ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags33b21 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK120356.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067B07, full insert sequence Length = 4790 Score = 458 bits (231), Expect = e-125 Identities = 342/379 (90%) Strand = Plus / Plus Query: 163 tgattgttggcgaaatagctaattttgctgcttatgcatttgctcctgctattcttgtca 222 ||||||| || ||||| || |||||||||||||||||||||||||||||||||||||| | Sbjct: 2504 tgattgtgggagaaattgcaaattttgctgcttatgcatttgctcctgctattcttgtta 2563 Query: 223 ctcctcttggagcactcagtataataatcagtgctgcacttgctcattccattctacagg 282 |||||||||| |||||||||||||| ||||||||||||||||| || ||||||| |||| Sbjct: 2564 ctcctcttggggcactcagtataatcatcagtgctgcacttgcacacgccattctgcagg 2623 Query: 283 agaaactgcacacctttggtatacttggttgtgttctttgtgtagtcggatcgatcacaa 342 ||||||| ||||||||||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 2624 agaaactacacacctttggcatacttggttgtgttctttgtgtagttggatctatcacaa 2683 Query: 343 ttgcactccatgctccacaggagcgtgatattgattctgtaagggaagtttgggatcttg 402 ||| ||||||||||||||||||||| | || |||||||||||||||||||||||||||| Sbjct: 2684 ttgtactccatgctccacaggagcgcaacatcgattctgtaagggaagtttgggatcttg 2743 Query: 403 caactgagccagcttttctttcatatgcgaccgtagtagtggtggcagccttgttcctta 462 ||||||| |||| |||||||| || || | ||||||| | ||||| || | |||| Sbjct: 2744 caactgaaccaggttttctttgctacgctgctatagtagttgccgcagcactggtgctta 2803 Query: 463 tatattttgttgtccctcaacatggacaaacaaacatcatggtgtacattggagtctgtt 522 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2804 tatattttgttgtccctcaacatggacaaacaaacatcatggtgtacatcggagtctgtt 2863 Query: 523 ctcttctaggatctctcac 541 ||||||||||||||||||| Sbjct: 2864 ctcttctaggatctctcac 2882 Score = 131 bits (66), Expect = 3e-27 Identities = 84/90 (93%) Strand = Plus / Plus Query: 14 cctcgcggtgtcgtcgagcgccttcatcggtgccagcttcatcgtcaagaagatggggct 73 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 211 cctcgcggtgtcgtcgagcgccttcatcggggcgagcttcatcgtcaagaagatggggct 270 Query: 74 cagacgggccgcagattccggcgtccgcgc 103 ||| ||||||| || |||||||||||||| Sbjct: 271 caggagggccgccgactccggcgtccgcgc 300 Score = 123 bits (62), Expect = 8e-25 Identities = 80/86 (93%) Strand = Plus / Plus Query: 546 atgagtgtaaaggctctcggaattgcattgaagttaacattctcgggagtgaaccaatta 605 ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||| ||| Sbjct: 2995 atgagtgtaaaagctctcggcattgcattgaagttaacattctcaggagtgaaccagtta 3054 Query: 606 ttttatcctcagacctgggcttttgc 631 || ||||||||||| ||||||||||| Sbjct: 3055 ttctatcctcagacatgggcttttgc 3080 Score = 69.9 bits (35), Expect = 1e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 108 tatggagggtattcttacttagtggagccactttggtggataggcatgatttcta 162 |||||||| | |||||||||| ||||||| || |||||||||||||||||||||| Sbjct: 1713 tatggaggattttcttacttaatggagcctctatggtggataggcatgatttcta 1767
>gb|AC139170.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0058P12, complete sequence Length = 173073 Score = 214 bits (108), Expect = 3e-52 Identities = 150/164 (91%) Strand = Plus / Plus Query: 251 cagtgctgcacttgctcattccattctacaggagaaactgcacacctttggtatacttgg 310 ||||||||||||||| || ||||||| ||||||||||| ||||||||||| |||||||| Sbjct: 155841 cagtgctgcacttgcacacgccattctgcaggagaaactacacacctttggcatacttgg 155900 Query: 311 ttgtgttctttgtgtagtcggatcgatcacaattgcactccatgctccacaggagcgtga 370 |||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||| | Sbjct: 155901 ttgtgttctttgtgtagttggatctatcacaattgtactccatgctccacaggagcgcaa 155960 Query: 371 tattgattctgtaagggaagtttgggatcttgcaactgagccag 414 || ||||||||||||||||||||||||||||||||||| |||| Sbjct: 155961 catcgattctgtaagggaagtttgggatcttgcaactgaaccag 156004 Score = 157 bits (79), Expect = 5e-35 Identities = 82/83 (98%) Strand = Plus / Plus Query: 459 cttatatattttgttgtccctcaacatggacaaacaaacatcatggtgtacattggagtc 518 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 156159 cttatatattttgttgtccctcaacatggacaaacaaacatcatggtgtacatcggagtc 156218 Query: 519 tgttctcttctaggatctctcac 541 ||||||||||||||||||||||| Sbjct: 156219 tgttctcttctaggatctctcac 156241 Score = 131 bits (66), Expect = 3e-27 Identities = 84/90 (93%) Strand = Plus / Plus Query: 14 cctcgcggtgtcgtcgagcgccttcatcggtgccagcttcatcgtcaagaagatggggct 73 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 153365 cctcgcggtgtcgtcgagcgccttcatcggggcgagcttcatcgtcaagaagatggggct 153424 Query: 74 cagacgggccgcagattccggcgtccgcgc 103 ||| ||||||| || |||||||||||||| Sbjct: 153425 caggagggccgccgactccggcgtccgcgc 153454 Score = 125 bits (63), Expect = 2e-25 Identities = 84/91 (92%) Strand = Plus / Plus Query: 163 tgattgttggcgaaatagctaattttgctgcttatgcatttgctcctgctattcttgtca 222 ||||||| || ||||| || |||||||||||||||||||||||||||||||||||||| | Sbjct: 155658 tgattgtgggagaaattgcaaattttgctgcttatgcatttgctcctgctattcttgtta 155717 Query: 223 ctcctcttggagcactcagtataataatcag 253 |||||||||| |||||||||||||| ||||| Sbjct: 155718 ctcctcttggggcactcagtataatcatcag 155748 Score = 123 bits (62), Expect = 8e-25 Identities = 80/86 (93%) Strand = Plus / Plus Query: 546 atgagtgtaaaggctctcggaattgcattgaagttaacattctcgggagtgaaccaatta 605 ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||| ||| Sbjct: 156354 atgagtgtaaaagctctcggcattgcattgaagttaacattctcaggagtgaaccagtta 156413 Query: 606 ttttatcctcagacctgggcttttgc 631 || ||||||||||| ||||||||||| Sbjct: 156414 ttctatcctcagacatgggcttttgc 156439 Score = 69.9 bits (35), Expect = 1e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 108 tatggagggtattcttacttagtggagccactttggtggataggcatgatttcta 162 |||||||| | |||||||||| ||||||| || |||||||||||||||||||||| Sbjct: 154867 tatggaggattttcttacttaatggagcctctatggtggataggcatgatttcta 154921
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 214 bits (108), Expect = 3e-52 Identities = 150/164 (91%) Strand = Plus / Minus Query: 251 cagtgctgcacttgctcattccattctacaggagaaactgcacacctttggtatacttgg 310 ||||||||||||||| || ||||||| ||||||||||| ||||||||||| |||||||| Sbjct: 4839052 cagtgctgcacttgcacacgccattctgcaggagaaactacacacctttggcatacttgg 4838993 Query: 311 ttgtgttctttgtgtagtcggatcgatcacaattgcactccatgctccacaggagcgtga 370 |||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||| | Sbjct: 4838992 ttgtgttctttgtgtagttggatctatcacaattgtactccatgctccacaggagcgcaa 4838933 Query: 371 tattgattctgtaagggaagtttgggatcttgcaactgagccag 414 || ||||||||||||||||||||||||||||||||||| |||| Sbjct: 4838932 catcgattctgtaagggaagtttgggatcttgcaactgaaccag 4838889 Score = 157 bits (79), Expect = 5e-35 Identities = 82/83 (98%) Strand = Plus / Minus Query: 459 cttatatattttgttgtccctcaacatggacaaacaaacatcatggtgtacattggagtc 518 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 4838734 cttatatattttgttgtccctcaacatggacaaacaaacatcatggtgtacatcggagtc 4838675 Query: 519 tgttctcttctaggatctctcac 541 ||||||||||||||||||||||| Sbjct: 4838674 tgttctcttctaggatctctcac 4838652 Score = 131 bits (66), Expect = 3e-27 Identities = 84/90 (93%) Strand = Plus / Minus Query: 14 cctcgcggtgtcgtcgagcgccttcatcggtgccagcttcatcgtcaagaagatggggct 73 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 4841528 cctcgcggtgtcgtcgagcgccttcatcggggcgagcttcatcgtcaagaagatggggct 4841469 Query: 74 cagacgggccgcagattccggcgtccgcgc 103 ||| ||||||| || |||||||||||||| Sbjct: 4841468 caggagggccgccgactccggcgtccgcgc 4841439 Score = 125 bits (63), Expect = 2e-25 Identities = 84/91 (92%) Strand = Plus / Minus Query: 163 tgattgttggcgaaatagctaattttgctgcttatgcatttgctcctgctattcttgtca 222 ||||||| || ||||| || |||||||||||||||||||||||||||||||||||||| | Sbjct: 4839235 tgattgtgggagaaattgcaaattttgctgcttatgcatttgctcctgctattcttgtta 4839176 Query: 223 ctcctcttggagcactcagtataataatcag 253 |||||||||| |||||||||||||| ||||| Sbjct: 4839175 ctcctcttggggcactcagtataatcatcag 4839145 Score = 123 bits (62), Expect = 8e-25 Identities = 80/86 (93%) Strand = Plus / Minus Query: 546 atgagtgtaaaggctctcggaattgcattgaagttaacattctcgggagtgaaccaatta 605 ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||| ||| Sbjct: 4838539 atgagtgtaaaagctctcggcattgcattgaagttaacattctcaggagtgaaccagtta 4838480 Query: 606 ttttatcctcagacctgggcttttgc 631 || ||||||||||| ||||||||||| Sbjct: 4838479 ttctatcctcagacatgggcttttgc 4838454 Score = 69.9 bits (35), Expect = 1e-08 Identities = 50/55 (90%) Strand = Plus / Minus Query: 108 tatggagggtattcttacttagtggagccactttggtggataggcatgatttcta 162 |||||||| | |||||||||| ||||||| || |||||||||||||||||||||| Sbjct: 4840026 tatggaggattttcttacttaatggagcctctatggtggataggcatgatttcta 4839972
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 214 bits (108), Expect = 3e-52 Identities = 150/164 (91%) Strand = Plus / Minus Query: 251 cagtgctgcacttgctcattccattctacaggagaaactgcacacctttggtatacttgg 310 ||||||||||||||| || ||||||| ||||||||||| ||||||||||| |||||||| Sbjct: 4857836 cagtgctgcacttgcacacgccattctgcaggagaaactacacacctttggcatacttgg 4857777 Query: 311 ttgtgttctttgtgtagtcggatcgatcacaattgcactccatgctccacaggagcgtga 370 |||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||| | Sbjct: 4857776 ttgtgttctttgtgtagttggatctatcacaattgtactccatgctccacaggagcgcaa 4857717 Query: 371 tattgattctgtaagggaagtttgggatcttgcaactgagccag 414 || ||||||||||||||||||||||||||||||||||| |||| Sbjct: 4857716 catcgattctgtaagggaagtttgggatcttgcaactgaaccag 4857673 Score = 157 bits (79), Expect = 5e-35 Identities = 82/83 (98%) Strand = Plus / Minus Query: 459 cttatatattttgttgtccctcaacatggacaaacaaacatcatggtgtacattggagtc 518 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 4857518 cttatatattttgttgtccctcaacatggacaaacaaacatcatggtgtacatcggagtc 4857459 Query: 519 tgttctcttctaggatctctcac 541 ||||||||||||||||||||||| Sbjct: 4857458 tgttctcttctaggatctctcac 4857436 Score = 131 bits (66), Expect = 3e-27 Identities = 84/90 (93%) Strand = Plus / Minus Query: 14 cctcgcggtgtcgtcgagcgccttcatcggtgccagcttcatcgtcaagaagatggggct 73 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 4860312 cctcgcggtgtcgtcgagcgccttcatcggggcgagcttcatcgtcaagaagatggggct 4860253 Query: 74 cagacgggccgcagattccggcgtccgcgc 103 ||| ||||||| || |||||||||||||| Sbjct: 4860252 caggagggccgccgactccggcgtccgcgc 4860223 Score = 125 bits (63), Expect = 2e-25 Identities = 84/91 (92%) Strand = Plus / Minus Query: 163 tgattgttggcgaaatagctaattttgctgcttatgcatttgctcctgctattcttgtca 222 ||||||| || ||||| || |||||||||||||||||||||||||||||||||||||| | Sbjct: 4858019 tgattgtgggagaaattgcaaattttgctgcttatgcatttgctcctgctattcttgtta 4857960 Query: 223 ctcctcttggagcactcagtataataatcag 253 |||||||||| |||||||||||||| ||||| Sbjct: 4857959 ctcctcttggggcactcagtataatcatcag 4857929 Score = 123 bits (62), Expect = 8e-25 Identities = 80/86 (93%) Strand = Plus / Minus Query: 546 atgagtgtaaaggctctcggaattgcattgaagttaacattctcgggagtgaaccaatta 605 ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||| ||| Sbjct: 4857323 atgagtgtaaaagctctcggcattgcattgaagttaacattctcaggagtgaaccagtta 4857264 Query: 606 ttttatcctcagacctgggcttttgc 631 || ||||||||||| ||||||||||| Sbjct: 4857263 ttctatcctcagacatgggcttttgc 4857238 Score = 69.9 bits (35), Expect = 1e-08 Identities = 50/55 (90%) Strand = Plus / Minus Query: 108 tatggagggtattcttacttagtggagccactttggtggataggcatgatttcta 162 |||||||| | |||||||||| ||||||| || |||||||||||||||||||||| Sbjct: 4858810 tatggaggattttcttacttaatggagcctctatggtggataggcatgatttcta 4858756
>emb|BX814885.1|CNS0ABHS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS16ZC03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1411 Score = 115 bits (58), Expect = 2e-22 Identities = 151/182 (82%) Strand = Plus / Plus Query: 105 ggttatggagggtattcttacttagtggagccactttggtggataggcatgatttctatg 164 |||| |||||| ||||||||| | | ||||| || |||||| |||||||||| | ||| Sbjct: 291 ggttctggaggttattcttacctgcttgagcctctctggtgggtaggcatgataacgatg 350 Query: 165 attgttggcgaaatagctaattttgctgcttatgcatttgctcctgctattcttgtcact 224 ||||| || ||||| || ||||||||||||||||| ||||| ||||| ||| | || ||| Sbjct: 351 attgtaggggaaattgccaattttgctgcttatgcctttgcgcctgccattttagtaact 410 Query: 225 cctcttggagcactcagtataataatcagtgctgcacttgctcattccattctacaggag 284 |||||||| || ||||| ||||| ||||||||||| ||||||||| ||| ||||| ||| Sbjct: 411 cctcttggtgctctcagcataattatcagtgctgctcttgctcatgtcatcctacacgag 470 Query: 285 aa 286 || Sbjct: 471 aa 472
>ref|NM_103169.2| Arabidopsis thaliana unknown protein AT1G34470 mRNA, complete cds Length = 1656 Score = 113 bits (57), Expect = 7e-22 Identities = 138/165 (83%) Strand = Plus / Plus Query: 105 ggttatggagggtattcttacttagtggagccactttggtggataggcatgatttctatg 164 |||| |||||| ||||||||| | | ||||| || |||||| |||||||||| | ||| Sbjct: 437 ggttctggaggttattcttacctgcttgagcctctctggtgggtaggcatgataacgatg 496 Query: 165 attgttggcgaaatagctaattttgctgcttatgcatttgctcctgctattcttgtcact 224 ||||| || ||||| || ||||||||||||||||| ||||| ||||| ||| | || ||| Sbjct: 497 attgtaggggaaattgccaattttgctgcttatgcctttgcgcctgccattttagtaact 556 Query: 225 cctcttggagcactcagtataataatcagtgctgcacttgctcat 269 |||||||| || ||||| ||||| ||||||||||| ||||||||| Sbjct: 557 cctcttggtgctctcagcataattatcagtgctgctcttgctcat 601
>gb|BT024742.1| Arabidopsis thaliana At1g34470 mRNA, complete cds Length = 1107 Score = 113 bits (57), Expect = 7e-22 Identities = 138/165 (83%) Strand = Plus / Plus Query: 105 ggttatggagggtattcttacttagtggagccactttggtggataggcatgatttctatg 164 |||| |||||| ||||||||| | | ||||| || |||||| |||||||||| | ||| Sbjct: 163 ggttctggaggttattcttacctgcttgagcctctctggtgggtaggcatgataacgatg 222 Query: 165 attgttggcgaaatagctaattttgctgcttatgcatttgctcctgctattcttgtcact 224 ||||| || ||||| || ||||||||||||||||| ||||| ||||| ||| | || ||| Sbjct: 223 attgtaggggaaattgccaattttgctgcttatgcctttgcgcctgccattttagtaact 282 Query: 225 cctcttggagcactcagtataataatcagtgctgcacttgctcat 269 |||||||| || ||||| ||||| ||||||||||| ||||||||| Sbjct: 283 cctcttggtgctctcagcataattatcagtgctgctcttgctcat 327
>gb|AY088955.1| Arabidopsis thaliana clone 110782 mRNA, complete sequence Length = 1565 Score = 113 bits (57), Expect = 7e-22 Identities = 138/165 (83%) Strand = Plus / Plus Query: 105 ggttatggagggtattcttacttagtggagccactttggtggataggcatgatttctatg 164 |||| |||||| ||||||||| | | ||||| || |||||| |||||||||| | ||| Sbjct: 437 ggttctggaggttattcttacctgcttgagcctctctggtgggtaggcatgataacgatg 496 Query: 165 attgttggcgaaatagctaattttgctgcttatgcatttgctcctgctattcttgtcact 224 ||||| || ||||| || ||||||||||||||||| ||||| ||||| ||| | || ||| Sbjct: 497 attgtaggggaaattgccaattttgctgcttatgcctttgcgcctgccattttagtaact 556 Query: 225 cctcttggagcactcagtataataatcagtgctgcacttgctcat 269 |||||||| || ||||| ||||| ||||||||||| ||||||||| Sbjct: 557 cctcttggtgctctcagcataattatcagtgctgctcttgctcat 601
>dbj|AK073285.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027O22, full insert sequence Length = 1316 Score = 93.7 bits (47), Expect = 7e-16 Identities = 116/139 (83%) Strand = Plus / Plus Query: 132 gagccactttggtggataggcatgatttctatgattgttggcgaaatagctaattttgct 191 ||||| ||||||||| | ||||||||| | ||| ||||||| ||| | || || ||||| Sbjct: 225 gagcctctttggtgggttggcatgattacaatggttgttggggaagttgcaaactttgca 284 Query: 192 gcttatgcatttgctcctgctattcttgtcactcctcttggagcactcagtataataatc 251 ||||||||||||||||| |||||| | |||||||||||||| || ||||| || || ||| Sbjct: 285 gcttatgcatttgctccagctattttggtcactcctcttggtgctctcagcattatcatc 344 Query: 252 agtgctgcacttgctcatt 270 |||||| |||||| |||| Sbjct: 345 agtgctatacttgcgcatt 363 Score = 48.1 bits (24), Expect = 0.036 Identities = 36/40 (90%) Strand = Plus / Plus Query: 36 ttcatcggtgccagcttcatcgtcaagaagatggggctca 75 |||||||| |||||||||||| ||||||||| ||| |||| Sbjct: 128 ttcatcggcgccagcttcatcatcaagaagaagggcctca 167
>dbj|AK121054.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055P22, full insert sequence Length = 1972 Score = 87.7 bits (44), Expect = 4e-14 Identities = 179/224 (79%) Strand = Plus / Plus Query: 35 cttcatcggtgccagcttcatcgtcaagaagatggggctcagacgggccgcagattccgg 94 ||||||||| |||||||||||||||||||||| ||| |||| ||||| | ||||| Sbjct: 616 cttcatcggcgccagcttcatcgtcaagaagaagggcctcaagaaggccggcgcctccgg 675 Query: 95 cgtccgcgcgggttatggagggtattcttacttagtggagccactttggtggataggcat 154 ||||||||| ||| ||| || || |||||||| | || ||| | |||||| ||| || Sbjct: 676 cgtccgcgcaggtgttggtggctactcttacttgcttgaaccattgtggtgggcaggaat 735 Query: 155 gatttctatgattgttggcgaaatagctaattttgctgcttatgcatttgctcctgctat 214 || | ||||||||||| ||||| || || || || |||||||| |||||||||||||| Sbjct: 736 gacagcaatgattgttggagaaatcgccaacttcgcagcttatgcttttgctcctgctat 795 Query: 215 tcttgtcactcctcttggagcactcagtataataatcagtgctg 258 | |||||||| ||||| ||||| || ||||| |||||||||| Sbjct: 796 cttggtcactccacttggtgcacttagcataattatcagtgctg 839 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 498 atcatggtgtacattggagtctgttctct 526 ||||||||||| ||||| ||||||||||| Sbjct: 1079 atcatggtgtatattggtgtctgttctct 1107
>ref|NM_105848.3| Arabidopsis thaliana unknown protein AT1G71900 mRNA, complete cds Length = 1741 Score = 85.7 bits (43), Expect = 2e-13 Identities = 106/127 (83%) Strand = Plus / Plus Query: 132 gagccactttggtggataggcatgatttctatgattgttggcgaaatagctaattttgct 191 ||||| ||||||||||| ||||||| | ||| | |||| ||||| || ||||| ||| Sbjct: 456 gagcctctttggtggattggcatgacgacaatgttacttggtgaaattgccaatttcgct 515 Query: 192 gcttatgcatttgctcctgctattcttgtcactcctcttggagcactcagtataataatc 251 |||||||||||||| |||||||| |||||||||||||| || || ||||||| || ||| Sbjct: 516 gcttatgcatttgcgcctgctatacttgtcactcctctaggtgctgtcagtatcattatc 575 Query: 252 agtgctg 258 ||||||| Sbjct: 576 agtgctg 582 Score = 44.1 bits (22), Expect = 0.56 Identities = 43/50 (86%) Strand = Plus / Plus Query: 366 cgtgatattgattctgtaagggaagtttgggatcttgcaactgagccagc 415 ||||| ||||| ||||| | ||||||||| ||||||||||||| ||||| Sbjct: 690 cgtgaaattgactctgtgattgaagtttggaatcttgcaactgaaccagc 739
>gb|AY079390.1| Arabidopsis thaliana unknown protein (At1g71900) mRNA, complete cds Length = 1063 Score = 85.7 bits (43), Expect = 2e-13 Identities = 106/127 (83%) Strand = Plus / Plus Query: 132 gagccactttggtggataggcatgatttctatgattgttggcgaaatagctaattttgct 191 ||||| ||||||||||| ||||||| | ||| | |||| ||||| || ||||| ||| Sbjct: 190 gagcctctttggtggattggcatgacgacaatgttacttggtgaaattgccaatttcgct 249 Query: 192 gcttatgcatttgctcctgctattcttgtcactcctcttggagcactcagtataataatc 251 |||||||||||||| |||||||| |||||||||||||| || || ||||||| || ||| Sbjct: 250 gcttatgcatttgcgcctgctatacttgtcactcctctaggtgctgtcagtatcattatc 309 Query: 252 agtgctg 258 ||||||| Sbjct: 310 agtgctg 316 Score = 44.1 bits (22), Expect = 0.56 Identities = 43/50 (86%) Strand = Plus / Plus Query: 366 cgtgatattgattctgtaagggaagtttgggatcttgcaactgagccagc 415 ||||| ||||| ||||| | ||||||||| ||||||||||||| ||||| Sbjct: 424 cgtgaaattgactctgtgattgaagtttggaatcttgcaactgaaccagc 473
>gb|AY046035.1| Arabidopsis thaliana unknown protein (At1g71900) mRNA, complete cds Length = 1748 Score = 85.7 bits (43), Expect = 2e-13 Identities = 106/127 (83%) Strand = Plus / Plus Query: 132 gagccactttggtggataggcatgatttctatgattgttggcgaaatagctaattttgct 191 ||||| ||||||||||| ||||||| | ||| | |||| ||||| || ||||| ||| Sbjct: 456 gagcctctttggtggattggcatgacgacaatgttacttggtgaaattgccaatttcgct 515 Query: 192 gcttatgcatttgctcctgctattcttgtcactcctcttggagcactcagtataataatc 251 |||||||||||||| |||||||| |||||||||||||| || || ||||||| || ||| Sbjct: 516 gcttatgcatttgcgcctgctatacttgtcactcctctaggtgctgtcagtatcattatc 575 Query: 252 agtgctg 258 ||||||| Sbjct: 576 agtgctg 582 Score = 44.1 bits (22), Expect = 0.56 Identities = 43/50 (86%) Strand = Plus / Plus Query: 366 cgtgatattgattctgtaagggaagtttgggatcttgcaactgagccagc 415 ||||| ||||| ||||| | ||||||||| ||||||||||||| ||||| Sbjct: 690 cgtgaaattgactctgtgattgaagtttggaatcttgcaactgaaccagc 739
>emb|BX816811.1|CNS0AAMN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH6ZA08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1677 Score = 85.7 bits (43), Expect = 2e-13 Identities = 106/127 (83%) Strand = Plus / Plus Query: 132 gagccactttggtggataggcatgatttctatgattgttggcgaaatagctaattttgct 191 ||||| ||||||||||| ||||||| | ||| | |||| ||||| || ||||| ||| Sbjct: 396 gagcctctttggtggattggcatgacgacaatgttacttggtgaaattgccaatttcgct 455 Query: 192 gcttatgcatttgctcctgctattcttgtcactcctcttggagcactcagtataataatc 251 |||||||||||||| |||||||| |||||||||||||| || || ||||||| || ||| Sbjct: 456 gcttatgcatttgcgcctgctatacttgtcactcctctaggtgctgtcagtatcattatc 515 Query: 252 agtgctg 258 ||||||| Sbjct: 516 agtgctg 522
>ref|NM_117032.2| Arabidopsis thaliana unknown protein AT4G09640 mRNA, complete cds Length = 1661 Score = 77.8 bits (39), Expect = 4e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 110 tggagggtattcttacttagtggagccactttggtggataggcatgatttctatgattgt 169 |||||| ||||||||||| | ||||| || ||||||||||| ||||| | |||||||| Sbjct: 452 tggaggctattcttacttgcttgagcctctctggtggataggaatgataacaatgattgt 511 Query: 170 tggcgaaatagctaattttgctgcttatgcatttgctcctgctattcttgtcactcctct 229 || ||||| || || |||||||| ||||| ||||| ||||| ||||| || |||||||| Sbjct: 512 gggggaaattgcaaactttgctgcgtatgcgtttgcacctgccattctagttactcctct 571 Query: 230 tgg 232 ||| Sbjct: 572 tgg 574
>gb|BT005717.1| Arabidopsis thaliana clone RAFL14-89-F18 (R20169) At4g09640 mRNA, complete sequence Length = 1676 Score = 77.8 bits (39), Expect = 4e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 110 tggagggtattcttacttagtggagccactttggtggataggcatgatttctatgattgt 169 |||||| ||||||||||| | ||||| || ||||||||||| ||||| | |||||||| Sbjct: 452 tggaggctattcttacttgcttgagcctctctggtggataggaatgataacaatgattgt 511 Query: 170 tggcgaaatagctaattttgctgcttatgcatttgctcctgctattcttgtcactcctct 229 || ||||| || || |||||||| ||||| ||||| ||||| ||||| || |||||||| Sbjct: 512 gggggaaattgcaaactttgctgcgtatgcgtttgcacctgccattctagttactcctct 571 Query: 230 tgg 232 ||| Sbjct: 572 tgg 574
>gb|AY107039.1| Zea mays PCO071030 mRNA sequence Length = 934 Score = 77.8 bits (39), Expect = 4e-11 Identities = 156/195 (80%) Strand = Plus / Plus Query: 35 cttcatcggtgccagcttcatcgtcaagaagatggggctcagacgggccgcagattccgg 94 ||||||||| ||||||||||| ||||||||| ||| |||| ||||||| ||||| Sbjct: 432 cttcatcggcgccagcttcattatcaagaagaagggactcaagaaggccgcatcctccgg 491 Query: 95 cgtccgcgcgggttatggagggtattcttacttagtggagccactttggtggataggcat 154 |||| | ||||| ||| || |||||||| ||| ||||| ||||||||| | ||||| Sbjct: 492 cgtcagagcgggggttggtggctattcttatttatatgagcctctttggtgggttggcat 551 Query: 155 gatttctatgattgttggcgaaatagctaattttgctgcttatgcatttgctcctgctat 214 ||| | ||||||||||| ||| | || ||||| || |||||||||||||| || ||||| Sbjct: 552 gataacaatgattgttggagaagttgcaaatttcgcagcttatgcatttgcaccggctat 611 Query: 215 tcttgtcactcctct 229 | | ||||||||||| Sbjct: 612 tttggtcactcctct 626
>gb|AC146683.11| Medicago truncatula clone mth2-179n10, complete sequence Length = 131133 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 163 tgattgttggcgaaatagctaattttgctgcttatgcatttgctcctgctattcttgtca 222 |||||||||| |||||||||||||| || |||||||||||||| ||||| || ||||| | Sbjct: 73314 tgattgttggggaaatagctaatttcgcagcttatgcatttgcacctgccatccttgtaa 73255 Query: 223 ctcct 227 ||||| Sbjct: 73254 ctcct 73250
>gb|AC021665.7|AC021665 Arabidopsis thaliana chromosome 1 BAC F17M19 genomic sequence, complete sequence Length = 80413 Score = 73.8 bits (37), Expect = 6e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 169 ttggcgaaatagctaattttgctgcttatgcatttgctcctgctattcttgtcactcctc 228 |||| ||||| || ||||| ||||||||||||||||| |||||||| ||||||||||||| Sbjct: 34745 ttggtgaaattgccaatttcgctgcttatgcatttgcgcctgctatacttgtcactcctc 34804 Query: 229 t 229 | Sbjct: 34805 t 34805 Score = 42.1 bits (21), Expect = 2.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 366 cgtgatattgattctgtaagggaagtttgggatcttgcaactgagccag 414 ||||| ||||| ||||| | ||||||||| ||||||||||||| |||| Sbjct: 35045 cgtgaaattgactctgtgattgaagtttggaatcttgcaactgaaccag 35093
>gb|AC023913.7|AC023913 Arabidopsis thaliana chromosome 1 BAC F7P12 genomic sequence, complete sequence Length = 82214 Score = 69.9 bits (35), Expect = 1e-08 Identities = 77/91 (84%) Strand = Plus / Minus Query: 163 tgattgttggcgaaatagctaattttgctgcttatgcatttgctcctgctattcttgtca 222 ||||||| || ||||| || ||||||||||||||||| ||||| ||||| ||| | || | Sbjct: 3951 tgattgtaggggaaattgccaattttgctgcttatgcctttgcgcctgccattttagtaa 3892 Query: 223 ctcctcttggagcactcagtataataatcag 253 |||||||||| || ||||| ||||| ||||| Sbjct: 3891 ctcctcttggtgctctcagcataattatcag 3861
>gb|AC023279.2|AC023279 Genomic sequence for Arabidopsis thaliana BAC F12K21 from chromosome I, complete sequence Length = 117585 Score = 69.9 bits (35), Expect = 1e-08 Identities = 77/91 (84%) Strand = Plus / Minus Query: 163 tgattgttggcgaaatagctaattttgctgcttatgcatttgctcctgctattcttgtca 222 ||||||| || ||||| || ||||||||||||||||| ||||| ||||| ||| | || | Sbjct: 88670 tgattgtaggggaaattgccaattttgctgcttatgcctttgcgcctgccattttagtaa 88611 Query: 223 ctcctcttggagcactcagtataataatcag 253 |||||||||| || ||||| ||||| ||||| Sbjct: 88610 ctcctcttggtgctctcagcataattatcag 88580
>ref|XM_463526.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1779 Score = 67.9 bits (34), Expect = 4e-08 Identities = 115/142 (80%) Strand = Plus / Plus Query: 280 aggagaaactgcacacctttggtatacttggttgtgttctttgtgtagtcggatcgatca 339 ||||||| || |||| |||||||||||||||||||| || ||||| || || || | | Sbjct: 359 aggagaagcttcacatatttggtatacttggttgtgtcctctgtgttgtgggttcaacaa 418 Query: 340 caattgcactccatgctccacaggagcgtgatattgattctgtaagggaagtttgggatc 399 | |||| || ||||| || ||||||||||| |||||||||||| ||||| |||| || Sbjct: 419 ccattgtgcttcatgcgccgcaggagcgtgaaattgattctgtagctgaagtgtgggctc 478 Query: 400 ttgcaactgagccagcttttct 421 |||| ||||| ||||| ||||| Sbjct: 479 ttgctactgaaccagcctttct 500 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 35 cttcatcggtgccagcttcatcgtcaagaagatggggctca 75 ||||||||| |||||||||||||||||||||| |||||||| Sbjct: 114 cttcatcggcgccagcttcatcgtcaagaagaaggggctca 154 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 153 atgatttctatgattgttggcgaaatagctaattttgctgcttatgcatttgctcctgct 212 |||||| | ||||||||||| ||| ||||||| ||||| || ||||| |||||||||||| Sbjct: 232 atgattacaatgattgttggagaagtagctaactttgcagcatatgcctttgctcctgct 291 Query: 213 at 214 || Sbjct: 292 at 293
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 18 gcggtgtcgtcgagcgccttcatcggtgccagcttcatcgtcaagaagat 67 |||||| |||| |||||||||||||| |||||||||||| |||||||||| Sbjct: 29870741 gcggtggcgtccagcgccttcatcggcgccagcttcatcctcaagaagat 29870692
>dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481E08 Length = 171965 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 18 gcggtgtcgtcgagcgccttcatcggtgccagcttcatcgtcaagaagat 67 |||||| |||| |||||||||||||| |||||||||||| |||||||||| Sbjct: 66254 gcggtggcgtccagcgccttcatcggcgccagcttcatcctcaagaagat 66205
>dbj|AK121440.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140L10, full insert sequence Length = 1466 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 18 gcggtgtcgtcgagcgccttcatcggtgccagcttcatcgtcaagaagat 67 |||||| |||| |||||||||||||| |||||||||||| |||||||||| Sbjct: 250 gcggtggcgtccagcgccttcatcggcgccagcttcatcctcaagaagat 299
>dbj|AK102845.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033110A12, full insert sequence Length = 1821 Score = 67.9 bits (34), Expect = 4e-08 Identities = 115/142 (80%) Strand = Plus / Plus Query: 280 aggagaaactgcacacctttggtatacttggttgtgttctttgtgtagtcggatcgatca 339 ||||||| || |||| |||||||||||||||||||| || ||||| || || || | | Sbjct: 714 aggagaagcttcacatatttggtatacttggttgtgtcctctgtgttgtgggttcaacaa 773 Query: 340 caattgcactccatgctccacaggagcgtgatattgattctgtaagggaagtttgggatc 399 | |||| || ||||| || ||||||||||| |||||||||||| ||||| |||| || Sbjct: 774 ccattgtgcttcatgcgccgcaggagcgtgaaattgattctgtagctgaagtgtgggctc 833 Query: 400 ttgcaactgagccagcttttct 421 |||| ||||| ||||| ||||| Sbjct: 834 ttgctactgaaccagcctttct 855 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 35 cttcatcggtgccagcttcatcgtcaagaagatggggctca 75 ||||||||| |||||||||||||||||||||| |||||||| Sbjct: 469 cttcatcggcgccagcttcatcgtcaagaagaaggggctca 509 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 153 atgatttctatgattgttggcgaaatagctaattttgctgcttatgcatttgctcctgct 212 |||||| | ||||||||||| ||| ||||||| ||||| || ||||| |||||||||||| Sbjct: 587 atgattacaatgattgttggagaagtagctaactttgcagcatatgcctttgctcctgct 646 Query: 213 at 214 || Sbjct: 647 at 648
>dbj|AK058265.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-A05, full insert sequence Length = 1157 Score = 67.9 bits (34), Expect = 4e-08 Identities = 115/142 (80%) Strand = Plus / Plus Query: 280 aggagaaactgcacacctttggtatacttggttgtgttctttgtgtagtcggatcgatca 339 ||||||| || |||| |||||||||||||||||||| || ||||| || || || | | Sbjct: 123 aggagaagcttcacatatttggtatacttggttgtgtcctctgtgttgtgggttcaacaa 182 Query: 340 caattgcactccatgctccacaggagcgtgatattgattctgtaagggaagtttgggatc 399 | |||| || ||||| || ||||||||||| |||||||||||| ||||| |||| || Sbjct: 183 ccattgtgcttcatgcgccgcaggagcgtgaaattgattctgtagctgaagtgtgggctc 242 Query: 400 ttgcaactgagccagcttttct 421 |||| ||||| ||||| ||||| Sbjct: 243 ttgctactgaaccagcctttct 264 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 162 atgattgttggcgaaatagctaattttgctgcttatgcatttgctcctgctat 214 ||||||||||| ||| ||||||| ||||| || ||||| |||||||||||||| Sbjct: 5 atgattgttggagaagtagctaactttgcagcatatgcctttgctcctgctat 57
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 35 cttcatcggtgccagcttcatcgtcaagaagatggggctca 75 ||||||||| |||||||||||||||||||||| |||||||| Sbjct: 38293725 cttcatcggcgccagcttcatcgtcaagaagaaggggctca 38293765 Score = 61.9 bits (31), Expect = 2e-06 Identities = 109/135 (80%) Strand = Plus / Plus Query: 280 aggagaaactgcacacctttggtatacttggttgtgttctttgtgtagtcggatcgatca 339 ||||||| || |||| |||||||||||||||||||| || ||||| || || || | | Sbjct: 38294825 aggagaagcttcacatatttggtatacttggttgtgtcctctgtgttgtgggttcaacaa 38294884 Query: 340 caattgcactccatgctccacaggagcgtgatattgattctgtaagggaagtttgggatc 399 | |||| || ||||| || ||||||||||| |||||||||||| ||||| |||| || Sbjct: 38294885 ccattgtgcttcatgcgccgcaggagcgtgaaattgattctgtagctgaagtgtgggctc 38294944 Query: 400 ttgcaactgagccag 414 |||| ||||| |||| Sbjct: 38294945 ttgctactgaaccag 38294959 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 32 cgccttcatcggtgccagcttcatcgtcaagaagatggggctc 74 |||||||||||| | |||||||||||||||||||| ||||||| Sbjct: 37881156 cgccttcatcggggtcagcttcatcgtcaagaagaaggggctc 37881198 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 163 tgattgttggcgaaatagctaattttgctgcttatgcatttgctcctgctat 214 |||||||||| ||| ||||||| ||||| || ||||| |||||||||||||| Sbjct: 38294609 tgattgttggagaagtagctaactttgcagcatatgcctttgctcctgctat 38294660
>dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065E10 Length = 183580 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 35 cttcatcggtgccagcttcatcgtcaagaagatggggctca 75 ||||||||| |||||||||||||||||||||| |||||||| Sbjct: 54550 cttcatcggcgccagcttcatcgtcaagaagaaggggctca 54590 Score = 61.9 bits (31), Expect = 2e-06 Identities = 109/135 (80%) Strand = Plus / Plus Query: 280 aggagaaactgcacacctttggtatacttggttgtgttctttgtgtagtcggatcgatca 339 ||||||| || |||| |||||||||||||||||||| || ||||| || || || | | Sbjct: 55650 aggagaagcttcacatatttggtatacttggttgtgtcctctgtgttgtgggttcaacaa 55709 Query: 340 caattgcactccatgctccacaggagcgtgatattgattctgtaagggaagtttgggatc 399 | |||| || ||||| || ||||||||||| |||||||||||| ||||| |||| || Sbjct: 55710 ccattgtgcttcatgcgccgcaggagcgtgaaattgattctgtagctgaagtgtgggctc 55769 Query: 400 ttgcaactgagccag 414 |||| ||||| |||| Sbjct: 55770 ttgctactgaaccag 55784 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 163 tgattgttggcgaaatagctaattttgctgcttatgcatttgctcctgctat 214 |||||||||| ||| ||||||| ||||| || ||||| |||||||||||||| Sbjct: 55434 tgattgttggagaagtagctaactttgcagcatatgcctttgctcctgctat 55485
>ref|XM_463503.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 969 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 32 cgccttcatcggtgccagcttcatcgtcaagaagatggggctc 74 |||||||||||| | |||||||||||||||||||| ||||||| Sbjct: 207 cgccttcatcggggtcagcttcatcgtcaagaagaaggggctc 249
>gb|AC109595.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_B02, complete sequence Length = 125650 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 163 tgattgttggcgaaatagctaattttgctgcttatgcatttgctcctgctattcttgtca 222 |||||||||| ||||| || || || || |||||||| |||||||||||||| | |||| Sbjct: 87407 tgattgttggagaaatcgccaacttcgcagcttatgcttttgctcctgctatcttggtca 87348 Query: 223 ctcctcttggagcactcagtataataatcag 253 |||| ||||| ||||| || ||||| ||||| Sbjct: 87347 ctccacttggtgcacttagcataattatcag 87317 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 35 cttcatcggtgccagcttcatcgtcaagaagatggggctca 75 ||||||||| |||||||||||||||||||||| ||| |||| Sbjct: 88398 cttcatcggcgccagcttcatcgtcaagaagaagggcctca 88358 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 498 atcatggtgtacattggagtctgttctct 526 ||||||||||| ||||| ||||||||||| Sbjct: 86843 atcatggtgtatattggtgtctgttctct 86815
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 163 tgattgttggcgaaatagctaattttgctgcttatgcatttgctcctgctattcttgtca 222 |||||||||| ||||| || || || || |||||||| |||||||||||||| | |||| Sbjct: 20665367 tgattgttggagaaatcgccaacttcgcagcttatgcttttgctcctgctatcttggtca 20665308 Query: 223 ctcctcttggagcactcagtataataatcag 253 |||| ||||| ||||| || ||||| ||||| Sbjct: 20665307 ctccacttggtgcacttagcataattatcag 20665277 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 35 cttcatcggtgccagcttcatcgtcaagaagatggggctca 75 ||||||||| |||||||||||||||||||||| ||| |||| Sbjct: 20666358 cttcatcggcgccagcttcatcgtcaagaagaagggcctca 20666318 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 30 agcgccttcatcggtgccagcttcatcgtcaagaaga 66 |||| ||||||||| |||||||||||| ||||||||| Sbjct: 25258607 agcggcttcatcggcgccagcttcatcatcaagaaga 25258643 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Plus Query: 214 ttcttgtcactcctcttggagcactcagtataat 247 ||||||| ||||||||||||||||| || ||||| Sbjct: 25258974 ttcttgttactcctcttggagcactgagcataat 25259007 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 498 atcatggtgtacattggagtctgttctct 526 ||||||||||| ||||| ||||||||||| Sbjct: 20664803 atcatggtgtatattggtgtctgttctct 20664775
>dbj|AP004669.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0491F11 Length = 152274 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 32 cgccttcatcggtgccagcttcatcgtcaagaagatggggctc 74 |||||||||||| | |||||||||||||||||||| ||||||| Sbjct: 102512 cgccttcatcggggtcagcttcatcgtcaagaagaaggggctc 102554
>dbj|AK103484.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130L04, full insert sequence Length = 1683 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 32 cgccttcatcggtgccagcttcatcgtcaagaagatggggctc 74 |||||||||||| | |||||||||||||||||||| ||||||| Sbjct: 274 cgccttcatcggggtcagcttcatcgtcaagaagaaggggctc 316
>dbj|AP003566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0008G24 Length = 152736 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 32 cgccttcatcggtgccagcttcatcgtcaagaagatggggctc 74 |||||||||||| | |||||||||||||||||||| ||||||| Sbjct: 140404 cgccttcatcggggtcagcttcatcgtcaagaagaaggggctc 140446
>ref|NM_113292.2| Arabidopsis thaliana unknown protein AT3G23870 mRNA, complete cds Length = 1553 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 162 atgattgttggcgaaatagctaattttgctgcttatgcatttgctcctgctatt 215 ||||||||||| ||| ||||||||||||| || ||||||||||| || |||||| Sbjct: 580 atgattgttggggaagtagctaattttgcagcctatgcatttgcaccggctatt 633
>ref|XM_472174.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 954 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 195 tatgcatttgctcctgctattcttgtcactcctcttggagcactcagtataataatcagt 254 ||||||||||||||||| || |||||||||||||| ||||| || || || ||| ||||| Sbjct: 217 tatgcatttgctcctgcaatacttgtcactcctctaggagcgctgagcatcatattcagt 276 Query: 255 gc 256 || Sbjct: 277 gc 278
>emb|BX824470.1|CNS0A5GW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH50ZD04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1549 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 162 atgattgttggcgaaatagctaattttgctgcttatgcatttgctcctgctatt 215 ||||||||||| ||| ||||||||||||| || ||||||||||| || |||||| Sbjct: 581 atgattgttggggaagtagctaattttgcagcctatgcatttgcaccggctatt 634
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 195 tatgcatttgctcctgctattcttgtcactcctcttggagc 235 ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 18201402 tatgcatttgctcctgcaatacttgtcactcctctaggagc 18201442
>dbj|AP001297.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:F14O13 Length = 106203 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 163 tgattgttggcgaaatagctaattttgctgcttatgcatttgctcctgctatt 215 |||||||||| ||| ||||||||||||| || ||||||||||| || |||||| Sbjct: 23358 tgattgttggggaagtagctaattttgcagcctatgcatttgcaccggctatt 23410
>emb|AL662979.3|OSJN00179 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0069D17, complete sequence Length = 147111 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 195 tatgcatttgctcctgctattcttgtcactcctcttggagc 235 ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 37076 tatgcatttgctcctgcaatacttgtcactcctctaggagc 37116
>ref|NM_117454.1| Arabidopsis thaliana unknown protein AT4G13800 mRNA, complete cds Length = 1553 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 162 atgattgttggcgaaatagctaattttgctgcttatgcatttgctcctgctattct 217 ||||||||||| || ||||| |||||||| || ||||||||||| || |||||||| Sbjct: 468 atgattgttggggagatagccaattttgcagcatatgcatttgcaccggctattct 523 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Plus Query: 297 tttggtatacttggttgtgttctttgtgtagtcggatc 334 |||||||||||||||||||| || ||||| || ||||| Sbjct: 603 tttggtatacttggttgtgtcctctgtgttgttggatc 640
>emb|BX826884.1|CNS0A47L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB72ZC04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1287 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 162 atgattgttggcgaaatagctaattttgctgcttatgcatttgctcctgctattct 217 ||||||||||| || ||||| |||||||| || ||||||||||| || |||||||| Sbjct: 237 atgattgttggggagatagccaattttgcagcatatgcatttgcaccggctattct 292 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Plus Query: 297 tttggtatacttggttgtgttctttgtgtagtcggatc 334 |||||||||||||||||||| || ||||| || ||||| Sbjct: 372 tttggtatacttggttgtgtcctctgtgttgttggatc 409
>gb|AY088039.1| Arabidopsis thaliana clone 40589 mRNA, complete sequence Length = 1555 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 162 atgattgttggcgaaatagctaattttgctgcttatgcatttgctcctgctattct 217 ||||||||||| || ||||| |||||||| || ||||||||||| || |||||||| Sbjct: 470 atgattgttggggagatagccaattttgcagcatatgcatttgcaccggctattct 525 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Plus Query: 297 tttggtatacttggttgtgttctttgtgtagtcggatc 334 |||||||||||||||||||| || ||||| || ||||| Sbjct: 605 tttggtatacttggttgtgtcctctgtgttgttggatc 642
>ref|NM_120033.3| Arabidopsis thaliana unknown protein AT4G38730 mRNA, complete cds Length = 1403 Score = 54.0 bits (27), Expect = 6e-04 Identities = 102/127 (80%) Strand = Plus / Plus Query: 132 gagccactttggtggataggcatgatttctatgattgttggcgaaatagctaattttgct 191 ||||||||||||||| ||||| || | | |||| | |||| ||||| ||||| |||| Sbjct: 380 gagccactttggtgggtaggcttggtaacaatgacttttggagaaattgctaactttgtg 439 Query: 192 gcttatgcatttgctcctgctattcttgtcactcctcttggagcactcagtataataatc 251 ||||| | | ||| |||||| | || |||||||||||||| ||| | |||||||| ||| Sbjct: 440 gcttacgtttatgcacctgctgtactagtcactcctcttggcgcattaagtataatcatc 499 Query: 252 agtgctg 258 ||||||| Sbjct: 500 agtgctg 506 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 21 gtgtcgtcgagcgccttcatcggtgccagcttcat 55 ||||||||||||| |||||| ||| |||||||||| Sbjct: 269 gtgtcgtcgagcgtcttcataggttccagcttcat 303
>emb|AL161537.2|ATCHRIV37 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 37 Length = 199667 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 163 tgattgttggcgaaatagctaattttgctgcttatgcatttgctcctgctattct 217 |||||||||| || ||||| |||||||| || ||||||||||| || |||||||| Sbjct: 95471 tgattgttggggagatagccaattttgcagcatatgcatttgcaccggctattct 95417 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Minus Query: 297 tttggtatacttggttgtgttctttgtgtagtcggatc 334 |||||||||||||||||||| || ||||| || ||||| Sbjct: 95255 tttggtatacttggttgtgtcctctgtgttgttggatc 95218
>emb|AL035528.2|ATF18A5 Arabidopsis thaliana DNA chromosome 4, BAC clone F18A5 (ESSA project) Length = 118718 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 163 tgattgttggcgaaatagctaattttgctgcttatgcatttgctcctgctattct 217 |||||||||| || ||||| |||||||| || ||||||||||| || |||||||| Sbjct: 74379 tgattgttggggagatagccaattttgcagcatatgcatttgcaccggctattct 74325 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Minus Query: 297 tttggtatacttggttgtgttctttgtgtagtcggatc 334 |||||||||||||||||||| || ||||| || ||||| Sbjct: 74163 tttggtatacttggttgtgtcctctgtgttgttggatc 74126
>emb|BX826765.1|CNS0A3Z0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB61ZD12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1284 Score = 54.0 bits (27), Expect = 6e-04 Identities = 102/127 (80%) Strand = Plus / Plus Query: 132 gagccactttggtggataggcatgatttctatgattgttggcgaaatagctaattttgct 191 ||||||||||||||| ||||| || | | |||| | |||| ||||| ||||| |||| Sbjct: 297 gagccactttggtgggtaggcttggtaacaatgacttttggagaaattgctaactttgtg 356 Query: 192 gcttatgcatttgctcctgctattcttgtcactcctcttggagcactcagtataataatc 251 ||||| | | ||| |||||| | || |||||||||||||| ||| | |||||||| ||| Sbjct: 357 gcttacgtttatgcacctgctgtactagtcactcctcttggcgcattaagtataatcatc 416 Query: 252 agtgctg 258 ||||||| Sbjct: 417 agtgctg 423 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 21 gtgtcgtcgagcgccttcatcggtgccagcttcat 55 ||||||||||||| |||||| ||| |||||||||| Sbjct: 186 gtgtcgtcgagcgtcttcataggttccagcttcat 220
>gb|BT005138.1| Arabidopsis thaliana clone U50278 unknown protein (At4g38730) mRNA, complete cds Length = 1012 Score = 54.0 bits (27), Expect = 6e-04 Identities = 102/127 (80%) Strand = Plus / Plus Query: 132 gagccactttggtggataggcatgatttctatgattgttggcgaaatagctaattttgct 191 ||||||||||||||| ||||| || | | |||| | |||| ||||| ||||| |||| Sbjct: 148 gagccactttggtgggtaggcttggtaacaatgacttttggagaaattgctaactttgtg 207 Query: 192 gcttatgcatttgctcctgctattcttgtcactcctcttggagcactcagtataataatc 251 ||||| | | ||| |||||| | || |||||||||||||| ||| | |||||||| ||| Sbjct: 208 gcttacgtttatgcacctgctgtactagtcactcctcttggcgcattaagtataatcatc 267 Query: 252 agtgctg 258 ||||||| Sbjct: 268 agtgctg 274 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 21 gtgtcgtcgagcgccttcatcggtgccagcttcat 55 ||||||||||||| |||||| ||| |||||||||| Sbjct: 37 gtgtcgtcgagcgtcttcataggttccagcttcat 71
>dbj|AK117425.1| Arabidopsis thaliana At4g38730 mRNA for unknown protein, complete cds, clone: RAFL17-03-G02 Length = 1405 Score = 54.0 bits (27), Expect = 6e-04 Identities = 102/127 (80%) Strand = Plus / Plus Query: 132 gagccactttggtggataggcatgatttctatgattgttggcgaaatagctaattttgct 191 ||||||||||||||| ||||| || | | |||| | |||| ||||| ||||| |||| Sbjct: 380 gagccactttggtgggtaggcttggtaacaatgacttttggagaaattgctaactttgtg 439 Query: 192 gcttatgcatttgctcctgctattcttgtcactcctcttggagcactcagtataataatc 251 ||||| | | ||| |||||| | || |||||||||||||| ||| | |||||||| ||| Sbjct: 440 gcttacgtttatgcacctgctgtactagtcactcctcttggcgcattaagtataatcatc 499 Query: 252 agtgctg 258 ||||||| Sbjct: 500 agtgctg 506 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 21 gtgtcgtcgagcgccttcatcggtgccagcttcat 55 ||||||||||||| |||||| ||| |||||||||| Sbjct: 269 gtgtcgtcgagcgtcttcataggttccagcttcat 303
>emb|AL161515.2|ATCHRIV27 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 27 Length = 197394 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 163 tgattgttggcgaaatagctaattttgctgcttatgcatttgctcctgctattcttgtca 222 ||||||| || ||||| || || |||||||| ||||| ||||| ||||| ||||| || | Sbjct: 107642 tgattgtgggggaaattgcaaactttgctgcgtatgcgtttgcacctgccattctagtta 107583 Query: 223 ctcctcttgg 232 |||||||||| Sbjct: 107582 ctcctcttgg 107573 Score = 40.1 bits (20), Expect = 8.7 Identities = 41/48 (85%) Strand = Plus / Minus Query: 110 tggagggtattcttacttagtggagccactttggtggataggcatgat 157 |||||| ||||||||||| | ||||| || ||||||||||| ||||| Sbjct: 107839 tggaggctattcttacttgcttgagcctctctggtggataggaatgat 107792
>emb|AL161831.1|ATT25P22 Arabidopsis thaliana DNA chromosome 4, BAC clone T25P22 (ESSA project) Length = 97876 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 163 tgattgttggcgaaatagctaattttgctgcttatgcatttgctcctgctattcttgtca 222 ||||||| || ||||| || || |||||||| ||||| ||||| ||||| ||||| || | Sbjct: 60484 tgattgtgggggaaattgcaaactttgctgcgtatgcgtttgcacctgccattctagtta 60425 Query: 223 ctcctcttgg 232 |||||||||| Sbjct: 60424 ctcctcttgg 60415 Score = 40.1 bits (20), Expect = 8.7 Identities = 41/48 (85%) Strand = Plus / Minus Query: 110 tggagggtattcttacttagtggagccactttggtggataggcatgat 157 |||||| ||||||||||| | ||||| || ||||||||||| ||||| Sbjct: 60681 tggaggctattcttacttgcttgagcctctctggtggataggaatgat 60634
>gb|AC130604.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1155G07, complete sequence Length = 146712 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 30 agcgccttcatcggtgccagcttcatcgtcaagaaga 66 |||| ||||||||| |||||||||||| ||||||||| Sbjct: 121448 agcggcttcatcggcgccagcttcatcatcaagaaga 121484 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Plus Query: 214 ttcttgtcactcctcttggagcactcagtataat 247 ||||||| ||||||||||||||||| || ||||| Sbjct: 121815 ttcttgttactcctcttggagcactgagcataat 121848
>ref|XM_475706.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1065 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 30 agcgccttcatcggtgccagcttcatcgtcaagaaga 66 |||| ||||||||| |||||||||||| ||||||||| Sbjct: 76 agcggcttcatcggcgccagcttcatcatcaagaaga 112 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Plus Query: 214 ttcttgtcactcctcttggagcactcagtataat 247 ||||||| ||||||||||||||||| || ||||| Sbjct: 263 ttcttgttactcctcttggagcactgagcataat 296
>gb|AY232247.1| Drosophila yakuba clone yak-ad_CG12292 mRNA sequence Length = 495 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 35 cttcatcggtgccagcttcatcgtcaagaagatggggctca 75 |||||||||| ||||||||||| ||||||||| || ||||| Sbjct: 165 cttcatcggttccagcttcatcatcaagaagaaggcgctca 205
>dbj|AK121638.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052K11, full insert sequence Length = 1916 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 30 agcgccttcatcggtgccagcttcatcgtcaagaaga 66 |||| ||||||||| |||||||||||| ||||||||| Sbjct: 319 agcggcttcatcggcgccagcttcatcatcaagaaga 355 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Plus Query: 214 ttcttgtcactcctcttggagcactcagtataat 247 ||||||| ||||||||||||||||| || ||||| Sbjct: 506 ttcttgttactcctcttggagcactgagcataat 539
>dbj|AK069309.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012B05, full insert sequence Length = 1675 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 30 agcgccttcatcggtgccagcttcatcgtcaagaaga 66 |||| ||||||||| |||||||||||| ||||||||| Sbjct: 273 agcggcttcatcggcgccagcttcatcatcaagaaga 309 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Plus Query: 214 ttcttgtcactcctcttggagcactcagtataat 247 ||||||| ||||||||||||||||| || ||||| Sbjct: 460 ttcttgttactcctcttggagcactgagcataat 493
>ref|XM_465813.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1391 Score = 48.1 bits (24), Expect = 0.036 Identities = 63/76 (82%) Strand = Plus / Plus Query: 160 ctatgattgttggcgaaatagctaattttgctgcttatgcatttgctcctgctattcttg 219 |||||||| | ||||| |||| || ||||| || |||||||||||||| ||| | |||| Sbjct: 386 ctatgattctgggcgaggtagcaaactttgcagcatatgcatttgctcccgctgtacttg 445 Query: 220 tcactcctcttggagc 235 | |||||||| ||||| Sbjct: 446 ttactcctctaggagc 461 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 531 ggatctctcaccgttatgagtgtaaaggc 559 ||||||||||| ||||| ||||||||||| Sbjct: 757 ggatctctcacggttatcagtgtaaaggc 785
>ref|XM_420186.1| PREDICTED: Gallus gallus similar to hypothetical protein (LOC422191), mRNA Length = 1014 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Plus Query: 30 agcgccttcatcggtgccagcttcatcgtcaagaagatggggct 73 |||||||||||||| | |||||||||| | ||||||| |||||| Sbjct: 61 agcgccttcatcgggggcagcttcatcctgaagaagaaggggct 104
>emb|AJ290422.1|FRU290422 Fugu rubripes gra2 gene (partial), agal gene, rl44 gene, btk gene, ddp gene, _hyp1 gene, met-tRS gene and trap230 gene Length = 47001 Score = 48.1 bits (24), Expect = 0.036 Identities = 48/56 (85%) Strand = Plus / Minus Query: 180 gctaattttgctgcttatgcatttgctcctgctattcttgtcactcctcttggagc 235 ||||| |||||||| ||||||||||| ||||| | | | || |||||||||||||| Sbjct: 30152 gctaactttgctgcctatgcatttgcccctgccactttggtgactcctcttggagc 30097
>emb|BX005164.9| Mouse DNA sequence from clone RP23-257P3 on chromosome X, complete sequence Length = 168756 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Plus Query: 181 ctaattttgctgcttatgcatttgctcc 208 ||||||||||||| |||||||||||||| Sbjct: 20427 ctaattttgctgcatatgcatttgctcc 20454
>dbj|AK070515.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055G08, full insert sequence Length = 1391 Score = 48.1 bits (24), Expect = 0.036 Identities = 63/76 (82%) Strand = Plus / Plus Query: 160 ctatgattgttggcgaaatagctaattttgctgcttatgcatttgctcctgctattcttg 219 |||||||| | ||||| |||| || ||||| || |||||||||||||| ||| | |||| Sbjct: 386 ctatgattctgggcgaggtagcaaactttgcagcatatgcatttgctcccgctgtacttg 445 Query: 220 tcactcctcttggagc 235 | |||||||| ||||| Sbjct: 446 ttactcctctaggagc 461 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 531 ggatctctcaccgttatgagtgtaaaggc 559 ||||||||||| ||||| ||||||||||| Sbjct: 757 ggatctctcacggttatcagtgtaaaggc 785
>emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 89 Length = 199789 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 21 gtgtcgtcgagcgccttcatcggtgccagcttcat 55 ||||||||||||| |||||| ||| |||||||||| Sbjct: 191212 gtgtcgtcgagcgtcttcataggttccagcttcat 191178
>emb|AL035656.1|ATT9A14 Arabidopsis thaliana DNA chromosome 4, BAC clone T9A14 (ESSA project) Length = 88164 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 21 gtgtcgtcgagcgccttcatcggtgccagcttcat 55 ||||||||||||| |||||| ||| |||||||||| Sbjct: 28838 gtgtcgtcgagcgtcttcataggttccagcttcat 28804
>ref|XM_625080.1| PREDICTED: Apis mellifera similar to ENSANGP00000015795 (LOC552704), mRNA Length = 1466 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 183 aattttgctgcttatgcatttgc 205 ||||||||||||||||||||||| Sbjct: 450 aattttgctgcttatgcatttgc 472
>gb|BC075570.1| Xenopus tropicalis MGC89537 protein, mRNA (cDNA clone MGC:89537 IMAGE:6993217), complete cds Length = 1972 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 183 aattttgctgcttatgcatttgc 205 ||||||||||||||||||||||| Sbjct: 393 aattttgctgcttatgcatttgc 415
>ref|NM_001004993.1| Xenopus tropicalis MGC89537 protein (MGC89537), mRNA Length = 1972 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 183 aattttgctgcttatgcatttgc 205 ||||||||||||||||||||||| Sbjct: 393 aattttgctgcttatgcatttgc 415
>gb|AC069327.7|AC069327 Genomic Sequence For Arabidopsis thaliana Clone T26G08 From Chromosome IV, complete sequence Length = 94770 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 21 gtgtcgtcgagcgccttcatcggtgccagcttcat 55 ||||||||||||| |||||| ||| |||||||||| Sbjct: 52066 gtgtcgtcgagcgtcttcataggttccagcttcat 52100
>emb|CR761330.2| Xenopus tropicalis finished cDNA, clone TEgg120n23 Length = 1948 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 183 aattttgctgcttatgcatttgc 205 ||||||||||||||||||||||| Sbjct: 374 aattttgctgcttatgcatttgc 396
>gb|BC038499.1| Mus musculus non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human), mRNA (cDNA clone MGC:46749 IMAGE:4482150), complete cds Length = 1954 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 183 aattttgctgcttatgcatttgctcc 208 ||||||||||| |||||||||||||| Sbjct: 664 aattttgctgcatatgcatttgctcc 689
>gb|AC102121.7| Mus musculus chromosome 7, clone RP23-181P23, complete sequence Length = 193341 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 183 aattttgctgcttatgcatttgctcc 208 ||||||||||| |||||||||||||| Sbjct: 32349 aattttgctgcatatgcatttgctcc 32324
>gb|AC144633.3| Mus musculus BAC clone RP23-26J4 from chromosome 7, complete sequence Length = 223362 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 183 aattttgctgcttatgcatttgctcc 208 ||||||||||| |||||||||||||| Sbjct: 10127 aattttgctgcatatgcatttgctcc 10152
>dbj|AK154755.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630105N12 product:hypothetical protein, full insert sequence Length = 3174 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 183 aattttgctgcttatgcatttgctcc 208 ||||||||||| |||||||||||||| Sbjct: 680 aattttgctgcatatgcatttgctcc 705
>dbj|AK012859.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810035J02 product:hypothetical Integral membrane protein, DUF6 containing protein, full insert sequence Length = 1070 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 183 aattttgctgcttatgcatttgctcc 208 ||||||||||| |||||||||||||| Sbjct: 660 aattttgctgcatatgcatttgctcc 685
>dbj|AK028734.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732448K24 product:hypothetical Integral membrane protein, DUF6 containing protein, full insert sequence Length = 3626 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 183 aattttgctgcttatgcatttgctcc 208 ||||||||||| |||||||||||||| Sbjct: 1434 aattttgctgcatatgcatttgctcc 1459
>dbj|AK008106.1| Mus musculus adult male small intestine cDNA, RIKEN full-length enriched library, clone:2010004N17 product:hypothetical protein, full insert sequence Length = 1914 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 183 aattttgctgcttatgcatttgctcc 208 ||||||||||| |||||||||||||| Sbjct: 709 aattttgctgcatatgcatttgctcc 734
>dbj|AK076051.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700024D06 product:hypothetical Integral membrane protein, DUF6 containing protein, full insert sequence Length = 1851 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 183 aattttgctgcttatgcatttgctcc 208 ||||||||||| |||||||||||||| Sbjct: 679 aattttgctgcatatgcatttgctcc 704
>dbj|AK076184.1| Mus musculus 18 days pregnant adult female placenta and extra embryonic tissue cDNA, RIKEN full-length enriched library, clone:3830408P04 product:hypothetical protein, full insert sequence Length = 1935 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 183 aattttgctgcttatgcatttgctcc 208 ||||||||||| |||||||||||||| Sbjct: 663 aattttgctgcatatgcatttgctcc 688
>ref|NM_023647.2| Mus musculus non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human) (Nipa2), mRNA Length = 3626 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 183 aattttgctgcttatgcatttgctcc 208 ||||||||||| |||||||||||||| Sbjct: 1434 aattttgctgcatatgcatttgctcc 1459
>tpg|BK001121.1| TPA: TPA_exp: Mus musculus non-imprinted in Prader-Willi/Angelman syndrome 2 mRNA, complete cds Length = 3196 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 183 aattttgctgcttatgcatttgctcc 208 ||||||||||| |||||||||||||| Sbjct: 659 aattttgctgcatatgcatttgctcc 684
>dbj|AK041427.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630008K21 product:hypothetical Integral membrane protein, DUF6 containing protein, full insert sequence Length = 3216 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 183 aattttgctgcttatgcatttgctcc 208 ||||||||||| |||||||||||||| Sbjct: 723 aattttgctgcatatgcatttgctcc 748
>dbj|AK011248.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2600017P10 product:BRAIN CDNA, CLONE MNCB-2146, SIMILAR TO HUMAN CLONE 23773 MRNA SEQUENCE homolog [Mus musculus], full insert sequence Length = 1757 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 183 aattttgctgcttatgcatttgctcc 208 ||||||||||| |||||||||||||| Sbjct: 546 aattttgctgcatatgcatttgctcc 571
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.56 Identities = 43/50 (86%) Strand = Plus / Plus Query: 186 tttgctgcttatgcatttgctcctgctattcttgtcactcctcttggagc 235 ||||| || |||||||||||||| ||| | ||||| |||||||| ||||| Sbjct: 17636001 tttgcagcatatgcatttgctcccgctgtacttgttactcctctaggagc 17636050
>ref|XM_218718.2| PREDICTED: Rattus norvegicus similar to hypothetical protein MGC5466 (predicted) (LOC308667), mRNA Length = 2011 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 183 aattttgctgcttatgcatttgctcc 208 ||||||||||| |||||||||||||| Sbjct: 737 aattttgctgcatatgcatttgctcc 762
>dbj|AP004086.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1288_D09 Length = 124026 Score = 44.1 bits (22), Expect = 0.56 Identities = 43/50 (86%) Strand = Plus / Plus Query: 186 tttgctgcttatgcatttgctcctgctattcttgtcactcctcttggagc 235 ||||| || |||||||||||||| ||| | ||||| |||||||| ||||| Sbjct: 105919 tttgcagcatatgcatttgctcccgctgtacttgttactcctctaggagc 105968
>dbj|AB041581.1| Mus musculus brain cDNA, clone MNCb-2146, similar to Human clone 23773 mRNA sequence Length = 1902 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 183 aattttgctgcttatgcatttgctcc 208 ||||||||||| |||||||||||||| Sbjct: 659 aattttgctgcatatgcatttgctcc 684
>ref|NM_127682.3| Arabidopsis thaliana unknown protein AT2G21120 mRNA, complete cds Length = 1689 Score = 42.1 bits (21), Expect = 2.2 Identities = 54/65 (83%) Strand = Plus / Plus Query: 108 tatggagggtattcttacttagtggagccactttggtggataggcatgatttctatgatt 167 |||||||| ||| |||| ||| | ||||| ||||||||| ||| ||| || |||||||| Sbjct: 471 tatggaggctatacttatttattagagccgctttggtgggcagggatggttactatgatt 530 Query: 168 gttgg 172 ||||| Sbjct: 531 gttgg 535
>ref|XM_526773.1| PREDICTED: Pan troglodytes hypothetical protein XP_526773 (LOC471391), mRNA Length = 924 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 183 aattttgctgcttatgcatttgctcctgc 211 ||||||||||||||||| ||||| ||||| Sbjct: 82 aattttgctgcttatgcttttgcacctgc 110
>gb|BC077186.1| Xenopus laevis MGC78848 protein, mRNA (cDNA clone MGC:78848 IMAGE:3402930), complete cds Length = 2085 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 183 aattttgctgcttatgcatttgctcctgc 211 ||||||||||||||||| ||||| ||||| Sbjct: 388 aattttgctgcttatgcgtttgcacctgc 416
>gb|AC093439.2| Drosophila melanogaster clone BACR28A12, complete sequence Length = 186444 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 35 cttcatcggtgccagcttcatcgtcaagaagatggggctca 75 |||||||||| ||||||||||| |||| |||| || ||||| Sbjct: 172788 cttcatcggttccagcttcatcatcaaaaagaaggcgctca 172828
>ref|NM_207330.1| Homo sapiens NIPA-like domain containing 1 (NPAL1), mRNA Length = 2204 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 183 aattttgctgcttatgcatttgctcctgc 211 ||||||||||||||||| ||||| ||||| Sbjct: 457 aattttgctgcttatgcttttgcacctgc 485
>gb|BC067881.1| Homo sapiens NIPA-like domain containing 1, mRNA (cDNA clone MGC:87584 IMAGE:30345943), complete cds Length = 2204 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 183 aattttgctgcttatgcatttgctcctgc 211 ||||||||||||||||| ||||| ||||| Sbjct: 457 aattttgctgcttatgcttttgcacctgc 485
>emb|CR857996.1| Pongo pygmaeus mRNA; cDNA DKFZp469A1913 (from clone DKFZp469A1913) Length = 5277 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 183 aattttgctgcttatgcatttgctcctgc 211 ||||||||||||||||| ||||| ||||| Sbjct: 463 aattttgctgcttatgcttttgcacctgc 491
>emb|CR749484.1| Homo sapiens mRNA; cDNA DKFZp686A06115 (from clone DKFZp686A06115) Length = 5361 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 183 aattttgctgcttatgcatttgctcctgc 211 ||||||||||||||||| ||||| ||||| Sbjct: 458 aattttgctgcttatgcttttgcacctgc 486
>dbj|AK095299.1| Homo sapiens cDNA FLJ37980 fis, clone CTONG2010508 Length = 3019 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 183 aattttgctgcttatgcatttgctcctgc 211 ||||||||||||||||| ||||| ||||| Sbjct: 418 aattttgctgcttatgcttttgcacctgc 446
>ref|NM_135742.2| Drosophila melanogaster CG12292-RA (CG12292), mRNA Length = 1463 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 35 cttcatcggtgccagcttcatcgtcaagaagatggggctca 75 |||||||||| ||||||||||| |||| |||| || ||||| Sbjct: 240 cttcatcggttccagcttcatcatcaaaaagaaggcgctca 280
>gb|AC096749.2| Homo sapiens BAC clone RP11-415L23 from 4, complete sequence Length = 112187 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 183 aattttgctgcttatgcatttgctcctgc 211 ||||||||||||||||| ||||| ||||| Sbjct: 52005 aattttgctgcttatgcttttgcacctgc 52033
>ref|XM_686856.1| PREDICTED: Danio rerio hypothetical protein LOC553226 (LOC553226), mRNA Length = 3439 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 509 cattggagtctgttctcttct 529 ||||||||||||||||||||| Sbjct: 2309 cattggagtctgttctcttct 2289
>gb|AC161820.5| Pan troglodytes BAC clone CH251-502M7 from chromosome unknown, complete sequence Length = 169869 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 183 aattttgctgcttatgcatttgctcctgc 211 ||||||||||||||||| ||||| ||||| Sbjct: 42685 aattttgctgcttatgcttttgcacctgc 42657
>gb|AC093095.1| Drosophila melanogaster, chromosome 2L, region 33F-34A, BAC clone BACR17H02, complete sequence Length = 167544 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 35 cttcatcggtgccagcttcatcgtcaagaagatggggctca 75 |||||||||| ||||||||||| |||| |||| || ||||| Sbjct: 2780 cttcatcggttccagcttcatcatcaaaaagaaggcgctca 2820
>emb|BX820798.1|CNS0A80Z Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH70ZA01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1662 Score = 42.1 bits (21), Expect = 2.2 Identities = 54/65 (83%) Strand = Plus / Plus Query: 108 tatggagggtattcttacttagtggagccactttggtggataggcatgatttctatgatt 167 |||||||| ||| |||| ||| | ||||| ||||||||| ||| ||| || |||||||| Sbjct: 471 tatggaggctatacttatttattagagccgctttggtgggcagggatggttactatgatt 530 Query: 168 gttgg 172 ||||| Sbjct: 531 gttgg 535
>gb|AC010346.6|AC010346 Homo sapiens chromosome 5 clone CITB-H1_2018B2, complete sequence Length = 109626 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 405 actgagccagcttttctttca 425 ||||||||||||||||||||| Sbjct: 66270 actgagccagcttttctttca 66290
>dbj|AK118581.1| Arabidopsis thaliana At2g21120 mRNA for unknown protein, complete cds, clone: RAFL19-82-C13 Length = 1487 Score = 42.1 bits (21), Expect = 2.2 Identities = 54/65 (83%) Strand = Plus / Plus Query: 108 tatggagggtattcttacttagtggagccactttggtggataggcatgatttctatgatt 167 |||||||| ||| |||| ||| | ||||| ||||||||| ||| ||| || |||||||| Sbjct: 269 tatggaggctatacttatttattagagccgctttggtgggcagggatggttactatgatt 328 Query: 168 gttgg 172 ||||| Sbjct: 329 gttgg 333
>gb|AE003637.3| Drosophila melanogaster chromosome 2L, section 46 of 83 of the complete sequence Length = 222787 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 35 cttcatcggtgccagcttcatcgtcaagaagatggggctca 75 |||||||||| ||||||||||| |||| |||| || ||||| Sbjct: 61217 cttcatcggttccagcttcatcatcaaaaagaaggcgctca 61257
>gb|AC005891.1|AC005891 Drosophila melanogaster, chromosome 2L, region 33F3-34A2, P1 clones DS08479 and DS07153, complete sequence Length = 136933 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 35 cttcatcggtgccagcttcatcgtcaagaagatggggctca 75 |||||||||| ||||||||||| |||| |||| || ||||| Sbjct: 21191 cttcatcggttccagcttcatcatcaaaaagaaggcgctca 21231
>dbj|AP006730.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT45B09, TM0885b, complete sequence Length = 44466 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 543 gttatgagtgtaaaggctctcggaattgc 571 ||||||||||| |||||||| |||||||| Sbjct: 18766 gttatgagtgttaaggctcttggaattgc 18738 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 35 cttcatcggtgccagcttcatcgtcaagaaga 66 ||||||||| ||||||||||| ||||| |||| Sbjct: 20934 cttcatcggcgccagcttcattgtcaaaaaga 20903
>gb|AC170813.3| Rhesus Macaque BAC CH250-421G6 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 165221 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 183 aattttgctgcttatgcatttgctcctgc 211 ||||||||||||||||| ||||| ||||| Sbjct: 115326 aattttgctgcttatgcttttgcacctgc 115354
>gb|AY559408.1| Rice gall dwarf virus segment 3 major core capsid protein mRNA, complete cds Length = 3224 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 ccttgttccttatatatttt 470 |||||||||||||||||||| Sbjct: 2701 ccttgttccttatatatttt 2682
>gb|AC006804.3| Caenorhabditis elegans cosmid Y53G8B, complete sequence Length = 31636 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 182 taattttgctgcttatgcatttgc 205 ||||||||| |||||||||||||| Sbjct: 15456 taattttgcggcttatgcatttgc 15433
>ref|XM_644064.1| Entamoeba histolytica HM-1:IMSS protein kinase (338.t00004) partial mRNA Length = 2220 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ttggtatacttggttgtgtt 317 |||||||||||||||||||| Sbjct: 154 ttggtatacttggttgtgtt 135
>ref|XM_644204.1| Entamoeba histolytica HM-1:IMSS protein kinase (321.t00011) partial mRNA Length = 1761 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ttggtatacttggttgtgtt 317 |||||||||||||||||||| Sbjct: 154 ttggtatacttggttgtgtt 135
>ref|XM_646440.1| Entamoeba histolytica HM-1:IMSS protein kinase (160.t00010) partial mRNA Length = 2208 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ttggtatacttggttgtgtt 317 |||||||||||||||||||| Sbjct: 196 ttggtatacttggttgtgtt 177
>gb|AC161824.6| Mus musculus 6 BAC RP23-62E9 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 263206 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 511 ttggagtctgttctcttcta 530 |||||||||||||||||||| Sbjct: 123600 ttggagtctgttctcttcta 123619
>emb|AL365187.19| Human DNA sequence from clone RP11-342F23 on chromosome 1 Contains the 5' end of the gene for metalloprotease related protein 1 (MPRP-1) and a CpG island, complete sequence Length = 49963 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 agtgctgcacttgctcattc 271 |||||||||||||||||||| Sbjct: 43481 agtgctgcacttgctcattc 43462
>emb|AL035252.5|HS738P15 Human DNA sequence from clone RP4-738P15 on chromosome 20p11.2-11.22 Contains a novel gene (LOC284798), a novel pseudogene, the ENTPD6 gene for ectonucleoside triphosphate diphosphohydrolase 6 (putative function) and two CpG islands, complete sequence Length = 108487 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 184 attttgctgcttatgcatttgctcctgc 211 |||||||||||||||| ||||| ||||| Sbjct: 39682 attttgctgcttatgcttttgcacctgc 39655
>emb|BX842648.2| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 3/11 Length = 346416 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 tgcaactgagccagcttttc 420 |||||||||||||||||||| Sbjct: 290212 tgcaactgagccagcttttc 290193
>dbj|AB063145.1| Coturnix japonica DNA, microsatellite locus GUJ0077 Length = 230 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 gtagtagtggtggcagcctt 454 |||||||||||||||||||| Sbjct: 151 gtagtagtggtggcagcctt 132
>gb|AC123904.5| Homo sapiens 12 BAC RP11-361A23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 125400 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 260 acttgctcattccattctacagga 283 |||||||||||||||||| ||||| Sbjct: 56521 acttgctcattccattcttcagga 56498
>gb|AC091203.3| Drosophila melanogaster 3L BAC RP98-48N8 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 176929 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 tcacaattgcactccatgct 356 |||||||||||||||||||| Sbjct: 31282 tcacaattgcactccatgct 31301
>gb|AC010022.8| Drosophila melanogaster 3L BAC RP98-1E12 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 165852 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 tcacaattgcactccatgct 356 |||||||||||||||||||| Sbjct: 114762 tcacaattgcactccatgct 114781
>gb|AY089521.1| Drosophila melanogaster GM13388 full insert cDNA Length = 1461 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 35 cttcatcggtgccagcttcatcgtcaagaaga 66 |||||||||| ||||||||||| |||| |||| Sbjct: 218 cttcatcggttccagcttcatcatcaaaaaga 249
>gb|AC160760.4| Mus musculus BAC clone RP23-449G13 from chromosome 17, complete sequence Length = 174449 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 452 cttgttccttatatattttg 471 |||||||||||||||||||| Sbjct: 98347 cttgttccttatatattttg 98366
>ref|NM_065260.2| Caenorhabditis elegans Y53G8B.4 (Y53G8B.4) mRNA, complete cds Length = 1237 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 182 taattttgctgcttatgcatttgc 205 ||||||||| |||||||||||||| Sbjct: 378 taattttgcggcttatgcatttgc 401
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 tcatcgtcaagaagatgggg 71 |||||||||||||||||||| Sbjct: 800937 tcatcgtcaagaagatgggg 800956
>emb|BX821048.1|CNS0A9J4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH95ZA12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1585 Score = 40.1 bits (20), Expect = 8.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 219 gtcactcctcttggagcactcagtataataatcagtgctg 258 ||||||||||| || ||| | |||||||| |||||||||| Sbjct: 574 gtcactcctctgggtgcattaagtataatcatcagtgctg 613
>gb|AC153598.4| Mus musculus 6 BAC RP23-167L15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 209035 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 511 ttggagtctgttctcttcta 530 |||||||||||||||||||| Sbjct: 201202 ttggagtctgttctcttcta 201183
>gb|AC151289.3| Mus musculus BAC clone RP23-364K1 from chromosome 17, complete sequence Length = 172662 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 452 cttgttccttatatattttg 471 |||||||||||||||||||| Sbjct: 147890 cttgttccttatatattttg 147871
>emb|BX004870.13| Zebrafish DNA sequence from clone CH211-168H9 in linkage group 5, complete sequence Length = 153127 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 ttgttccttatatattttgt 472 |||||||||||||||||||| Sbjct: 27923 ttgttccttatatattttgt 27904
>dbj|AB011480.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPI7 Length = 40548 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 592 gagtgaaccaattattttat 611 |||||||||||||||||||| Sbjct: 14271 gagtgaaccaattattttat 14252
>gb|AE003552.4| Drosophila melanogaster chromosome 3L, section 33 of 83 of the complete sequence Length = 286770 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 tcacaattgcactccatgct 356 |||||||||||||||||||| Sbjct: 30647 tcacaattgcactccatgct 30666
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 tcatcgtcaagaagatgggg 71 |||||||||||||||||||| Sbjct: 800937 tcatcgtcaagaagatgggg 800956
>emb|BX000500.4|CNS08CDQ Oryza sativa chromosome 12, . BAC OSJNBb0027B07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 79383 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 tcatcgtcaagaagatgggg 71 |||||||||||||||||||| Sbjct: 66987 tcatcgtcaagaagatgggg 66968
>emb|CT027991.8| Mouse DNA sequence from clone RP23-418N2 on chromosome 16, complete sequence Length = 186296 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 510 attggagtctgttctcttct 529 |||||||||||||||||||| Sbjct: 138863 attggagtctgttctcttct 138844 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,024,442 Number of Sequences: 3902068 Number of extensions: 7024442 Number of successful extensions: 115233 Number of sequences better than 10.0: 134 Number of HSP's better than 10.0 without gapping: 135 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 114637 Number of HSP's gapped (non-prelim): 587 length of query: 638 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 615 effective length of database: 17,143,297,704 effective search space: 10543128087960 effective search space used: 10543128087960 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
