ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags32m11 |
|---|---|
| Clone Library Name | barley_pub |
>GCN1L_HUMAN (Q92616) GCN1-like protein 1 (HsGCN1)| Length = 2670 Score = 150 bits (378), Expect = 4e-36 Identities = 85/213 (39%), Positives = 125/213 (58%), Gaps = 3/213 (1%) Frame = +2 Query: 2 RAEEFG--RGLAYLIGFLFKNSKLYLADEAPDMMSILITLLSDTDNATVLAAWEAFSRVV 175 R+ E G + A ++ SK ++S LI L +D+ + +W+A + + Sbjct: 2160 RSPEVGMRQAAAIILNIYCSRSKADYTSHLRSLVSGLIRLFNDSSPVVLEESWDALNAIT 2219 Query: 176 GSVPKEQLPTHIKLVRDAVSTARDKERRRRKGVPVLIPGLCLPK-ALQPFLPIFQQGLIS 352 + I+ + + ++ + +PG CLPK + LP+ ++G+++ Sbjct: 2220 KKLDAGNQLALIEELHKEIRLIGNESKGEH------VPGFCLPKKGVTSILPVLREGVLT 2273 Query: 353 GSAETKEQAAEGLGELIDVTSEKTLREVVVPITGPLIRILGDRFPWQVKSAILSTLTIII 532 GS E KE+AA+ LG +I +TS LR VV ITGPLIRILGDRF W VK+A+L TL++++ Sbjct: 2274 GSPEQKEEAAKALGLVIRLTSADALRPSVVSITGPLIRILGDRFSWNVKAALLETLSLLL 2333 Query: 533 AKGGLALKPFLPQLQTTFVKCLQDSNRSVRTRA 631 AK G+ALKPFLPQLQTTF K LQDSNR VR +A Sbjct: 2334 AKVGIALKPFLPQLQTTFTKALQDSNRGVRLKA 2366 Score = 32.0 bits (71), Expect = 1.7 Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 4/103 (3%) Frame = +2 Query: 119 SDTDNATVLAAWEAFSRVVGSVPK---EQLPTHIKLVRDAV-STARDKERRRRKGVPVLI 286 SDT A+ + VV + P+ E LPT L+ + ST DK + + L+ Sbjct: 1893 SDTQLVVRQASLHVWKIVVSNTPRTLREILPTLFGLLLGFLASTCADKRTIAARTLGDLV 1952 Query: 287 PGLCLPKALQPFLPIFQQGLISGSAETKEQAAEGLGELIDVTS 415 L K L +PI ++GL S ++ ++ GL E++ TS Sbjct: 1953 RKLG-EKILPEIIPILEEGLRSQKSDERQGVCIGLSEIMKSTS 1994
>YAQ5_SCHPO (Q10105) Putative translational activator C18G6.05c (GCN1 homolog)| Length = 2670 Score = 121 bits (304), Expect = 2e-27 Identities = 79/195 (40%), Positives = 112/195 (57%), Gaps = 1/195 (0%) Frame = +2 Query: 50 FKNSKLYLADEAPDMMSILITLLSDTDNATVLAAWEAFSRVVGSVPKEQLPTHIKLVRDA 229 F+N KL D + ITL D V+AA A + +V ++ K+QL + LV A Sbjct: 2162 FQNCKLDYYRYVGDWVRHFITLFEDKSQDVVVAAVAAQNTLVSALRKDQLDS---LVSIA 2218 Query: 230 VSTARDKERRRRKGVPVLIPGLCLPKALQPFLPIFQQGLISGSAETKEQAAEGLGELIDV 409 + RD + V +P + + + LPIF GL+ G+ + +EQ+A G+ +++ Sbjct: 2219 YHSLRDVGSQG-----VNLPAFEVAQGVNSILPIFLYGLMHGTMDQREQSALGIADIVLK 2273 Query: 410 TSEKTLREVVVPITGPLIRILGDRFPWQVKSAILSTLTIIIAKGGLALKPFLPQLQTTFV 589 T LR V ITGPLIRI+G+RFP +VK AIL TL II++K L+PFLPQLQ TF Sbjct: 2274 TEPSKLRPFVTQITGPLIRIIGERFPVEVKCAILYTLNIILSKISTFLRPFLPQLQRTFA 2333 Query: 590 KCLQD-SNRSVRTRA 631 KCL D S+ +R+RA Sbjct: 2334 KCLGDPSSEVIRSRA 2348 Score = 37.7 bits (86), Expect = 0.030 Identities = 50/202 (24%), Positives = 84/202 (41%), Gaps = 4/202 (1%) Frame = +2 Query: 20 RGLAYLIGFLFKNSKLYLADEAPDMMSILITLLSDTDNAT----VLAAWEAFSRVVGSVP 187 +G AY + L K + + +++ L L+S+ NAT L A EAFSR++G Sbjct: 1379 KGAAYGLAGLVKGYGIKAFQDF-NILDSLSELISNRQNATHRQVALFAVEAFSRILGIYF 1437 Query: 188 KEQLPTHIKLVRDAVSTARDKERRRRKGVPVLIPGLCLPKALQPFLPIFQQGLISGSAET 367 + LP + L+ + ++ R I ++ LP GL + + Sbjct: 1438 EPYLPDLLPLLLTSFGDNANEVREATMDAVKQIMSQLSAFGVKLLLPTLLDGLNEYNWRS 1497 Query: 368 KEQAAEGLGELIDVTSEKTLREVVVPITGPLIRILGDRFPWQVKSAILSTLTIIIAKGGL 547 K+ + E LG L+ + K L + I L +L D QV++ +L + G + Sbjct: 1498 KKASVEILG-LMSYMAPKQLSVFLPTIIPKLSEVLTDSHS-QVRNTANKSL---LRFGDV 1552 Query: 548 ALKPFLPQLQTTFVKCLQDSNR 613 P + L T +K L D R Sbjct: 1553 ISNPEIQTLVPTLLKALSDCTR 1574
>GCN1_YEAST (P33892) Translational activator GCN1| Length = 2672 Score = 101 bits (252), Expect = 2e-21 Identities = 66/183 (36%), Positives = 100/183 (54%), Gaps = 1/183 (0%) Frame = +2 Query: 86 PDMMSILITLLSDTDNATVLAAWEAFSRVVGSVPKEQLPTHIKLVRDAVSTARDKERRRR 265 P+ +S I L D D V + A S ++ V K PT KLV+ A + R+ + Sbjct: 2141 PNFVSHAILSLDDEDQRVVNGNFNALSTLLKKVDK---PTLEKLVKPAKQSLALTGRQGQ 2197 Query: 266 KGVPVLIPGLCLPKALQPFLPIFQQGLISGSAETKEQAAEGLGELIDVTSEKTLREVVVP 445 + LP+ LPIF GL+ GS + +E++A + +++ T L+ V Sbjct: 2198 D-----VAAFKLPRGPNCVLPIFLHGLMYGSNDEREESALAIADVVSKTPAANLKPFVSV 2252 Query: 446 ITGPLIRILGDRFPWQVKSAILSTLTIIIAKGGLALKPFLPQLQTTFVKCLQD-SNRSVR 622 ITGPLIR++G+RF +K+AIL L ++ K + L+PF+PQLQ TFVK L D +N ++R Sbjct: 2253 ITGPLIRVVGERFSSDIKAAILFALNVLFIKIPMFLRPFIPQLQRTFVKSLSDATNETLR 2312 Query: 623 TRA 631 RA Sbjct: 2313 LRA 2315
>COPB2_RAT (O35142) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)| (p102) Length = 904 Score = 32.7 bits (73), Expect = 0.97 Identities = 16/56 (28%), Positives = 35/56 (62%), Gaps = 1/56 (1%) Frame = +2 Query: 32 YLIGFLFKNSKLYLADEAPDMMSI-LITLLSDTDNATVLAAWEAFSRVVGSVPKEQ 196 YL+G++ K+++LYL D+ +++S L+ + + A + + +V+ ++PKEQ Sbjct: 561 YLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMRRDFSMADKVLPTIPKEQ 616
>COPB2_MOUSE (O55029) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)| (p102) Length = 905 Score = 32.7 bits (73), Expect = 0.97 Identities = 16/56 (28%), Positives = 35/56 (62%), Gaps = 1/56 (1%) Frame = +2 Query: 32 YLIGFLFKNSKLYLADEAPDMMSI-LITLLSDTDNATVLAAWEAFSRVVGSVPKEQ 196 YL+G++ K+++LYL D+ +++S L+ + + A + + +V+ ++PKEQ Sbjct: 562 YLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMRRDFSMADKVLPTIPKEQ 617
>COPB2_HUMAN (P35606) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)| (p102) Length = 905 Score = 32.7 bits (73), Expect = 0.97 Identities = 16/56 (28%), Positives = 35/56 (62%), Gaps = 1/56 (1%) Frame = +2 Query: 32 YLIGFLFKNSKLYLADEAPDMMSI-LITLLSDTDNATVLAAWEAFSRVVGSVPKEQ 196 YL+G++ K+++LYL D+ +++S L+ + + A + + +V+ ++PKEQ Sbjct: 561 YLLGYIPKDNRLYLGDKELNIISYSLLVSVLEYQTAVMRRDFSMADKVLPTIPKEQ 616
>COPB2_BOVIN (P35605) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)| (p102) Length = 905 Score = 32.7 bits (73), Expect = 0.97 Identities = 16/56 (28%), Positives = 35/56 (62%), Gaps = 1/56 (1%) Frame = +2 Query: 32 YLIGFLFKNSKLYLADEAPDMMSI-LITLLSDTDNATVLAAWEAFSRVVGSVPKEQ 196 YL+G++ K+++LYL D+ +++S L+ + + A + + +V+ ++PKEQ Sbjct: 561 YLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMRRDFSMADKVLPTIPKEQ 616
>TNPO2_HUMAN (O14787) Transportin-2 (Karyopherin beta-2b)| Length = 897 Score = 32.7 bits (73), Expect = 0.97 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 5/78 (6%) Frame = +2 Query: 428 REVVVPITGPLIRILGDRFPWQVKSAILSTLTIIIAKGGLALKPFLPQLQTTFVKCLQDS 607 RE ++P PL++ L W VK + + L I + P+LP+L ++CL D Sbjct: 388 REELLPHLLPLLKGLLFHPEWVVKESGILVLGAIAEGCMQGMVPYLPELIPHLIQCLSDK 447 Query: 608 NRSVR-----TRARISSW 646 VR T +R + W Sbjct: 448 KALVRSIACWTLSRYAHW 465
>TNPO2_MOUSE (Q99LG2) Transportin-2 (Karyopherin beta-2b)| Length = 887 Score = 32.7 bits (73), Expect = 0.97 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 5/78 (6%) Frame = +2 Query: 428 REVVVPITGPLIRILGDRFPWQVKSAILSTLTIIIAKGGLALKPFLPQLQTTFVKCLQDS 607 RE ++P PL++ L W VK + + L I + P+LP+L ++CL D Sbjct: 388 REELLPHLLPLLKGLLFHPEWVVKESGILVLGAIAEGCMQGMVPYLPELIPHLIQCLSDK 447 Query: 608 NRSVR-----TRARISSW 646 VR T +R + W Sbjct: 448 KALVRSIACWTLSRYAHW 465
>TNPO1_MOUSE (Q8BFY9) Transportin-1 (Importin beta-2) (Karyopherin beta-2)| Length = 890 Score = 32.7 bits (73), Expect = 0.97 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 5/78 (6%) Frame = +2 Query: 428 REVVVPITGPLIRILGDRFPWQVKSAILSTLTIIIAKGGLALKPFLPQLQTTFVKCLQDS 607 R+ ++P PL++ L W VK + + L I + P+LP+L ++CL D Sbjct: 391 RDELLPHILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDK 450 Query: 608 NRSVR-----TRARISSW 646 VR T +R + W Sbjct: 451 KALVRSITCWTLSRYAHW 468
>TNPO1_HUMAN (Q92973) Transportin-1 (Importin beta-2) (Karyopherin beta-2) (M9| region interaction protein) (MIP) Length = 890 Score = 32.7 bits (73), Expect = 0.97 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 5/78 (6%) Frame = +2 Query: 428 REVVVPITGPLIRILGDRFPWQVKSAILSTLTIIIAKGGLALKPFLPQLQTTFVKCLQDS 607 R+ ++P PL++ L W VK + + L I + P+LP+L ++CL D Sbjct: 391 RDELLPHILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDK 450 Query: 608 NRSVR-----TRARISSW 646 VR T +R + W Sbjct: 451 KALVRSITCWTLSRYAHW 468
>EF3_CANGA (O93796) Elongation factor 3 (EF-3)| Length = 1045 Score = 32.3 bits (72), Expect = 1.3 Identities = 40/181 (22%), Positives = 79/181 (43%), Gaps = 5/181 (2%) Frame = +2 Query: 125 TDNATVLAAWEAFSRVVGSVPKEQLPTHIKLVRDAVSTARDKERRRR--KGVPVLIPGLC 298 T + V AA E S + G++ + +P K + +DK+ + V + Sbjct: 22 TADNRVEAAQEVASFLNGNIIEHDIPE--KFFEELAKAVKDKKTSANFLEAVAHIANEAN 79 Query: 299 LPKALQPFLPIFQQGLISGSAETKEQAAEGLGELIDVTSEKTLREVVVPITGP-LIRILG 475 L +++PF+ I I A K++ + + V K + V + P L + L Sbjct: 80 LSPSVEPFV-ITLVPEICAKAGDKDKDVQAVASKTLVAISKAINPVAIKAYLPHLTKSLE 138 Query: 476 DRFPWQVKSAILSTLTIII--AKGGLALKPFLPQLQTTFVKCLQDSNRSVRTRARISSWK 649 WQ K ++L+ ++ ++ AK +AL+ +P+L + + D+ + V+ A + K Sbjct: 139 TTNKWQEKVSVLAAISALVDAAKEQVALR--MPELIPVLSETMWDTKKEVKEAATATMTK 196 Query: 650 A 652 A Sbjct: 197 A 197
>FRAP_RAT (P42346) FKBP12-rapamycin complex-associated protein (FK506-binding| protein 12-rapamycin complex-associated protein 1) (Rapamycin target protein) (RAPT1) (Mammalian target of rapamycin) (MTOR) Length = 2549 Score = 32.3 bits (72), Expect = 1.3 Identities = 46/214 (21%), Positives = 90/214 (42%), Gaps = 19/214 (8%) Frame = +2 Query: 38 IGFLFKNSKLYLADEAPDMMSILITLLSDTDNATV--LAAWEAFSRVVGSV-----PKEQ 196 IG L + S L + ++ I++ +L D+ +A W ++V S P + Sbjct: 802 IGELAQVSGLEMRKWVDELFVIIMDMLQDSSLLAKRQVALW-TLGQLVASTGYVVEPYRK 860 Query: 197 LPTHIKLVRDAVSTARDKERRRRKGVPVLIPGLCLPKALQPFLPIFQQGLI--------- 349 PT ++++ + + T +++ RR I L L AL P+ G+I Sbjct: 861 YPTLLEVLLNFLKTEQNQGTRREA-----IRVLGLLGALDPYKHKVNIGMIDQSRDASAV 915 Query: 350 --SGSAETKEQAAEGLGELIDVTSEKTLREVVVPITG-PLIRILGDRFPWQVKSAILSTL 520 S S +++ + E++ L E ++ L+RI D+ + ++ + Sbjct: 916 SLSESKSSQDSSDYSTSEMLVNMGNLPLDEFYPAVSMVALMRIFRDQSLSHHHTMVVQAI 975 Query: 521 TIIIAKGGLALKPFLPQLQTTFVKCLQDSNRSVR 622 T I GL FLPQ+ TF+ ++ + ++R Sbjct: 976 TFIFKSLGLKCVQFLPQVMPTFLNVIRVCDGAIR 1009
>FRAP_MOUSE (Q9JLN9) FKBP12-rapamycin complex-associated protein (FK506-binding| protein 12-rapamycin complex-associated protein 1) (Rapamycin target protein) (RAPT1) (Mammalian target of rapamycin) (MTOR) Length = 2549 Score = 32.3 bits (72), Expect = 1.3 Identities = 46/214 (21%), Positives = 90/214 (42%), Gaps = 19/214 (8%) Frame = +2 Query: 38 IGFLFKNSKLYLADEAPDMMSILITLLSDTDNATV--LAAWEAFSRVVGSV-----PKEQ 196 IG L + S L + ++ I++ +L D+ +A W ++V S P + Sbjct: 802 IGELAQVSGLEMRKWVDELFIIIMDMLQDSSLLAKRQVALW-TLGQLVASTGYVVEPYRK 860 Query: 197 LPTHIKLVRDAVSTARDKERRRRKGVPVLIPGLCLPKALQPFLPIFQQGLI--------- 349 PT ++++ + + T +++ RR I L L AL P+ G+I Sbjct: 861 YPTLLEVLLNFLKTEQNQGTRREA-----IRVLGLLGALDPYKHKVNIGMIDQSRDASAV 915 Query: 350 --SGSAETKEQAAEGLGELIDVTSEKTLREVVVPITG-PLIRILGDRFPWQVKSAILSTL 520 S S +++ + E++ L E ++ L+RI D+ + ++ + Sbjct: 916 SLSESKSSQDSSDYSTSEMLVNMGNLPLDEFYPAVSMVALMRIFRDQSLSHHHTMVVQAI 975 Query: 521 TIIIAKGGLALKPFLPQLQTTFVKCLQDSNRSVR 622 T I GL FLPQ+ TF+ ++ + ++R Sbjct: 976 TFIFKSLGLKCVQFLPQVMPTFLNVIRVCDGAIR 1009
>FRAP_HUMAN (P42345) FKBP12-rapamycin complex-associated protein (FK506-binding| protein 12-rapamycin complex-associated protein 1) (Rapamycin target protein) (RAPT1) (Mammalian target of rapamycin) (MTOR) Length = 2549 Score = 32.3 bits (72), Expect = 1.3 Identities = 46/214 (21%), Positives = 90/214 (42%), Gaps = 19/214 (8%) Frame = +2 Query: 38 IGFLFKNSKLYLADEAPDMMSILITLLSDTDNATV--LAAWEAFSRVVGSV-----PKEQ 196 IG L + S L + ++ I++ +L D+ +A W ++V S P + Sbjct: 802 IGELAQVSGLEMRKWVDELFIIIMDMLQDSSLLAKRQVALW-TLGQLVASTGYVVEPYRK 860 Query: 197 LPTHIKLVRDAVSTARDKERRRRKGVPVLIPGLCLPKALQPFLPIFQQGLI--------- 349 PT ++++ + + T +++ RR I L L AL P+ G+I Sbjct: 861 YPTLLEVLLNFLKTEQNQGTRREA-----IRVLGLLGALDPYKHKVNIGMIDQSRDASAV 915 Query: 350 --SGSAETKEQAAEGLGELIDVTSEKTLREVVVPITG-PLIRILGDRFPWQVKSAILSTL 520 S S +++ + E++ L E ++ L+RI D+ + ++ + Sbjct: 916 SLSESKSSQDSSDYSTSEMLVNMGNLPLDEFYPAVSMVALMRIFRDQSLSHHHTMVVQAI 975 Query: 521 TIIIAKGGLALKPFLPQLQTTFVKCLQDSNRSVR 622 T I GL FLPQ+ TF+ ++ + ++R Sbjct: 976 TFIFKSLGLKCVQFLPQVMPTFLNVIRVCDGAIR 1009
>MOT8_HUMAN (P36021) Monocarboxylate transporter 8 (MCT 8) (X-linked| PEST-containing transporter) (MCT 7) Length = 613 Score = 31.6 bits (70), Expect = 2.2 Identities = 20/56 (35%), Positives = 26/56 (46%) Frame = +2 Query: 458 LIRILGDRFPWQVKSAILSTLTIIIAKGGLALKPFLPQLQTTFVKCLQDSNRSVRT 625 LIR+LGD+ +LST ++ L +P LP Q T S R VRT Sbjct: 323 LIRMLGDKIKLAQTFQVLSTFMFVLMLLSLTYRPLLPSSQDT------PSKRGVRT 372
>Y4KK_RHISN (P55529) Hypothetical 34.9 kDa protein y4kK| Length = 312 Score = 31.2 bits (69), Expect = 2.8 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 3/47 (6%) Frame = +2 Query: 185 PKEQLPTHIKLVRDAVSTARDKERRRRKGV---PVLIPGLCLPKALQ 316 P P H +RD ++ ARD++RRRRK P LI + + ALQ Sbjct: 28 PDRDGPRHSAKLRDELNAARDEQRRRRKPEFVNPALILRVQMTGALQ 74
>PMRA_STRR6 (P0A4K5) Multi-drug resistance efflux pump pmrA| Length = 399 Score = 30.8 bits (68), Expect = 3.7 Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 3/84 (3%) Frame = +2 Query: 317 PFLPIFQQGLISGSAETKEQAAEGLGELIDVTSEKTLREVVVPITGPLIRILGDRF---P 487 PF+PIF + L GS +Q A G I V++ + + P+ IL D++ P Sbjct: 29 PFMPIFVENLGVGS----QQVAFYAGLAISVSA------ISAALFSPIWGILADKYGRKP 78 Query: 488 WQVKSAILSTLTIIIAKGGLALKP 559 +++ + T+T+ GGLA P Sbjct: 79 MMIRAGLAMTITM----GGLAFVP 98
>PMRA_STRPN (P0A4K4) Multi-drug resistance efflux pump pmrA| Length = 399 Score = 30.8 bits (68), Expect = 3.7 Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 3/84 (3%) Frame = +2 Query: 317 PFLPIFQQGLISGSAETKEQAAEGLGELIDVTSEKTLREVVVPITGPLIRILGDRF---P 487 PF+PIF + L GS +Q A G I V++ + + P+ IL D++ P Sbjct: 29 PFMPIFVENLGVGS----QQVAFYAGLAISVSA------ISAALFSPIWGILADKYGRKP 78 Query: 488 WQVKSAILSTLTIIIAKGGLALKP 559 +++ + T+T+ GGLA P Sbjct: 79 MMIRAGLAMTITM----GGLAFVP 98
>ECM29_PONPY (Q5R6J0) Proteasome-associated protein ECM29 homolog (Ecm29)| (Fragment) Length = 1810 Score = 30.8 bits (68), Expect = 3.7 Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 3/106 (2%) Frame = +2 Query: 344 LISGSAETKEQAAEGLG---ELIDVTSEKTLREVVVPITGPLIRILGDRFPWQVKSAILS 514 + G A K +GL EL + S+ + ++V + + W + Sbjct: 1013 VFQGGALGKTPDGQGLSTYKELCSLASDLSQPDLVYKF----MNLANHHAMWNSRKGAAF 1068 Query: 515 TLTIIIAKGGLALKPFLPQLQTTFVKCLQDSNRSVRTRARISSWKA 652 +I + G L PFLPQL + D N +R +A S W A Sbjct: 1069 GFNVIATRAGEQLAPFLPQLVPRLYRYQFDPNLGIR-QAMTSIWNA 1113
>ECM29_MOUSE (Q6PDI5) Proteasome-associated protein ECM29 homolog (Ecm29)| Length = 1840 Score = 30.8 bits (68), Expect = 3.7 Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 8/107 (7%) Frame = +2 Query: 356 SAETKEQAAEGLGELID---VTSEKTLREVVVPITGP-----LIRILGDRFPWQVKSAIL 511 S ET GLG+ D +++ K L + ++ P + + W + Sbjct: 1038 SGETVVFQGGGLGKTPDGQGLSTYKELCSLASDLSQPDLVYKFMNLANHHAMWNSRKGAA 1097 Query: 512 STLTIIIAKGGLALKPFLPQLQTTFVKCLQDSNRSVRTRARISSWKA 652 +I + G L PFLPQL + D N +R +A S W A Sbjct: 1098 FGFNVIATRAGEQLAPFLPQLVPRLYRYQFDPNLGIR-QAMTSIWNA 1143
>ECM29_HUMAN (Q5VYK3) Proteasome-associated protein ECM29 homolog (Ecm29)| Length = 1845 Score = 30.8 bits (68), Expect = 3.7 Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 3/106 (2%) Frame = +2 Query: 344 LISGSAETKEQAAEGLG---ELIDVTSEKTLREVVVPITGPLIRILGDRFPWQVKSAILS 514 + G A K +GL EL + S+ + ++V + + W + Sbjct: 1048 VFQGGALGKTPDGQGLSTYKELCSLASDLSQPDLVYKF----MNLANHHAMWNSRKGAAF 1103 Query: 515 TLTIIIAKGGLALKPFLPQLQTTFVKCLQDSNRSVRTRARISSWKA 652 +I + G L PFLPQL + D N +R +A S W A Sbjct: 1104 GFNVIATRAGEQLAPFLPQLVPRLYRYQFDPNLGIR-QAMTSIWNA 1148
>SMRC1_MOUSE (P97496) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily C member 1 (SWI/SNF complex 155 kDa subunit) (BRG1-associated factor 155) (SWI3-related protein) Length = 1104 Score = 30.0 bits (66), Expect = 6.3 Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 4/50 (8%) Frame = +2 Query: 92 MMSILITLLSDTD----NATVLAAWEAFSRVVGSVPKEQLPTHIKLVRDA 229 +MS + L S D +A AA E FSRV VP E + H+K V++A Sbjct: 694 VMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPLELVEAHVKKVQEA 743
>SMRC1_HUMAN (Q92922) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily C member 1 (SWI/SNF complex 155 kDa subunit) (BRG1-associated factor 155) Length = 1105 Score = 30.0 bits (66), Expect = 6.3 Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 4/50 (8%) Frame = +2 Query: 92 MMSILITLLSDTD----NATVLAAWEAFSRVVGSVPKEQLPTHIKLVRDA 229 +MS + L S D +A AA E FSRV VP E + H+K V++A Sbjct: 695 VMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPLELVEAHVKKVQEA 744
>COPB2_DROME (O62621) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)| Length = 914 Score = 30.0 bits (66), Expect = 6.3 Identities = 15/55 (27%), Positives = 34/55 (61%), Gaps = 1/55 (1%) Frame = +2 Query: 32 YLIGFLFKNSKLYLADEAPDMMSILITL-LSDTDNATVLAAWEAFSRVVGSVPKE 193 YL+G++ K++++YL D+ +++S + L + + A + +E V+ ++PKE Sbjct: 564 YLLGYVPKDNRIYLGDKELNVISFCLQLSVLEYQTAVMRRDFERADVVLPTIPKE 618 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 92,227,394 Number of Sequences: 219361 Number of extensions: 1844488 Number of successful extensions: 4946 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 4765 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4942 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6200242422 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
