| Clone Name | bags33c01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC093133.3| Papio anubis clone RP41-57F8, complete sequence Length = 177993 Score = 42.1 bits (21), Expect = 0.62 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 tggaagtggcctgggtgctgt 69 ||||||||||||||||||||| Sbjct: 119390 tggaagtggcctgggtgctgt 119370
>emb|AL355137.23| Human DNA sequence from clone RP11-511D14 on chromosome 6p23-24.3 Contains the gene for a novel protein isentical to ribosomal protein L15 (RPL15), complete sequence Length = 190223 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 tgtaaagtgggtttggtcac 127 |||||||||||||||||||| Sbjct: 8451 tgtaaagtgggtttggtcac 8470
>gb|AC023449.11| Homo sapiens chromosome 15, clone RP11-345J18, complete sequence Length = 175336 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tggcctgggtgctgtactcc 74 |||||||||||||||||||| Sbjct: 99430 tggcctgggtgctgtactcc 99411
>gb|AC109512.12| Homo sapiens chromosome 15, clone RP11-931B1, complete sequence Length = 189975 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tggcctgggtgctgtactcc 74 |||||||||||||||||||| Sbjct: 175807 tggcctgggtgctgtactcc 175788
>gb|AC101854.8| Mus musculus chromosome 1, clone RP23-298H18, complete sequence Length = 190474 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 cccaagtgacgaacaacat 38 ||||||||||||||||||| Sbjct: 147676 cccaagtgacgaacaacat 147694
>ref|XM_993466.1| PREDICTED: Mus musculus carbamoyl-phosphate synthetase 1, transcript variant 2 (Cps1), mRNA Length = 5562 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 cccaagtgacgaacaacat 38 ||||||||||||||||||| Sbjct: 2213 cccaagtgacgaacaacat 2195
>ref|XM_986847.1| PREDICTED: Mus musculus carbamoyl-phosphate synthetase 1, transcript variant 5 (Cps1), mRNA Length = 5587 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 cccaagtgacgaacaacat 38 ||||||||||||||||||| Sbjct: 2231 cccaagtgacgaacaacat 2213
>ref|XM_912076.2| PREDICTED: Mus musculus carbamoyl-phosphate synthetase 1, transcript variant 4 (Cps1), mRNA Length = 5569 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 cccaagtgacgaacaacat 38 ||||||||||||||||||| Sbjct: 2213 cccaagtgacgaacaacat 2195
>ref|XM_129769.8| PREDICTED: Mus musculus carbamoyl-phosphate synthetase 1, transcript variant 1 (Cps1), mRNA Length = 5562 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 cccaagtgacgaacaacat 38 ||||||||||||||||||| Sbjct: 2213 cccaagtgacgaacaacat 2195 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 945,628 Number of Sequences: 3902068 Number of extensions: 945628 Number of successful extensions: 59274 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 59260 Number of HSP's gapped (non-prelim): 14 length of query: 194 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 172 effective length of database: 17,147,199,772 effective search space: 2949318360784 effective search space used: 2949318360784 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)