREDICTED: Canis familiaris similar to keratin 25A (LOC491009), mRNA
          Length = 3947

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 228  acctcctccacgatggtcttcg 249
            ||||||||||||||||||||||
Sbjct: 2618 acctcctccacgatggtcttcg 2597
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>emb|BX538350.1| Cryptosporidium parvum chromosome 6, complete sequence; segment 1/4
          Length = 287050

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 525    atcttgctgaatatttattctatatt 550
              |||||||||||||||||| |||||||
Sbjct: 188075 atcttgctgaatatttatgctatatt 188100
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>ref|NM_165340.1| Drosophila melanogaster CG9317-RB, transcript variant B (CG9317),
            mRNA
          Length = 2421

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 232  cctccacgatggtcttcggcaagcgatgat 261
            ||||| ||||||||| ||||||||||||||
Sbjct: 1613 cctcctcgatggtctgcggcaagcgatgat 1584
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>ref|NM_136208.2| Drosophila melanogaster CG9317-RA, transcript variant A (CG9317),
            mRNA
          Length = 2501

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 232  cctccacgatggtcttcggcaagcgatgat 261
            ||||| ||||||||| ||||||||||||||
Sbjct: 1693 cctcctcgatggtctgcggcaagcgatgat 1664
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>gb|AY047547.1| Drosophila melanogaster GH05908 full length cDNA
          Length = 2431

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 232  cctccacgatggtcttcggcaagcgatgat 261
            ||||| ||||||||| ||||||||||||||
Sbjct: 1613 cctcctcgatggtctgcggcaagcgatgat 1584
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>gb|AC093047.1| Drosophila melanogaster, chromosome 2L, region 38D-38E, BAC clone
              BACR31P14, complete sequence
          Length = 156806

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 232    cctccacgatggtcttcggcaagcgatgat 261
              ||||| ||||||||| ||||||||||||||
Sbjct: 127368 cctcctcgatggtctgcggcaagcgatgat 127397
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>emb|BX822556.1|CNS0A600 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB48ZF02 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1414

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 311 gtggttttaatgctaattttggaggt 336
           ||||||||||||||||| ||||||||
Sbjct: 370 gtggttttaatgctaatcttggaggt 395
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>emb|BX824322.1|CNS0A5I8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH3ZD04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1812

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 311 gtggttttaatgctaattttggaggt 336
           ||||||||||||||||| ||||||||
Sbjct: 730 gtggttttaatgctaatcttggaggt 755
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>dbj|AB022217.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MGL6
          Length = 79459

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 311   gtggttttaatgctaattttggaggt 336
             ||||||||||||||||| ||||||||
Sbjct: 69810 gtggttttaatgctaatcttggaggt 69835
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>gb|AE003667.3| Drosophila melanogaster chromosome 2L, section 76 of 83 of the complete
              sequence
          Length = 257666

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 232    cctccacgatggtcttcggcaagcgatgat 261
              ||||| ||||||||| ||||||||||||||
Sbjct: 245390 cctcctcgatggtctgcggcaagcgatgat 245419
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>emb|CT009627.9| Mouse DNA sequence from clone RP23-71E4 on chromosome 16, complete
             sequence
          Length = 257276

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 374   ttcttctcctatctacatttgt 395
             ||||||||||||||||||||||
Sbjct: 12505 ttcttctcctatctacatttgt 12484
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>gb|AC004759.1|AC004759 Drosophila melanogaster DNA sequence (P1s DS04217 (D56) and DS00582
             (D85)), complete sequence
          Length = 142799

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 232   cctccacgatggtcttcggcaagcgatgat 261
             ||||| ||||||||| ||||||||||||||
Sbjct: 91565 cctcctcgatggtctgcggcaagcgatgat 91536
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>gb|AC163029.5| Mus musculus chromosome 1, clone RP23-267I23, complete sequence
          Length = 181761

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 284   tttgatggtcatgttcctttgcttt 308
             ||||||||| |||||||||||||||
Sbjct: 47603 tttgatggttatgttcctttgcttt 47579
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>emb|AL137072.8| Human DNA sequence from clone RP11-29B11 on chromosome 9 Contains the
             5' end of the TXNDC4 gene for thioredoxin domain
             containing 4 (endoplasmic reticulum) (ERP44,
             ERp44,KIAA0573), the 5' end of the INVS gene for inversin,
             a ribosomal protein S2 (RPS2) pseudogene, a novel
             pseudogene and two CpG islands, complete sequence
          Length = 172830

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 327   ttttggaggtatggaatttgt 347
             |||||||||||||||||||||
Sbjct: 61870 ttttggaggtatggaatttgt 61850
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>gb|AY152833.1| Felis catus clone BAC 244e2 major histocompatiblity complex classical
             class II region, partial sequence
          Length = 147595

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 359   ttggttctcatatcattcttc 379
             |||||||||||||||||||||
Sbjct: 42386 ttggttctcatatcattcttc 42366
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>gb|AC091221.3| Drosophila melanogaster 3L BAC RP98-9I19 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 185790

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 528    ttgctgaatatttattctatatttt 552
              ||||||||||||| |||||||||||
Sbjct: 150324 ttgctgaatatttcttctatatttt 150300
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>gb|AC005395.3| Arabidopsis thaliana chromosome 2 clone F17H15 map B68, complete
            sequence
          Length = 102004

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 429  tatcatctgttagtatgtcca 449
            |||||||||||||||||||||
Sbjct: 9395 tatcatctgttagtatgtcca 9375
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>gb|AC004747.3| Arabidopsis thaliana chromosome 2 clone T19L18 map B68, complete
             sequence
          Length = 87080

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 429   tatcatctgttagtatgtcca 449
             |||||||||||||||||||||
Sbjct: 77918 tatcatctgttagtatgtcca 77898
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>gb|AC105151.8| Mus musculus chromosome 1, clone RP23-28N2, complete sequence
          Length = 270578

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 284   tttgatggtcatgttcctttgcttt 308
             ||||||||| |||||||||||||||
Sbjct: 90333 tttgatggttatgttcctttgcttt 90357
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 8        tacatcattttcctccgttat 28
                |||||||||||||||||||||
Sbjct: 21816933 tacatcattttcctccgttat 21816953
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>dbj|AP003334.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1114B07
          Length = 148060

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 8     tacatcattttcctccgttat 28
             |||||||||||||||||||||
Sbjct: 46226 tacatcattttcctccgttat 46246
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>emb|BX537302.12| Mouse DNA sequence from clone RP23-349I9 on chromosome 7, complete
              sequence
          Length = 214393

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 126    gtttgatttcccaatatcatg 146
              |||||||||||||||||||||
Sbjct: 163162 gtttgatttcccaatatcatg 163182
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>dbj|D61393.2|ATHAVPEA Arabidopsis thaliana gene for alpha-VPE, complete cds
          Length = 4354

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 429  tatcatctgttagtatgtcca 449
            |||||||||||||||||||||
Sbjct: 1105 tatcatctgttagtatgtcca 1085
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>gb|AE003556.3| Drosophila melanogaster chromosome 3L, section 29 of 83 of the complete
             sequence
          Length = 281917

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 528   ttgctgaatatttattctatatttt 552
             ||||||||||||| |||||||||||
Sbjct: 17138 ttgctgaatatttcttctatatttt 17162
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>gb|U30246.1|HSU30246 Human bumetanide-sensitive Na-K-Cl cotransporter (NKCC1) mRNA,
            complete cds
          Length = 4098

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  tctacttcagcaatagcaac 229
            ||||||||||||||||||||
Sbjct: 1173 tctacttcagcaatagcaac 1192
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>gb|AC166289.4| Mus musculus chromosome 7, clone RP24-132A16, complete sequence
          Length = 172931

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 463    tctgttattttccttctctatgcagcct 490
              ||||| |||| |||||||||||||||||
Sbjct: 107801 tctgtaatttgccttctctatgcagcct 107828
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>ref|XM_636811.1| Dictyostelium discoideum hypothetical protein (DDB0220593), partial
            mRNA
          Length = 4003

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 98   aaacaaccaacaaattcaat 117
            ||||||||||||||||||||
Sbjct: 3972 aaacaaccaacaaattcaat 3991
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>ref|XM_526998.1| PREDICTED: Pan troglodytes solute carrier family 12
            (sodium/potassium/chloride transporters), member 2
            (LOC471620), mRNA
          Length = 3480

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  tctacttcagcaatagcaac 229
            ||||||||||||||||||||
Sbjct: 1006 tctacttcagcaatagcaac 1025
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>gb|AC146457.3| Pan troglodytes BAC clone CH251-330N17 from Y, complete sequence
          Length = 162813

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    acaatacaaagaggaatttt 90
             ||||||||||||||||||||
Sbjct: 84507 acaatacaaagaggaatttt 84526
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>gb|AC101762.7| Mus musculus chromosome 7, clone RP24-315G8, complete sequence
          Length = 185445

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 463    tctgttattttccttctctatgcagcct 490
              ||||| |||| |||||||||||||||||
Sbjct: 113021 tctgtaatttgccttctctatgcagcct 113048
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>gb|AY423549.1| Lycopersicon esculentum coronatine-insensitive 1 (Coi1) gene,
            complete cds
          Length = 9377

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 468  tattttccttctctatgcag 487
            ||||||||||||||||||||
Sbjct: 6318 tattttccttctctatgcag 6299
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>ref|NM_001046.2| Homo sapiens solute carrier family 12 (sodium/potassium/chloride
            transporters), member 2 (SLC12A2), mRNA
          Length = 6891

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  tctacttcagcaatagcaac 229
            ||||||||||||||||||||
Sbjct: 1173 tctacttcagcaatagcaac 1192
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>gb|AC159294.2| Mus musculus BAC clone RP23-287I15 from chromosome 12, complete
             sequence
          Length = 226841

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 534   aatatttattctatatttta 553
             ||||||||||||||||||||
Sbjct: 81824 aatatttattctatatttta 81843
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>emb|Z75741.1|HS107N3 Human DNA sequence from clone RP1-107N3 on chromosome X Contains a
             kinesin heavy chain member 2 (KIF2) pseudogene and a
             Huntingtin interacting protein K (HYPK) pseudogene,
             complete sequence
          Length = 174045

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 533   gaatatttattctatatttt 552
             ||||||||||||||||||||
Sbjct: 37759 gaatatttattctatatttt 37740
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>emb|AL162735.41| Human DNA sequence from clone RP11-255E17 on chromosome 1 Contains the
             gene for PTPL1-associated RhoGAP 1 (PARG1), a novel gene,
             a glyceraldehyde-3-phosphate dehydrogenase (GAPD)
             pseudogene and the 3' end of a novel gene, complete
             sequence
          Length = 160535

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 519   ttaactatcttgctgaatat 538
             ||||||||||||||||||||
Sbjct: 42437 ttaactatcttgctgaatat 42418
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>emb|AL022143.1|HS1026E2 Human DNA sequence from clone RP5-1026E2 on chromosome 1q24.1-25.3
             Contains the 3' end of a gene for a novel protein
             (KIAA1747, LOC57795), complete sequence
          Length = 100418

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    aaacgtgtaaacaatacaaa 80
             ||||||||||||||||||||
Sbjct: 33175 aaacgtgtaaacaatacaaa 33194
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>gb|BC033003.2| Homo sapiens solute carrier family 12 (sodium/potassium/chloride
            transporters), member 2, mRNA (cDNA clone MGC:26366
            IMAGE:4824556), complete cds
          Length = 4276

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  tctacttcagcaatagcaac 229
            ||||||||||||||||||||
Sbjct: 1173 tctacttcagcaatagcaac 1192
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>gb|AY280459.1| Homo sapiens bumetanide-sensitive Na-K-Cl cotransporter (SLC12A2)
            mRNA, complete cds
          Length = 4122

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  tctacttcagcaatagcaac 229
            ||||||||||||||||||||
Sbjct: 1198 tctacttcagcaatagcaac 1217
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>dbj|BS000650.1| Pan troglodytes chromosome Y clone: PTBY-008P10, complete sequence
          Length = 87031

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    acaatacaaagaggaatttt 90
             ||||||||||||||||||||
Sbjct: 53062 acaatacaaagaggaatttt 53081
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>dbj|BS000591.1| Pan troglodytes chromosome Y clone:PTB-113D22, complete sequence
          Length = 188847

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 71   acaatacaaagaggaatttt 90
            ||||||||||||||||||||
Sbjct: 9748 acaatacaaagaggaatttt 9767
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 71       acaatacaaagaggaatttt 90
                ||||||||||||||||||||
Sbjct: 17060280 acaatacaaagaggaatttt 17060261
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>gb|AC113132.3| Homo sapiens chromosome 18, clone RP11-433F3, complete sequence
          Length = 170609

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   aatatcatgagccaccaaag 157
             ||||||||||||||||||||
Sbjct: 86323 aatatcatgagccaccaaag 86342
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>gb|AC096756.3| Homo sapiens BAC clone RP11-526A4 from 4, complete sequence
          Length = 151018

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 533    gaatatttattctatatttt 552
              ||||||||||||||||||||
Sbjct: 131652 gaatatttattctatatttt 131671
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>gb|AC091906.3| Homo sapiens chromosome 5 clone RP11-193P20, complete sequence
          Length = 195510

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 474    ccttctctatgcagcctctt 493
              ||||||||||||||||||||
Sbjct: 108482 ccttctctatgcagcctctt 108501
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>emb|BX548002.12| Zebrafish DNA sequence from clone CH211-170I2 in linkage group 25,
             complete sequence
          Length = 149569

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 460   agctctgttattttccttct 479
             ||||||||||||||||||||
Sbjct: 22302 agctctgttattttccttct 22283
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>gb|AC005231.3| Homo sapiens PAC clone RP5-1186P10 from 7, complete sequence
          Length = 102112

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 532   tgaatatttattctatattttaga 555
             |||||||||||| |||||||||||
Sbjct: 89208 tgaatatttattatatattttaga 89185
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>gb|AC016749.4|AC016749 Homo sapiens clone RP11-504E20, complete sequence
          Length = 187117

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     caaagaggaattttgtgtag 96
              ||||||||||||||||||||
Sbjct: 102622 caaagaggaattttgtgtag 102603
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>gb|AC079161.5| Homo sapiens BAC clone RP11-416B10 from 2, complete sequence
          Length = 161134

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 361   ggttctcatatcattcttct 380
             ||||||||||||||||||||
Sbjct: 50335 ggttctcatatcattcttct 50354
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>gb|AC125603.7| Homo sapiens 12 BAC RP11-497G19 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 151111

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 292    tcatgttcctttgctttgtg 311
              ||||||||||||||||||||
Sbjct: 120239 tcatgttcctttgctttgtg 120220
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>ref|XM_312502.2| Anopheles gambiae str. PEST ENSANGP00000014846
           (ENSANGG00000012357), partial mRNA
          Length = 1302

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 2   accacgtacatcattttcct 21
           ||||||||||||||||||||
Sbjct: 556 accacgtacatcattttcct 575
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>gb|AC004615.1|AC004615 Homo sapiens BAC clone GS1-405L21 from 5p15.2, complete sequence
          Length = 235141

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 474   ccttctctatgcagcctctt 493
             ||||||||||||||||||||
Sbjct: 59899 ccttctctatgcagcctctt 59880
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>emb|BX324141.5| Zebrafish DNA sequence from clone CH211-87I20 in linkage group 20,
             complete sequence
          Length = 109948

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 536   tatttattctatattttaga 555
             ||||||||||||||||||||
Sbjct: 18826 tatttattctatattttaga 18845
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>gb|AC102405.8| Mus musculus chromosome 3, clone RP24-318I21, complete sequence
          Length = 181425

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 532   tgaatatttattctatattt 551
             ||||||||||||||||||||
Sbjct: 83177 tgaatatttattctatattt 83196
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>gb|AC113464.17| Mus musculus chromosome 8, clone RP23-183P1, complete sequence
          Length = 191444

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 401   tgcatgtaagaatttcttat 420
             ||||||||||||||||||||
Sbjct: 37556 tgcatgtaagaatttcttat 37537
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>gb|AC171536.3| Mus musculus chromosome 18, clone RP23-189P10, complete sequence
          Length = 209499

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 463   tctgttattttccttctcta 482
             ||||||||||||||||||||
Sbjct: 41318 tctgttattttccttctcta 41337
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>gb|AC102550.9| Mus musculus chromosome 18, clone RP23-153A8, complete sequence
          Length = 177220

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 463    tctgttattttccttctcta 482
              ||||||||||||||||||||
Sbjct: 107020 tctgttattttccttctcta 107039
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>dbj|AP006865.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT37H21, TM1032,
             complete sequence
          Length = 95067

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 384   atctacatttgtctcgatgcatgtaaga 411
             ||||||||||| || |||||||||||||
Sbjct: 20254 atctacatttgcctggatgcatgtaaga 20227
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>dbj|AP006541.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjB06D23, BM0787,
             complete sequence
          Length = 102734

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 384   atctacatttgtctcgatgcatgtaaga 411
             ||||||||||| || |||||||||||||
Sbjct: 85675 atctacatttgcctggatgcatgtaaga 85702
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>dbj|AP006538.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT18J10, TM0323a,
             complete sequence
          Length = 95559

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 384   atctacatttgtctcgatgcatgtaaga 411
             ||||||||||| || |||||||||||||
Sbjct: 50790 atctacatttgcctggatgcatgtaaga 50817
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>gb|AC011332.8| Homo sapiens chromosome 5 clone CTC-222D7, complete sequence
          Length = 144820

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   tctacttcagcaatagcaac 229
             ||||||||||||||||||||
Sbjct: 73238 tctacttcagcaatagcaac 73219
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>emb|AL671904.8| Mouse DNA sequence from clone RP23-243J2 on chromosome X, complete
             sequence
          Length = 132834

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 533   gaatatttattctatattttagat 556
             ||||||| ||||||||||||||||
Sbjct: 31344 gaatattaattctatattttagat 31367


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,570,706
Number of Sequences: 3902068
Number of extensions: 6570706
Number of successful extensions: 126065
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 125851
Number of HSP's gapped (non-prelim): 214
length of query: 577
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 554
effective length of database: 17,143,297,704
effective search space: 9497386928016
effective search space used: 9497386928016
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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