ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags33b13 |
|---|---|
| Clone Library Name | barley_pub |
>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D| (AtCDC48d) (Transitional endoplasmic reticulum ATPase D) Length = 815 Score = 289 bits (740), Expect = 3e-78 Identities = 144/160 (90%), Positives = 144/160 (90%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL Sbjct: 493 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 552 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 TMWFGESEANVREIFDKAR SAPCVLFFDELDSIATQ LNQLLTEM Sbjct: 553 TMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEM 612 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP Sbjct: 613 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 652 Score = 150 bits (378), Expect = 3e-36 Identities = 74/160 (46%), Positives = 108/160 (67%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V+ P+ HP+ F+ G+ P KG+L YGPPG GKTL+A+A+ANE A F I GPE++ Sbjct: 220 IRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIM 279 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GESE+N+R+ F++A +AP ++F DE+DSIA + ++QLLT M Sbjct: 280 SKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPK---REKTHGEVERRIVSQLLTLM 336 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG+ ++ V ++GATNRP+ IDPAL R GR D+ I I +P Sbjct: 337 DGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVP 376
>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing| protein homolog) (VCP) Length = 807 Score = 287 bits (735), Expect = 1e-77 Identities = 142/160 (88%), Positives = 144/160 (90%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELL Sbjct: 493 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 552 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 TMWFGESEANVREIFDKAR SAPCVLFFDELDSIATQ LNQLLTEM Sbjct: 553 TMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEM 612 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DGM+AKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP Sbjct: 613 DGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 652 Score = 151 bits (381), Expect = 1e-36 Identities = 75/160 (46%), Positives = 108/160 (67%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V+ P+ HP+ F+ G+ P KG+L YGPPG GKTL+A+A+ANE A F I GPE++ Sbjct: 220 IRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIM 279 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GESE+N+R+ F++A +AP ++F DE+DSIA + ++QLLT M Sbjct: 280 SKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPK---REKTHGEVERRIVSQLLTLM 336 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG+ ++ V +IGATNRP+ IDPAL R GR D+ I I +P Sbjct: 337 DGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVP 376
>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)| (Transitional endoplasmic reticulum ATPase E) Length = 810 Score = 286 bits (732), Expect = 2e-77 Identities = 142/160 (88%), Positives = 143/160 (89%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELL Sbjct: 492 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 551 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 TMWFGESEANVREIFDKAR SAPCVLFFDELDSIATQ LNQLLTEM Sbjct: 552 TMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEM 611 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DGMNAKKTVFIIGATNRPDIID ALLRPGRLDQLIYIPLP Sbjct: 612 DGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLP 651 Score = 150 bits (378), Expect = 3e-36 Identities = 74/160 (46%), Positives = 108/160 (67%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V+ P+ HP+ F+ G+ P KG+L YGPPG GKTL+A+A+ANE A F I GPE++ Sbjct: 219 IRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIM 278 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GESE+N+R+ F++A +AP ++F DE+DSIA + ++QLLT M Sbjct: 279 SKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPK---REKTNGEVERRIVSQLLTLM 335 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG+ ++ V ++GATNRP+ IDPAL R GR D+ I I +P Sbjct: 336 DGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVP 375
>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog| Length = 805 Score = 286 bits (731), Expect = 3e-77 Identities = 142/160 (88%), Positives = 143/160 (89%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 LQETVQYPVE PEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELL Sbjct: 493 LQETVQYPVEPPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 552 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 TMWFGESEANVREIFDKAR SAPCVLFFDELDSIATQ LNQLLTEM Sbjct: 553 TMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSSGDAGGAADRVLNQLLTEM 612 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP Sbjct: 613 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 652 Score = 150 bits (378), Expect = 3e-36 Identities = 74/160 (46%), Positives = 108/160 (67%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V+ P+ HP+ F+ G+ P KG+L YGPPG GKTL+A+A+ANE A F I GPE++ Sbjct: 220 IRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIM 279 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GESE+N+R+ F++A +AP ++F DE+DSIA + ++QLLT M Sbjct: 280 SKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPK---REKTHGEVERRIVSQLLTLM 336 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG+ ++ V ++GATNRP+ IDPAL R GR D+ I I +P Sbjct: 337 DGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVP 376
>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)| Length = 809 Score = 281 bits (718), Expect = 9e-76 Identities = 142/161 (88%), Positives = 143/161 (88%), Gaps = 1/161 (0%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELL Sbjct: 492 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 551 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQ-XXXXXXXXXXXXXXXLNQLLTE 386 TMWFGESEANVREIFDKAR SAPCVLFFDELDSIATQ LNQLLTE Sbjct: 552 TMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTE 611 Query: 387 MDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 MDGMNAKKTVFIIGATNRPDIID ALLRPGRLDQLIYIPLP Sbjct: 612 MDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLP 652 Score = 150 bits (378), Expect = 3e-36 Identities = 74/160 (46%), Positives = 108/160 (67%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V+ P+ HP+ F+ G+ P KG+L YGPPG GKTL+A+A+ANE A F I GPE++ Sbjct: 219 IRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIM 278 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GESE+N+R+ F++A +AP ++F DE+DSIA + ++QLLT M Sbjct: 279 SKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPK---REKTNGEVERRIVSQLLTLM 335 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG+ ++ V ++GATNRP+ IDPAL R GR D+ I I +P Sbjct: 336 DGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVP 375
>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2| (p97/CDC48 homolog 2) Length = 810 Score = 268 bits (686), Expect = 5e-72 Identities = 130/160 (81%), Positives = 138/160 (86%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 LQE VQYPVEHPEK+ KFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL Sbjct: 494 LQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 553 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 TMWFGESEANVR++FDKAR +APCVLFFDELDSIA +NQ+LTEM Sbjct: 554 TMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEM 613 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DGMNAKK VFIIGATNRPDIIDPA+LRPGRLDQLIYIPLP Sbjct: 614 DGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLP 653 Score = 137 bits (346), Expect = 1e-32 Identities = 69/160 (43%), Positives = 103/160 (64%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V+ P+ HP+ F+ G+ P +G+L +GPPG GKTL+A+A+ANE A F I GPE++ Sbjct: 221 IKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIM 280 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GESE+N+R+ F + ++P +LF DE+D+IA + ++QLLT M Sbjct: 281 SKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPK---REKAHGEVEKRIVSQLLTLM 337 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG+ + V +I ATNRP+ ID AL R GR D+ I I +P Sbjct: 338 DGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIP 377
>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 267 bits (683), Expect = 1e-71 Identities = 131/160 (81%), Positives = 138/160 (86%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 LQE VQYPVEHP+KF KFGM+PSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL Sbjct: 488 LQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 547 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 TMWFGESEANVREIFDKAR +APCVLFFDELDSIA +NQ+LTEM Sbjct: 548 TMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEM 607 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DGM+ KK VFIIGATNRPDIIDPA+LRPGRLDQLIYIPLP Sbjct: 608 DGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 647 Score = 144 bits (362), Expect = 2e-34 Identities = 71/160 (44%), Positives = 105/160 (65%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V+ P+ HP F+ G+ P +G+L YGPPG GKTL+A+A+ANE A F I GPE++ Sbjct: 215 IKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM 274 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GESE+N+R+ F++A +AP ++F DELD+IA + ++QLLT M Sbjct: 275 SKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPK---REKTHGEVERRIVSQLLTLM 331 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG+ + V ++ ATNRP+ IDPAL R GR D+ + I +P Sbjct: 332 DGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIP 371
>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 267 bits (683), Expect = 1e-71 Identities = 131/160 (81%), Positives = 138/160 (86%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 LQE VQYPVEHP+KF KFGM+PSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL Sbjct: 488 LQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 547 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 TMWFGESEANVREIFDKAR +APCVLFFDELDSIA +NQ+LTEM Sbjct: 548 TMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEM 607 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DGM+ KK VFIIGATNRPDIIDPA+LRPGRLDQLIYIPLP Sbjct: 608 DGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 647 Score = 144 bits (362), Expect = 2e-34 Identities = 71/160 (44%), Positives = 105/160 (65%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V+ P+ HP F+ G+ P +G+L YGPPG GKTL+A+A+ANE A F I GPE++ Sbjct: 215 IKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM 274 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GESE+N+R+ F++A +AP ++F DELD+IA + ++QLLT M Sbjct: 275 SKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPK---REKTHGEVERRIVSQLLTLM 331 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG+ + V ++ ATNRP+ IDPAL R GR D+ + I +P Sbjct: 332 DGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIP 371
>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 267 bits (683), Expect = 1e-71 Identities = 131/160 (81%), Positives = 138/160 (86%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 LQE VQYPVEHP+KF KFGM+PSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL Sbjct: 488 LQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 547 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 TMWFGESEANVREIFDKAR +APCVLFFDELDSIA +NQ+LTEM Sbjct: 548 TMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEM 607 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DGM+ KK VFIIGATNRPDIIDPA+LRPGRLDQLIYIPLP Sbjct: 608 DGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 647 Score = 144 bits (362), Expect = 2e-34 Identities = 71/160 (44%), Positives = 105/160 (65%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V+ P+ HP F+ G+ P +G+L YGPPG GKTL+A+A+ANE A F I GPE++ Sbjct: 215 IKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM 274 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GESE+N+R+ F++A +AP ++F DELD+IA + ++QLLT M Sbjct: 275 SKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPK---REKTHGEVERRIVSQLLTLM 331 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG+ + V ++ ATNRP+ IDPAL R GR D+ + I +P Sbjct: 332 DGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIP 371
>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) Length = 805 Score = 267 bits (682), Expect = 1e-71 Identities = 131/160 (81%), Positives = 138/160 (86%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 LQE VQYPVEHP+KF KFGM+PSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL Sbjct: 489 LQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 548 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 TMWFGESEANVREIFDKAR +APCVLFFDELDSIA +NQ+LTEM Sbjct: 549 TMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEM 608 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DGM+ KK VFIIGATNRPDIIDPA+LRPGRLDQLIYIPLP Sbjct: 609 DGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 648 Score = 144 bits (362), Expect = 2e-34 Identities = 71/160 (44%), Positives = 105/160 (65%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V+ P+ HP F+ G+ P +G+L YGPPG GKTL+A+A+ANE A F I GPE++ Sbjct: 216 IKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM 275 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GESE+N+R+ F++A +AP ++F DELD+IA + ++QLLT M Sbjct: 276 SKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPK---REKTHGEVERRIVSQLLTLM 332 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG+ + V ++ ATNRP+ IDPAL R GR D+ + I +P Sbjct: 333 DGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIP 372
>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 266 bits (680), Expect = 2e-71 Identities = 130/160 (81%), Positives = 138/160 (86%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 LQ+ VQYPVEHP+KF KFGM+PSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL Sbjct: 488 LQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 547 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 TMWFGESEANVREIFDKAR +APCVLFFDELDSIA +NQ+LTEM Sbjct: 548 TMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEM 607 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DGM+ KK VFIIGATNRPDIIDPA+LRPGRLDQLIYIPLP Sbjct: 608 DGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 647 Score = 144 bits (362), Expect = 2e-34 Identities = 71/160 (44%), Positives = 105/160 (65%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V+ P+ HP F+ G+ P +G+L YGPPG GKTL+A+A+ANE A F I GPE++ Sbjct: 215 IKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM 274 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GESE+N+R+ F++A +AP ++F DELD+IA + ++QLLT M Sbjct: 275 SKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPK---REKTHGEVERRIVSQLLTLM 331 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG+ + V ++ ATNRP+ IDPAL R GR D+ + I +P Sbjct: 332 DGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIP 371
>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1| (p97/CDC48 homolog 1) Length = 809 Score = 265 bits (676), Expect = 7e-71 Identities = 130/161 (80%), Positives = 139/161 (86%), Gaps = 1/161 (0%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 LQE VQYPVEHPEK+ KFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL Sbjct: 495 LQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 554 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIA-TQXXXXXXXXXXXXXXXLNQLLTE 386 TMWFGESEANVR++FDKAR +APCVLFFDELDSIA + +NQ+LTE Sbjct: 555 TMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTE 614 Query: 387 MDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 MDGMNAKK VFIIGATNRPDIIDPA+LRPGRLDQLIYIPLP Sbjct: 615 MDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLP 655 Score = 136 bits (343), Expect = 3e-32 Identities = 67/160 (41%), Positives = 103/160 (64%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V+ P+ HP+ F+ G+ P +G+L +GPPG GKTL+A+A+ANE + F I GPE++ Sbjct: 222 IKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVM 281 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GESE+N+R+ F++ + P +LF DE+D+IA + ++QLLT M Sbjct: 282 SKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPK---REKTNGEVERRIVSQLLTLM 338 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG+ + + +I ATNRP+ ID AL R GR D+ I I +P Sbjct: 339 DGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIP 378
>CDC48_YEAST (P25694) Cell division control protein 48| Length = 835 Score = 238 bits (608), Expect = 5e-63 Identities = 113/160 (70%), Positives = 132/160 (82%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+ETV+YPV HP+++ KFG+SPSKGVLFYGPPG GKTLLAKA+A E ANFIS+KGPELL Sbjct: 499 LKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELL 558 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 +MW+GESE+N+R+IFDKAR +AP V+F DELDSIA +NQLLTEM Sbjct: 559 SMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEM 618 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DGMNAKK VF+IGATNRPD IDPA+LRPGRLDQLIY+PLP Sbjct: 619 DGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLP 658 Score = 150 bits (380), Expect = 1e-36 Identities = 75/160 (46%), Positives = 107/160 (66%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V+ P+ HP+ F+ G+ P +GVL YGPPG GKTL+A+A+ANE A F I GPE++ Sbjct: 226 IREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVM 285 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GESE+N+R+ F++A +AP ++F DE+DSIA + ++QLLT M Sbjct: 286 SKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPK---RDKTNGEVERRVVSQLLTLM 342 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DGM A+ V +I ATNRP+ IDPAL R GR D+ + I +P Sbjct: 343 DGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIP 382
>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48| Length = 815 Score = 236 bits (603), Expect = 2e-62 Identities = 115/160 (71%), Positives = 134/160 (83%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+ETVQ PV + EKF +FG++PSKGVLF+GPPG GKTLLAKAIANEC ANFIS+KGPELL Sbjct: 509 LRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELL 568 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 +MWFGESE+NVR+IFDKAR +APCV+F DELDSIA + +NQLLTEM Sbjct: 569 SMWFGESESNVRDIFDKARAAAPCVVFLDELDSIA-KARGASAGDSGGGDRVVNQLLTEM 627 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG+N+KK VF+IGATNRPD IDPAL+RPGRLDQLIY+PLP Sbjct: 628 DGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLP 667 Score = 148 bits (374), Expect = 7e-36 Identities = 71/160 (44%), Positives = 107/160 (66%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V+ P+ HP+ F+ G+ P +G+L YGPPG GKTL+A+A+ANE A F I GPE++ Sbjct: 236 IRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIM 295 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GESE+N+R+ F++A ++P ++F DE+DSIA + ++QLLT M Sbjct: 296 SKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPK---REKTNGEVERRVVSQLLTLM 352 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DGM A+ V ++ ATNRP+ IDPAL R GR D+ + + +P Sbjct: 353 DGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIP 392
>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase| Length = 1229 Score = 221 bits (564), Expect = 7e-58 Identities = 103/160 (64%), Positives = 129/160 (80%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+ET+ YP+E+ + KF + +KG+L YGPPGCGKTLLAKAIANEC+ANFIS+KGPELL Sbjct: 946 LKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANECKANFISVKGPELL 1005 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 TMWFGESEANVR++FDKAR ++PC++FFDE+DS+A + +NQ+LTE+ Sbjct: 1006 TMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKE--RNSNTNNDASDRVINQILTEI 1063 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG+N KKT+FII ATNRPDI+D AL RPGRLD+LIYI LP Sbjct: 1064 DGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLP 1103 Score = 140 bits (354), Expect = 2e-33 Identities = 73/160 (45%), Positives = 100/160 (62%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E ++ P+++PE F G+S KGVL +G PG GKT +AKAIANE A I GPE++ Sbjct: 539 IRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIANESNAYCYIINGPEIM 598 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GESE +R+IF KA PC++F DE+DSIA + ++QLLT M Sbjct: 599 SKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANK---RSKSNNELEKRVVSQLLTLM 655 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG+ V ++ ATNRP+ IDPAL R GR D+ I IP+P Sbjct: 656 DGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVP 695
>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156| Length = 903 Score = 195 bits (496), Expect = 5e-50 Identities = 95/160 (59%), Positives = 119/160 (74%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+E V++P++ E FEK G+ P KGVL +GPPG GKTLLAKA+ANE ANFIS+KGPE+ Sbjct: 464 LREAVEWPLKAKEVFEKIGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIF 523 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + W GESE +REIF KAR SAPC++FFDE+D+IA + +NQLLTE+ Sbjct: 524 SKWVGESEKAIREIFRKARQSAPCIIFFDEIDAIAPK--RGRDLSSAVTDKVVNQLLTEL 581 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DGM K V +I ATNRPDIIDPALLRPGRLD++I +P+P Sbjct: 582 DGMEEPKDVVVIAATNRPDIIDPALLRPGRLDRVILVPVP 621 Score = 161 bits (407), Expect = 1e-39 Identities = 79/160 (49%), Positives = 109/160 (68%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E ++ P+ HPE FEK G+ P KGVL GPPG GKTLLAKA+ANE ANF I GPE++ Sbjct: 191 VREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAVANEAGANFYVINGPEIM 250 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + + GE+E N+R+IF++A +AP ++F DE+D+IA + + QLLT M Sbjct: 251 SKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPK---RDEATGEVERRLVAQLLTLM 307 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG+ + V +IGATNRP+ +DPAL RPGR D+ I I +P Sbjct: 308 DGLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVP 347
>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7| Length = 837 Score = 188 bits (478), Expect = 6e-48 Identities = 88/160 (55%), Positives = 118/160 (73%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L + P++ PE +EK G+S GVL +GPPGCGKTLLAKA+ANE +ANFISIKGPELL Sbjct: 545 LNMAIVQPIKRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVANESRANFISIKGPELL 604 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GESE ++R++F +AR S PCV+FFDELD++ + +N LLTE+ Sbjct: 605 NKYVGESERSIRQVFTRARASVPCVIFFDELDALVPR---RDTSLSESSSRVVNTLLTEL 661 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG+N ++ +F+IGATNRPD+IDPA+LRPGRLD+ ++I LP Sbjct: 662 DGLNDRRGIFVIGATNRPDMIDPAMLRPGRLDKSLFIELP 701 Score = 141 bits (356), Expect = 9e-34 Identities = 75/164 (45%), Positives = 101/164 (61%), Gaps = 4/164 (2%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L E + P+ HPE F G+ P +GVL +GPPGCGKT +A A+A E Q FISI P ++ Sbjct: 217 LMELIGLPILHPEIFLSTGVEPPRGVLLHGPPGCGKTSIANALAGELQVPFISISAPSVV 276 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GESE +R++FD+AR APC++FFDE+D+I + + QLLT M Sbjct: 277 SGMSGESEKKIRDLFDEARSLAPCLVFFDEIDAITPK--RDGGAQREMERRIVAQLLTSM 334 Query: 390 DGMNAKKT----VFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 D + +KT V IIGATNRPD +D AL R GR D+ I + +P Sbjct: 335 DELTMEKTNGKPVIIIGATNRPDSLDAALRRAGRFDREICLNVP 378
>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297| Length = 733 Score = 186 bits (473), Expect = 2e-47 Identities = 91/160 (56%), Positives = 117/160 (73%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L E V++P+++PE F + P +G+L +GPPG GKTLLAKA+ANE ANFIS+KGPELL Sbjct: 467 LMEAVEWPLKYPEVFRAANIKPPRGILLFGPPGTGKTLLAKAVANESNANFISVKGPELL 526 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + W GESE +VRE+F KAR APCV+FFDE+DS+A + ++QLLTE+ Sbjct: 527 SKWVGESEKHVREMFRKARQVAPCVIFFDEIDSLAPR--RGGIGDSHVTERVVSQLLTEL 584 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG+ K V +I ATNRPD+IDPALLRPGRL++ IYIP P Sbjct: 585 DGLEELKDVVVIAATNRPDMIDPALLRPGRLERHIYIPPP 624 Score = 166 bits (419), Expect = 4e-41 Identities = 80/160 (50%), Positives = 112/160 (70%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E ++ P++HPE F++ G+ P KGVL YGPPG GKTL+AKA+ANE A+FI I GPE++ Sbjct: 194 VREMIELPLKHPELFQRLGIEPPKGVLLYGPPGTGKTLIAKAVANEVDAHFIPISGPEIM 253 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + ++GESE +REIF++A+ +AP ++F DE+DSIA + + QLL M Sbjct: 254 SKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPK---REEVTGEVERRVVAQLLALM 310 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG+ A+ V +I ATNRPD IDPAL RPGR D+ I I +P Sbjct: 311 DGLEARGDVIVIAATNRPDAIDPALRRPGRFDREIEIGVP 350
>SAV_SULAC (Q07590) SAV protein| Length = 780 Score = 182 bits (463), Expect = 4e-46 Identities = 90/160 (56%), Positives = 114/160 (71%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+E V++P+ PE F K G++P KG+L +GPPG GKT+LAKA+A E ANFI+++GPE+L Sbjct: 499 LREAVEWPLRFPELFTKSGVTPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEIL 558 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + W GESE +REIF KAR +AP V+FFDE+DSIA +NQLL EM Sbjct: 559 SKWVGESEKAIREIFRKARQAAPTVIFFDEIDSIAP--IRGLSTDSGVTERIVNQLLAEM 616 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG+ V II ATNRPDI+DPALLRPGR D+LIY+P P Sbjct: 617 DGIVPLNKVVIIAATNRPDILDPALLRPGRFDRLIYVPPP 656 Score = 162 bits (411), Expect = 4e-40 Identities = 79/160 (49%), Positives = 110/160 (68%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V++P+ HPE F++ G+ P KG+L YGPPG GKTLLA+A+ANE A FI++ GPE++ Sbjct: 224 IREIVEWPMRHPELFQRLGIDPPKGILLYGPPGTGKTLLARALANEIGAYFITVNGPEIM 283 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + ++GESE +REIF +A +AP ++F DE+D+IA + + QLLT M Sbjct: 284 SKFYGESEQRIREIFKEAEENAPSIIFIDEIDAIAPK---REDVTGEVEKRVVAQLLTLM 340 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG+ + V +IGATNRPD IDPAL RPGR D+ I I P Sbjct: 341 DGIKGRGRVIVIGATNRPDAIDPALRRPGRFDREIEIRPP 380
>VAT_THEAC (O05209) VCP-like ATPase| Length = 745 Score = 181 bits (460), Expect = 8e-46 Identities = 90/160 (56%), Positives = 113/160 (70%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++ETV+ P+ P+ F++ G+ PSKG L YGPPG GKTLLAKA+A E ANFISIKGPE+L Sbjct: 479 IKETVELPLLKPDVFKRLGIRPSKGFLLYGPPGVGKTLLAKAVATESNANFISIKGPEVL 538 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + W GESE +REIF KA+ AP ++F DE+DSIA + +NQLLT + Sbjct: 539 SKWVGESEKAIREIFKKAKQVAPAIVFLDEIDSIAPR--RGTTSDSGVTERIVNQLLTSL 596 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG+ V +IGATNRPDI+DPALLR GR D+LIYIP P Sbjct: 597 DGIEVMNGVVVIGATNRPDIMDPALLRAGRFDKLIYIPPP 636 Score = 167 bits (424), Expect = 1e-41 Identities = 82/162 (50%), Positives = 113/162 (69%) Frame = +3 Query: 24 GXLQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPE 203 G ++E ++ P++HPE FE+ G++P KGV+ YGPPG GKTL+A+A+ANE ANF+SI GPE Sbjct: 200 GKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLIARAVANESGANFLSINGPE 259 Query: 204 LLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLT 383 +++ ++G+SE +REIF KA +AP ++F DE+DSIA + + QLLT Sbjct: 260 IMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPK---REEVQGEVERRVVAQLLT 316 Query: 384 EMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 MDGM + V +IGATNR D IDPAL RPGR D+ I I +P Sbjct: 317 LMDGMKERGHVIVIGATNRIDAIDPALRRPGRFDREIEIGVP 358
>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 856 Score = 181 bits (459), Expect = 1e-45 Identities = 86/153 (56%), Positives = 113/153 (73%) Frame = +3 Query: 51 PVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGES 230 PV +P++F+ G+ GVL GPPGCGKTLLAKA+ANE NFIS+KGPELL M+ GES Sbjct: 600 PVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGES 659 Query: 231 EANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKK 410 E VR++F +A+ SAPCV+FFDE+D++ + +NQLLTEMDG+ A++ Sbjct: 660 ERAVRQVFQRAKNSAPCVIFFDEVDALCPR---RSDRETGASVRVVNQLLTEMDGLEARQ 716 Query: 411 TVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 VFI+ ATNRPDIIDPA+LRPGRLD+ +++ LP Sbjct: 717 QVFIMAATNRPDIIDPAILRPGRLDKTLFVGLP 749 Score = 130 bits (328), Expect = 2e-30 Identities = 68/155 (43%), Positives = 95/155 (61%), Gaps = 3/155 (1%) Frame = +3 Query: 54 VEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE 233 + HPE + G+ P +GVL +GPPGCGKTLLA AIA E + + PE+++ GESE Sbjct: 284 MRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESE 343 Query: 234 ANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMN---A 404 +RE+F++A +APC++F DE+D+I + + QLLT MD +N A Sbjct: 344 QKLRELFEQAVSNAPCIIFIDEIDAITPK---REVASKDMERRIVAQLLTCMDDLNNVAA 400 Query: 405 KKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 V +IGATNRPD +DPAL R GR D+ I + +P Sbjct: 401 TARVLVIGATNRPDSLDPALRRAGRFDREICLGIP 435
>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 855 Score = 180 bits (456), Expect = 2e-45 Identities = 84/153 (54%), Positives = 111/153 (72%) Frame = +3 Query: 51 PVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGES 230 PV +P++F G+ G+L GPPGCGKTLLAKA+ANE NFIS+KGPELL M+ GES Sbjct: 599 PVRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGES 658 Query: 231 EANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKK 410 E VR++F +A+ SAPCV+FFDE+D++ + +NQLLTEMDG+ ++ Sbjct: 659 ERAVRQVFQRAKNSAPCVIFFDEVDALCPR---RSDRETGASVRVVNQLLTEMDGLETRQ 715 Query: 411 TVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 VFI+ ATNRPDIIDPA+LRPGRLD+ +++ LP Sbjct: 716 QVFILAATNRPDIIDPAILRPGRLDKTLFVGLP 748 Score = 132 bits (332), Expect = 5e-31 Identities = 68/155 (43%), Positives = 96/155 (61%), Gaps = 3/155 (1%) Frame = +3 Query: 54 VEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE 233 + HPE ++ G+ P +GVL +GPPGCGKTLLA AIA E + + PE+++ GESE Sbjct: 283 MRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESE 342 Query: 234 ANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMN---A 404 +RE+FD+A +APC++F DE+D+I + + QLLT MD +N A Sbjct: 343 QKLRELFDQAVSNAPCIVFIDEIDAITPK---REVASKDMERRIVAQLLTCMDDLNNVAA 399 Query: 405 KKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 V +IGATNRPD +DPAL R GR D+ + + +P Sbjct: 400 TARVLVIGATNRPDSLDPALRRAGRFDREVCLGIP 434
>PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 948 Score = 178 bits (451), Expect = 9e-45 Identities = 89/159 (55%), Positives = 115/159 (72%), Gaps = 2/159 (1%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L++T+Q P++ PE F + G+ P GVL YGPPG GKTLLAKA+A E F+SIKGPELL Sbjct: 667 LRDTLQLPLQFPELFSQ-GLKPRSGVLLYGPPGTGKTLLAKAVATELSLEFVSIKGPELL 725 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M+ GESEANVR +F+KAR S+PCV+FFDELDSIA ++QLL E+ Sbjct: 726 NMYVGESEANVRNVFEKARNSSPCVIFFDELDSIAPH-RGNSSDSGNVMDRVVSQLLAEL 784 Query: 390 DGMNA--KKTVFIIGATNRPDIIDPALLRPGRLDQLIYI 500 D ++ K VF+IGATNRPD++DP+LLRPGR D+L+Y+ Sbjct: 785 DSISKDNNKYVFVIGATNRPDLLDPSLLRPGRFDKLVYL 823
>PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1381 Score = 178 bits (451), Expect = 9e-45 Identities = 90/161 (55%), Positives = 114/161 (70%), Gaps = 4/161 (2%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 + ET+Q P+E PE F K GM G+LFYGPPG GKTLLAKAIA E NF S+KGPELL Sbjct: 1003 ITETIQLPLERPELFAK-GMKKRSGILFYGPPGTGKTLLAKAIATEYSLNFFSVKGPELL 1061 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M+ GESEANVR +F +AR + PCV+FFDELDS+A + ++QLL E+ Sbjct: 1062 NMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPK-RGNQGDSGGVMDRIVSQLLAEL 1120 Query: 390 DGMNAKK----TVFIIGATNRPDIIDPALLRPGRLDQLIYI 500 DGM+ + VF+IGATNRPD++DPALLRPGR D+++Y+ Sbjct: 1121 DGMSGGEGGGGGVFVIGATNRPDLLDPALLRPGRFDKMLYL 1161
>PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1459 Score = 177 bits (450), Expect = 1e-44 Identities = 91/161 (56%), Positives = 113/161 (70%), Gaps = 4/161 (2%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L ET+Q P+E PE F K GM G+LFYGPPG GKTLLAKAIA E NF S+KGPELL Sbjct: 1042 LVETIQLPLERPELFAK-GMKKRSGILFYGPPGTGKTLLAKAIATEFSLNFFSVKGPELL 1100 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M+ GESEANVR +F +AR + PCV+FFDELDS+A + ++QLL E+ Sbjct: 1101 NMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPK-RGNQGDSGGVMDRIVSQLLAEL 1159 Query: 390 DGMNAKKT----VFIIGATNRPDIIDPALLRPGRLDQLIYI 500 DGMN + VF+IGATNRPD++D ALLRPGR D+++Y+ Sbjct: 1160 DGMNGGEENSGGVFVIGATNRPDLLDTALLRPGRFDKMLYL 1200
>PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) (ClaPEX6)| Length = 1388 Score = 177 bits (449), Expect = 1e-44 Identities = 90/159 (56%), Positives = 112/159 (70%), Gaps = 4/159 (2%) Frame = +3 Query: 36 ETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 215 ET+Q P+E PE F K GM G+LFYGPPG GKTLLAKAIA E NF S+KGPELL M Sbjct: 1008 ETIQLPLERPELFAK-GMKKRSGILFYGPPGTGKTLLAKAIATEYSLNFFSVKGPELLNM 1066 Query: 216 WFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDG 395 + GESEANVR +F +AR + PCV+FFDELDS+A + ++QLL E+DG Sbjct: 1067 YIGESEANVRRVFQRARDARPCVVFFDELDSVAPK-RGNQGDSGGVMDRIVSQLLAELDG 1125 Query: 396 M----NAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYI 500 M + VF+IGATNRPD++DPALLRPGR D+++Y+ Sbjct: 1126 MSGGDDTSGGVFVIGATNRPDLLDPALLRPGRFDKMLYL 1164
>CDCH_HALSA (Q9HPF0) Protein cdcH| Length = 742 Score = 176 bits (446), Expect = 3e-44 Identities = 85/160 (53%), Positives = 112/160 (70%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E+V++P+ PEKF + G+ P GVL YGPPG GKTL+AKA+ANE ANFIS++GP+LL Sbjct: 474 VKESVEWPLNQPEKFTRMGVEPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLL 533 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + W GESE +R+ F KAR AP V+FFDELDS+A +NQLLTE+ Sbjct: 534 SKWVGESEKAIRQTFRKARQVAPTVIFFDELDSLAP--GRGQTGGNNVSERVVNQLLTEL 591 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG+ + V +I ATNRPDIIDPAL+R GR D+L+ + P Sbjct: 592 DGLEEMEEVMVIAATNRPDIIDPALIRSGRFDRLVQVGQP 631 Score = 159 bits (401), Expect = 5e-39 Identities = 78/160 (48%), Positives = 109/160 (68%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V+ P++HP+ F+K G+ P +GVL +GPPG GKTLLAKA+ANE A+F SI GPE++ Sbjct: 201 VREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSASFFSIAGPEII 260 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + ++GESE +REIF+ A+ +P ++F DELDSIA + + QLLT M Sbjct: 261 SKYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPK---REDVTGEVERRVVAQLLTMM 317 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG+ + V +I ATNR D +DPAL RPGR D+ I I +P Sbjct: 318 DGLEGRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVP 357
>PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS8) Length = 1030 Score = 175 bits (444), Expect = 6e-44 Identities = 87/163 (53%), Positives = 113/163 (69%), Gaps = 1/163 (0%) Frame = +3 Query: 24 GXLQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPE 203 G + +T+ P++HPE F GM G+LFYGPPG GKTL+AKAIA NF S+KGPE Sbjct: 742 GEILDTIDMPLKHPELFTS-GMKKRSGILFYGPPGTGKTLMAKAIATNFSLNFFSVKGPE 800 Query: 204 LLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLT 383 LL M+ GESEANVR +F KAR + PCV+FFDE+DS+A + ++QLL Sbjct: 801 LLNMYIGESEANVRRVFQKAREAKPCVIFFDEIDSVAPK-RGNQGDSGGVMDRIVSQLLA 859 Query: 384 EMDGMNAKKT-VFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 E+DGM+ VF+IGATNRPD++D ALLRPGR D+L+Y+ +P Sbjct: 860 ELDGMSTDADGVFVIGATNRPDLLDEALLRPGRFDKLLYLGIP 902
>PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1000 Score = 175 bits (443), Expect = 7e-44 Identities = 87/160 (54%), Positives = 113/160 (70%), Gaps = 1/160 (0%) Frame = +3 Query: 24 GXLQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPE 203 G + +T+ P++HPE F GM G+LFYGPPG GKTLLAKAIA+ NF S+KGPE Sbjct: 712 GEIMDTIDMPLKHPELFSS-GMKKRSGILFYGPPGTGKTLLAKAIASNFSLNFFSVKGPE 770 Query: 204 LLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLT 383 LL M+ GESEANVR +F KAR + PCV+FFDELDS+A + ++QLL Sbjct: 771 LLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSVAPK-RGNQGDSGGVMDRIVSQLLA 829 Query: 384 EMDGMNA-KKTVFIIGATNRPDIIDPALLRPGRLDQLIYI 500 E+DGM++ VF+IGATNRPD++D ALLRPGR D+++Y+ Sbjct: 830 ELDGMSSGGDGVFVIGATNRPDLLDEALLRPGRFDKMLYL 869
>PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 978 Score = 174 bits (441), Expect = 1e-43 Identities = 83/155 (53%), Positives = 114/155 (73%) Frame = +3 Query: 36 ETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 215 ET+Q P+EHPE G+ S G+L +GPPG GKTLLAKA+A EC F+S+KGPEL+ M Sbjct: 717 ETIQLPLEHPELLS-LGLRRS-GLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINM 774 Query: 216 WFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDG 395 + G+SE NVRE+F +AR +APC++FFDELDS+A ++QLL E+DG Sbjct: 775 YVGQSEENVREVFARARAAAPCIIFFDELDSLA-PSRGRSGDSGGVMDRVVSQLLAELDG 833 Query: 396 MNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYI 500 +++ + VF+IGATNRPD++DPALLRPGR D+L+++ Sbjct: 834 LHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFV 868 Score = 36.2 bits (82), Expect = 0.053 Identities = 26/112 (23%), Positives = 41/112 (36%) Frame = +3 Query: 105 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCV 284 VL GPPG GKT A + + + + L E ++ F +AR P V Sbjct: 466 VLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRCRPVV 525 Query: 285 LFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKKTVFIIGATNR 440 L LD + L LL + D ++ + ++ T+R Sbjct: 526 LLLTALDLLGRD--RDGLGEDARVVATLRHLLLDEDPLSRCPPLMVVATTSR 575
>PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 981 Score = 174 bits (441), Expect = 1e-43 Identities = 83/155 (53%), Positives = 114/155 (73%) Frame = +3 Query: 36 ETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 215 ET+Q P+EHPE G+ S G+L +GPPG GKTLLAKA+A EC F+S+KGPEL+ M Sbjct: 720 ETIQLPLEHPELLS-LGLRRS-GLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINM 777 Query: 216 WFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDG 395 + G+SE NVRE+F +AR +APC++FFDELDS+A ++QLL E+DG Sbjct: 778 YVGQSEENVREVFARARAAAPCIIFFDELDSLA-PSRGRSGDSGGVMDRVVSQLLAELDG 836 Query: 396 MNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYI 500 +++ + VF+IGATNRPD++DPALLRPGR D+L+++ Sbjct: 837 LHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFV 871 Score = 36.6 bits (83), Expect = 0.041 Identities = 25/112 (22%), Positives = 41/112 (36%) Frame = +3 Query: 105 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCV 284 VL GPPG GKT A + + + + L E ++ F +AR P V Sbjct: 467 VLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRAVETKLQATFSRARRCRPAV 526 Query: 285 LFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKKTVFIIGATNR 440 L +D + L LL + D ++ + ++ T+R Sbjct: 527 LLLTAVDLLGRD--RDGLGEDARVAATLRHLLLDEDALSRCPPLMVVATTSR 576
>PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 980 Score = 174 bits (441), Expect = 1e-43 Identities = 83/155 (53%), Positives = 114/155 (73%) Frame = +3 Query: 36 ETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 215 ET+Q P+EHPE G+ S G+L +GPPG GKTLLAKA+A EC F+S+KGPEL+ M Sbjct: 719 ETIQLPLEHPELLS-LGLRRS-GLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINM 776 Query: 216 WFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDG 395 + G+SE NVRE+F +AR +APC++FFDELDS+A ++QLL E+DG Sbjct: 777 YVGQSEENVREVFARARAAAPCIIFFDELDSLA-PSRGRSGDSGGVMDRVVSQLLAELDG 835 Query: 396 MNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYI 500 +++ + VF+IGATNRPD++DPALLRPGR D+L+++ Sbjct: 836 LHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFV 870 Score = 47.4 bits (111), Expect = 2e-05 Identities = 29/118 (24%), Positives = 48/118 (40%) Frame = +3 Query: 87 MSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 266 ++ + VL GPPGCGKT + A + + + + L G E ++ IF +AR Sbjct: 460 LTGTSSVLLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQAIFSRAR 519 Query: 267 GSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKKTVFIIGATNR 440 P VL +D + L LL D +N+ + ++ T+R Sbjct: 520 RCRPAVLLLTAVDLLGRD--RDGLGEDARVMAVLRHLLLNEDPLNSCPPLMVVATTSR 575
>PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1135 Score = 174 bits (440), Expect = 2e-43 Identities = 86/158 (54%), Positives = 112/158 (70%), Gaps = 3/158 (1%) Frame = +3 Query: 36 ETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 215 +T++ P++HPE F K GM G+LFYGPPG GKTLLAKAIA NF S+KGPELL M Sbjct: 827 DTIEMPLKHPELFSK-GMKKRSGILFYGPPGTGKTLLAKAIATNFALNFFSVKGPELLNM 885 Query: 216 WFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDG 395 + GESEANVR +F KAR + PCV+FFDELDS+A + ++QLL E+DG Sbjct: 886 YIGESEANVRRVFQKARDAKPCVIFFDELDSVAPK-RGNQGDSGGVMDRIVSQLLAELDG 944 Query: 396 MNAKK---TVFIIGATNRPDIIDPALLRPGRLDQLIYI 500 M+ + VF++GATNRPD++D ALLRPGR D+++Y+ Sbjct: 945 MSGAEGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYL 982
>PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1017 Score = 173 bits (438), Expect = 3e-43 Identities = 88/158 (55%), Positives = 111/158 (70%), Gaps = 1/158 (0%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 + ET+ P++HPE F G+ G+LFYGPPG GKTLLAKAIA NF S+KGPELL Sbjct: 730 IMETIDLPLKHPELFGS-GLKKRSGILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELL 788 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M+ GESEANVR +F KAR + PCV+FFDE+DS+A + ++QLL E+ Sbjct: 789 NMYIGESEANVRRVFQKARDAKPCVIFFDEVDSVAPK-RGNQGDSGGVMDRIVSQLLAEL 847 Query: 390 DGMNAK-KTVFIIGATNRPDIIDPALLRPGRLDQLIYI 500 DGM++ VFIIGATNRPD++D ALLRPGR D+LIY+ Sbjct: 848 DGMSSDGDGVFIIGATNRPDLLDEALLRPGRFDKLIYL 885
>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 396 Score = 170 bits (430), Expect = 2e-42 Identities = 81/160 (50%), Positives = 107/160 (66%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+E ++ P++HPE FE+ G+ P KGVL YGPPGCGKTL+AKAIA+E A FI + G EL+ Sbjct: 149 LREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKAIAHEVNATFIRVVGSELV 208 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE V E+F+ A+ AP ++F DE+D+I + L QLL EM Sbjct: 209 RKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRLDETTGGEREVNRTLMQLLAEM 268 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + + V +I ATNRPDI+DPALLRPGR D+LI +PLP Sbjct: 269 DGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLP 308
>PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1198 Score = 169 bits (429), Expect = 3e-42 Identities = 84/162 (51%), Positives = 110/162 (67%), Gaps = 5/162 (3%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 + +T+ P++HPE F G+ G+LFYGPPG GKTLLAKAIA NF S+KGPELL Sbjct: 851 IMDTIDMPLKHPELFSN-GLKKRSGILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELL 909 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M+ GESEANVR +F KAR + PCV+FFDELDS+A + ++QLL E+ Sbjct: 910 NMYIGESEANVRRVFQKARDAKPCVIFFDELDSVAPK-RGNQGDSGGVMDRIVSQLLAEL 968 Query: 390 DGMNAKKT-----VFIIGATNRPDIIDPALLRPGRLDQLIYI 500 DGM+ VF++GATNRPD++D ALLRPGR D+++Y+ Sbjct: 969 DGMSGGAEGGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYL 1010
>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 430 Score = 169 bits (428), Expect = 4e-42 Identities = 81/160 (50%), Positives = 108/160 (67%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V+ P++HPE FEK G+ P KG+L YGPPG GKTLLAKA+A E A FI + G EL+ Sbjct: 182 IREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELV 241 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE + V++IF A+ AP ++F DE+D+IA + L QLL EM Sbjct: 242 KKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEM 301 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG +A+ V IIGATNRPDI+DPA+LRPGR D++I +P P Sbjct: 302 DGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAP 341
>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 169 bits (428), Expect = 4e-42 Identities = 80/160 (50%), Positives = 107/160 (66%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+E ++ P++HPE FE+ G+ P KGVL YGPPGCGKTL+AKA+A+E A FI + G EL+ Sbjct: 152 LREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELV 211 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE V E+F+ A+ AP ++F DE+D+I + L QLL EM Sbjct: 212 RKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEM 271 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + + V +I ATNRPDI+DPALLRPGR D+LI +PLP Sbjct: 272 DGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLP 311
>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 169 bits (428), Expect = 4e-42 Identities = 80/160 (50%), Positives = 107/160 (66%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+E ++ P++HPE FE+ G+ P KGVL YGPPGCGKTL+AKA+A+E A FI + G EL+ Sbjct: 152 LREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELV 211 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE V E+F+ A+ AP ++F DE+D+I + L QLL EM Sbjct: 212 RKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEM 271 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + + V +I ATNRPDI+DPALLRPGR D+LI +PLP Sbjct: 272 DGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLP 311
>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 397 Score = 169 bits (428), Expect = 4e-42 Identities = 80/160 (50%), Positives = 106/160 (66%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+E ++ P++HPE FE+ G+ P KGVL YGPPGCGKTL+AKA+AN A FI + G EL+ Sbjct: 150 LREAIELPLKHPELFEQVGIEPPKGVLLYGPPGCGKTLMAKAVANHVNATFIRVVGSELV 209 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE V E+F+ A+ AP ++F DE+D+I + L QLL EM Sbjct: 210 RKFIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEM 269 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + + V +I ATNRPDI+DPALLRPGR D+LI +PLP Sbjct: 270 DGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLP 309
>PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1021 Score = 168 bits (425), Expect = 9e-42 Identities = 84/164 (51%), Positives = 112/164 (68%), Gaps = 1/164 (0%) Frame = +3 Query: 12 KMSNGXLQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISI 191 +M G + +T+ P++ PE F GM G+LFYGPPG GKTLLAKA+A NF S+ Sbjct: 729 EMVKGEILDTIDMPLKFPELFAS-GMKKRSGILFYGPPGTGKTLLAKAVATNFSLNFFSV 787 Query: 192 KGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLN 371 KGPELL M+ GESEANVR +F +AR + PCV+FFDELDS+A + ++ Sbjct: 788 KGPELLNMYIGESEANVRRVFQRARDAKPCVIFFDELDSVAPK-RGNQGDSGGVMDRIVS 846 Query: 372 QLLTEMDGMN-AKKTVFIIGATNRPDIIDPALLRPGRLDQLIYI 500 QLL E+DG++ +F+IGATNRPD++D ALLRPGR D+L+Y+ Sbjct: 847 QLLAELDGLSTGGDGLFVIGATNRPDLLDEALLRPGRFDKLLYL 890
>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 420 Score = 167 bits (424), Expect = 1e-41 Identities = 80/160 (50%), Positives = 106/160 (66%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 LQE V+ P+ PE+F + G+ P KGVL YG PG GKTLLAKA+A+ A FI + G EL+ Sbjct: 171 LQEAVELPLTSPERFARIGIEPPKGVLLYGLPGTGKTLLAKAVAHRTNATFIRVVGSELV 230 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + G+ VREIF+ AR AP ++F DELDSIA + L QLL EM Sbjct: 231 QKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTGADREVQRTLMQLLAEM 290 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + +K + II ATNRPD++DPA+LRPGR D+L+++P+P Sbjct: 291 DGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMP 330
>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 421 Score = 167 bits (423), Expect = 2e-41 Identities = 80/160 (50%), Positives = 106/160 (66%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 LQE V+ P+ PE+F + G+ P KGVL YG PG GKTLLAKA+A+ A FI + G EL+ Sbjct: 171 LQEAVELPLIEPERFARIGIEPPKGVLLYGLPGTGKTLLAKAVAHRTNATFIRVVGSELV 230 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + G+ VREIF+ AR AP ++F DELDSIA + L QLL EM Sbjct: 231 QKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTGADREVQRTLMQLLAEM 290 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + +K + II ATNRPD++DPA+LRPGR D+L+++P+P Sbjct: 291 DGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMP 330
>PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS5) Length = 1165 Score = 167 bits (423), Expect = 2e-41 Identities = 83/158 (52%), Positives = 110/158 (69%), Gaps = 3/158 (1%) Frame = +3 Query: 36 ETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 215 +T+ P++HPE F G+ G+LFYGPPG GKTLLAKAIA NF S+KGPELL M Sbjct: 833 DTIDMPMKHPELFSN-GIKKRSGILFYGPPGTGKTLLAKAIATNFALNFFSVKGPELLNM 891 Query: 216 WFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDG 395 + GESEANVR++F +AR + PCV+FFDELDS+A + ++QLL E+DG Sbjct: 892 YIGESEANVRKVFQRARDAKPCVVFFDELDSVAPK-RGNQGDSEGVMDRIVSQLLAELDG 950 Query: 396 M---NAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYI 500 M + VF++GATNRPD++D ALLRPGR D+++Y+ Sbjct: 951 MSGGDGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYL 988 Score = 34.3 bits (77), Expect = 0.20 Identities = 29/127 (22%), Positives = 56/127 (44%), Gaps = 3/127 (2%) Frame = +3 Query: 132 GKTLLAKAIANECQANFISIKGPELLTMWFGESE--ANVREIFDK-ARGSAPCVLFFDEL 302 GK+LL ++A EC + + I G E+L ES+ +R D+ G P ++F + Sbjct: 575 GKSLLVHSLALECGVHLVEIDGYEVLNP-SSESKTIGTIRGKLDRVVEGCTPLIVFIKHI 633 Query: 303 DSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRL 482 +++ + +N+L+ D AK V + +TN D + L + Sbjct: 634 EALTKK---SEQQQKDSLAVKINELI---DEYTAKPGVLFVASTNDSDNLSDELRAKFKF 687 Query: 483 DQLIYIP 503 + ++ +P Sbjct: 688 EIVLGVP 694
>PEX6_YARLI (P36966) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAY4) Length = 1024 Score = 166 bits (421), Expect = 3e-41 Identities = 83/157 (52%), Positives = 110/157 (70%), Gaps = 2/157 (1%) Frame = +3 Query: 36 ETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 215 +T++ P+++P F G+ G+LFYGPPG GKTLLAKAIA NF S+KGPELL M Sbjct: 733 DTIETPLKYPHWFSD-GVKKRSGILFYGPPGTGKTLLAKAIATTFSLNFFSVKGPELLNM 791 Query: 216 WFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDG 395 + GESEANVR +F KAR + PCV+FFDELDS+A Q ++QLL E+DG Sbjct: 792 YIGESEANVRRVFQKARDAKPCVVFFDELDSVAPQ-RGNQGDSGGVMDRIVSQLLAELDG 850 Query: 396 MNAK--KTVFIIGATNRPDIIDPALLRPGRLDQLIYI 500 M+ + VF++GATNRPD++D ALLRPGR D+++Y+ Sbjct: 851 MSTAGGEGVFVVGATNRPDLLDEALLRPGRFDKMLYL 887 Score = 34.7 bits (78), Expect = 0.15 Identities = 27/113 (23%), Positives = 48/113 (42%) Frame = +3 Query: 126 GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELD 305 G GK+ + +++A +C + I L+ ++ +R D+A G +PCV+ L+ Sbjct: 480 GVGKSTVLRSVAAQCGISVFEISCFGLIGDNEAQTLGTLRAKLDRAYGCSPCVVVLQHLE 539 Query: 306 SIATQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPAL 464 SIA + L +L + G V + +N PD I A+ Sbjct: 540 SIAKK--SDQDGKDEGIVSKLVDVLADYSGHG----VLLAATSNDPDKISEAI 586
>PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (Peroxisome| biogenesis disorder protein 1) Length = 1283 Score = 163 bits (412), Expect = 3e-40 Identities = 79/160 (49%), Positives = 108/160 (67%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L +T+Q P ++PE F + G+L YGPPG GKTLLA IA E + NFIS+KGPELL Sbjct: 852 LMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVIARESRMNFISVKGPELL 911 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + + G SE VR+IF +A+ + PC+LFFDE +SIA + +NQLLT++ Sbjct: 912 SKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPR---RGHDNTGVTDRVVNQLLTQL 968 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG+ + V+++ AT+RPD+IDPALLRPGRLD+ +Y P P Sbjct: 969 DGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPP 1008
>CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C (AtCDC48c)| Length = 820 Score = 163 bits (412), Expect = 3e-40 Identities = 78/153 (50%), Positives = 103/153 (67%) Frame = +3 Query: 51 PVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGES 230 P++ P+ ++ FG+ G L YGPPGCGKTL+AKA ANE ANF+ IKG ELL + GES Sbjct: 547 PIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKAAANEAGANFMHIKGAELLNKYVGES 606 Query: 231 EANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKK 410 E +R +F +AR APCV+FFDE+D++ T LNQ L E+DG ++ Sbjct: 607 ELAIRTLFQRARTCAPCVIFFDEVDALTT---SRGKEGAWVVERLLNQFLVELDG-GERR 662 Query: 411 TVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 V++IGATNRPD++DPA LRPGR L+Y+PLP Sbjct: 663 NVYVIGATNRPDVVDPAFLRPGRFGNLLYVPLP 695 Score = 130 bits (326), Expect = 3e-30 Identities = 72/170 (42%), Positives = 97/170 (57%), Gaps = 10/170 (5%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+ V +P+ +PE F+K G+ P G+LF+GPPGCGKT LA AIANE F I E++ Sbjct: 245 LEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEAGVPFYKISATEVI 304 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + G SE N+RE+F KA +AP ++F DE+D+I ++ + QLLT M Sbjct: 305 SGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSK---RENQQREMEKRIVTQLLTCM 361 Query: 390 DGMNAKKT----------VFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG K V +IGATNRPD +DPAL R GR + I + P Sbjct: 362 DGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAP 411
>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 407 Score = 163 bits (412), Expect = 3e-40 Identities = 77/160 (48%), Positives = 109/160 (68%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V+ P+++PE FEK G+ P KGVL YGPPG GKTLLAKA+A E A+F+ + G EL+ Sbjct: 160 IKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELV 219 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VR++F A+ +PC++F DE+D++A++ L QLL EM Sbjct: 220 KKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEM 279 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG +++ V II ATNRPDI+DPA+LRPGR D++I I +P Sbjct: 280 DGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMP 319
>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 436 Score = 162 bits (409), Expect = 6e-40 Identities = 80/160 (50%), Positives = 102/160 (63%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V+ P++ PE FEK G+ P KGVL YGPPG GKTLLAKA+AN A FI + PEL+ Sbjct: 191 IREVVEKPLKEPELFEKVGVEPPKGVLLYGPPGTGKTLLAKAVANHADATFIRLAAPELV 250 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VRE+F+ AR AP ++F DE+D+I + L QLL EM Sbjct: 251 QKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARRMRDATSGDREVQRTLTQLLAEM 310 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + + +I ATNR DI+DPALLRPGR D+ I IPLP Sbjct: 311 DGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPLP 350
>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 410 Score = 161 bits (407), Expect = 1e-39 Identities = 77/160 (48%), Positives = 104/160 (65%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++ETV+ P++ PE FEK G+ P KGVL YGPPG GKTLLAKA+A+E A FI I E + Sbjct: 163 VKETVELPLKKPELFEKIGIEPPKGVLLYGPPGTGKTLLAKAVAHETNATFIKIVASEFV 222 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VR +F+ A+ +P ++F DE+D++A + L QLL E+ Sbjct: 223 RKYIGEGARLVRGVFELAKEKSPSIIFIDEIDAVAAKRLKSSTSGDREVQRTLMQLLAEL 282 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG ++ V I+ ATNRPDI+DPALLRPGR D+ I +PLP Sbjct: 283 DGFESRGNVGIVAATNRPDILDPALLRPGRFDRFIEVPLP 322
>AFG2_YEAST (P32794) Protein AFG2| Length = 780 Score = 159 bits (402), Expect = 4e-39 Identities = 79/160 (49%), Positives = 104/160 (65%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E +Q P+E E F + G+S KGVL YGPPGC KTL AKA+A E NF+++KGPE+ Sbjct: 528 MKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIF 587 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GESE +REIF KAR +AP ++FFDE+D+++ L LL E+ Sbjct: 588 NKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPD---RDGSSTSAANHVLTSLLNEI 644 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG+ K V I+ ATNRPD ID ALLRPGRLD+ IY+ P Sbjct: 645 DGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYVGPP 684 Score = 140 bits (353), Expect = 2e-33 Identities = 68/160 (42%), Positives = 100/160 (62%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+ ++ P+ P F FG+SP +G+L +GPPG GKT+L + +AN A+ ++I GP ++ Sbjct: 257 LKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTSNAHVLTINGPSIV 316 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + + GE+EA +R+IF++AR P ++F DE+DSIA + LLT M Sbjct: 317 SKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPN--RANDDSGEVESRVVATLLTLM 374 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DGM A V +I ATNRP+ +DPAL RPGR DQ + I +P Sbjct: 375 DGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIP 414
>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 398 Score = 157 bits (398), Expect = 1e-38 Identities = 76/160 (47%), Positives = 104/160 (65%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V+ P+ PE F + G+ P KGVL YGPPG GKTLLAKA+AN+ +A FI + G E + Sbjct: 153 IREAVELPLLKPELFAEVGIEPPKGVLLYGPPGTGKTLLAKAVANQTRATFIRVVGSEFV 212 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VRE+F A+ AP ++F DELD+IA + + QLL E+ Sbjct: 213 QKYIGEGARLVREVFQLAKEKAPSIIFIDELDAIAARRTNSDTSGDREVQRTMMQLLAEL 272 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + + V +IGATNR DI+DPA+LRPGR D++I +PLP Sbjct: 273 DGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLP 312
>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1043 Score = 155 bits (392), Expect = 6e-38 Identities = 76/160 (47%), Positives = 104/160 (65%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L ET+++P ++ F + G+L YG PGCGKTLLA A+A +C NFIS+KGPE+L Sbjct: 709 LLETLEWPTKYEPIFVNCPLRLRSGILLYGYPGCGKTLLASAVAQQCGLNFISVKGPEIL 768 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + G SE N+RE+F++A+ PC+LFFDE DSIA + +NQLLT+M Sbjct: 769 NKFIGASEQNIRELFERAQSVKPCILFFDEFDSIAPK---RGHDSTGVTDRVVNQLLTQM 825 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG V+I+ AT+RPD+ID ALLRPGRLD+ + +P Sbjct: 826 DGAEGLDGVYILAATSRPDLIDSALLRPGRLDKSVICNIP 865
>PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1157 Score = 155 bits (391), Expect = 8e-38 Identities = 75/160 (46%), Positives = 105/160 (65%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L ET+++P ++ F + G+L YG PGCGKTLLA A+A +C NFISIKGPE+L Sbjct: 811 LLETLEWPTKYAPIFSSCPLRLRSGILLYGYPGCGKTLLASAVAAQCGLNFISIKGPEIL 870 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + G SE +VRE+F++A+ + PC+LFFDE DSIA + +NQ+LT+M Sbjct: 871 NKYIGPSEQSVRELFERAQAAKPCILFFDEFDSIAPK---RGHDSTGVTDRVVNQMLTQM 927 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG V+++ AT+RPD+ID ALLRPGRLD+ + +P Sbjct: 928 DGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMP 967 Score = 37.7 bits (86), Expect = 0.018 Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 6/95 (6%) Frame = +3 Query: 45 QYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN--ECQANFISIKGPELLTMW 218 QYP E S G L +G G GK+L+ +A + +F+ + + + Sbjct: 499 QYPTAQENLIESLSKIASGGSLLFGTSGSGKSLVISQVAQIVTNKGHFVKLLNCDKI--- 555 Query: 219 FGESEANVR----EIFDKARGSAPCVLFFDELDSI 311 ES N+R +IF + AP +L ++LDS+ Sbjct: 556 MSESYNNLRGIFEDIFSEVSWKAPSLLILEDLDSL 590
>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 392 Score = 153 bits (386), Expect = 3e-37 Identities = 76/160 (47%), Positives = 100/160 (62%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E ++ P+++PE F++ G+ P KGVL YGPPG GKTLLAKA+A E A FI + E Sbjct: 146 IREVIELPLKNPELFKEIGIDPPKGVLLYGPPGTGKTLLAKAVATESNATFIQVVASEFA 205 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VRE+F+ AR AP ++F DE+D+I + L QLL E+ Sbjct: 206 QKFVGEGARIVREVFELARRKAPSIVFIDEIDAIGAKRVDMGTSGEREIQRTLMQLLAEI 265 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG V II ATNR DI+DPALLRPGR D+LI +PLP Sbjct: 266 DGFKPLDNVKIIAATNRLDILDPALLRPGRFDRLIEVPLP 305
>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 409 Score = 152 bits (385), Expect = 4e-37 Identities = 76/160 (47%), Positives = 102/160 (63%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 + E V P+++P F + G+ P KGVL +GPPG GKTLLAKA+A E +A FI + G EL+ Sbjct: 151 IYEAVVLPIKNPHLFRELGIDPPKGVLLHGPPGTGKTLLAKAVAGETEATFIRVVGSELV 210 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VREIF AR AP +LF DE+D+IA++ + QLL E+ Sbjct: 211 NKFIGEGARLVREIFRLAREKAPSILFIDEIDAIASKRVDIGTSGDREVQRTMLQLLAEL 270 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + V +I ATNR D+IDPA+LRPGR D++I +PLP Sbjct: 271 DGFDPLDNVKVIAATNRLDLIDPAVLRPGRFDRIIEVPLP 310
>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 634 Score = 152 bits (385), Expect = 4e-37 Identities = 76/161 (47%), Positives = 103/161 (63%), Gaps = 1/161 (0%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E ++Y ++ P KF+K G P KGVL YG PG GKTLLAKAIA E FIS+ G + + Sbjct: 167 VKEIIEY-LKDPVKFQKLGGRPPKGVLLYGEPGVGKTLLAKAIAGEAHVPFISVSGSDFV 225 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIA-TQXXXXXXXXXXXXXXXLNQLLTE 386 M+ G A VR++F+ A+ APC++F DE+D++ + LNQLL E Sbjct: 226 EMFVGVGAARVRDLFETAKKHAPCIIFIDEIDAVGRARGAIPVGGGHDEREQTLNQLLVE 285 Query: 387 MDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 MDG + + +I ATNRPDI+DPALLRPGR D+ I+IP P Sbjct: 286 MDGFDTSDGIIVIAATNRPDILDPALLRPGRFDRQIFIPKP 326
>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)| Length = 603 Score = 152 bits (384), Expect = 5e-37 Identities = 73/161 (45%), Positives = 103/161 (63%), Gaps = 1/161 (0%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 LQ+ V++P++H F K G+SP +G+L +GPPGC KT LAKA AN QA+F S+ EL Sbjct: 298 LQQAVEWPIKHSAAFVKMGISPMRGILLHGPPGCSKTTLAKAAANAAQASFFSLSCAELF 357 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIA-TQXXXXXXXXXXXXXXXLNQLLTE 386 +M+ GE EA +R F +AR ++P ++FFDE D +A + L+ LLTE Sbjct: 358 SMYVGEGEALLRNTFQRARLASPSIIFFDEADVVACKRGDESSSNSSTVGERLLSTLLTE 417 Query: 387 MDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 MDG+ K + ++ ATNRP ID AL+RPGR D ++Y+P P Sbjct: 418 MDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPP 458 Score = 94.7 bits (234), Expect = 1e-19 Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 7/167 (4%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+E + +P +P + G+ +G+L YGPPG GKT L +A+ EC A+ I + + Sbjct: 34 LRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSVH 93 Query: 210 TMWFGESEANVREIFDKARGSA----PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQL 377 GESE +RE F +A A P V+F DE+D + + +QL Sbjct: 94 RAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPRRDARREQDVRIA----SQL 149 Query: 378 LTEMDG---MNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 T MD ++ V ++ +TNR D IDPAL R GR D L+ + P Sbjct: 150 FTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTP 196
>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)| Length = 610 Score = 151 bits (381), Expect = 1e-36 Identities = 71/160 (44%), Positives = 103/160 (64%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 +QE V+Y ++ P +F+K G KG+L GPPG GKTLLAKAIA E + F +I G + + Sbjct: 164 VQELVEY-LKEPSRFQKLGGKIPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFV 222 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M+ G + VR++F+ +R APC++F DE+D++ Q LNQ+L EM Sbjct: 223 EMFVGVGASRVRDMFEHSRKVAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEM 282 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + + + +I ATNRPD++DPALLRPGR D+ I++ LP Sbjct: 283 DGFDGNEGIILIAATNRPDVLDPALLRPGRFDRQIFVALP 322
>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)| Length = 613 Score = 151 bits (381), Expect = 1e-36 Identities = 72/160 (45%), Positives = 102/160 (63%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 + E V+Y ++ P +F+K G KG+L GPPG GKTLLAKAIA E + F +I G + + Sbjct: 164 VSELVEY-LKEPSRFQKLGGKIPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFV 222 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M+ G + VR++F+ AR SAPC++F DE+D++ Q LNQ+L EM Sbjct: 223 EMFVGVGASRVRDMFEHARKSAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEM 282 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + + V +I ATNRPD++DPALLRPGR D+ + + LP Sbjct: 283 DGFDGNEGVILIAATNRPDVLDPALLRPGRFDRQVIVALP 322
>PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 protein)| Length = 402 Score = 150 bits (379), Expect = 2e-36 Identities = 72/160 (45%), Positives = 101/160 (63%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E ++ PV+HPE F+ G++ KGVL YGPPG GKTLLA+A+A+ + FI + G EL+ Sbjct: 157 IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELV 216 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VRE+F AR AP ++F DE+DSI + + +LL ++ Sbjct: 217 QKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQL 276 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG A K + +I ATNR DI+DPALLRPGR+D+ I P P Sbjct: 277 DGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPP 316
>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 393 Score = 150 bits (379), Expect = 2e-36 Identities = 75/160 (46%), Positives = 100/160 (62%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+E V+ P+++PE F + G+ P KGVL YGPPG GKT+LAKA+A E A FI + E Sbjct: 146 LREVVELPLKNPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFA 205 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VRE+F+ A+ AP ++F DE+D+I + L QLL E+ Sbjct: 206 QKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAEL 265 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + V II ATNR DI+DPALLRPGR D++I +PLP Sbjct: 266 DGFDPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLP 305
>PRS8_DROME (O18413) 26S protease regulatory subunit 8| Length = 405 Score = 150 bits (379), Expect = 2e-36 Identities = 72/160 (45%), Positives = 101/160 (63%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E ++ PV+HPE F+ G++ KGVL YGPPG GKTLLA+A+A+ + FI + G EL+ Sbjct: 160 IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELV 219 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VRE+F AR AP ++F DE+DSI + + +LL ++ Sbjct: 220 QKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQL 279 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG A K + +I ATNR DI+DPALLRPGR+D+ I P P Sbjct: 280 DGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPP 319
>PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 425 Score = 150 bits (378), Expect = 3e-36 Identities = 72/160 (45%), Positives = 101/160 (63%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V+ P+ HPEKF K G+ P KGVL YGPPG GKTLLA+A+AN A FI + G EL+ Sbjct: 179 MREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 238 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VRE+F AR C++FFDE+D+I + +++ ++ Sbjct: 239 QKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQL 298 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG +A+ + ++ ATNRPD +DPALLRPGRLD+ + LP Sbjct: 299 DGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 338
>PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 150 bits (378), Expect = 3e-36 Identities = 72/160 (45%), Positives = 101/160 (63%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V+ P+ HPEKF K G+ P KGVL YGPPG GKTLLA+A+AN A FI + G EL+ Sbjct: 180 MREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 239 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VRE+F AR C++FFDE+D+I + +++ ++ Sbjct: 240 QKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQL 299 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG +A+ + ++ ATNRPD +DPALLRPGRLD+ + LP Sbjct: 300 DGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
>PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 150 bits (378), Expect = 3e-36 Identities = 72/160 (45%), Positives = 101/160 (63%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V+ P+ HPEKF K G+ P KGVL YGPPG GKTLLA+A+AN A FI + G EL+ Sbjct: 180 MREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 239 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VRE+F AR C++FFDE+D+I + +++ ++ Sbjct: 240 QKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQL 299 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG +A+ + ++ ATNRPD +DPALLRPGRLD+ + LP Sbjct: 300 DGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
>PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory particle triple-A ATPase subunit 1a) Length = 426 Score = 150 bits (378), Expect = 3e-36 Identities = 72/160 (45%), Positives = 101/160 (63%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V+ P+ HPEKF K G+ P KGVL YGPPG GKTLLA+A+AN A FI + G EL+ Sbjct: 180 MREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 239 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VRE+F AR C++FFDE+D+I + +++ ++ Sbjct: 240 QKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQL 299 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG +A+ + ++ ATNRPD +DPALLRPGRLD+ + LP Sbjct: 300 DGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)| Length = 611 Score = 149 bits (377), Expect = 3e-36 Identities = 70/160 (43%), Positives = 102/160 (63%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 + E V+Y ++ P +F+K G KG+L GPPG GKTLLAKAIA E + F +I G + + Sbjct: 164 VSELVEY-LKEPSRFQKLGGKIPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFV 222 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M+ G + VR++F+ +R SAPC++F DE+D++ Q LNQ+L EM Sbjct: 223 EMFVGVGASRVRDMFEHSRKSAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEM 282 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + + + +I ATNRPD++DPALLRPGR D+ + + LP Sbjct: 283 DGFDGNEGIILIAATNRPDVLDPALLRPGRFDRQVIVALP 322
>PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (SUG1 protein)| (CIM3 protein) (TAT-binding protein TBY1) Length = 405 Score = 149 bits (376), Expect = 4e-36 Identities = 72/160 (45%), Positives = 99/160 (61%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E ++ PV+HPE FE G++ KGV+ YGPPG GKTLLA+A+A+ FI + G EL+ Sbjct: 160 IKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELV 219 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VRE+F AR AP ++F DE+DSI + + +LL ++ Sbjct: 220 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQL 279 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG K + II ATNR DI+DPALLRPGR+D+ I P P Sbjct: 280 DGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPP 319
>PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B| Length = 414 Score = 149 bits (376), Expect = 4e-36 Identities = 72/165 (43%), Positives = 103/165 (62%) Frame = +3 Query: 15 MSNGXLQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 194 M ++E V+ P+ H E +++ G+ P +GVL YGPPGCGKT+LAKA+A A+FI + Sbjct: 168 MQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANTAASFIRVV 227 Query: 195 GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 374 G E + + GE VR++F A+ ++P ++F DE+D+IAT+ L + Sbjct: 228 GSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLE 287 Query: 375 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 LL +MDG + V +I ATNR D +DPALLRPGRLD+ I PLP Sbjct: 288 LLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLP 332
>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase domain protein 44) (CADp44) Length = 389 Score = 149 bits (375), Expect = 6e-36 Identities = 70/160 (43%), Positives = 102/160 (63%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+E ++ P+ +PE F++ G+ P KG L YGPPG GKTLLA+A+A++ NF+ + ++ Sbjct: 145 LREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIV 204 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GES +RE+F+ AR PC++F DE+D+I + L +LL +M Sbjct: 205 DKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQM 264 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + V +I ATNRPD +DPALLRPGRLD+ I+I LP Sbjct: 265 DGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLP 304
>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 149 bits (375), Expect = 6e-36 Identities = 70/160 (43%), Positives = 102/160 (63%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+E ++ P+ +PE F++ G+ P KG L YGPPG GKTLLA+A+A++ NF+ + ++ Sbjct: 145 LREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIV 204 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GES +RE+F+ AR PC++F DE+D+I + L +LL +M Sbjct: 205 DKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQM 264 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + V +I ATNRPD +DPALLRPGRLD+ I+I LP Sbjct: 265 DGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLP 304
>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 149 bits (375), Expect = 6e-36 Identities = 70/160 (43%), Positives = 102/160 (63%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+E ++ P+ +PE F++ G+ P KG L YGPPG GKTLLA+A+A++ NF+ + ++ Sbjct: 145 LREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIV 204 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GES +RE+F+ AR PC++F DE+D+I + L +LL +M Sbjct: 205 DKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQM 264 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + V +I ATNRPD +DPALLRPGRLD+ I+I LP Sbjct: 265 DGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLP 304
>PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-binding protein 7)| (TBP-7) Length = 418 Score = 148 bits (374), Expect = 7e-36 Identities = 72/160 (45%), Positives = 102/160 (63%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V+ P+ H E +++ G+ P +GVL YGPPGCGKT+LAKA+A+ A FI + G E + Sbjct: 177 VREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFV 236 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VR++F A+ +AP ++F DE+D+IAT+ L +LL +M Sbjct: 237 QKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQM 296 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + V +I ATNR D +DPALLRPGRLD+ I PLP Sbjct: 297 DGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 336
>PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) (CIP21) Length = 418 Score = 148 bits (374), Expect = 7e-36 Identities = 72/160 (45%), Positives = 102/160 (63%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V+ P+ H E +++ G+ P +GVL YGPPGCGKT+LAKA+A+ A FI + G E + Sbjct: 177 VREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFV 236 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VR++F A+ +AP ++F DE+D+IAT+ L +LL +M Sbjct: 237 QKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQM 296 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + V +I ATNR D +DPALLRPGRLD+ I PLP Sbjct: 297 DGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 336
>PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) Length = 418 Score = 148 bits (374), Expect = 7e-36 Identities = 72/160 (45%), Positives = 102/160 (63%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V+ P+ H E +++ G+ P +GVL YGPPGCGKT+LAKA+A+ A FI + G E + Sbjct: 177 VREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFV 236 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VR++F A+ +AP ++F DE+D+IAT+ L +LL +M Sbjct: 237 QKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQM 296 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + V +I ATNR D +DPALLRPGRLD+ I PLP Sbjct: 297 DGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 336
>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 148 bits (374), Expect = 7e-36 Identities = 70/158 (44%), Positives = 100/158 (63%) Frame = +3 Query: 36 ETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 215 E V+Y + P +F+K G KGVL GPPG GKTLLAKAIA E + F +I G + + M Sbjct: 166 ELVEY-LREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEM 224 Query: 216 WFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDG 395 + G + VR++F++A+ +APC++F DE+D++ Q LNQ+L EMDG Sbjct: 225 FVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDG 284 Query: 396 MNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 + + +I ATNRPD++DPALLRPGR D+ + + LP Sbjct: 285 FEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLP 322
>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 148 bits (374), Expect = 7e-36 Identities = 70/158 (44%), Positives = 100/158 (63%) Frame = +3 Query: 36 ETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 215 E V+Y + P +F+K G KGVL GPPG GKTLLAKAIA E + F +I G + + M Sbjct: 166 ELVEY-LREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEM 224 Query: 216 WFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDG 395 + G + VR++F++A+ +APC++F DE+D++ Q LNQ+L EMDG Sbjct: 225 FVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDG 284 Query: 396 MNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 + + +I ATNRPD++DPALLRPGR D+ + + LP Sbjct: 285 FEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLP 322
>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 148 bits (374), Expect = 7e-36 Identities = 70/158 (44%), Positives = 100/158 (63%) Frame = +3 Query: 36 ETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 215 E V+Y + P +F+K G KGVL GPPG GKTLLAKAIA E + F +I G + + M Sbjct: 166 ELVEY-LREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEM 224 Query: 216 WFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDG 395 + G + VR++F++A+ +APC++F DE+D++ Q LNQ+L EMDG Sbjct: 225 FVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDG 284 Query: 396 MNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 + + +I ATNRPD++DPALLRPGR D+ + + LP Sbjct: 285 FEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLP 322
>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 148 bits (374), Expect = 7e-36 Identities = 70/158 (44%), Positives = 100/158 (63%) Frame = +3 Query: 36 ETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 215 E V+Y + P +F+K G KGVL GPPG GKTLLAKAIA E + F +I G + + M Sbjct: 166 ELVEY-LREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEM 224 Query: 216 WFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDG 395 + G + VR++F++A+ +APC++F DE+D++ Q LNQ+L EMDG Sbjct: 225 FVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDG 284 Query: 396 MNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 + + +I ATNRPD++DPALLRPGR D+ + + LP Sbjct: 285 FEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLP 322
>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 148 bits (374), Expect = 7e-36 Identities = 70/158 (44%), Positives = 100/158 (63%) Frame = +3 Query: 36 ETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 215 E V+Y + P +F+K G KGVL GPPG GKTLLAKAIA E + F +I G + + M Sbjct: 166 ELVEY-LREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEM 224 Query: 216 WFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDG 395 + G + VR++F++A+ +APC++F DE+D++ Q LNQ+L EMDG Sbjct: 225 FVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDG 284 Query: 396 MNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 + + +I ATNRPD++DPALLRPGR D+ + + LP Sbjct: 285 FEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLP 322
>PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 424 Score = 148 bits (373), Expect = 1e-35 Identities = 69/160 (43%), Positives = 101/160 (63%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L E + P+ H E+FEK G+ P KGVL YGPPG GKTL+A+A A + A F+ + GP+L+ Sbjct: 183 LVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLV 242 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M+ G+ VR+ F A+ APC++F DE+D+I T+ + +LL ++ Sbjct: 243 QMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQL 302 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG ++ + + +I ATNR DI+DPAL+R GRLD+ I P P Sbjct: 303 DGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHP 342
>PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 148 bits (373), Expect = 1e-35 Identities = 69/160 (43%), Positives = 104/160 (65%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E+V+ P+ HPE +E+ G+ P KGV+ YGPPG GKTLLAKA+AN+ A F+ + G EL+ Sbjct: 197 IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELI 256 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + G+ VRE+F A AP ++F DE+D+I T+ + +LL ++ Sbjct: 257 QKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQL 316 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG +++ V +I ATNR + +DPAL+RPGR+D+ I PLP Sbjct: 317 DGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 356
>PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 148 bits (373), Expect = 1e-35 Identities = 69/160 (43%), Positives = 104/160 (65%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E+V+ P+ HPE +E+ G+ P KGV+ YGPPG GKTLLAKA+AN+ A F+ + G EL+ Sbjct: 197 IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELI 256 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + G+ VRE+F A AP ++F DE+D+I T+ + +LL ++ Sbjct: 257 QKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQL 316 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG +++ V +I ATNR + +DPAL+RPGR+D+ I PLP Sbjct: 317 DGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 356
>PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 148 bits (373), Expect = 1e-35 Identities = 69/160 (43%), Positives = 104/160 (65%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E+V+ P+ HPE +E+ G+ P KGV+ YGPPG GKTLLAKA+AN+ A F+ + G EL+ Sbjct: 197 IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELI 256 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + G+ VRE+F A AP ++F DE+D+I T+ + +LL ++ Sbjct: 257 QKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQL 316 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG +++ V +I ATNR + +DPAL+RPGR+D+ I PLP Sbjct: 317 DGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 356
>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)| Length = 439 Score = 147 bits (372), Expect = 1e-35 Identities = 68/160 (42%), Positives = 104/160 (65%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E+V+ P+ HPE +E+ G+ P KGV+ YGPPG GKTLLAKA+AN+ A F+ + G EL+ Sbjct: 196 IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELI 255 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + G+ VRE+F A AP ++F DE+D++ T+ + +LL ++ Sbjct: 256 QKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQL 315 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG +++ V +I ATNR + +DPAL+RPGR+D+ I PLP Sbjct: 316 DGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 355
>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)| (Proteasomal cap subunit) Length = 437 Score = 147 bits (372), Expect = 1e-35 Identities = 74/160 (46%), Positives = 101/160 (63%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+E ++ P+++PE F++ G+ P KGVL YGPPG GKTLLAKA+A ANFI ++ Sbjct: 193 LREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASGIV 252 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GES +RE+F A+ PC++F DE+D+I + L +LLT+M Sbjct: 253 DKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQM 312 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + II ATNRPD +DPALLRPGRLD+ + IPLP Sbjct: 313 DGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLP 352
>PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog| Length = 387 Score = 147 bits (371), Expect = 2e-35 Identities = 73/160 (45%), Positives = 99/160 (61%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++ETV+ P+ + + + G+ P +GVL YGPPG GKT+L KA+AN +A FI + G E + Sbjct: 146 IKETVELPLLQSDLYRQIGIDPPQGVLLYGPPGTGKTMLVKAVANHTKATFIRVNGSEFV 205 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VR++F AR AP ++F DE+DSIAT+ L +LL +M Sbjct: 206 QKYLGEGPRMVRDVFRLAREKAPSIVFIDEVDSIATKRFDASTSADREVQRVLIELLNQM 265 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + V +I ATNR D IDPALLRPGRLD+ I PLP Sbjct: 266 DGFDPAANVKVIMATNRADTIDPALLRPGRLDRKIEFPLP 305
>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (Protein let1)| Length = 403 Score = 147 bits (371), Expect = 2e-35 Identities = 72/161 (44%), Positives = 101/161 (62%), Gaps = 1/161 (0%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E ++ PV+HPE FE G+ KG+L YGPPG GKTLLA+A+A+ FI + G EL+ Sbjct: 157 IKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELV 216 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSI-ATQXXXXXXXXXXXXXXXLNQLLTE 386 + GE VRE+F AR AP ++F DE+DSI +++ + +LL + Sbjct: 217 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQ 276 Query: 387 MDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 +DG A K + +I ATNR DI+DPALLRPGR+D+ I P P Sbjct: 277 LDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPP 317
>PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 147 bits (370), Expect = 2e-35 Identities = 72/160 (45%), Positives = 99/160 (61%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E ++ PV+HPE FE G++ KGVL YGPPG GKTLLA+A+A+ FI + G EL+ Sbjct: 161 IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELV 220 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VRE+F AR AP ++F DE+DSI + + +LL ++ Sbjct: 221 QKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQL 280 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG A K + +I ATNR DI+D ALLRPGR+D+ I P P Sbjct: 281 DGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPP 320
>PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (TAT-binding protein homolog 10) (TBP10) Length = 406 Score = 147 bits (370), Expect = 2e-35 Identities = 72/160 (45%), Positives = 99/160 (61%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E ++ PV+HPE FE G++ KGVL YGPPG GKTLLA+A+A+ FI + G EL+ Sbjct: 161 IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELV 220 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VRE+F AR AP ++F DE+DSI + + +LL ++ Sbjct: 221 QKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQL 280 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG A K + +I ATNR DI+D ALLRPGR+D+ I P P Sbjct: 281 DGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPP 320
>PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (mSUG1) Length = 406 Score = 147 bits (370), Expect = 2e-35 Identities = 72/160 (45%), Positives = 99/160 (61%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E ++ PV+HPE FE G++ KGVL YGPPG GKTLLA+A+A+ FI + G EL+ Sbjct: 161 IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELV 220 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VRE+F AR AP ++F DE+DSI + + +LL ++ Sbjct: 221 QKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQL 280 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG A K + +I ATNR DI+D ALLRPGR+D+ I P P Sbjct: 281 DGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPP 320
>PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 147 bits (370), Expect = 2e-35 Identities = 72/160 (45%), Positives = 99/160 (61%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E ++ PV+HPE FE G++ KGVL YGPPG GKTLLA+A+A+ FI + G EL+ Sbjct: 161 IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELV 220 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VRE+F AR AP ++F DE+DSI + + +LL ++ Sbjct: 221 QKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQL 280 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG A K + +I ATNR DI+D ALLRPGR+D+ I P P Sbjct: 281 DGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPP 320
>PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) Length = 406 Score = 147 bits (370), Expect = 2e-35 Identities = 72/160 (45%), Positives = 99/160 (61%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E ++ PV+HPE FE G++ KGVL YGPPG GKTLLA+A+A+ FI + G EL+ Sbjct: 161 IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELV 220 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VRE+F AR AP ++F DE+DSI + + +LL ++ Sbjct: 221 QKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQL 280 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG A K + +I ATNR DI+D ALLRPGR+D+ I P P Sbjct: 281 DGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPP 320
>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 627 Score = 147 bits (370), Expect = 2e-35 Identities = 74/160 (46%), Positives = 97/160 (60%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 LQE V + ++ PE+F G KGVL GPPG GKTLLAKAIA E F SI G E + Sbjct: 184 LQEVVTF-LKQPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFV 242 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M+ G + VR++F KA+ +APC++F DE+D++ Q LNQLLTEM Sbjct: 243 EMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEM 302 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + II ATNRPD++D AL+RPGR D+ + + P Sbjct: 303 DGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVDAP 342
>PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-binding protein| 6) (TBP-6) Length = 405 Score = 146 bits (369), Expect = 3e-35 Identities = 72/160 (45%), Positives = 98/160 (61%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L E + P+ H EKFE G+ P KGVL YGPPG GKTLLA+A A + +A F+ + GP+L+ Sbjct: 182 LVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLV 241 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M+ G+ VR+ F A+ AP ++F DELD+I T+ + +LL ++ Sbjct: 242 QMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQL 301 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG V +I ATNR DI+DPALLR GRLD+ I P+P Sbjct: 302 DGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 341
>PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding protein homolog SATA) Length = 439 Score = 146 bits (369), Expect = 3e-35 Identities = 72/160 (45%), Positives = 98/160 (61%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L E + P+ H EKFE G+ P KGVL YGPPG GKTLLA+A A + +A F+ + GP+L+ Sbjct: 198 LVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLV 257 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M+ G+ VR+ F A+ AP ++F DELD+I T+ + +LL ++ Sbjct: 258 QMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQL 317 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG V +I ATNR DI+DPALLR GRLD+ I P+P Sbjct: 318 DGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 357
>PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Proteasome subunit P50) Length = 439 Score = 146 bits (369), Expect = 3e-35 Identities = 72/160 (45%), Positives = 98/160 (61%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L E + P+ H EKFE G+ P KGVL YGPPG GKTLLA+A A + +A F+ + GP+L+ Sbjct: 198 LVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLV 257 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M+ G+ VR+ F A+ AP ++F DELD+I T+ + +LL ++ Sbjct: 258 QMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQL 317 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG V +I ATNR DI+DPALLR GRLD+ I P+P Sbjct: 318 DGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 357
>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 644 Score = 146 bits (369), Expect = 3e-35 Identities = 73/159 (45%), Positives = 98/159 (61%) Frame = +3 Query: 33 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 212 +E V + ++ P+K+ G KG+L GPPG GKTLLAKAIANE F S+ G E + Sbjct: 199 EEIVSF-LKEPDKYTIVGAKIPKGILLVGPPGTGKTLLAKAIANEADVPFFSVAGSEFVE 257 Query: 213 MWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMD 392 M+ G A VR++F KA +APC++F DE+D++ + LNQLLTEMD Sbjct: 258 MFIGIGAARVRDLFKKASENAPCIVFIDEIDAVGRERGAGVGGGNDEREQTLNQLLTEMD 317 Query: 393 GMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 G K V ++GATNR DI+D ALLRPGR D+ + + LP Sbjct: 318 GFKENKGVIVVGATNRADILDAALLRPGRFDRQVTVNLP 356
>PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 146 bits (369), Expect = 3e-35 Identities = 68/160 (42%), Positives = 103/160 (64%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E+V+ P+ HPE +E+ G+ P KGV+ YGPPG GKTLLAKA+AN+ A F+ + G EL+ Sbjct: 197 IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELI 256 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + G+ VRE+F A P ++F DE+D+I T+ + +LL ++ Sbjct: 257 QKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQL 316 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG +++ V +I ATNR + +DPAL+RPGR+D+ I PLP Sbjct: 317 DGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 356
>PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) Length = 442 Score = 146 bits (369), Expect = 3e-35 Identities = 72/160 (45%), Positives = 98/160 (61%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L E + P+ H EKFE G+ P KGVL YGPPG GKTLLA+A A + +A F+ + GP+L+ Sbjct: 201 LVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLV 260 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M+ G+ VR+ F A+ AP ++F DELD+I T+ + +LL ++ Sbjct: 261 QMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQL 320 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG V +I ATNR DI+DPALLR GRLD+ I P+P Sbjct: 321 DGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 360
>PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog (26S proteasome| AAA-ATPase subunit RPT3) (Regulatory particle triple-A ATPase subunit 3) Length = 408 Score = 146 bits (369), Expect = 3e-35 Identities = 72/160 (45%), Positives = 100/160 (62%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V+ P+ H E +++ G+ P +GVL YGPPG GKT+LAKA+AN A FI + G E + Sbjct: 167 IREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFV 226 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VR++F A+ +AP ++F DE+D+IAT L +LL +M Sbjct: 227 QKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQM 286 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + V +I ATNR D +DPALLRPGRLD+ I PLP Sbjct: 287 DGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 326
>PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Proteasome| regulatory subunit 1) Length = 411 Score = 146 bits (368), Expect = 4e-35 Identities = 69/160 (43%), Positives = 103/160 (64%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V+ P+ +PEKF+ G+ P GVL +GPPG GKT+LAKA+AN+ A+FI + G EL+ Sbjct: 164 VREAVEDPLVNPEKFDAVGVEPPSGVLLHGPPGTGKTMLAKAVANQTDASFIKMAGSELV 223 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VR++F+ A P ++F DE+D++A + + QLL+EM Sbjct: 224 RKFIGEGSRLVRDLFELAEQKDPAIIFIDEIDAVAAKRTDSKTSGDAEVQRTMMQLLSEM 283 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + + + II ATNR D++D A+LRPGR D+LI +P P Sbjct: 284 DGFDERGDIRIIAATNRFDMLDSAILRPGRFDRLIEVPNP 323
>PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase MS73)| Length = 415 Score = 146 bits (368), Expect = 4e-35 Identities = 70/160 (43%), Positives = 100/160 (62%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V+ P+ H E + + G+ P +GVL YGPPGCGKT+LA A+A+ A FI + G E + Sbjct: 174 IREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLANAVAHHTTAAFIRVVGSEFV 233 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VR++F A+ ++P ++F DE+D+IAT+ L +LL +M Sbjct: 234 QKYLGEGPRMVRDVFRLAKENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQM 293 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + V +I ATNR D +DPALLRPGRLD+ I PLP Sbjct: 294 DGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 333
>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 665 Score = 146 bits (368), Expect = 4e-35 Identities = 74/160 (46%), Positives = 97/160 (60%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 LQE V + ++ PEKF G +GVL GPPG GKTLLAKAIA E F SI G E + Sbjct: 223 LQEVVTF-LKQPEKFTAIGAKIPRGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFV 281 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M+ G + VR++F KA+ +APC++F DE+D++ Q LNQLLTEM Sbjct: 282 EMFVGVGASRVRDLFKKAKENAPCLVFIDEIDAVGRQRGVGYGGGNDEREQTLNQLLTEM 341 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + +I ATNRPD++D ALLRPGR D+ + + P Sbjct: 342 DGFEGNSGIIVIAATNRPDVLDLALLRPGRFDRQVTVDYP 381
>PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (TAT-binding| protein homolog) Length = 414 Score = 145 bits (366), Expect = 6e-35 Identities = 71/161 (44%), Positives = 102/161 (63%), Gaps = 1/161 (0%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E ++ P++HPE FE G++ KGV+ YGPPG GKTLLA+A+A+ FI + G EL+ Sbjct: 168 IKEVIELPIKHPELFESLGIAQPKGVIMYGPPGTGKTLLARAVAHHTDCTFIRVSGSELV 227 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSI-ATQXXXXXXXXXXXXXXXLNQLLTE 386 + GE VRE+F AR AP ++F DE+DSI +T+ + +LL + Sbjct: 228 QKYIGEGSKMVRELFVMAREHAPSIIFMDEIDSIGSTRTEGGKGGGDSEVQRTMLELLNQ 287 Query: 387 MDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 +DG + + + II ATNR DI+DPALLRPGR+D+ I P P Sbjct: 288 LDGFESTQNIKIIMATNRIDILDPALLRPGRIDRKIEFPNP 328
>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4| Length = 388 Score = 145 bits (366), Expect = 6e-35 Identities = 72/160 (45%), Positives = 99/160 (61%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+E ++ P+++PE F + G+ P KGVL YGPPG GKTLLA+A+A NF+ + ++ Sbjct: 144 LREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIV 203 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GES +RE+F A+ PCV+F DE+D+I + L +LL +M Sbjct: 204 DKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQM 263 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + II ATNRPD +DPALLRPGRLD+ I IPLP Sbjct: 264 DGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLP 303
>PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-binding protein| 10) (TBP-10) Length = 404 Score = 145 bits (365), Expect = 8e-35 Identities = 71/160 (44%), Positives = 97/160 (60%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L E + P+ H EKFE G+ P KGVL YGPPG GKTLLA+A A + +A F+ + GP+L+ Sbjct: 163 LVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLV 222 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M+ G+ VR+ F A+ AP ++F DELD+I + + +LL ++ Sbjct: 223 QMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRFDSEKAGDREVQRTMLELLNQL 282 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG V +I ATNR DI+DPALLR GRLD+ I P+P Sbjct: 283 DGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 322
>PRS6B_YEAST (P33298) 26S protease regulatory subunit 6B homolog (YNT1 protein)| (TAT-binding homolog 2) Length = 428 Score = 145 bits (365), Expect = 8e-35 Identities = 72/163 (44%), Positives = 100/163 (61%) Frame = +3 Query: 15 MSNGXLQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 194 M ++E V+ P+ + +E+ G+ P +GVL YGPPG GKT+L KA+AN +A FI + Sbjct: 179 MQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTKAAFIRVN 238 Query: 195 GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 374 G E + + GE VR++F AR +AP ++F DE+DSIAT+ L + Sbjct: 239 GSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQTGSDREVQRILIE 298 Query: 375 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIP 503 LLT+MDG + V +I ATNR D +DPALLRPGRLD+ I P Sbjct: 299 LLTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFP 341
>PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homolog) (xSUG1)| Length = 461 Score = 145 bits (365), Expect = 8e-35 Identities = 73/160 (45%), Positives = 100/160 (62%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E ++ PV+HPE FE G++ KGVL YGPPG GKTLLA+A+A+ FI + G EL+ Sbjct: 156 IKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELV 215 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VRE+F AR AP ++F DE+DSI ++ L +LL ++ Sbjct: 216 QKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSRLEGGSGGDSEVQRTML-ELLNQL 274 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG A K + +I ATNR DI+D ALLRPGR+D+ I P P Sbjct: 275 DGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPP 314
>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1) (LEMA-1) Length = 423 Score = 145 bits (365), Expect = 8e-35 Identities = 67/160 (41%), Positives = 100/160 (62%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L E + P+ H E+F+K G+ P KGVL YGPPG GKTL+A+A A + A F+ + GP+L+ Sbjct: 182 LVEAIVLPMTHQERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLV 241 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M+ G+ VR+ F A+ +PC++F DE+D+I T+ + +LL ++ Sbjct: 242 QMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQL 301 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG ++ + +I ATNR DI+DPAL+R GRLD+ I P P Sbjct: 302 DGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHP 341
>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome| regulatory particle ATPase-like protein 4) Length = 406 Score = 145 bits (365), Expect = 8e-35 Identities = 69/160 (43%), Positives = 103/160 (64%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+E V+ P+ +PE F++ G++P KG L +GPPG GKTLLA+A+A++ NF+ + ++ Sbjct: 162 LREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIV 221 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GES +RE+F+ AR PC++F DE+D+I + L +LL ++ Sbjct: 222 DKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQL 281 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG ++ V +I ATNRPD +DPALLRPGRLD+ I I LP Sbjct: 282 DGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLP 321
>TBP7_CAEEL (P54816) TAT-binding homolog 7| Length = 1242 Score = 144 bits (364), Expect = 1e-34 Identities = 74/165 (44%), Positives = 103/165 (62%), Gaps = 5/165 (3%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQAN-----FISIK 194 L+E V +P+ +PE FEKF ++P KGV+FYGPPG GKTL+A+A+ANEC+ F K Sbjct: 403 LKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANECRRGANKVAFFMRK 462 Query: 195 GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 374 G + L+ W GESE +R +FD+A P ++FFDE+D +A ++ Sbjct: 463 GADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAP---VRSSKQDQIHASIVST 519 Query: 375 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 LL MDG++ + V +IGATNR D +DPAL RPGR D+ + LP Sbjct: 520 LLALMDGLDGRGEVVVIGATNRLDTLDPALRRPGRFDRELRFSLP 564
>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome| regulatory subunit 2) Length = 407 Score = 144 bits (364), Expect = 1e-34 Identities = 71/160 (44%), Positives = 104/160 (65%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++ETV+ P++ P FE G++P GVL +GPPG GKTL+AKA+A++ A+FI + G EL+ Sbjct: 161 VRETVELPMKDPGLFETVGINPPSGVLLHGPPGTGKTLMAKAVASQTDASFIKMAGSELV 220 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VR++F AR P V+F DE+D+IA++ + QLL+EM Sbjct: 221 HKFIGEGAKLVRDLFQVARDHEPAVVFIDEIDAIASKRTDSKTSGDAEVQRTMMQLLSEM 280 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + + + II ATNR D++D A+LRPGR D+LI +P P Sbjct: 281 DGFDERGDIRIIAATNRFDMLDRAILRPGRFDRLIEVPHP 320
>PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 429 Score = 144 bits (364), Expect = 1e-34 Identities = 66/160 (41%), Positives = 101/160 (63%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L E + P+ H ++F+K G+ P KGVL YGPPG GKTL+A+A A + A F+ + GP+L+ Sbjct: 188 LVEAIVLPMTHKDRFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLV 247 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M+ G+ VR+ F A+ +PC++F DE+D+I T+ + +LL ++ Sbjct: 248 QMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQL 307 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG ++ + + +I ATNR DI+DPAL+R GRLD+ I P P Sbjct: 308 DGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHP 347
>PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog (TAT-binding| protein homolog 2) Length = 403 Score = 144 bits (364), Expect = 1e-34 Identities = 70/160 (43%), Positives = 100/160 (62%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V+ P+ H +++ G+ P +GVL YGPPG GKT+LAKA+A+ A FI + G E + Sbjct: 162 MREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFV 221 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VR++F AR ++P ++F DE+D+IAT+ L +LL +M Sbjct: 222 QKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILMELLNQM 281 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + V +I ATNR D +DPALLRPGRLD+ I PLP Sbjct: 282 DGFDVSVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLP 321
>PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog| Length = 413 Score = 144 bits (364), Expect = 1e-34 Identities = 71/160 (44%), Positives = 100/160 (62%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V+ P+ H E +++ G+ P +GVL YGPPG GKT+LAKA+A+ A FI + G E + Sbjct: 172 IREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTTAAFIRVVGSEFV 231 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VR++F A+ +AP ++F DE+D+IAT L +LL +M Sbjct: 232 QKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQM 291 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + V +I ATNR D +DPALLRPGRLD+ I PLP Sbjct: 292 DGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 331
>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)| Length = 603 Score = 144 bits (363), Expect = 1e-34 Identities = 75/160 (46%), Positives = 97/160 (60%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L E V + +++P KF G S KGVL GPPG GKTLLAKAIA E F SI G E + Sbjct: 166 LAEVVAF-LKNPSKFLAVGASIPKGVLLVGPPGTGKTLLAKAIAGEASVPFFSISGSEFV 224 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M+ G + VR++F KA+ +APC++F DE+D++ Q LNQLLTEM Sbjct: 225 EMFVGVGASRVRDLFKKAKQNAPCLVFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEM 284 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG V +I ATNR D++D ALLRPGR D+ I + +P Sbjct: 285 DGFEGNTGVIVIAATNRVDVLDAALLRPGRFDRQIMVSMP 324
>PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 419 Score = 144 bits (363), Expect = 1e-34 Identities = 68/160 (42%), Positives = 100/160 (62%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L E + P+ H E+FEK G+ P KGVL YGPPG GKTL+A+A A + A F+ + GP+L+ Sbjct: 178 LVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLV 237 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M+ G+ VR+ F A+ +PC++F DE+D+I T+ + +LL ++ Sbjct: 238 QMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQL 297 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG ++ + +I ATNR DI+DPAL+R GRLD+ I P P Sbjct: 298 DGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHP 337
>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 433 Score = 144 bits (363), Expect = 1e-34 Identities = 69/160 (43%), Positives = 99/160 (61%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+E V+ P+ HPE+F G+ P KGVL +GPPG GKTL A+A+AN A FI + G EL+ Sbjct: 187 LREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELV 246 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VRE+F+ AR C++FFDE+D+I + +L+ ++ Sbjct: 247 QKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQL 306 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + + + ++ ATNRPD +DPAL+RPGRLD+ I LP Sbjct: 307 DGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 346
>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 144 bits (363), Expect = 1e-34 Identities = 69/160 (43%), Positives = 99/160 (61%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+E V+ P+ HPE+F G+ P KGVL +GPPG GKTL A+A+AN A FI + G EL+ Sbjct: 186 LREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELV 245 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VRE+F+ AR C++FFDE+D+I + +L+ ++ Sbjct: 246 QKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQL 305 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + + + ++ ATNRPD +DPAL+RPGRLD+ I LP Sbjct: 306 DGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 345
>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 144 bits (363), Expect = 1e-34 Identities = 69/160 (43%), Positives = 99/160 (61%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+E V+ P+ HPE+F G+ P KGVL +GPPG GKTL A+A+AN A FI + G EL+ Sbjct: 186 LREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELV 245 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VRE+F+ AR C++FFDE+D+I + +L+ ++ Sbjct: 246 QKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQL 305 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + + + ++ ATNRPD +DPAL+RPGRLD+ I LP Sbjct: 306 DGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 345
>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 144 bits (363), Expect = 1e-34 Identities = 69/160 (43%), Positives = 99/160 (61%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+E V+ P+ HPE+F G+ P KGVL +GPPG GKTL A+A+AN A FI + G EL+ Sbjct: 186 LREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELV 245 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VRE+F+ AR C++FFDE+D+I + +L+ ++ Sbjct: 246 QKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQL 305 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + + + ++ ATNRPD +DPAL+RPGRLD+ I LP Sbjct: 306 DGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 345
>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 628 Score = 144 bits (362), Expect = 2e-34 Identities = 74/159 (46%), Positives = 95/159 (59%) Frame = +3 Query: 33 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 212 QE V + ++ PE F G KGVL GPPG GKTLLAKAIA E F SI G E + Sbjct: 186 QEVVTF-LKQPESFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVE 244 Query: 213 MWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMD 392 M+ G + VR++F KA+ +APC++F DE+D++ Q LNQLLTEMD Sbjct: 245 MFVGVGASRVRDLFKKAKDNAPCIVFIDEIDAVGRQRGTGVGGGNDEREQTLNQLLTEMD 304 Query: 393 GMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 G V +I ATNR DI+D ALLRPGR D+ + + +P Sbjct: 305 GFEGNTGVIVIAATNRADILDSALLRPGRFDRQVSVDVP 343
>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 614 Score = 144 bits (362), Expect = 2e-34 Identities = 75/160 (46%), Positives = 97/160 (60%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 LQE V + ++ KF G + KGVL GPPG GKTLLAKAIA E A F SI G E + Sbjct: 183 LQEIVAF-LKDSRKFTNVGATIPKGVLLVGPPGTGKTLLAKAIAGEASAPFFSISGSEFV 241 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M+ G + VR++F KA+ APC++F DE+D++ Q LNQLLTEM Sbjct: 242 EMFVGVGASRVRDLFKKAKEKAPCIVFIDEIDAVGRQRGVGIGGGNDEREQTLNQLLTEM 301 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + V ++ ATNR D++D ALLRPGR D+ I + LP Sbjct: 302 DGFSGDTGVIVVAATNRIDVLDSALLRPGRFDRQIMVSLP 341
>TBP7_YEAST (P40340) TAT-binding homolog 7| Length = 1379 Score = 144 bits (362), Expect = 2e-34 Identities = 70/165 (42%), Positives = 104/165 (63%), Gaps = 5/165 (3%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQAN-----FISIK 194 L+E V P+ +PE ++ F ++P +GVLF+GPPG GKTL+A+A+A C ++ F K Sbjct: 425 LKEMVALPLLYPELYQNFNITPPRGVLFHGPPGTGKTLMARALAASCSSDERKITFFMRK 484 Query: 195 GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 374 G ++L+ W GE+E +R +F++A+ P ++FFDE+D +A ++ Sbjct: 485 GADILSKWVGEAERQLRLLFEEAKKHQPSIIFFDEIDGLAP---VRSSKQEQIHASIVST 541 Query: 375 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 LL MDGM+ + V +IGATNRPD +DPAL RPGR D+ Y PLP Sbjct: 542 LLALMDGMDNRGQVIVIGATNRPDAVDPALRRPGRFDREFYFPLP 586
>PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-binding protein| homolog 10) (Fragment) Length = 389 Score = 144 bits (362), Expect = 2e-34 Identities = 69/161 (42%), Positives = 101/161 (62%), Gaps = 1/161 (0%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E ++ P++HPE FE G++ KGVL YGPPG GKTLLA+A+A+ FI + G EL+ Sbjct: 143 IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELV 202 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSI-ATQXXXXXXXXXXXXXXXLNQLLTE 386 + GE VRE+F AR AP ++F DE+DSI +++ + +LL + Sbjct: 203 QKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQ 262 Query: 387 MDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 +DG + K + ++ TNR DI+DPALLRPGR+D+ I P P Sbjct: 263 LDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNP 303
>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 679 Score = 143 bits (361), Expect = 2e-34 Identities = 72/160 (45%), Positives = 98/160 (61%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L E V++ ++ P KF G KGVL GPPG GKTLLA+A+A E F SI G + + Sbjct: 178 LVEVVEF-LKDPRKFSAIGARIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFV 236 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M+ G + VR++F+ A+ +APC++F DE+D++ Q LNQLL EM Sbjct: 237 EMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEM 296 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG +A + + II ATNR DI+DPALLRPGR D+ I + P Sbjct: 297 DGFSANEGIIIIAATNRADILDPALLRPGRFDRQIQVNRP 336
>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7| Length = 435 Score = 143 bits (361), Expect = 2e-34 Identities = 67/160 (41%), Positives = 99/160 (61%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+E V+ P+ HPE++ G+ P KGVL YGPPG GKTL A+A+AN A FI + G EL+ Sbjct: 189 LREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELV 248 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VRE+F+ AR C++FFDE+D++ + +L+ ++ Sbjct: 249 QKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQRTMLELINQL 308 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + + + ++ ATNRPD +DPAL+RPGRLD+ + LP Sbjct: 309 DGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALP 348
>PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4| Length = 443 Score = 143 bits (361), Expect = 2e-34 Identities = 67/160 (41%), Positives = 103/160 (64%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V+ P+ HPE +E+ G+ P KGV+ YG PG GKTLLAKA+AN+ A F+ I G EL+ Sbjct: 200 IKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQTSATFLRIVGSELI 259 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + G+ VRE+F A +AP ++F DE+D++ T+ + +LL ++ Sbjct: 260 QKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQL 319 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG +++ V ++ ATNR + +DPAL+RPGR+D+ I PLP Sbjct: 320 DGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLP 359
>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)| (TAT-binding homolog 3) Length = 467 Score = 143 bits (360), Expect = 3e-34 Identities = 66/160 (41%), Positives = 99/160 (61%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+E V+ P+ PE+F G+ P KG+L YGPPG GKTL A+A+AN A FI + G EL+ Sbjct: 221 LREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELV 280 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VRE+F+ AR C++FFDE+D++ + +L+T++ Sbjct: 281 QKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQL 340 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + + + ++ ATNRP+ +DPALLRPGR+D+ + LP Sbjct: 341 DGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLP 380
>PRS6B_SCHPO (O74894) 26S protease regulatory subunit 6B homolog| Length = 389 Score = 143 bits (360), Expect = 3e-34 Identities = 70/158 (44%), Positives = 98/158 (62%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V+ P+ + + + G+ P +GVL YGPPG GKT+L KA+AN ANFI + G E + Sbjct: 146 VREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTAANFIRVVGSEFV 205 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VR++F AR +AP ++F DE+D+IAT+ L +LLT+M Sbjct: 206 QKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKRFDAQTGADREVQRILIELLTQM 265 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIP 503 DG + V +I ATNR D +DPALLRPGRLD+ I P Sbjct: 266 DGFDQGANVKVIMATNRADTLDPALLRPGRLDRKIEFP 303
>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like| protein) Length = 797 Score = 143 bits (360), Expect = 3e-34 Identities = 70/152 (46%), Positives = 93/152 (61%) Frame = +3 Query: 54 VEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE 233 +++P++++ G KG + GPPG GKTLLAKA A E FI++ G E L M+ G Sbjct: 327 LKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGP 386 Query: 234 ANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKKT 413 A VR++F AR +APC+LF DE+D++ + LNQLL EMDG N Sbjct: 387 ARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTN 446 Query: 414 VFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 V I+ TNRPDI+DPALLRPGR D+ I+I P Sbjct: 447 VVILAGTNRPDILDPALLRPGRFDRQIFIGPP 478
>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)| Length = 802 Score = 143 bits (360), Expect = 3e-34 Identities = 70/152 (46%), Positives = 93/152 (61%) Frame = +3 Query: 54 VEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE 233 +++P++++ G KG + GPPG GKTLLAKA A E FI++ G E L M+ G Sbjct: 326 LKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGP 385 Query: 234 ANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKKT 413 A VR++F AR +APC+LF DE+D++ + LNQLL EMDG N Sbjct: 386 ARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTN 445 Query: 414 VFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 V I+ TNRPDI+DPALLRPGR D+ I+I P Sbjct: 446 VVILAGTNRPDILDPALLRPGRFDRQIFIGPP 477
>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 142 bits (359), Expect = 4e-34 Identities = 73/160 (45%), Positives = 98/160 (61%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L E V++ ++ P KF + G KGVL GPPG GKTLLAKA A E F SI G + + Sbjct: 173 LVEVVEF-LKDPRKFAELGARIPKGVLLVGPPGTGKTLLAKACAGEAGVPFFSISGSDFV 231 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M+ G + VR++F+ A+ +APC++F DE+D++ Q LNQLL EM Sbjct: 232 EMFVGVGASRVRDLFENAKKNAPCLIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEM 291 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG +A + + II ATNR DI+DPALLRPGR D+ I + P Sbjct: 292 DGFSANEGIIIIAATNRADILDPALLRPGRFDRQITVDRP 331
>Y2139_MYCBO (P63346) Putative AAA-family ATPase Mb2139c| Length = 609 Score = 142 bits (359), Expect = 4e-34 Identities = 77/179 (43%), Positives = 108/179 (60%), Gaps = 19/179 (10%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN--------------- 164 +++ V+ P H E + ++ + P KGVL YGPPGCGKTL+AKA+AN Sbjct: 264 IRDAVELPFLHKELYREYSLRPPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAH 323 Query: 165 ECQANFISIKGPELLTMWFGESEANVREIFDKARGSA----PCVLFFDELDSIATQXXXX 332 E ++ F++IKGPELL + GE+E ++R IF +AR A P ++FFDE+DSI Sbjct: 324 EAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSIF--RTRG 381 Query: 333 XXXXXXXXXXXLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 + QLL+E+DG+ + V +IGA+NR D+IDPA+LRPGRLD I I P Sbjct: 382 TGVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERP 440
>Y2115_MYCTU (P63345) Putative AAA-family ATPase Rv2115c/MT2175| Length = 609 Score = 142 bits (359), Expect = 4e-34 Identities = 77/179 (43%), Positives = 108/179 (60%), Gaps = 19/179 (10%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN--------------- 164 +++ V+ P H E + ++ + P KGVL YGPPGCGKTL+AKA+AN Sbjct: 264 IRDAVELPFLHKELYREYSLRPPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAH 323 Query: 165 ECQANFISIKGPELLTMWFGESEANVREIFDKARGSA----PCVLFFDELDSIATQXXXX 332 E ++ F++IKGPELL + GE+E ++R IF +AR A P ++FFDE+DSI Sbjct: 324 EAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSIF--RTRG 381 Query: 333 XXXXXXXXXXXLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 + QLL+E+DG+ + V +IGA+NR D+IDPA+LRPGRLD I I P Sbjct: 382 TGVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERP 440
>Y1316_MYCLE (P46509) Putative AAA-family ATPase ML1316| Length = 609 Score = 142 bits (359), Expect = 4e-34 Identities = 77/179 (43%), Positives = 108/179 (60%), Gaps = 19/179 (10%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN--------------- 164 +++ V+ P H E + ++ + P KGVL YGPPGCGKTL+AKA+AN Sbjct: 264 IRDAVELPFLHKELYREYALRPPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAR 323 Query: 165 ECQANFISIKGPELLTMWFGESEANVREIFDKARGSA----PCVLFFDELDSIATQXXXX 332 E ++ F++IKGPELL + GE+E ++R IF +AR A P ++FFDE+DSI Sbjct: 324 EAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSIF--RTRG 381 Query: 333 XXXXXXXXXXXLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 + QLL+E+DG+ + V +IGA+NR D+IDPA+LRPGRLD I I P Sbjct: 382 TGVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERP 440
>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 142 bits (357), Expect = 7e-34 Identities = 66/152 (43%), Positives = 96/152 (63%) Frame = +3 Query: 54 VEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE 233 +++P +++ G KGVL YGPPG GKTLLA+A+A E F +I G + + M+ G Sbjct: 182 LQNPSRYQALGAKIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGA 241 Query: 234 ANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKKT 413 + VR++F++A+ ++PC++F DE+D++ Q LNQLL EMDG + Sbjct: 242 SRVRDLFEQAKQNSPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAG 301 Query: 414 VFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 V +I ATNRPDI+DPALLRPGR D+ I + P Sbjct: 302 VILIAATNRPDILDPALLRPGRFDRQIPVSNP 333
>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 142 bits (357), Expect = 7e-34 Identities = 66/152 (43%), Positives = 96/152 (63%) Frame = +3 Query: 54 VEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE 233 +++P +++ G KGVL YGPPG GKTLLA+A+A E F +I G + + M+ G Sbjct: 182 LQNPSRYQALGAKIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGA 241 Query: 234 ANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKKT 413 + VR++F++A+ ++PC++F DE+D++ Q LNQLL EMDG + Sbjct: 242 SRVRDLFEQAKQNSPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAG 301 Query: 414 VFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 V +I ATNRPDI+DPALLRPGR D+ I + P Sbjct: 302 VILIAATNRPDILDPALLRPGRFDRQIPVSNP 333
>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)| Length = 616 Score = 142 bits (357), Expect = 7e-34 Identities = 68/160 (42%), Positives = 98/160 (61%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L E V + +++ ++F + G KGVL GPPG GKTLLAKA+A E F SI G E + Sbjct: 173 LTEVVDF-LKNADRFTELGAKIPKGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSEFV 231 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M+ G + VR++F++A+ +APC++F DE+D++ Q LNQLLTEM Sbjct: 232 EMFVGVGASRVRDLFEQAKANAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLTEM 291 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + I+ ATNRPD++D AL+RPGR D+ + + P Sbjct: 292 DGFEGNTGIIIVAATNRPDVLDSALMRPGRFDRQVVVDRP 331
>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)| Length = 795 Score = 142 bits (357), Expect = 7e-34 Identities = 71/161 (44%), Positives = 100/161 (62%), Gaps = 1/161 (0%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V Y ++ PE+F + G KG L GPPGCGKTLLAKA+A E Q F+++ GPE + Sbjct: 321 VREFVDY-LKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFV 379 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIA-TQXXXXXXXXXXXXXXXLNQLLTE 386 + G A VR +F +AR APC+++ DE+D++ + LNQLL E Sbjct: 380 EVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTTMSGFSNTEEEQTLNQLLVE 439 Query: 387 MDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 MDGM V ++ +TNR DI+D AL+RPGRLD+ ++I LP Sbjct: 440 MDGMGTTDHVIVLASTNRADILDGALMRPGRLDRHVFIDLP 480
>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)| Length = 663 Score = 142 bits (357), Expect = 7e-34 Identities = 69/152 (45%), Positives = 92/152 (60%) Frame = +3 Query: 54 VEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE 233 +++P++++ G KG + GPPG GKTLLAKA A E FI++ G E L M+ G Sbjct: 193 LKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGP 252 Query: 234 ANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKKT 413 A VR++F AR APC+LF DE+D+I + LNQ+L EMDG N+ Sbjct: 253 ARVRDMFAMARKHAPCILFIDEIDAIGRKRGRGHLGGQSEQENTLNQMLVEMDGFNSSTN 312 Query: 414 VFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 V ++ TNRPDI+DPAL RPGR D+ IYI P Sbjct: 313 VVVLAGTNRPDILDPALTRPGRFDRQIYIGPP 344
>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 787 Score = 142 bits (357), Expect = 7e-34 Identities = 67/152 (44%), Positives = 96/152 (63%) Frame = +3 Query: 54 VEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE 233 +++P +++ G KGVL YGPPG GKTLLA+A+A E F +I G + + M+ G Sbjct: 182 LQNPCRYQTLGAKIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGA 241 Query: 234 ANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKKT 413 + VR++FD+A+ ++PC++F DE+D++ Q LNQLL EMDG + Sbjct: 242 SRVRDLFDQAKQNSPCIIFVDEIDAVGRQRGTGLGGGHDEREQTLNQLLVEMDGFGDRAG 301 Query: 414 VFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 V +I ATNRPDI+DPALLRPGR D+ I + P Sbjct: 302 VILIAATNRPDILDPALLRPGRFDRQIPVSNP 333
>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 635 Score = 141 bits (355), Expect = 1e-33 Identities = 65/149 (43%), Positives = 93/149 (62%) Frame = +3 Query: 63 PEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANV 242 P KF+ G KG+L GPPG GKTLLA+AIA E + F +I G + + M+ G + V Sbjct: 173 PNKFQNLGGKIPKGILMVGPPGTGKTLLARAIAGEAKVPFFTISGSDFVEMFVGVGASRV 232 Query: 243 REIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKKTVFI 422 R++F++A+ +APC++F DE+D++ Q LNQ+L EMDG + V + Sbjct: 233 RDMFEQAKKNAPCLIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFSGNDGVIV 292 Query: 423 IGATNRPDIIDPALLRPGRLDQLIYIPLP 509 I ATNRPD++DPAL RPGR D+ + + LP Sbjct: 293 IAATNRPDVLDPALTRPGRFDRQVVVGLP 321
>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 631 Score = 141 bits (355), Expect = 1e-33 Identities = 71/159 (44%), Positives = 96/159 (60%) Frame = +3 Query: 33 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 212 +E V + ++ PE+F G KGVL GPPG GKTLLAKAIA E F SI G E + Sbjct: 186 EEVVSF-LKKPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVE 244 Query: 213 MWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMD 392 M+ G + VR++F KA+ ++PC++F DE+D++ Q LNQLLTEMD Sbjct: 245 MFVGVGASRVRDLFKKAKENSPCIVFIDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMD 304 Query: 393 GMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 G + II ATNR D++D ALLRPGR D+ + + +P Sbjct: 305 GFEGNTGIIIIAATNRVDVLDAALLRPGRFDRQVTVDVP 343
>ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2| Length = 1040 Score = 141 bits (355), Expect = 1e-33 Identities = 73/165 (44%), Positives = 101/165 (61%), Gaps = 5/165 (3%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC-----QANFISIK 194 L+E V +P+ +PE FEKF + P +G LFYGPPG GKTL+A+A+ANEC + F K Sbjct: 93 LKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSRGDKRVAFFMRK 152 Query: 195 GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 374 G + L+ W GESE +R +FD+A P ++FFDE+D +A ++ Sbjct: 153 GADCLSKWVGESERQLRLLFDQAYQMRPAIIFFDEIDGLAP---VRSSRQDQIHSSIVST 209 Query: 375 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 LL MDG++++ + +IGATNR D IDPAL RPGR D+ LP Sbjct: 210 LLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSLP 254
>ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2| Length = 1091 Score = 141 bits (355), Expect = 1e-33 Identities = 73/165 (44%), Positives = 101/165 (61%), Gaps = 5/165 (3%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC-----QANFISIK 194 L+E V +P+ +PE FEKF + P +G LFYGPPG GKTL+A+A+ANEC + F K Sbjct: 269 LKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQGDKRVAFFMRK 328 Query: 195 GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 374 G + L+ W GESE +R +FD+A P ++FFDE+D +A ++ Sbjct: 329 GADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLAP---VRSSRQDQIHSSIVST 385 Query: 375 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 LL MDG++++ + +IGATNR D IDPAL RPGR D+ LP Sbjct: 386 LLALMDGLDSRGEIVVIGATNRLDAIDPALRRPGRFDREFLFSLP 430
>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog| Length = 438 Score = 140 bits (354), Expect = 2e-33 Identities = 65/160 (40%), Positives = 99/160 (61%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+E V+ P+ PE+F K G+ P KG++ YGPPG GKTL A+A+AN A FI + G EL+ Sbjct: 191 LREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCARAVANRTDATFIRVIGSELV 250 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + GE VRE+F+ AR C++FFDE+D+I + +L+T++ Sbjct: 251 QKYVGEGARMVRELFEMARTKKACIIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQL 310 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + + + ++ ATNRP+ +D AL+RPGR+D+ + LP Sbjct: 311 DGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLP 350
>ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2| Length = 1390 Score = 140 bits (354), Expect = 2e-33 Identities = 73/165 (44%), Positives = 101/165 (61%), Gaps = 5/165 (3%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC-----QANFISIK 194 L+E V +P+ +PE FEKF + P +G LFYGPPG GKTL+A+A+ANEC + F K Sbjct: 438 LKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQGDKRVAFFMRK 497 Query: 195 GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 374 G + L+ W GESE +R +FD+A P ++FFDE+D +A ++ Sbjct: 498 GADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLAP---VRSSRQDQIHSSIVST 554 Query: 375 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 LL MDG++++ + +IGATNR D IDPAL RPGR D+ LP Sbjct: 555 LLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSLP 599
>PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog| Length = 423 Score = 140 bits (353), Expect = 2e-33 Identities = 68/163 (41%), Positives = 98/163 (60%) Frame = +3 Query: 15 MSNGXLQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 194 M ++E V+ P+ + +++ G+ P +GVL YGPPG GKT+L KA+AN A+FI + Sbjct: 173 MQKQEIREAVELPLTQFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRVN 232 Query: 195 GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 374 G E + + GE VR++F AR ++P ++F DE+D+IAT+ L + Sbjct: 233 GSEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLE 292 Query: 375 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIP 503 LL +MDG V +I ATNR D +DPALLRPGRLD+ I P Sbjct: 293 LLNQMDGFEQSSNVKVIMATNRADTLDPALLRPGRLDRKIEFP 335
>PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (TAT-binding| protein homolog 2) Length = 448 Score = 140 bits (352), Expect = 3e-33 Identities = 67/160 (41%), Positives = 100/160 (62%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V+ P+ HPE +E G+ P KGV+ YG PG GKTLLAKA+AN A F+ + G EL+ Sbjct: 205 IKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELI 264 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + G+ VRE+F A +P ++F DE+D++ T+ + +LL ++ Sbjct: 265 QKYLGDGPKLVRELFRVADELSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQL 324 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG +++ V +I ATNR + +DPALLRPGR+D+ I PLP Sbjct: 325 DGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLP 364
>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 139 bits (350), Expect = 4e-33 Identities = 71/160 (44%), Positives = 95/160 (59%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L E V + + P KF+K G KG L GPPG GKTLLAKAIA E F SI G + + Sbjct: 167 LTEIVDF-LRDPSKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGEANVPFFSISGSDFV 225 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M+ G + VR++F++ + +APC++F DE+D++ LNQ+L EM Sbjct: 226 EMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDAVGRHRGIGMGGGNDEREQTLNQMLVEM 285 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG A + V II ATNRPD++D ALLRPGR D+ I + P Sbjct: 286 DGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANP 325
>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 139 bits (350), Expect = 4e-33 Identities = 71/160 (44%), Positives = 95/160 (59%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L E V + + P KF+K G KG L GPPG GKTLLAKAIA E F SI G + + Sbjct: 167 LTEIVDF-LRDPSKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGEANVPFFSISGSDFV 225 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M+ G + VR++F++ + +APC++F DE+D++ LNQ+L EM Sbjct: 226 EMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDAVGRHRGIGMGGGNDEREQTLNQMLVEM 285 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG A + V II ATNRPD++D ALLRPGR D+ I + P Sbjct: 286 DGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANP 325
>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast| precursor (EC 3.4.24.-) Length = 716 Score = 139 bits (349), Expect = 6e-33 Identities = 66/160 (41%), Positives = 96/160 (60%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 LQE V + +++P+K+ G KG L GPPG GKTLLA+A+A E F S E + Sbjct: 274 LQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFV 332 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 ++ G + VR++F+KA+ APC++F DE+D++ Q +NQLLTEM Sbjct: 333 ELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEM 392 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + V ++ ATNRPD++D ALLRPGR D+ + + P Sbjct: 393 DGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRP 432
>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) Length = 706 Score = 139 bits (349), Expect = 6e-33 Identities = 66/160 (41%), Positives = 96/160 (60%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 LQE V + +++P+K+ G KG L GPPG GKTLLA+A+A E F S E + Sbjct: 265 LQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGTPFFSCAASEFV 323 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 ++ G + VR++F+KA+ APC++F DE+D++ Q +NQLLTEM Sbjct: 324 ELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTINQLLTEM 383 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + V ++ ATNRPD++D ALLRPGR D+ + + P Sbjct: 384 DGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRP 423
>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (DS9) Length = 714 Score = 139 bits (349), Expect = 6e-33 Identities = 66/160 (41%), Positives = 96/160 (60%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 LQE V + +++P+K+ G KG L GPPG GKTLLA+A+A E F S E + Sbjct: 265 LQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFV 323 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 ++ G + VR++F+KA+ APC++F DE+D++ Q +NQLLTEM Sbjct: 324 ELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEM 383 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + V ++ ATNRPD++D ALLRPGR D+ + + P Sbjct: 384 DGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRP 423
>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast| precursor (EC 3.4.24.-) Length = 704 Score = 139 bits (349), Expect = 6e-33 Identities = 66/160 (41%), Positives = 96/160 (60%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 LQE V + +++P+K+ G KG L GPPG GKTLLA+A+A E F S E + Sbjct: 262 LQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFV 320 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 ++ G + VR++F+KA+ APC++F DE+D++ Q +NQLLTEM Sbjct: 321 ELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEM 380 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + V ++ ATNRPD++D ALLRPGR D+ + + P Sbjct: 381 DGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRP 420
>PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (TAT-binding| homolog 5) Length = 437 Score = 135 bits (341), Expect = 5e-32 Identities = 65/160 (40%), Positives = 100/160 (62%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E+V+ P+ HPE +E+ G+ P KGV+ YG PG GKTLLAKA+AN+ A F+ I G EL+ Sbjct: 194 IKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELI 253 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + G+ R+IF A +AP ++F DE+D+I T+ + +LL ++ Sbjct: 254 QKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQL 313 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + + V +I ATN+ + +DPAL+RPGR+D+ I P Sbjct: 314 DGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENP 353
>PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-binding protein| homolog 1) (TBP-1) Length = 434 Score = 135 bits (339), Expect = 8e-32 Identities = 66/160 (41%), Positives = 96/160 (60%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L E + P++ +KF+ G+ KG L YGPPG GKTLLA+A A + A F+ + P+L+ Sbjct: 193 LVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLV 252 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M+ GE VR+ F A+ AP ++F DELD+I T+ + +LL ++ Sbjct: 253 QMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKSGDREVQRTMLELLNQL 312 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG ++ V ++ ATNR D++DPALLR GRLD+ I PLP Sbjct: 313 DGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLP 352
>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (Fragment) Length = 662 Score = 135 bits (339), Expect = 8e-32 Identities = 64/160 (40%), Positives = 94/160 (58%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 LQE V + +++P+K+ G KG L GPPG GKTLLA+A+A E F S E + Sbjct: 242 LQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFV 300 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 ++ G + VR +F+ A+ APC++F DE+D++ Q +NQLLTEM Sbjct: 301 ELFVGVGASRVRHLFENAKSKAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTINQLLTEM 360 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + V ++ ATNRPD++D ALLRPG+ D+ + + P Sbjct: 361 DGFSGNSGVIVLAATNRPDVLDSALLRPGKFDRQVTVDRP 400
>PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A| Length = 438 Score = 134 bits (338), Expect = 1e-31 Identities = 65/160 (40%), Positives = 96/160 (60%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L E + P++ +KF K G+ P KG L +GPPG GKTLLA+A A + A F+ + P+L+ Sbjct: 197 LFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLV 256 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M+ G+ VR+ F A+ +P ++F DELD+I T+ + +LL ++ Sbjct: 257 QMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQL 316 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG ++ V +I ATNR D +DPALLR GRLD+ + PLP Sbjct: 317 DGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLP 356
>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 134 bits (338), Expect = 1e-31 Identities = 67/160 (41%), Positives = 95/160 (59%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L E V++ ++ P++F K G GVL GPPG GKTLLAKA+A E F SI G + + Sbjct: 199 LVEVVEF-LKDPKRFTKLGARIPAGVLLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFV 257 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M+ G + VR +F+ A+ +AP ++F DE+D++ Q LNQLL EM Sbjct: 258 EMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDAVGRQRGVGLGGGNDEREQTLNQLLIEM 317 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + + +I ATNR D++DPALLRPGR D+ + + P Sbjct: 318 DGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRP 357
>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 134 bits (338), Expect = 1e-31 Identities = 67/160 (41%), Positives = 95/160 (59%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L E V++ ++ P++F K G GVL GPPG GKTLLAKA+A E F SI G + + Sbjct: 199 LVEVVEF-LKDPKRFTKLGARIPAGVLLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFV 257 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M+ G + VR +F+ A+ +AP ++F DE+D++ Q LNQLL EM Sbjct: 258 EMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDAVGRQRGVGLGGGNDEREQTLNQLLIEM 317 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + + +I ATNR D++DPALLRPGR D+ + + P Sbjct: 318 DGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRP 357
>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)| Length = 628 Score = 134 bits (338), Expect = 1e-31 Identities = 71/162 (43%), Positives = 98/162 (60%), Gaps = 2/162 (1%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L E V + ++ P+++ G KGVL GPPG GKTLLAKA A E F I G E + Sbjct: 186 LSEVVDF-LKFPQRYTALGAKIPKGVLLVGPPGTGKTLLAKAAAGEAGVPFFIISGSEFV 244 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIA-TQXXXXXXXXXXXXXXXLNQLLTE 386 ++ G A VR++F++A+ APC++F DELD+I ++ LNQLLTE Sbjct: 245 ELFVGAGAARVRDLFEQAKKQAPCIVFIDELDAIGKSRASGAFMGGNDEREQTLNQLLTE 304 Query: 387 MDGMNAK-KTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 MDG +A TV ++ ATNRP+ +DPALLRPGR D+ + + P Sbjct: 305 MDGFSAAGATVIVLAATNRPETLDPALLRPGRFDRQVLVDRP 346
>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 702 Score = 134 bits (337), Expect = 1e-31 Identities = 69/160 (43%), Positives = 95/160 (59%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L E V Y +++P K+ + G +GV+ YGPPG GKTLLAKA+A E F G Sbjct: 243 LLEIVDY-LKNPLKYAQMGARSPRGVILYGPPGTGKTLLAKAVAGEAGVPFFQSTGSGFE 301 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M G VR++F+KA+ +APC++F DE+DS+ ++ LNQLL EM Sbjct: 302 DMLVGVGAKRVRDLFNKAKKAAPCIIFIDEIDSVGSKRGRVELSSYSVVEQTLNQLLAEM 361 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG ++ V ++ ATNR D++D ALLRPGR D+ I I LP Sbjct: 362 DGFTSRTGVVVMAATNRLDVLDDALLRPGRFDRHIQINLP 401
>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 709 Score = 134 bits (337), Expect = 1e-31 Identities = 69/160 (43%), Positives = 95/160 (59%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L E V Y +++P K+ + G +GV+ YGPPG GKTLLAKA+A E F G Sbjct: 240 LLEIVDY-LKNPLKYAQMGARSPRGVILYGPPGTGKTLLAKAVAGEAGVPFFQSTGSGFE 298 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M G VR++F+KA+ +APC++F DE+DS+ ++ LNQLL EM Sbjct: 299 DMLVGVGAKRVRDLFNKAKKAAPCIIFIDEIDSVGSKRGRVELSSYSVVEQTLNQLLAEM 358 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG ++ V ++ ATNR D++D ALLRPGR D+ I I LP Sbjct: 359 DGFTSRTGVVVMAATNRLDVLDDALLRPGRFDRHIQINLP 398
>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 725 Score = 134 bits (337), Expect = 1e-31 Identities = 69/160 (43%), Positives = 94/160 (58%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 +QE V Y +++P+K+ G KG+L GPPG GKTLLAKA A E F I + Sbjct: 224 VQELVDY-LKNPKKYAAAGARFPKGILLGGPPGTGKTLLAKATAGEANVPFFFISASSFV 282 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 ++ G VRE+F +AR AP ++F DELD++ LNQ+L EM Sbjct: 283 ELYVGLGAKRVREMFKEARKLAPAIIFIDELDAVGRSRGSGIGGGNDEREQTLNQILVEM 342 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG+N + I+GATNR D++DPALLRPGR D++I + LP Sbjct: 343 DGINENAGILIMGATNRTDVLDPALLRPGRFDRIITVGLP 382
>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)| Length = 676 Score = 134 bits (336), Expect = 2e-31 Identities = 69/160 (43%), Positives = 95/160 (59%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V Y ++ PEK+ + G KGVL GPPG GKTLLA+AIA E Q F G E Sbjct: 213 VEEIVDY-LKDPEKYSRLGGRLPKGVLLVGPPGTGKTLLARAIAGEAQVPFFHTAGSEFD 271 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + G+ VR++FDKA+ APC++F DE+DS+ ++ +NQLL+EM Sbjct: 272 EVLVGQGARRVRDLFDKAKARAPCIIFIDEIDSVGSK--RVSNSIHPYANQTINQLLSEM 329 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + + +I ATNR D +D ALLRPGR D + +P P Sbjct: 330 DGFTRNEGIIVIAATNRVDDLDKALLRPGRFDVRVTVPKP 369
>PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (Protein mts2)| Length = 448 Score = 133 bits (335), Expect = 2e-31 Identities = 63/161 (39%), Positives = 101/161 (62%), Gaps = 1/161 (0%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 ++E V+ P+ HPE +E+ G+ P KGV+ YG PG GKTLLAKA+AN+ A F+ + G EL+ Sbjct: 203 IKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELI 262 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + G+ VR++F+ A +P ++F DE+D+I T+ + +LL ++ Sbjct: 263 QKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDAQSGAEREIQRTMLELLNQL 322 Query: 390 DGMN-AKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + +++ + +I ATNR +DPAL+RPGR+D+ I P Sbjct: 323 DGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENP 363
>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) Length = 715 Score = 130 bits (326), Expect = 3e-30 Identities = 68/160 (42%), Positives = 94/160 (58%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 LQE V++ +++P+KF G KG+L GPPG GKTLLA+A+A E F G E Sbjct: 293 LQEVVEF-LKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFD 351 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M+ G + +R +F +A+ +APCV+F DELDS+ + +NQLL EM Sbjct: 352 EMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGK--RIESPMHPYSRQTINQLLAEM 409 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + V IIGATN P+ +D AL+RPGR D + +P P Sbjct: 410 DGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRP 449
>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) (Presenilin-associated metalloprotease) (PAMP) Length = 773 Score = 129 bits (325), Expect = 4e-30 Identities = 68/160 (42%), Positives = 94/160 (58%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 LQE V++ +++P+KF G KG+L GPPG GKTLLA+A+A E F G E Sbjct: 351 LQEVVEF-LKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFD 409 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M+ G + +R +F +A+ +APCV+F DELDS+ + +NQLL EM Sbjct: 410 EMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGK--RIESPMHPYSRQTINQLLAEM 467 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + V IIGATN P+ +D AL+RPGR D + +P P Sbjct: 468 DGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRP 507
>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 695 Score = 129 bits (325), Expect = 4e-30 Identities = 67/161 (41%), Positives = 96/161 (59%), Gaps = 1/161 (0%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L E V + +++P+K+ G GVL GPPG GKTLLAKA+A E F SI G + + Sbjct: 205 LVEVVDF-LKNPKKYHDLGARIPAGVLLEGPPGTGKTLLAKAVAGEAGVPFYSISGSDFV 263 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M+ G + VR++F+ A+ +AP ++F DE+D++ Q LNQLL EM Sbjct: 264 EMFVGVGASRVRDLFENAKKTAPSIIFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLVEM 323 Query: 390 DG-MNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + +V +I ATNR D++DPALLRPGR D+ + + P Sbjct: 324 DGFQDDGNSVIVIAATNRSDVLDPALLRPGRFDRKVLVGAP 364
>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 609 Score = 128 bits (322), Expect = 8e-30 Identities = 66/160 (41%), Positives = 95/160 (59%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L E V + ++ P+K+ + G +GVL GPPG GKTLLA+A+A E F I G + + Sbjct: 153 LMEVVDF-LKFPKKYTEIGGKIPRGVLLVGPPGTGKTLLARAVAGEASVPFFRISGSDFI 211 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M+ G + VR++F +AR AP ++F DELD+I + LNQLL EM Sbjct: 212 EMFVGIGASRVRDLFKQAREKAPGIIFIDELDAIG-KSRLNAIHSNDEREQTLNQLLVEM 270 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + + ++ ATNRPD++DPALLRPGR D+ + + P Sbjct: 271 DGFDNTTGLILLAATNRPDVLDPALLRPGRFDRQVCVDRP 310
>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 638 Score = 128 bits (322), Expect = 8e-30 Identities = 64/154 (41%), Positives = 93/154 (60%), Gaps = 2/154 (1%) Frame = +3 Query: 54 VEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE 233 +++P+++ G KGVL GPPG GKTLLAKA+A E F S+ G + M+ G Sbjct: 195 LKYPDRYASLGAKIPKGVLLVGPPGTGKTLLAKAVAGEASVPFFSMGGSSFIEMFVGLGA 254 Query: 234 ANVREIFDKARGSAPCVLFFDELDSIA-TQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKK 410 + VR++FD A+ AP ++F DE+D+I ++ LNQLL EMDG ++ Sbjct: 255 SRVRDLFDIAKKEAPSIIFIDEIDAIGKSRAAGGMISGNDEREQTLNQLLAEMDGFGSEN 314 Query: 411 T-VFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 V ++ ATNRP+I+DPALLRPGR D+ + + P Sbjct: 315 APVIVLAATNRPEILDPALLRPGRFDRQVLVDKP 348
>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 128 bits (321), Expect = 1e-29 Identities = 63/154 (40%), Positives = 93/154 (60%), Gaps = 2/154 (1%) Frame = +3 Query: 54 VEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE 233 +++PE++ G KGVL GPPG GKTLLAKA+A E F S+ G + M+ G Sbjct: 189 LKYPERYANLGAKIPKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVGLGA 248 Query: 234 ANVREIFDKARGSAPCVLFFDELDSIA-TQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKK 410 + VR++F+ A+ AP ++F DE+D+I ++ LNQLL EMDG ++ Sbjct: 249 SRVRDLFETAKKQAPSIIFIDEIDAIGKSRAAGGVVSGNDEREQTLNQLLAEMDGFGSEN 308 Query: 411 T-VFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 V ++ ATNRP+I+DPAL+RPGR D+ + + P Sbjct: 309 APVIVLAATNRPEILDPALMRPGRFDRQVLVDKP 342
>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 128 bits (321), Expect = 1e-29 Identities = 63/154 (40%), Positives = 93/154 (60%), Gaps = 2/154 (1%) Frame = +3 Query: 54 VEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE 233 +++PE++ G KGVL GPPG GKTLLAKA+A E F S+ G + M+ G Sbjct: 189 LKYPERYANLGAKIPKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVGLGA 248 Query: 234 ANVREIFDKARGSAPCVLFFDELDSIA-TQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKK 410 + VR++F+ A+ AP ++F DE+D+I ++ LNQLL EMDG ++ Sbjct: 249 SRVRDLFETAKKQAPSIIFIDEIDAIGKSRAAGGMISGNDEREQTLNQLLAEMDGFGSEN 308 Query: 411 T-VFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 V ++ ATNRP+I+DPAL+RPGR D+ + + P Sbjct: 309 APVIVLAATNRPEILDPALMRPGRFDRQVLVDKP 342
>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein| AFG3 (EC 3.4.24.-) (TAT-binding homolog 10) Length = 761 Score = 126 bits (317), Expect = 3e-29 Identities = 63/154 (40%), Positives = 88/154 (57%), Gaps = 2/154 (1%) Frame = +3 Query: 54 VEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE 233 +++P K+ K G +G + GPPG GKTLLAKA A E F+S+ G E + M+ G Sbjct: 307 LKNPGKYTKLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFVEMFVGVGA 366 Query: 234 ANVREIFDKARGSAPCVLFFDELDSIATQ--XXXXXXXXXXXXXXXLNQLLTEMDGMNAK 407 + VR++F +AR AP ++F DE+D+I + LNQLL EMDG Sbjct: 367 SRVRDLFTQARSMAPSIIFIDEIDAIGKERGKGGALGGANDEREATLNQLLVEMDGFTTS 426 Query: 408 KTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 V ++ TNRPD++D AL+RPGR D+ I I P Sbjct: 427 DQVVVLAGTNRPDVLDNALMRPGRFDRHIQIDSP 460
>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) Length = 715 Score = 126 bits (316), Expect = 4e-29 Identities = 67/160 (41%), Positives = 93/160 (58%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 LQE V++ +++P+KF G KG+L GPPG GKTLLA+A+A E F G E Sbjct: 293 LQEVVEF-LKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFD 351 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 M+ G + +R +F +A+ +APCV+F DELDS+ + + QLL EM Sbjct: 352 EMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGK--RIEFPMHPYSRQTIIQLLAEM 409 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + V IIGATN P+ +D AL+RPGR D + +P P Sbjct: 410 DGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRP 449
>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)| Length = 662 Score = 124 bits (310), Expect = 2e-28 Identities = 62/160 (38%), Positives = 95/160 (59%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L + V++ + +PEKF + G KGVL GPPG GKTLLAKA++ E Q F+ G Sbjct: 178 LVDVVEF-LRNPEKFNQIGAKLPKGVLLVGPPGVGKTLLAKAVSGEAQVPFLYASGSSFD 236 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + G + +R++F A+ ++PC++F DE+DS+ +NQLL EM Sbjct: 237 EVLVGLGASRIRQLFTTAKQNSPCLVFIDEIDSVG--GNRTFSPHHPFANQTINQLLAEM 294 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG +K+ + ++GATN+ +++D ALLRPGR D I++ P Sbjct: 295 DGFQSKEGIIVLGATNQAEVLDKALLRPGRFDVQIHVSPP 334
>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein| RCA1 (EC 3.4.24.-) (TAT-binding homolog 12) Length = 825 Score = 123 bits (308), Expect = 3e-28 Identities = 64/153 (41%), Positives = 86/153 (56%), Gaps = 1/153 (0%) Frame = +3 Query: 54 VEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE 233 ++ P ++EK G +G + GPPG GKTLLAKA A E F + G E + M+ G Sbjct: 367 LKEPSRYEKMGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFYFVSGSEFVEMFVGVGA 426 Query: 234 ANVREIFDKARGSAPCVLFFDELDSIA-TQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKK 410 A VR++F AR +AP ++F DE+D+I + LNQ+L EMDG Sbjct: 427 ARVRDLFKTARENAPSIVFIDEIDAIGKARQKGNFSGANDERENTLNQMLVEMDGFTPAD 486 Query: 411 TVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 V ++ TNRPDI+D ALLRPGR D+ I I P Sbjct: 487 HVVVLAGTNRPDILDKALLRPGRFDRHINIDKP 519
>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1| protein) Length = 747 Score = 121 bits (304), Expect = 1e-27 Identities = 65/160 (40%), Positives = 92/160 (57%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+E V + ++ P K+E G KGVL GPPG GKTLLA+A A E +F + G E Sbjct: 293 LEEIVDF-LKDPTKYESLGGKLPKGVLLTGPPGTGKTLLARATAGEAGVDFFFMSGSEFD 351 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 ++ G +R++F +AR AP ++F DELD+I + LNQLL E+ Sbjct: 352 EVYVGVGAKRIRDLFAQARSRAPAIIFIDELDAIGGK---RNPKDQAYAKQTLNQLLVEL 408 Query: 390 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG + + IIGATN P+ +D AL RPGR D+++ + LP Sbjct: 409 DGFSQTSGIIIIGATNFPEALDKALTRPGRFDKVVNVDLP 448
>NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) (SKD2 protein) Length = 744 Score = 120 bits (300), Expect = 3e-27 Identities = 67/158 (42%), Positives = 90/158 (56%), Gaps = 9/158 (5%) Frame = +3 Query: 63 PEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISI-KGPELLTMWFGESEAN 239 PE E+ G KG+L YGPPGCGKTLLA+ I A + GPE+L + GESEAN Sbjct: 242 PEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEAN 301 Query: 240 VREIFDKAR--------GSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDG 395 +R++F A S ++ FDE+D+I Q +NQLL+++DG Sbjct: 302 IRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTV-VNQLLSKIDG 360 Query: 396 MNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 + + +IG TNRPD+ID ALLRPGRL+ + I LP Sbjct: 361 VEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLP 398 Score = 38.1 bits (87), Expect = 0.014 Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 2/123 (1%) Frame = +3 Query: 90 SPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE--ANVREIFDKA 263 +P VL GPP GKT +A IA E FI I P+ + + F E+ +++IFD A Sbjct: 534 TPLVSVLLEGPPHSGKTAVAAKIAEESNFPFIKICSPDKM-IGFSETAKCQAMKKIFDDA 592 Query: 264 RGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKKTVFIIGATNRP 443 S + D+++ + L LL + K + IIG T+R Sbjct: 593 YKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALL-VLLKKAPPQGRK--LLIIGTTSRK 649 Query: 444 DII 452 D++ Sbjct: 650 DVL 652
>NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 120 bits (300), Expect = 3e-27 Identities = 67/158 (42%), Positives = 90/158 (56%), Gaps = 9/158 (5%) Frame = +3 Query: 63 PEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISI-KGPELLTMWFGESEAN 239 PE E+ G KG+L YGPPGCGKTLLA+ I A + GPE+L + GESEAN Sbjct: 242 PEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEAN 301 Query: 240 VREIFDKAR--------GSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDG 395 +R++F A S ++ FDE+D+I Q +NQLL+++DG Sbjct: 302 IRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTV-VNQLLSKIDG 360 Query: 396 MNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 + + +IG TNRPD+ID ALLRPGRL+ + I LP Sbjct: 361 VEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLP 398 Score = 39.3 bits (90), Expect = 0.006 Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 2/123 (1%) Frame = +3 Query: 90 SPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE--ANVREIFDKA 263 +P VL GPP GKT LA IA E FI I P+ + + F E+ +++IFD A Sbjct: 534 TPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKM-IGFSETAKCQAMKKIFDDA 592 Query: 264 RGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKKTVFIIGATNRP 443 S + D+++ + L LL + K + IIG T+R Sbjct: 593 YKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALL-VLLKKAPPQGRK--LLIIGTTSRK 649 Query: 444 DII 452 D++ Sbjct: 650 DVL 652
>NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 119 bits (298), Expect = 5e-27 Identities = 67/158 (42%), Positives = 90/158 (56%), Gaps = 9/158 (5%) Frame = +3 Query: 63 PEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISI-KGPELLTMWFGESEAN 239 PE E+ G KG+L YGPPGCGKTLLA+ I A + GPE+L + GESEAN Sbjct: 242 PEIVEQMGCIHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEAN 301 Query: 240 VREIFDKAR--------GSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDG 395 +R++F A S ++ FDE+D+I Q +NQLL+++DG Sbjct: 302 IRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTV-VNQLLSKIDG 360 Query: 396 MNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 + + +IG TNRPD+ID ALLRPGRL+ + I LP Sbjct: 361 VEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLP 398 Score = 39.3 bits (90), Expect = 0.006 Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 2/123 (1%) Frame = +3 Query: 90 SPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE--ANVREIFDKA 263 +P VL GPP GKT LA IA E FI I P+ + + F E+ +++IFD A Sbjct: 534 TPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKM-IGFSETAKCQAMKKIFDDA 592 Query: 264 RGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKKTVFIIGATNRP 443 S + D+++ + L LL + K + IIG T+R Sbjct: 593 YKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALL-VLLKKAPPQGRK--LLIIGTTSRK 649 Query: 444 DII 452 D++ Sbjct: 650 DVL 652
>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase) (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3 protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein) (AtAAA1) Length = 523 Score = 116 bits (290), Expect = 4e-26 Identities = 70/168 (41%), Positives = 94/168 (55%), Gaps = 8/168 (4%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+E V P+ PE F+ P KGVL +GPPG GKTLLAKA+A EC F ++ L Sbjct: 251 LEEAVVLPLWMPEYFQGI-RRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLA 309 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + W GESE VR +FD AR AP +F DE+DS+ ++LL ++ Sbjct: 310 SKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGGSGEHESSRRVK--SELLVQV 367 Query: 390 DGMN--------AKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG++ ++K V ++ ATN P ID AL R RL++ IYIPLP Sbjct: 368 DGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRR--RLEKRIYIPLP 413
>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants| Length = 432 Score = 115 bits (287), Expect = 9e-26 Identities = 63/161 (39%), Positives = 93/161 (57%), Gaps = 1/161 (0%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+ETV P++ P+ F G P G+L YGPPG GK+ LAKA+A E + F SI +L+ Sbjct: 141 LKETVLLPIKLPQLFSH-GRKPWSGILLYGPPGTGKSYLAKAVATEAGSTFFSISSSDLV 199 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + W GESE VR++F+ AR P ++F DE+DS+ + L +M Sbjct: 200 SKWMGESERLVRQLFEMAREQKPSIIFIDEIDSLC---GSRSEGESESSRRIKTEFLVQM 256 Query: 390 DGMNAKKT-VFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 +G+ ++ V ++GATN P +D A+ R R ++ IYIPLP Sbjct: 257 NGVGKDESGVLVLGATNIPWTLDSAIRR--RFEKRIYIPLP 295
>NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleimide-sensitive| fusion protein 1) (NEM-sensitive fusion protein 1) (dNsf-1) (Protein comatose) Length = 745 Score = 113 bits (283), Expect = 3e-25 Identities = 66/158 (41%), Positives = 89/158 (56%), Gaps = 9/158 (5%) Frame = +3 Query: 63 PEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISI-KGPELLTMWFGESEAN 239 PE E+ G KG+L YGPPG GKTL+A+ I A I GP++L + GESEAN Sbjct: 242 PELVEQLGCKHVKGILLYGPPGTGKTLMARQIGTMLNAREPKIVNGPQILDKYVGESEAN 301 Query: 240 VREIFDKAR--------GSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDG 395 VR +F +A S ++ FDE+D+I Q +NQLLT++DG Sbjct: 302 VRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKQRGSVAGNSGVHDTV-VNQLLTKIDG 360 Query: 396 MNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 ++ + +IG TNR D+ID ALLRPGRL+ + I LP Sbjct: 361 VDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLP 398 Score = 32.7 bits (73), Expect = 0.59 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%) Frame = +3 Query: 105 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA-NVREIFDKARGSAPC 281 VL G P GKT LA +A F+ + PE + + ++ ++R+IFD A S Sbjct: 539 VLVAGAPNSGKTALAAQLAKMSDFPFVKVCSPEDMVGYTESAKCLHIRKIFDDAYRSMLS 598 Query: 282 VLFFDELDSI 311 + D ++ + Sbjct: 599 CIVVDNVERL 608
>SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog| Length = 792 Score = 112 bits (280), Expect = 6e-25 Identities = 65/158 (41%), Positives = 89/158 (56%), Gaps = 9/158 (5%) Frame = +3 Query: 63 PEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISI-KGPELLTMWFGESEAN 239 P EK G++ KG+L YGPPG GKTL+A+ I A I GPE+L + G+SE N Sbjct: 293 PGMVEKLGINHVKGILLYGPPGTGKTLIARQIGKMLNAREPKIVNGPEILNKYVGQSEEN 352 Query: 240 VREIF--------DKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDG 395 VR++F D+ S ++ FDELD+I + +NQLL +MDG Sbjct: 353 VRKLFADAEREYRDRGEESGLHIIIFDELDAICKKRGSSGGDTGVGDQV-VNQLLAKMDG 411 Query: 396 MNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 ++ + +IG TNR D+ID ALLRPGRL+ + I LP Sbjct: 412 VDQLNNILVIGMTNRKDMIDEALLRPGRLEVHMEISLP 449
>SEC18_YEAST (P18759) Vesicular-fusion protein SEC18| Length = 758 Score = 112 bits (279), Expect = 8e-25 Identities = 65/158 (41%), Positives = 87/158 (55%), Gaps = 9/158 (5%) Frame = +3 Query: 63 PEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISI-KGPELLTMWFGESEAN 239 P EK G+S KG+L YGPPG GKTL+A+ I A I GPE+L+ + G SE N Sbjct: 263 PSVIEKLGISHVKGLLLYGPPGTGKTLIARKIGTMLNAKEPKIVNGPEILSKYVGSSEEN 322 Query: 240 VREIFDKARG--------SAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDG 395 +R +F A S+ ++ FDELDS+ Q +NQLL +MDG Sbjct: 323 IRNLFKDAEAEYRAKGEESSLHIIIFDELDSVFKQRGSRGDGTGVGDNV-VNQLLAKMDG 381 Query: 396 MNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 ++ + +IG TNR D+ID ALLRPGR + + I LP Sbjct: 382 VDQLNNILVIGMTNRKDLIDSALLRPGRFEVQVEIHLP 419 Score = 31.6 bits (70), Expect = 1.3 Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 1/70 (1%) Frame = +3 Query: 105 VLFYGPPGCGKTLLAKAIANECQANFISIKGP-ELLTMWFGESEANVREIFDKARGSAPC 281 +L +GP G GKT LA IA + FI + P EL M A + F A S Sbjct: 560 LLIHGPAGSGKTALAAEIALKSGFPFIRLISPNELSGMSESAKIAYIDNTFRDAYKSPLN 619 Query: 282 VLFFDELDSI 311 +L D L+++ Sbjct: 620 ILVIDSLETL 629
>KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 111 bits (278), Expect = 1e-24 Identities = 70/167 (41%), Positives = 93/167 (55%), Gaps = 7/167 (4%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 LQE V P+ PE F+ P KGVL GPPG GKTLLAKA+A EC+ F ++ L Sbjct: 221 LQEAVVLPMWMPEFFKGI-RRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLT 279 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + + GESE VR +F+ AR +P +F DE+DSI ++ +LL +M Sbjct: 280 SKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSEEHEASRRVKA--ELLVQM 337 Query: 390 DGM-------NAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG+ + K V ++ ATN P ID AL R RL++ IYIPLP Sbjct: 338 DGVGGASENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLP 382
>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) (Lipotransin) Length = 491 Score = 111 bits (278), Expect = 1e-24 Identities = 70/167 (41%), Positives = 93/167 (55%), Gaps = 7/167 (4%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 LQE V P+ PE F+ P KGVL GPPG GKTLLAKA+A EC+ F ++ L Sbjct: 221 LQEAVVLPMWMPEFFKGI-RRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLT 279 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + + GESE VR +F+ AR +P +F DE+DSI ++ +LL +M Sbjct: 280 SKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSEEHEASRRMKA--ELLVQM 337 Query: 390 DGM-------NAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG+ + K V ++ ATN P ID AL R RL++ IYIPLP Sbjct: 338 DGVGGASENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLP 382
>NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 824 Score = 111 bits (278), Expect = 1e-24 Identities = 63/158 (39%), Positives = 89/158 (56%), Gaps = 9/158 (5%) Frame = +3 Query: 63 PEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISI-KGPELLTMWFGESEAN 239 PE E+ GM +G+L +GPPG GKTL+A+ I A I GP++L + GESE+N Sbjct: 319 PEFIEQLGMKHVRGILLFGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESESN 378 Query: 240 VREIFDKAR--------GSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDG 395 VR++F A S ++ FDE+D+I Q +NQLL++MDG Sbjct: 379 VRKLFADAEEEWRRCGANSGLHIIIFDEIDAICKQRGSMAGSSSVHDTV-VNQLLSKMDG 437 Query: 396 MNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 + + +IG TNR D+ID ALLRPGRL+ + + LP Sbjct: 438 VEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEVSLP 475 Score = 30.0 bits (66), Expect = 3.8 Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 2/88 (2%) Frame = +3 Query: 54 VEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE 233 V++PE S + V+ G GKT LA +A F+ + PE T+ F ES Sbjct: 605 VKNPEN------SGFRTVVLAGAAKTGKTSLAAQMAKSSDFPFVKVISPE-DTVGFSESA 657 Query: 234 --ANVREIFDKARGSAPCVLFFDELDSI 311 +++ F+ A+ S VL D L+ + Sbjct: 658 KCMALKKAFEDAKRSKLSVLLIDNLERL 685
>PRS2_METJA (Q58889) Putative 26S protease regulatory subunit homolog MJ1494| Length = 371 Score = 111 bits (278), Expect = 1e-24 Identities = 60/152 (39%), Positives = 89/152 (58%) Frame = +3 Query: 54 VEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE 233 +++ E + FG K VLFYGPPG GKTL+A+A+A E ++FI +K PEL+ G++ Sbjct: 140 MKYLENPKLFGEWAPKNVLFYGPPGTGKTLMARALATETNSSFILVKAPELIGEHVGDAS 199 Query: 234 ANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKKT 413 +RE++ +A SAPC++F DELD+I +N LLTE+DG+ + Sbjct: 200 KMIRELYQRASESAPCIVFIDELDAIG--LSREYQSLRGDVSEVVNALLTELDGIKENEG 257 Query: 414 VFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 V I ATN P ++DPA+ R ++ I LP Sbjct: 258 VVTIAATNNPAMLDPAI--RSRFEEEIEFKLP 287
>MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)| Length = 362 Score = 111 bits (278), Expect = 1e-24 Identities = 67/162 (41%), Positives = 89/162 (54%), Gaps = 2/162 (1%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGM--SPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPE 203 L E+V YP+ PE + + +PS GVL YGPPGCGKT+LAKA+A E ANFISI+ Sbjct: 103 LHESVIYPLMMPEVYSNSPLLQAPS-GVLLYGPPGCGKTMLAKALAKESGANFISIRMSS 161 Query: 204 LLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLT 383 ++ W+GES V +F A PC++F DE+DS + + +T Sbjct: 162 IMDKWYGESNKIVDAMFSLANKLQPCIIFIDEIDSFLRERSSTDHEVTATLKA---EFMT 218 Query: 384 EMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG+ V IIGATNR + ID A LR RL + + LP Sbjct: 219 LWDGLLNNGRVMIIGATNRINDIDDAFLR--RLPKRFLVSLP 258
>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein VPS4 (END13| protein) (DOA4-independent degradation protein 6) Length = 437 Score = 111 bits (278), Expect = 1e-24 Identities = 62/161 (38%), Positives = 93/161 (57%), Gaps = 1/161 (0%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+E V PV+ P F K P+ G+L YGPPG GK+ LAKA+A E + F S+ +L+ Sbjct: 145 LKEAVILPVKFPHLF-KGNRKPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLV 203 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + W GESE V+++F AR + P ++F DE+D++ +LL +M Sbjct: 204 SKWMGESEKLVKQLFAMARENKPSIIFIDEVDAL---TGTRGEGESEASRRIKTELLVQM 260 Query: 390 DGM-NAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 +G+ N + V ++GATN P +D A+ R R ++ IYIPLP Sbjct: 261 NGVGNDSQGVLVLGATNIPWQLDSAIRR--RFERRIYIPLP 299
>KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Fragment) Length = 486 Score = 111 bits (277), Expect = 1e-24 Identities = 71/167 (42%), Positives = 93/167 (55%), Gaps = 7/167 (4%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+E V P+ PE F+ P KGVL GPPG GKTLLAKA+A EC+ F +I L Sbjct: 218 LKEAVVLPMWMPEFFKGI-RRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNISSSTLT 276 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + + GESE VR +F+ AR AP +F DE+DSI ++ +LL +M Sbjct: 277 SKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSEEHEASRRVKA--ELLVQM 334 Query: 390 DGM-------NAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG+ + K V ++ ATN P ID AL R RL++ IYIPLP Sbjct: 335 DGVGGASENEDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLP 379
>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) Length = 516 Score = 110 bits (275), Expect = 2e-24 Identities = 68/167 (40%), Positives = 94/167 (56%), Gaps = 7/167 (4%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+E V P+ P+ F+ P KGVL GPPG GKT+LAKA+A EC F ++ L Sbjct: 246 LEEAVVLPLWMPDYFKGI-RRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSASLT 304 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + + GESE VR +F+ AR AP +F DE+DSI ++ ++LL +M Sbjct: 305 SKYHGESEKLVRLLFEMARFYAPSTIFIDEIDSICSKRGTGSEHEASRRVK--SELLIQM 362 Query: 390 DGMN-------AKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG++ + K V ++ ATN P ID AL R RL++ IYIPLP Sbjct: 363 DGVSGPSAGEESSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLP 407
>SEC18_CANAL (P34732) Vesicular-fusion protein SEC18| Length = 794 Score = 110 bits (275), Expect = 2e-24 Identities = 64/158 (40%), Positives = 85/158 (53%), Gaps = 9/158 (5%) Frame = +3 Query: 63 PEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISI-KGPELLTMWFGESEAN 239 PE EK KG+L YGPPG GKTL+A+ ++ I GPE+L+ + G SE N Sbjct: 299 PELAEKLDYKHCKGLLLYGPPGTGKTLIARKLSKMLNGKEPKIVNGPEMLSKYVGASEEN 358 Query: 240 VREIFD--------KARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDG 395 +R +F K S V+ FDELDS+ Q +NQLL++MDG Sbjct: 359 IRNLFKDAEAEYKLKGEDSDLHVIIFDELDSVFKQRGSGKSDGTGVGDNVVNQLLSKMDG 418 Query: 396 MNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 ++ + +IG TNR D+ID ALLRPGR + I I LP Sbjct: 419 VDQLNNILVIGMTNRLDLIDTALLRPGRFEIQIEISLP 456 Score = 35.8 bits (81), Expect = 0.069 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%) Frame = +3 Query: 99 KGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE--ANVREIFDKARGS 272 + +L YGPPG GKT +A +A FI + E L + GE + +F S Sbjct: 594 RSILLYGPPGVGKTSIATTLALNSDFPFIKMLSAETL-VGMGELRKIQEIDNVFRDVHKS 652 Query: 273 APCVLFFDELDSI 311 VL D++++I Sbjct: 653 PLNVLVIDKIENI 665
>NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleimide-sensitive| fusion protein 2) (NEM-sensitive fusion protein 2) (dNsf-2) Length = 752 Score = 110 bits (275), Expect = 2e-24 Identities = 63/158 (39%), Positives = 88/158 (55%), Gaps = 9/158 (5%) Frame = +3 Query: 63 PEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISI-KGPELLTMWFGESEAN 239 PE E+ G+ KG+L YGPPG GKTL+A+ I A I GP++L + GESEAN Sbjct: 247 PELVEQLGIKHVKGILLYGPPGTGKTLMARQIGTMLNAREPKIVNGPQILDKYVGESEAN 306 Query: 240 VREIFDKAR--------GSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDG 395 +R +F +A S ++ FDE+D+I + +NQLL ++DG Sbjct: 307 IRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAIC-KARGSVAGNSGVHDTVVNQLLAKIDG 365 Query: 396 MNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 + + +IG TNR D+ID ALLRPGRL+ + I LP Sbjct: 366 VEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLP 403 Score = 31.2 bits (69), Expect = 1.7 Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 3/64 (4%) Frame = +3 Query: 105 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE--ANVREIFDKA-RGSA 275 VL G P GK+ LA +A F+ + PE + + F ES ++R+IFD A R + Sbjct: 544 VLIEGAPNSGKSALAANLAQLSDFPFVKVCSPEDM-VGFTESAKCLHIRKIFDDAYRSTL 602 Query: 276 PCVL 287 C++ Sbjct: 603 SCIV 606
>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 110 bits (274), Expect = 3e-24 Identities = 69/167 (41%), Positives = 93/167 (55%), Gaps = 7/167 (4%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+E V P+ PE F+ P KGVL GPPG GKTLLAKA+A EC+ F ++ L Sbjct: 221 LKEAVVLPMWMPEFFKGI-RRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLT 279 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + + GESE VR +F+ AR +P +F DE+DSI ++ +LL +M Sbjct: 280 SKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSEEHEASRRVKA--ELLVQM 337 Query: 390 DGM-------NAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG+ + K V ++ ATN P ID AL R RL++ IYIPLP Sbjct: 338 DGVGGTSENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLP 382
>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 107 bits (268), Expect = 1e-23 Identities = 68/167 (40%), Positives = 93/167 (55%), Gaps = 7/167 (4%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+E V P+ P+ F+ P KGVL GPPG GKT+LAKA+A EC F ++ L Sbjct: 218 LREAVVLPMWMPDFFKGI-RRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLT 276 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + + GESE VR +F+ AR AP +F DE+DSI ++ ++LL +M Sbjct: 277 SKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVK--SELLIQM 334 Query: 390 DGM-------NAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG+ + K V ++ ATN P ID AL R RL++ IYIPLP Sbjct: 335 DGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLP 379
>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 107 bits (268), Expect = 1e-23 Identities = 68/167 (40%), Positives = 93/167 (55%), Gaps = 7/167 (4%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+E V P+ P+ F+ P KGVL GPPG GKT+LAKA+A EC F ++ L Sbjct: 218 LREAVVLPMWMPDFFKGI-RRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLT 276 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + + GESE VR +F+ AR AP +F DE+DSI ++ ++LL +M Sbjct: 277 SKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVK--SELLIQM 334 Query: 390 DGM-------NAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG+ + K V ++ ATN P ID AL R RL++ IYIPLP Sbjct: 335 DGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLP 379
>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 490 Score = 107 bits (268), Expect = 1e-23 Identities = 68/167 (40%), Positives = 93/167 (55%), Gaps = 7/167 (4%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+E V P+ P+ F+ P KGVL GPPG GKT+LAKA+A EC F ++ L Sbjct: 220 LREAVVLPMWMPDFFKGI-RRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLT 278 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + + GESE VR +F+ AR AP +F DE+DSI ++ ++LL +M Sbjct: 279 SKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVK--SELLIQM 336 Query: 390 DGM-------NAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG+ + K V ++ ATN P ID AL R RL++ IYIPLP Sbjct: 337 DGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLP 381
>NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) Length = 742 Score = 105 bits (263), Expect = 5e-23 Identities = 62/158 (39%), Positives = 87/158 (55%), Gaps = 9/158 (5%) Frame = +3 Query: 63 PEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISI-KGPELLTMWFGESEAN 239 P + G+ KG+L +GPPG GKTL+A+ I I GPE+L+ + GE+E N Sbjct: 239 PHVTSRLGIKHVKGMLLFGPPGTGKTLMARQIGKMLNGKDPKIVNGPEVLSKFVGETEKN 298 Query: 240 VREIFDKAR--------GSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDG 395 VR++F A S V+ FDE+D+I + +NQLLT++DG Sbjct: 299 VRDLFADAEQDQRTLGDASELHVIIFDEIDAIC-KSRGSTRDGTGVHDSIVNQLLTKIDG 357 Query: 396 MNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 + A V +IG TNR D++D ALLRPGRL+ + I LP Sbjct: 358 VEALNNVLLIGMTNRKDLLDEALLRPGRLEVQVEISLP 395 Score = 32.7 bits (73), Expect = 0.59 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 4/78 (5%) Frame = +3 Query: 90 SPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE----ANVREIFD 257 SP L GP G GKT LA I + ++ I E + G SE A++ ++F+ Sbjct: 528 SPLVTCLLEGPSGSGKTALAATIGIDSDFPYVKIVSAETM---IGLSESTKCAHIVKVFE 584 Query: 258 KARGSAPCVLFFDELDSI 311 A S ++ D+++ + Sbjct: 585 DAYKSPMSIIILDDIERL 602
>MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC 3.6.4.3)| (Katanin ATPase-containing subunit) Length = 472 Score = 102 bits (255), Expect = 5e-22 Identities = 62/163 (38%), Positives = 92/163 (56%), Gaps = 3/163 (1%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L E V P+ PE F+ SP K ++ GPPG GKTL+A+AIA+E + F ++ +L Sbjct: 205 LHEAVTLPLLVPEFFQGL-RSPWKAMVLAGPPGTGKTLIARAIASESSSTFFTVSSTDLS 263 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 + W G+SE VR +F+ AR AP ++F DE+D++ Q ++ L +M Sbjct: 264 SKWRGDSEKIVRLLFELARFYAPSIIFIDEIDTLGGQRGNSGEHEASRRVK--SEFLVQM 321 Query: 390 DGMNAK---KTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG K + VF++ ATN P +D AL R R ++ I+IPLP Sbjct: 322 DGSQNKFDSRRVFVLAATNIPWELDEALRR--RFEKRIFIPLP 362
>VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 102 bits (253), Expect = 8e-22 Identities = 58/162 (35%), Positives = 89/162 (54%), Gaps = 2/162 (1%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ-ANFISIKGPEL 206 L+E V P++ P F +P +G+L +GPPG GK+ LAKA+A E + F SI +L Sbjct: 146 LKEAVILPIKFPHLFTG-KRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDL 204 Query: 207 LTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTE 386 ++ W GESE V+ +F AR + P ++F DE+DS+ + L + Sbjct: 205 VSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLC---GSRSENESEAARRIKTEFLVQ 261 Query: 387 MDGMNAKKT-VFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 M G+ + ++GATN P ++D A+ R R ++ IYIPLP Sbjct: 262 MQGVGVDNDGILVLGATNIPWVLDSAIRR--RFEKRIYIPLP 301
>VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 102 bits (253), Expect = 8e-22 Identities = 58/162 (35%), Positives = 89/162 (54%), Gaps = 2/162 (1%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ-ANFISIKGPEL 206 L+E V P++ P F +P +G+L +GPPG GK+ LAKA+A E + F SI +L Sbjct: 146 LKEAVILPIKFPHLFTG-KRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDL 204 Query: 207 LTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTE 386 ++ W GESE V+ +F AR + P ++F DE+DS+ + L + Sbjct: 205 VSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLC---GSRSENESEAARRIKTEFLVQ 261 Query: 387 MDGMNAKKT-VFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 M G+ + ++GATN P ++D A+ R R ++ IYIPLP Sbjct: 262 MQGVGVDNDGILVLGATNIPWVLDSAIRR--RFEKRIYIPLP 301
>VPS4A_MOUSE (Q8VEJ9) Vacuolar sorting protein 4a| Length = 437 Score = 101 bits (251), Expect = 1e-21 Identities = 58/162 (35%), Positives = 89/162 (54%), Gaps = 2/162 (1%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ-ANFISIKGPEL 206 L+E V P++ P F +P +G+L +GPPG GK+ LAKA+A E + F S+ +L Sbjct: 139 LKEAVILPIKFPHLFTG-KRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDL 197 Query: 207 LTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTE 386 ++ W GESE V+ +F+ AR P ++F DE+DS+ + L + Sbjct: 198 MSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLC---GSRNENESEAARRIKTEFLVQ 254 Query: 387 MDGM-NAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 M G+ N ++GATN P ++D A+ R R ++ IYIPLP Sbjct: 255 MQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLP 294
>VPS4A_HUMAN (Q9UN37) Vacuolar sorting protein 4a (SKD2 protein) (hVPS4)| (VPS4-1) Length = 437 Score = 101 bits (251), Expect = 1e-21 Identities = 58/162 (35%), Positives = 89/162 (54%), Gaps = 2/162 (1%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ-ANFISIKGPEL 206 L+E V P++ P F +P +G+L +GPPG GK+ LAKA+A E + F S+ +L Sbjct: 139 LKEAVILPIKFPHLFTG-KRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDL 197 Query: 207 LTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTE 386 ++ W GESE V+ +F+ AR P ++F DE+DS+ + L + Sbjct: 198 MSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLC---GSRNENESEAARRIKTEFLVQ 254 Query: 387 MDGM-NAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 M G+ N ++GATN P ++D A+ R R ++ IYIPLP Sbjct: 255 MQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLP 294
>SPAST_MOUSE (Q9QYY8) Spastin| Length = 614 Score = 100 bits (249), Expect = 2e-21 Identities = 61/168 (36%), Positives = 90/168 (53%), Gaps = 2/168 (1%) Frame = +3 Query: 12 KMSNGXLQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISI 191 +++ LQE V P PE F +P++G+L +GPPG GKT+LAKA+A E A F +I Sbjct: 346 ELAKQALQEIVILPSLRPELFTGL-RAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNI 404 Query: 192 KGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLN 371 L + + GE E VR +F AR P ++F DE+DS+ + Sbjct: 405 SAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLK---T 461 Query: 372 QLLTEMDGMNA--KKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 + L E DG+ + V ++GATNRP +D A+LR R + +Y+ LP Sbjct: 462 EFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSLP 507
>SPAST_HUMAN (Q9UBP0) Spastin| Length = 616 Score = 100 bits (248), Expect = 3e-21 Identities = 61/167 (36%), Positives = 89/167 (53%), Gaps = 2/167 (1%) Frame = +3 Query: 15 MSNGXLQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 194 ++ LQE V P PE F +P++G+L +GPPG GKT+LAKA+A E A F +I Sbjct: 349 LAKQALQEIVILPSLRPELFTGL-RAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNIS 407 Query: 195 GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQ 374 L + + GE E VR +F AR P ++F DE+DS+ + + Sbjct: 408 AASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLK---TE 464 Query: 375 LLTEMDGMNA--KKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 L E DG+ + V ++GATNRP +D A+LR R + +Y+ LP Sbjct: 465 FLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSLP 509
>TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-binding homolog 6)| Length = 754 Score = 99.4 bits (246), Expect = 5e-21 Identities = 59/173 (34%), Positives = 87/173 (50%), Gaps = 9/173 (5%) Frame = +3 Query: 18 SNGXLQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKG 197 + L+E V YP P+ F+ P +G+L +GPPG GKT++AKA+A E + F S+ Sbjct: 479 AKNSLKEAVVYPFLRPDLFKGL-REPVRGMLLFGPPGTGKTMIAKAVATESNSTFFSVSA 537 Query: 198 PELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQL 377 LL+ + GESE VR +F A+ +P ++F DE+DS+ T L Sbjct: 538 SSLLSKYLGESEKLVRALFYMAKKLSPSIIFIDEIDSMLTARSDNENESSRRIKTELLIQ 597 Query: 378 LTEMDGMNAK---------KTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 + + A+ V ++GATN P ID A R R + +YIPLP Sbjct: 598 WSSLSSATAQSEDRNNTLDSRVLVLGATNLPWAIDDAARR--RFSRKLYIPLP 648
>ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein 1-A| Length = 380 Score = 99.4 bits (246), Expect = 5e-21 Identities = 57/163 (34%), Positives = 82/163 (50%), Gaps = 3/163 (1%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGM-SPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL 206 +Q+TV P + F + P KGVL YGPPGCGKTL+AKA A FI+++ L Sbjct: 106 MQDTVILPFQKRHLFSGSKLLQPPKGVLLYGPPGCGKTLIAKATAKASGCRFINLQASTL 165 Query: 207 LTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTE 386 W+GES+ +F A PC++F DE+DS Q ++ Sbjct: 166 TDKWYGESQKLTAAVFSLAVKIQPCIIFLDEIDSFLRNRSSMDHEATAMMKA---QFMSL 222 Query: 387 MDGMNA--KKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG++ V ++GATNRP +D A+LR R+ ++ LP Sbjct: 223 WDGLDTGENSQVMVMGATNRPQDVDAAILR--RMPTAFHVGLP 263
>MSP1_CAEEL (P54815) Protein MSP1 homolog| Length = 342 Score = 98.6 bits (244), Expect = 9e-21 Identities = 53/161 (32%), Positives = 83/161 (51%), Gaps = 1/161 (0%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L++ + P+ + +SP +G+L YGPPGCGKTLLAKA+A FI+++ L Sbjct: 95 LKDRIILPLRFASQSGSHLLSPPRGILLYGPPGCGKTLLAKAVARAAGCRFINLQVSNLT 154 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEM 389 W+GES+ +F A+ P ++F DE+DS Q +T Sbjct: 155 DKWYGESQKLAAAVFSVAQKFQPTIIFIDEIDSFLRDRQSHDHESTAMMKA---QFMTLW 211 Query: 390 DGMNAK-KTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 DG ++ + ++GATNRP +D A+LR R+ +P+P Sbjct: 212 DGFSSSGDQIIVMGATNRPRDVDAAILR--RMTARFQVPVP 250
>ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1| Length = 361 Score = 98.2 bits (243), Expect = 1e-20 Identities = 54/150 (36%), Positives = 79/150 (52%), Gaps = 3/150 (2%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGM-SPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL 206 L++TV P++ FE + P KGVL YGPPGCGKTL+AKA A E FI+++ L Sbjct: 103 LKDTVILPIKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTL 162 Query: 207 LTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTE 386 W+GES+ +F A P ++F DE+DS Q ++ Sbjct: 163 TDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSSSDHEATAMMKA---QFMSL 219 Query: 387 MDGMNAKKT--VFIIGATNRPDIIDPALLR 470 DG++ + V ++GATNRP +D A++R Sbjct: 220 WDGLDTDHSCQVIVMGATNRPQDLDSAIMR 249
>ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1| Length = 361 Score = 98.2 bits (243), Expect = 1e-20 Identities = 54/150 (36%), Positives = 79/150 (52%), Gaps = 3/150 (2%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGM-SPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL 206 L++TV P++ FE + P KGVL YGPPGCGKTL+AKA A E FI+++ L Sbjct: 103 LKDTVILPIKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTL 162 Query: 207 LTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTE 386 W+GES+ +F A P ++F DE+DS Q ++ Sbjct: 163 TDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSSSDHEATAMMKA---QFMSL 219 Query: 387 MDGMNAKKT--VFIIGATNRPDIIDPALLR 470 DG++ + V ++GATNRP +D A++R Sbjct: 220 WDGLDTDHSCQVIVMGATNRPQDLDSAIMR 249
>ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1| Length = 361 Score = 98.2 bits (243), Expect = 1e-20 Identities = 54/150 (36%), Positives = 79/150 (52%), Gaps = 3/150 (2%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGM-SPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL 206 L++TV P++ FE + P KGVL YGPPGCGKTL+AKA A E FI+++ L Sbjct: 103 LKDTVILPIKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTL 162 Query: 207 LTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTE 386 W+GES+ +F A P ++F DE+DS Q ++ Sbjct: 163 TDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSSSDHEATAMMKA---QFMSL 219 Query: 387 MDGMNAKKT--VFIIGATNRPDIIDPALLR 470 DG++ + V ++GATNRP +D A++R Sbjct: 220 WDGLDTDHSCQVIVMGATNRPQDLDSAIMR 249
>ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein 1-B| Length = 362 Score = 97.1 bits (240), Expect = 3e-20 Identities = 56/150 (37%), Positives = 78/150 (52%), Gaps = 3/150 (2%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGM-SPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL 206 L++TV P++ FE + P KGVL YGPPGCGKTL+AKA A E FI+++ L Sbjct: 107 LKDTVILPIQKRHLFEGSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGFRFINLQPSTL 166 Query: 207 LTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTE 386 W+GES+ +F A P ++F DE+DS Q ++ Sbjct: 167 TDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSSSDHEATAMMKA---QFMSL 223 Query: 387 MDGMNAKKT--VFIIGATNRPDIIDPALLR 470 DG++ V I+GATNRP +D A+LR Sbjct: 224 WDGLDTDYNCQVIIMGATNRPQDLDSAILR 253
>PRS2_METTH (O27092) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 93.6 bits (231), Expect = 3e-19 Identities = 54/152 (35%), Positives = 82/152 (53%) Frame = +3 Query: 54 VEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE 233 +E P++F + + VLF+G PG GKT+LAK++ANE + IK L+ G+ Sbjct: 146 LEDPDRFRDWA---PRNVLFHGSPGTGKTMLAKSLANELKVPLYLIKATSLIGEHVGDGA 202 Query: 234 ANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKKT 413 + E+++ A +AP V+F DE+D+I +N LLTEMDG+N Sbjct: 203 RQIHELYELASKTAPSVIFIDEMDAIGLD--RRYQSLRGDVSEVVNALLTEMDGINQNWG 260 Query: 414 VFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 V IGATN P+++D A+ R ++ I LP Sbjct: 261 VVTIGATNNPELLDKAI--RSRFEEEIEFKLP 290
>PRS2_METTM (P42811) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 93.2 bits (230), Expect = 4e-19 Identities = 54/152 (35%), Positives = 82/152 (53%) Frame = +3 Query: 54 VEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE 233 +E P++F + + VLF+G PG GKT+LAK++ANE + IK L+ G+ Sbjct: 146 LEDPDRFRDWA---PRNVLFHGSPGTGKTMLAKSLANELRVPLYLIKATSLIGEHVGDGA 202 Query: 234 ANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKKT 413 + E+++ A +AP V+F DE+D+I +N LLTEMDG+N Sbjct: 203 RQIHELYELASKTAPSVIFIDEMDAIGLD--RRFQSLRGDVSEVVNALLTEMDGINQNWG 260 Query: 414 VFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 V IGATN P+++D A+ R ++ I LP Sbjct: 261 VVTIGATNNPELLDNAI--RSRFEEEIEFKLP 290
>YCF2_MESVI (Q9MUP8) Protein ycf2 (RF2)| Length = 890 Score = 92.4 bits (228), Expect = 6e-19 Identities = 53/164 (32%), Positives = 83/164 (50%), Gaps = 19/164 (11%) Frame = +3 Query: 69 KFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRE 248 K + + S G LF GPPG GKTL+AKA++ E + ++ ++G + G + A V + Sbjct: 369 KQKNYSNSYPMGYLFAGPPGTGKTLMAKAMSYEAETPYLYVEGSQFRCREEGVANARVDD 428 Query: 249 IFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXX------------------XXXXLNQ 374 +F + + +PC+L+ DE+DSIA + L Q Sbjct: 429 LFKQIQNISPCILYIDEIDSIAERREEANKQLEQLKTIGDSIEGSNINIDQKPSDTVLMQ 488 Query: 375 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLD-QLIYIP 503 L MDG + + IIGATNR + +D A++RPGR D Q+++ P Sbjct: 489 FLIYMDGYKKRNDLIIIGATNRIETLDDAIMRPGRFDRQIVFSP 532
>SAP1_YEAST (P39955) Protein SAP1| Length = 897 Score = 86.3 bits (212), Expect = 4e-17 Identities = 58/178 (32%), Positives = 81/178 (45%), Gaps = 18/178 (10%) Frame = +3 Query: 30 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 209 L+E V YP P+ F P +G+L +GPPG GKT+LA+A+A E + F SI L Sbjct: 617 LKEAVVYPFLRPDLFRGL-REPVRGMLLFGPPGTGKTMLARAVATESHSTFFSISASSLT 675 Query: 210 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXX------------------XX 335 + + GESE VR +F A+ +P ++F DE+DSI Sbjct: 676 SKYLGESEKLVRALFAIAKKLSPSIIFVDEIDSIMGSRNNENENESSRRIKNEFLVQWSS 735 Query: 336 XXXXXXXXXXLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 N ++ +G V ++ ATN P ID A R R + YIPLP Sbjct: 736 LSSAAAGSNKSNTNNSDTNGDEDDTRVLVLAATNLPWSIDEAARR--RFVRRQYIPLP 791
>Y4KL_RHISN (P55530) Hypothetical 37.6 kDa AAA-family ATPase y4kL| Length = 330 Score = 82.0 bits (201), Expect = 8e-16 Identities = 51/148 (34%), Positives = 76/148 (51%) Frame = +3 Query: 66 EKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVR 245 ++ + G+ +LF GPPGCGKTL A+ A E +K L++ + GE+ N+R Sbjct: 108 DEIRQHGLKVRSKMLFCGPPGCGKTLCAEIFAAELGLPLFRVKLDRLISSYLGETATNIR 167 Query: 246 EIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKKTVFII 425 + F+ AR PCVLFFDE D++A +N LL +D M K F+I Sbjct: 168 KTFEFAR-KQPCVLFFDEFDALA--RTRDDSGEHNELRRVVNSLLLFIDNMQPKG--FLI 222 Query: 426 GATNRPDIIDPALLRPGRLDQLIYIPLP 509 ATN +D A+ R R D++++ P Sbjct: 223 AATNLDRSLDAAIWR--RFDEVLWFDRP 248
>YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46| Length = 506 Score = 80.5 bits (197), Expect = 2e-15 Identities = 48/148 (32%), Positives = 72/148 (48%) Frame = +3 Query: 66 EKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVR 245 ++ E++G+ KG+L G G GK+L AK+IANE + + L GESEA VR Sbjct: 265 KRAEEYGLPIPKGLLLVGIQGTGKSLTAKSIANEWNLPLLKLDVGRLFGGIIGESEARVR 324 Query: 246 EIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKKTVFII 425 ++ A +PC+L+ DE+D T +T + K VF++ Sbjct: 325 QMIQFAETISPCILWIDEIDKAFT--GSNFNNDSGTTKRVFGTFITWLS--EKKSPVFVV 380 Query: 426 GATNRPDIIDPALLRPGRLDQLIYIPLP 509 N D + P LLR GR D++ +I LP Sbjct: 381 ATANNIDSLPPELLRKGRFDEVFFIGLP 408
>YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)| Length = 497 Score = 76.3 bits (186), Expect = 5e-14 Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 2/145 (1%) Frame = +3 Query: 81 FGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDK 260 +G+ +G+L G G GK+L AKAIA E Q + + L GESE+ +R++ D Sbjct: 254 YGLPTPRGLLLIGIQGTGKSLTAKAIATEWQLPLLKLDVGRLFGGIVGESESRLRQMIDV 313 Query: 261 ARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKKT--VFIIGAT 434 A +PC+L+ DE+D + N++L ++KT VF++ Sbjct: 314 AETLSPCILWIDEMDKAFSNNDSRGDSGTS------NRVLATFISWLSEKTKPVFVVATA 367 Query: 435 NRPDIIDPALLRPGRLDQLIYIPLP 509 N D++ ++R GR D++ ++ LP Sbjct: 368 NNVDLLPLEIIRKGRFDEIFFLDLP 392
>YCF46_PORPU (P51189) Hypothetical 56.0 kDa protein ycf46 (ORF491)| Length = 491 Score = 70.9 bits (172), Expect = 2e-12 Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 1/144 (0%) Frame = +3 Query: 81 FGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDK 260 +G+ KG+L G G GK+L AKAIAN+ + + +L GESE+ +RE+ Sbjct: 254 YGIPTPKGLLLVGIQGTGKSLTAKAIANDWTLPLLRLDIGKLFGGLVGESESRMREMVTI 313 Query: 261 ARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKKT-VFIIGATN 437 A G +PCVL+ DE+D + T + ++ K T VF++ N Sbjct: 314 AEGLSPCVLWIDEIDKAFSNLYSQGDSGTSARVFG-----TFITWLSEKTTPVFVVATAN 368 Query: 438 RPDIIDPALLRPGRLDQLIYIPLP 509 + +LR GR D++ ++ LP Sbjct: 369 TIQNLPSEMLRKGRFDEIFFLDLP 392
>FTSH_CHLVU (P56369) Cell division protein ftsH homolog| Length = 1720 Score = 63.9 bits (154), Expect = 2e-10 Identities = 27/48 (56%), Positives = 38/48 (79%) Frame = +3 Query: 366 LNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 L+QLL E+DG+ + V I GATNRP+++DPALLRPGR D+++ + LP Sbjct: 1155 LSQLLIELDGIQGRNGVVIFGATNRPEVLDPALLRPGRFDKIVKVGLP 1202 Score = 63.2 bits (152), Expect = 4e-10 Identities = 32/74 (43%), Positives = 49/74 (66%), Gaps = 1/74 (1%) Frame = +3 Query: 102 GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA-NVREIFDKARGSAP 278 G+L GPPG GKTLL +A+A E Q I + G L+ GES A ++ +F +AR AP Sbjct: 1009 GILLTGPPGTGKTLLVQALAGEAQVPVIVLSGSSLMEP--GESAAFKLQLVFQEARQLAP 1066 Query: 279 CVLFFDELDSIATQ 320 C++F DE+D+++++ Sbjct: 1067 CIVFIDEIDTLSSK 1080
>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 381 Score = 63.2 bits (152), Expect = 4e-10 Identities = 27/48 (56%), Positives = 35/48 (72%) Frame = +3 Query: 366 LNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 LNQ+L EMDG + V +I ATNRPD++DPAL RPGR D+ + + LP Sbjct: 20 LNQMLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLP 67
>BCS1_SCHPO (Q9P6Q3) Probable mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 449 Score = 58.9 bits (141), Expect = 8e-09 Identities = 40/143 (27%), Positives = 64/143 (44%) Frame = +3 Query: 72 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREI 251 ++ G+ +G L YGPPG GKT A+A E + + E G ++ + + Sbjct: 234 YDTRGIPYRRGYLLYGPPGSGKTSFLYALAGELDYDICVLNLAEK-----GLTDDRLNHL 288 Query: 252 FDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKKTVFIIGA 431 A V+ +++DS A Q + LL +DG+ + I Sbjct: 289 LSNVPPKA--VVLLEDVDS-AFQGRERSGEVGFHANVTFSGLLNALDGVTSSDERIIFMT 345 Query: 432 TNRPDIIDPALLRPGRLDQLIYI 500 TN P+ +DPAL+RPGR+D Y+ Sbjct: 346 TNHPEKLDPALVRPGRVDVKAYL 368
>YCF2_MARPO (P09975) Protein ycf2| Length = 2136 Score = 58.9 bits (141), Expect = 8e-09 Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 12/155 (7%) Frame = +3 Query: 78 KFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK-------GPELLT-MWFG--- 224 +FG+S SKG+L GP G++ L K +A E I P+++T W Sbjct: 1391 QFGLSYSKGILLIGPIETGRSYLIKNLAAESYVPLFKISINKLLYNKPDVITESWMNILI 1450 Query: 225 ESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMNA 404 ES + D A+ +PC+++ + + + + D Sbjct: 1451 ESLRRLNLTLDFAKKMSPCIIWIQNIHQLNVNRLTQNVESDPTFLLGILLKYFQTDFSKT 1510 Query: 405 KKT-VFIIGATNRPDIIDPALLRPGRLDQLIYIPL 506 KK + +IG+T+ P +DPAL+ P RLD++I + L Sbjct: 1511 KKNNIIVIGSTHLPKKVDPALISPNRLDKIINVRL 1545
>BCS1_XENLA (Q7ZTL7) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 419 Score = 57.0 bits (136), Expect = 3e-08 Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 5/154 (3%) Frame = +3 Query: 54 VEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQAN--FISIKGPELLTMWFGE 227 +E+P+ + G+ +G L YGPPGCGK+ A+A E + + +S+ L Sbjct: 209 IENPKWYSDRGIPYRRGYLLYGPPGCGKSSFITALAGELEYSICLMSLSDSSL------- 261 Query: 228 SEANVREIFDKARGSAPCVLFFDELDSIATQXXXXX---XXXXXXXXXXLNQLLTEMDGM 398 S+ + + A + ++ +++D+ + LL +DG+ Sbjct: 262 SDDRLNHLLSVAPQQS--IILLEDVDAAFVSRDLNKQNPTAYQGMGRLTFSGLLNALDGV 319 Query: 399 NAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYI 500 + + + TN D +DPAL+RPGR+D Y+ Sbjct: 320 ASTEARIVFMTTNHIDRLDPALIRPGRVDVKQYV 353
>BCS1_HUMAN (Q9Y276) Mitochondrial chaperone BCS1 (BCS1-like protein) (H-BCS1)| Length = 419 Score = 55.1 bits (131), Expect = 1e-07 Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 5/158 (3%) Frame = +3 Query: 42 VQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQAN--FISIKGPELLTM 215 VQ +++P+ + G+ +G L YGPPGCGK+ A+A E + + +S+ L Sbjct: 205 VQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSL--- 261 Query: 216 WFGESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXX---XXXXXXXXXXLNQLLTE 386 S+ + + A + ++ +++D+ + LL Sbjct: 262 ----SDDRLNHLLSVAPQQS--LVLLEDVDAAFLSRDLAVENPVKYQGLGRLTFSGLLNA 315 Query: 387 MDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYI 500 +DG+ + + + TN D +DPAL+RPGR+D Y+ Sbjct: 316 LDGVASTEARIVFMTTNHVDRLDPALIRPGRVDLKEYV 353
>BCS1_YEAST (P32839) Mitochondrial chaperone BCS1| Length = 456 Score = 54.7 bits (130), Expect = 1e-07 Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 3/142 (2%) Frame = +3 Query: 84 GMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREI-FDK 260 G+ +G L YGPPG GKT +A+A E N + SE N+ + + Sbjct: 256 GIPYRRGYLLYGPPGSGKTSFIQALAGELDYNICILN----------LSENNLTDDRLNH 305 Query: 261 ARGSAP--CVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKKTVFIIGAT 434 + P +L +++D+ A + LL +DG+ + + T Sbjct: 306 LMNNMPERSILLLEDIDA-AFNKRSQTGEQGFHSSVTFSGLLNALDGVTSSEETITFMTT 364 Query: 435 NRPDIIDPALLRPGRLDQLIYI 500 N P+ +D A++RPGR+D +++ Sbjct: 365 NHPEKLDAAIMRPGRIDYKVFV 386
>YCF2_PINTH (P41653) Protein ycf2| Length = 2054 Score = 54.7 bits (130), Expect = 1e-07 Identities = 43/175 (24%), Positives = 72/175 (41%), Gaps = 25/175 (14%) Frame = +3 Query: 51 PVEHPEKFEKF-GMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 227 P H + F G SKG+L GP G G++ L K++A + I I L +W+GE Sbjct: 1354 PTFHGKPFSLHSGSLLSKGILLIGPMGTGRSYLVKSLAADSYVPLIRIS---LKKLWYGE 1410 Query: 228 -------------------SEANVREIFDKARGSAPCVLFFDELDSI----ATQXXXXXX 338 + + A+ +PC+++ + + AT Sbjct: 1411 YLDYPLERIPTEFDPFVKDKMEDFHITLELAKRMSPCIIWIPNIHELNLNDATNYLFGFG 1470 Query: 339 XXXXXXXXXLNQLLTEMDG-MNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYI 500 +N L DG ++ + + +I +T+ P +DPAL+ P RLD+ I I Sbjct: 1471 FTDLFLSVLMNNLFRFRDGEKDSMRNILVIASTHIPQRVDPALIAPNRLDRSINI 1525
>YCF2_ANTFO (Q859W7) Protein ycf2| Length = 2392 Score = 53.5 bits (127), Expect = 3e-07 Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 13/164 (7%) Frame = +3 Query: 48 YPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK-------GPEL 206 Y + P + + F SKG+L GP GK+ L K +A + I I P++ Sbjct: 1638 YRIPIPFELDLFS---SKGILLVGPTEIGKSYLIKNLAADSYVPLIKISISKLLYNKPDV 1694 Query: 207 LT-MWFG---ESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXX--XXXXXXXL 368 +T W ES + I + A+ +PC+++ ++ + L Sbjct: 1695 ITESWINILMESLQRLTLILELAKKMSPCIIWIQDIHELNVNRSTENVESDPTFLLGILL 1754 Query: 369 NQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYI 500 TE + K + IIG+T+ P +DPAL+ P RLD+L+ I Sbjct: 1755 KYFHTEFISKSTKG-IIIIGSTHLPRKVDPALISPNRLDKLMNI 1797
>TRP13_RAT (Q5XHZ9) Thyroid receptor-interacting protein 13 (Thyroid hormone| receptor interactor 13) (Trip-13) Length = 432 Score = 52.8 bits (125), Expect = 5e-07 Identities = 41/148 (27%), Positives = 63/148 (42%), Gaps = 15/148 (10%) Frame = +3 Query: 105 VLFYGPPGCGKTLLAKAIANEC---------QANFISIKGPELLTMWFGESEANVREIFD 257 VL +GPPG GKT L KA+A + I I L + WF ES V ++F Sbjct: 175 VLLHGPPGTGKTSLCKALAQKLTIRLSSRYRYGQLIEINSHSLFSKWFSESGKLVTKMFQ 234 Query: 258 KARG-----SAPCVLFFDELDSI-ATQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKKTVF 419 K + A + DE++S+ A + +N +LT++D + V Sbjct: 235 KIQDLIDDKEALVFVLIDEVESLTAARNACRAGAEPSDAIRVVNAVLTQIDQIKRHSNVV 294 Query: 420 IIGATNRPDIIDPALLRPGRLDQLIYIP 503 I+ +N + ID A + + Q I P Sbjct: 295 ILTTSNITEKIDVAFVDRADIKQYIGPP 322
>TRP13_MOUSE (Q3UA06) Thyroid receptor-interacting protein 13 (Thyroid hormone| receptor interactor 13) (Trip-13) Length = 432 Score = 52.8 bits (125), Expect = 5e-07 Identities = 41/148 (27%), Positives = 63/148 (42%), Gaps = 15/148 (10%) Frame = +3 Query: 105 VLFYGPPGCGKTLLAKAIANEC---------QANFISIKGPELLTMWFGESEANVREIFD 257 VL +GPPG GKT L KA+A + I I L + WF ES V ++F Sbjct: 175 VLLHGPPGTGKTSLCKALAQKLTIRLSSRYRYGQLIEINSHSLFSKWFSESGKLVTKMFQ 234 Query: 258 KARG-----SAPCVLFFDELDSI-ATQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKKTVF 419 K + A + DE++S+ A + +N +LT++D + V Sbjct: 235 KIQDLIDDKEALVFVLIDEVESLTAARNACRAGAEPSDAIRVVNAVLTQIDQIKRHSNVV 294 Query: 420 IIGATNRPDIIDPALLRPGRLDQLIYIP 503 I+ +N + ID A + + Q I P Sbjct: 295 ILTTSNITEKIDVAFVDRADIKQYIGPP 322
>TRP13_HUMAN (Q15645) Thyroid receptor-interacting protein 13 (Thyroid hormone| receptor interactor 13) (Trip-13) (Human papillomavirus type 16 E1 protein-binding protein) (HPV16 E1 protein-binding protein) (16E1-BP) Length = 432 Score = 52.8 bits (125), Expect = 5e-07 Identities = 41/148 (27%), Positives = 63/148 (42%), Gaps = 15/148 (10%) Frame = +3 Query: 105 VLFYGPPGCGKTLLAKAIANEC---------QANFISIKGPELLTMWFGESEANVREIFD 257 VL +GPPG GKT L KA+A + I I L + WF ES V ++F Sbjct: 175 VLLHGPPGTGKTSLCKALAQKLTIRLSSRYRYGQLIEINSHSLFSKWFSESGKLVTKMFQ 234 Query: 258 KARG-----SAPCVLFFDELDSI-ATQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKKTVF 419 K + A + DE++S+ A + +N +LT++D + V Sbjct: 235 KIQDLIDDKDALVFVLIDEVESLTAARNACRAGTEPSDAIRVVNAVLTQIDQIKRHSNVV 294 Query: 420 IIGATNRPDIIDPALLRPGRLDQLIYIP 503 I+ +N + ID A + + Q I P Sbjct: 295 ILTTSNITEKIDVAFVDRADIKQYIGPP 322
>PCH2_YEAST (P38126) Pachytene checkpoint protein 2| Length = 536 Score = 52.8 bits (125), Expect = 5e-07 Identities = 41/165 (24%), Positives = 69/165 (41%), Gaps = 27/165 (16%) Frame = +3 Query: 96 SKGVLFYGPPGCGKTLLAKAIANECQAN-----------------FISIKGPELLTMWFG 224 +K +L +GPPG GKT L KA+ + I + + + WFG Sbjct: 307 NKLLLVHGPPGTGKTTLCKALCQKLSVRREFSDGSDTIDTNYKGIIIELSCARIFSKWFG 366 Query: 225 ESEANVREIF---------DKARGSAPCVLFFDELDSIA-TQXXXXXXXXXXXXXXXLNQ 374 ES N+ +F ++ RG C+L DE+++IA ++ +N Sbjct: 367 ESSKNISIVFKDIEELLKVNEGRGIFICLL-IDEVEAIASSRTNLSSRNESTDGIRVVNT 425 Query: 375 LLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 509 LLT++D + + +N D +D A + R D + Y+ P Sbjct: 426 LLTQLDRLKKYHNFLALATSNLLDSLDDAFV--DRADGVFYVGNP 468
>PCH2_CAEEL (Q09535) Putative pachytene checkpoint protein 2| Length = 424 Score = 52.4 bits (124), Expect = 7e-07 Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 15/136 (11%) Frame = +3 Query: 105 VLFYGPPGCGKTLLAKAIANE---------CQANFISIKGPELLTMWFGESEANVREIFD 257 +L GPPG GKT L K +A ++ + I L + WF ES V+++FD Sbjct: 175 ILLTGPPGTGKTSLCKGLAQHLSIRMNDKYSKSVMLEINSHSLFSKWFSESGKLVQKMFD 234 Query: 258 KARGSA---PCVLF--FDELDSIA-TQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKKTVF 419 + A C++F DE++S+ + +N LLT++D + + V Sbjct: 235 QIDELAEDEKCMVFVLIDEVESLGMCRESSSSRSEPSDAIRAVNALLTQIDRIRRRDNVL 294 Query: 420 IIGATNRPDIIDPALL 467 I+ +N +D AL+ Sbjct: 295 ILCTSNLESTLDKALV 310
>BCS1_MOUSE (Q9CZP5) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 418 Score = 52.0 bits (123), Expect = 9e-07 Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 5/154 (3%) Frame = +3 Query: 54 VEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQAN--FISIKGPELLTMWFGE 227 +++P+ + G+ +G L YGPPGCGK+ A+A E + + +S+ L Sbjct: 209 IDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSL------- 261 Query: 228 SEANVREIFDKARGSAPCVLFFDELDSIATQXXXXX---XXXXXXXXXXLNQLLTEMDGM 398 S+ + + A + ++ +++D+ + LL +DG+ Sbjct: 262 SDDRLNHLLSVAPQQS--LVLLEDVDAAFLSRDLAVENPIKYQGLGRLTFSGLLNALDGV 319 Query: 399 NAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYI 500 + + + TN D +DPAL+RPGR+D Y+ Sbjct: 320 ASTEARIVFMTTNYIDRLDPALIRPGRVDLKEYV 353
>ATD3B_HUMAN (Q5T9A4) ATPase family AAA domain-containing protein 3B| Length = 648 Score = 49.7 bits (117), Expect = 5e-06 Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 1/136 (0%) Frame = +3 Query: 105 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGS-APC 281 +L YGPPG GKTL AK +A ++ + G ++ M E + ++FD A S Sbjct: 348 ILLYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPMG-REGVTAMHKLFDWANTSRRGL 406 Query: 282 VLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPA 461 +LF DE D+ + LN L M G ++ K + ++ A+N P+ D A Sbjct: 407 LLFMDEADAFLRK--RATEEISKDLRATLNAFLYHM-GQHSNKFMLVL-ASNLPEQFDCA 462 Query: 462 LLRPGRLDQLIYIPLP 509 + R+D +++ LP Sbjct: 463 I--NSRIDVMVHFDLP 476
>YCF2_PINKO (Q85WV5) Protein ycf2| Length = 1320 Score = 49.7 bits (117), Expect = 5e-06 Identities = 38/156 (24%), Positives = 63/156 (40%), Gaps = 21/156 (13%) Frame = +3 Query: 96 SKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL------------------TMWF 221 SKG+L GP G G++ L K++A + I I +LL T W Sbjct: 623 SKGILLIGPMGTGRSYLIKSLAADSYVPLIRISLKKLLYGKFLYYPDPGRIPTEFNTFW- 681 Query: 222 GESEANVREIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMN 401 ++ + F+ A+ +PC+++ + + L LL + Sbjct: 682 RDTIDHFHITFELAKRMSPCIIWIPNIHELNVNDTITHLFGLGFTDSFLGLLLNYISRGG 741 Query: 402 AK---KTVFIIGATNRPDIIDPALLRPGRLDQLIYI 500 K + + I +T+ P +DPAL+ P RLD I I Sbjct: 742 EKDSIRNILFIASTHIPQRVDPALIAPNRLDSSINI 777
>RUVB_RICCN (Q92I87) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 342 Score = 48.9 bits (115), Expect = 8e-06 Identities = 30/70 (42%), Positives = 38/70 (54%) Frame = +3 Query: 108 LFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVL 287 LFYGPPG GKT LAK I+NE NF S GP +L + A++ I + VL Sbjct: 54 LFYGPPGLGKTTLAKIISNEIGGNFKSTSGPAILKV------ADLAAILTNLEKND--VL 105 Query: 288 FFDELDSIAT 317 F DE+ + T Sbjct: 106 FIDEIHRLNT 115
>ATAD3_MOUSE (Q925I1) ATPase family AAA domain-containing protein 3 (AAA-ATPase| TOB3) Length = 591 Score = 48.9 bits (115), Expect = 8e-06 Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 1/138 (0%) Frame = +3 Query: 99 KGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGS-A 275 + VL YGPPG GKTL AK +A ++ + G ++ M E + ++FD A S Sbjct: 345 RNVLMYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPMG-REGVTAMHKVFDWASTSRR 403 Query: 276 PCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKKTVFIIGATNRPDIID 455 +LF DE D+ + LN L G ++ K + ++ A+N+P+ D Sbjct: 404 GLLLFVDEADAFLRK--RATEKISEDLRATLNAFL-HRTGQHSSKFMLVL-ASNQPEQFD 459 Query: 456 PALLRPGRLDQLIYIPLP 509 A+ R+D+++ LP Sbjct: 460 WAI--NDRIDEMVCFALP 475
>RUVB_RICFE (Q4ULW6) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 342 Score = 48.5 bits (114), Expect = 1e-05 Identities = 30/70 (42%), Positives = 37/70 (52%) Frame = +3 Query: 108 LFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVL 287 LFYGPPG GKT LAK I+NE NF S GP +L A++ I + VL Sbjct: 54 LFYGPPGLGKTTLAKIISNEIGGNFKSTSGPAIL------KAADLAAILTNLEKND--VL 105 Query: 288 FFDELDSIAT 317 F DE+ + T Sbjct: 106 FIDEIHRLNT 115
>BCS1_BRARE (Q7ZV60) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 420 Score = 48.5 bits (114), Expect = 1e-05 Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 6/155 (3%) Frame = +3 Query: 54 VEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQAN--FISIKGPELLTMWFGE 227 + +P+ + G+ +G L YGPPGCGK+ A+A E + +S+ L Sbjct: 209 IGNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELGYSICLMSLSDRSL------- 261 Query: 228 SEANVREIFDKARGSAPCVLFFDELDSIATQX----XXXXXXXXXXXXXXLNQLLTEMDG 395 S+ + + A + ++ +++D+ + LL +DG Sbjct: 262 SDDRLNHLLSVAPQQS--IILLEDVDAAFVSRELLPTENPLAYQGMGRLTFSGLLNALDG 319 Query: 396 MNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYI 500 + + + + TN + +DPAL+RPGR+D Y+ Sbjct: 320 VASSEARIVFMTTNFIERLDPALVRPGRVDLKQYV 354
>YCF2_PHYPA (P61243) Protein ycf2| Length = 2259 Score = 48.1 bits (113), Expect = 1e-05 Identities = 41/148 (27%), Positives = 63/148 (42%), Gaps = 13/148 (8%) Frame = +3 Query: 96 SKGVLFYGPPGCGKTLLAKAIANECQANFISIK-------GPELLT-MWFG---ESEANV 242 SKG+L G G++ L K +A I I P++LT W ES + Sbjct: 1549 SKGILLIGSQETGRSYLVKNLAANSFIPLIKISINKLLYNKPDILTESWINILMESLRRL 1608 Query: 243 REIFDKARGSAPCVLFFDELDSIATQXXXXXXXXXXXXXXXLNQLLTEMDGMNAKKT--V 416 I + A +PC+++ + + + L G + K T + Sbjct: 1609 NLILELAEKLSPCIIWMPNIHELNVNRSTQNVESDPTFLLGIF-LKYFQTGFSKKNTNNI 1667 Query: 417 FIIGATNRPDIIDPALLRPGRLDQLIYI 500 IIG+T+ P +DPAL+ P RLD+LI I Sbjct: 1668 IIIGSTHLPKKVDPALISPNRLDRLINI 1695
>RUVB_RICPR (Q9ZDE5) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 342 Score = 47.8 bits (112), Expect = 2e-05 Identities = 29/70 (41%), Positives = 37/70 (52%) Frame = +3 Query: 108 LFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVL 287 LFYGPPG GKT LAK I+NE NF S GP ++ A++ I + VL Sbjct: 54 LFYGPPGLGKTTLAKIISNEIGGNFKSTAGPAII------KAADLASILTNLEKND--VL 105 Query: 288 FFDELDSIAT 317 F DE+ + T Sbjct: 106 FIDEIHRLNT 115 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,178,144 Number of Sequences: 219361 Number of extensions: 1629000 Number of successful extensions: 8501 Number of sequences better than 10.0: 500 Number of HSP's better than 10.0 without gapping: 7841 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8301 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3754426130 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
