| Clone Name | bags32m09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT008972.1| Triticum aestivum clone wdk1c.pk024.f3:fis, full insert mRNA sequence Length = 1788 Score = 995 bits (502), Expect = 0.0 Identities = 562/582 (96%) Strand = Plus / Plus Query: 49 gatggacagccataattcatcaccgccccatgttccggaagtaaccatggacatctcatc 108 |||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||| Sbjct: 250 gatggacagccataattctacgtcgccccatgttcctgaagtaaccatggacatctcatc 309 Query: 109 cgtttctggagcagctgggaacaaagtttgcagaggtgctgcttgcgacttttctgatgc 168 || ||||||||||||||||||||||| |||||||||||||||||||||||| ||||| || Sbjct: 310 cgcttctggagcagctgggaacaaagcttgcagaggtgctgcttgcgacttctctgacgc 369 Query: 169 cggtaacacctcgaaagattcaaaggagaggtctgcatccatgaagaagctcctaattgc 228 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 370 cagtaacacctcgaaagattcaaaggagaggtctgcatccatgaagaagctcctaattgc 429 Query: 229 tgtgatcctttgtgttatattcatggcggttgaagtggttggaggcatcaaagcaaacag 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 430 tgtgatcctttgtgttatattcatggcggttgaagtggttggaggcatcaaagcaaacag 489 Query: 289 tcttgcaatcttgactgatgctgcccatctcctttcggatgttgcagcatttgccatatc 348 ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 490 tcttgcaatcttgactgatgctgcccatctcctttcgtatgttgcagcctttgccatatc 549 Query: 349 tttgttctccctatgggcagctggttgggaagcgacacctcagcagtcatatggattttt 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 550 tttgttctccctatgggcagctggttgggaagcgacacctcagcagtcatatggattttt 609 Query: 409 ccgtatagagattcttggggcattggtttccattcagcttatatggctccttgctggcat 468 ||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||| Sbjct: 610 ccgcatagagattcttggggcactggtttccattcagcttatatggctcctcgctggcat 669 Query: 469 acttgtctacgaagctattatgaggctcctcaatgaaagtggagaggtacagggctccct 528 |||||||||||||||||||||||||||| | |||||||| || ||||||||||||||||| Sbjct: 670 acttgtctacgaagctattatgaggctcattaatgaaagcggcgaggtacagggctccct 729 Query: 529 catgtttgctgtatcagcttttggtttgtttgttaacatcataatggcagtgttgcttgg 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 730 catgtttgctgtatcagcttttggtttgtttgttaacatcataatggcagtgttgcttgg 789 Query: 589 tcatgaccatgggcacggtggacatgggcacagccatggtca 630 ||||||||||||||||||||||||||| |||||||||||||| Sbjct: 790 tcatgaccatgggcacggtggacatggacacagccatggtca 831
>gb|AC130598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0056I11, complete sequence Length = 145796 Score = 535 bits (270), Expect = e-149 Identities = 485/556 (87%), Gaps = 3/556 (0%) Strand = Plus / Minus Query: 48 agatggacagccataattcatcaccgccccatgttccggaagtaaccatggacatctcat 107 |||||||||||||||| ||| |||| ||||| || | ||||| | ||||||||||||| Sbjct: 68937 agatggacagccataactcagcacctccccagattgctgaagtgagaatggacatctcat 68878 Query: 108 ccgtt---tctggagcagctgggaacaaagtttgcagaggtgctgcttgcgacttttctg 164 | | |||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 68877 catctacttctgtagcagctgggaacaaagtttgcagaggtgctgcttgtgacttttctg 68818 Query: 165 atgccggtaacacctcgaaagattcaaaggagaggtctgcatccatgaagaagctcctaa 224 || || |||| | ||| |||||| ||| |||||| || || |||| ||||||| | | Sbjct: 68817 attccagtaatagctcaaaagatgcaagggagagaatggcgtcaatgaggaagctcatta 68758 Query: 225 ttgctgtgatcctttgtgttatattcatggcggttgaagtggttggaggcatcaaagcaa 284 |||||||||||||||| | |||||||||||||| |||||||||||||| |||||||||| Sbjct: 68757 ttgctgtgatcctttgcatcatattcatggcggtcgaagtggttggaggtatcaaagcaa 68698 Query: 285 acagtcttgcaatcttgactgatgctgcccatctcctttcggatgttgcagcatttgcca 344 ||||| | ||||||||||||||||| ||||||||||||||||||||||| || ||||||| Sbjct: 68697 acagtttggcaatcttgactgatgcagcccatctcctttcggatgttgcggcctttgcca 68638 Query: 345 tatctttgttctccctatgggcagctggttgggaagcgacacctcagcagtcatatggat 404 ||||||||||||| || ||||||||||| |||||||| ||||| |||||||||||||| | Sbjct: 68637 tatctttgttctctctttgggcagctggatgggaagctacaccacagcagtcatatgggt 68578 Query: 405 ttttccgtatagagattcttggggcattggtttccattcagcttatatggctccttgctg 464 ||||||||||||| |||||||| || ||||||| |||||||| |||||||||||||||| Sbjct: 68577 ttttccgtatagaaattcttggtgccctggtttctattcagctcatatggctccttgctg 68518 Query: 465 gcatacttgtctacgaagctattatgaggctcctcaatgaaagtggagaggtacagggct 524 | || |||||||| ||||||||| | |||||| | ||||||||||| ||||| ||||||| Sbjct: 68517 gtattcttgtctatgaagctattgtaaggctcattaatgaaagtggtgaggtccagggct 68458 Query: 525 ccctcatgtttgctgtatcagcttttggtttgtttgttaacatcataatggcagtgttgc 584 |||||||||||||||| ||||| ||||| || |||||||||||||||||||| || |||| Sbjct: 68457 ccctcatgtttgctgtctcagcatttggcttatttgttaacatcataatggctgtcttgc 68398 Query: 585 ttggtcatgaccatgg 600 |||||||||||||||| Sbjct: 68397 ttggtcatgaccatgg 68382
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 535 bits (270), Expect = e-149 Identities = 485/556 (87%), Gaps = 3/556 (0%) Strand = Plus / Minus Query: 48 agatggacagccataattcatcaccgccccatgttccggaagtaaccatggacatctcat 107 |||||||||||||||| ||| |||| ||||| || | ||||| | ||||||||||||| Sbjct: 1616777 agatggacagccataactcagcacctccccagattgctgaagtgagaatggacatctcat 1616718 Query: 108 ccgtt---tctggagcagctgggaacaaagtttgcagaggtgctgcttgcgacttttctg 164 | | |||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1616717 catctacttctgtagcagctgggaacaaagtttgcagaggtgctgcttgtgacttttctg 1616658 Query: 165 atgccggtaacacctcgaaagattcaaaggagaggtctgcatccatgaagaagctcctaa 224 || || |||| | ||| |||||| ||| |||||| || || |||| ||||||| | | Sbjct: 1616657 attccagtaatagctcaaaagatgcaagggagagaatggcgtcaatgaggaagctcatta 1616598 Query: 225 ttgctgtgatcctttgtgttatattcatggcggttgaagtggttggaggcatcaaagcaa 284 |||||||||||||||| | |||||||||||||| |||||||||||||| |||||||||| Sbjct: 1616597 ttgctgtgatcctttgcatcatattcatggcggtcgaagtggttggaggtatcaaagcaa 1616538 Query: 285 acagtcttgcaatcttgactgatgctgcccatctcctttcggatgttgcagcatttgcca 344 ||||| | ||||||||||||||||| ||||||||||||||||||||||| || ||||||| Sbjct: 1616537 acagtttggcaatcttgactgatgcagcccatctcctttcggatgttgcggcctttgcca 1616478 Query: 345 tatctttgttctccctatgggcagctggttgggaagcgacacctcagcagtcatatggat 404 ||||||||||||| || ||||||||||| |||||||| ||||| |||||||||||||| | Sbjct: 1616477 tatctttgttctctctttgggcagctggatgggaagctacaccacagcagtcatatgggt 1616418 Query: 405 ttttccgtatagagattcttggggcattggtttccattcagcttatatggctccttgctg 464 ||||||||||||| |||||||| || ||||||| |||||||| |||||||||||||||| Sbjct: 1616417 ttttccgtatagaaattcttggtgccctggtttctattcagctcatatggctccttgctg 1616358 Query: 465 gcatacttgtctacgaagctattatgaggctcctcaatgaaagtggagaggtacagggct 524 | || |||||||| ||||||||| | |||||| | ||||||||||| ||||| ||||||| Sbjct: 1616357 gtattcttgtctatgaagctattgtaaggctcattaatgaaagtggtgaggtccagggct 1616298 Query: 525 ccctcatgtttgctgtatcagcttttggtttgtttgttaacatcataatggcagtgttgc 584 |||||||||||||||| ||||| ||||| || |||||||||||||||||||| || |||| Sbjct: 1616297 ccctcatgtttgctgtctcagcatttggcttatttgttaacatcataatggctgtcttgc 1616238 Query: 585 ttggtcatgaccatgg 600 |||||||||||||||| Sbjct: 1616237 ttggtcatgaccatgg 1616222
>dbj|AK100735.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023117P18, full insert sequence Length = 1813 Score = 535 bits (270), Expect = e-149 Identities = 485/556 (87%), Gaps = 3/556 (0%) Strand = Plus / Plus Query: 48 agatggacagccataattcatcaccgccccatgttccggaagtaaccatggacatctcat 107 |||||||||||||||| ||| |||| ||||| || | ||||| | ||||||||||||| Sbjct: 132 agatggacagccataactcagcacctccccagattgctgaagtgagaatggacatctcat 191 Query: 108 ccgtt---tctggagcagctgggaacaaagtttgcagaggtgctgcttgcgacttttctg 164 | | |||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 192 catctacttctgtagcagctgggaacaaagtttgcagaggtgctgcttgtgacttttctg 251 Query: 165 atgccggtaacacctcgaaagattcaaaggagaggtctgcatccatgaagaagctcctaa 224 || || |||| | ||| |||||| ||| |||||| || || |||| ||||||| | | Sbjct: 252 attccagtaatagctcaaaagatgcaagggagagaatggcgtcaatgaggaagctcatta 311 Query: 225 ttgctgtgatcctttgtgttatattcatggcggttgaagtggttggaggcatcaaagcaa 284 |||||||||||||||| | |||||||||||||| |||||||||||||| |||||||||| Sbjct: 312 ttgctgtgatcctttgcatcatattcatggcggtcgaagtggttggaggtatcaaagcaa 371 Query: 285 acagtcttgcaatcttgactgatgctgcccatctcctttcggatgttgcagcatttgcca 344 ||||| | ||||||||||||||||| ||||||||||||||||||||||| || ||||||| Sbjct: 372 acagtttggcaatcttgactgatgcagcccatctcctttcggatgttgcggcctttgcca 431 Query: 345 tatctttgttctccctatgggcagctggttgggaagcgacacctcagcagtcatatggat 404 ||||||||||||| || ||||||||||| |||||||| ||||| |||||||||||||| | Sbjct: 432 tatctttgttctctctttgggcagctggatgggaagctacaccacagcagtcatatgggt 491 Query: 405 ttttccgtatagagattcttggggcattggtttccattcagcttatatggctccttgctg 464 ||||||||||||| |||||||| || ||||||| |||||||| |||||||||||||||| Sbjct: 492 ttttccgtatagaaattcttggtgccctggtttctattcagctcatatggctccttgctg 551 Query: 465 gcatacttgtctacgaagctattatgaggctcctcaatgaaagtggagaggtacagggct 524 | || |||||||| ||||||||| | |||||| | ||||||||||| ||||| ||||||| Sbjct: 552 gtattcttgtctatgaagctattgtaaggctcattaatgaaagtggtgaggtccagggct 611 Query: 525 ccctcatgtttgctgtatcagcttttggtttgtttgttaacatcataatggcagtgttgc 584 |||||||||||||||| ||||| ||||| || |||||||||||||||||||| || |||| Sbjct: 612 ccctcatgtttgctgtctcagcatttggcttatttgttaacatcataatggctgtcttgc 671 Query: 585 ttggtcatgaccatgg 600 |||||||||||||||| Sbjct: 672 ttggtcatgaccatgg 687
>gb|AY266290.1| Oryza sativa (japonica cultivar-group) zinc transporter (OZT) mRNA, complete cds Length = 1685 Score = 519 bits (262), Expect = e-144 Identities = 483/556 (86%), Gaps = 3/556 (0%) Strand = Plus / Plus Query: 48 agatggacagccataattcatcaccgccccatgttccggaagtaaccatggacatctcat 107 |||||||||||||||| ||| |||| ||||| || | ||||| | ||||||||||||| Sbjct: 1 agatggacagccataactcagcacctccccagattgctgaagtgagaatggacatctcat 60 Query: 108 ccgtt---tctggagcagctgggaacaaagtttgcagaggtgctgcttgcgacttttctg 164 | | |||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 61 catctacttctgtagcagctgggaacaaagtttgcagaggtgctgcttgtgacttttctg 120 Query: 165 atgccggtaacacctcgaaagattcaaaggagaggtctgcatccatgaagaagctcctaa 224 || || |||| | ||| |||||| ||| |||||| || || ||| ||||||| | | Sbjct: 121 attccagtaatagctcaaaagatgcaagggagagaatggcgtcactgaggaagctcatta 180 Query: 225 ttgctgtgatcctttgtgttatattcatggcggttgaagtggttggaggcatcaaagcaa 284 |||||||||||||||| | |||||||||||||| |||||||||||||| |||||||||| Sbjct: 181 ttgctgtgatcctttgcatcatattcatggcggtcgaagtggttggaggtatcaaagcaa 240 Query: 285 acagtcttgcaatcttgactgatgctgcccatctcctttcggatgttgcagcatttgcca 344 ||||| | ||||||||||||||||| ||||||||||||||||||||||| || ||||||| Sbjct: 241 acagtttggcaatcttgactgatgcagcccatctcctttcggatgttgcggcctttgcca 300 Query: 345 tatctttgttctccctatgggcagctggttgggaagcgacacctcagcagtcatatggat 404 ||||||||||||| || ||||||||||| |||||||| ||||| |||||||||||||| | Sbjct: 301 tatctttgttctctctttgggcagctggatgggaagctacaccacagcagtcatatgggt 360 Query: 405 ttttccgtatagagattcttggggcattggtttccattcagcttatatggctccttgctg 464 ||||||||||||| |||||||| || ||||||| |||||||| |||||||||||||||| Sbjct: 361 ttttccgtatagaaattcttggtgccctggtttctattcagctcatatggctccttgctg 420 Query: 465 gcatacttgtctacgaagctattatgaggctcctcaatgaaagtggagaggtacagggct 524 | || |||||||| ||||||||| | |||||| | ||||||||||| ||||| ||||||| Sbjct: 421 gtattcttgtctatgaagctattgtaaggctcattaatgaaagtggtgaggtccagggct 480 Query: 525 ccctcatgtttgctgtatcagcttttggtttgtttgttaacatcataatggcagtgttgc 584 |||||||||||||||| ||||| || || || |||||||||||||||||||| || |||| Sbjct: 481 ccctcatgtttgctgtctcagcattcggcttatttgttaacatcataatggctgtcttgc 540 Query: 585 ttggtcatgaccatgg 600 |||||||||||||||| Sbjct: 541 ttggtcatgaccatgg 556
>gb|BT018305.1| Zea mays clone EL01T0206F07.c mRNA sequence Length = 1414 Score = 268 bits (135), Expect = 2e-68 Identities = 285/335 (85%) Strand = Plus / Plus Query: 272 ggcatcaaagcaaacagtcttgcaatcttgactgatgctgcccatctcctttcggatgtt 331 ||||||||||||||||||||||| ||||| |||||||| || || || ||||| ||||| Sbjct: 9 ggcatcaaagcaaacagtcttgccatcttaactgatgcggcgcaccttctttctgatgtg 68 Query: 332 gcagcatttgccatatctttgttctccctatgggcagctggttgggaagcgacacctcag 391 ||||||||||||||||| || ||||| || ||||| ||||| |||||||| ||||| ||| Sbjct: 69 gcagcatttgccatatcgttattctctctctgggctgctggatgggaagcaacaccgcag 128 Query: 392 cagtcatatggatttttccgtatagagattcttggggcattggtttccattcagcttata 451 ||||||||||| || ||||| || ||||||||||| || ||||| ||||||||||| ||| Sbjct: 129 cagtcatatgggttcttccggattgagattcttggtgccttggtctccattcagctcata 188 Query: 452 tggctccttgctggcatacttgtctacgaagctattatgaggctcctcaatgaaagtgga 511 ||||| |||||||||||||| || || || |||||| | |||||| | || || ||||| Sbjct: 189 tggctacttgctggcatactggtatatgaggctattgtaaggctcattaacgagagtggc 248 Query: 512 gaggtacagggctccctcatgtttgctgtatcagcttttggtttgtttgttaacatcata 571 || || ||||||||||||||||||||||| || || ||||| ||||||| ||||| ||| Sbjct: 249 gatgtgcagggctccctcatgtttgctgtgtcggcgtttggactgtttgtcaacattata 308 Query: 572 atggcagtgttgcttggtcatgaccatgggcacgg 606 ||||| || ||||| || |||||||| |||||||| Sbjct: 309 atggctgtattgctaggccatgaccacgggcacgg 343
>dbj|AP006637.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT47I16, TM0208b, complete sequence Length = 33484 Score = 168 bits (85), Expect = 1e-38 Identities = 196/233 (84%) Strand = Plus / Plus Query: 233 atcctttgtgttatattcatggcggttgaagtggttggaggcatcaaagcaaacagtctt 292 |||||||||||||| |||||| | |||||||| ||||| ||||||||||| ||||||||| Sbjct: 15344 atcctttgtgttattttcatgaccgttgaagtagttggtggcatcaaagctaacagtctt 15403 Query: 293 gcaatcttgactgatgctgcccatctcctttcggatgttgcagcatttgccatatctttg 352 ||||| |||||||||||||| ||| | ||||| |||||||||||||||||||| || || Sbjct: 15404 gcaatattgactgatgctgcacatttgctttcagatgttgcagcatttgccatctcctta 15463 Query: 353 ttctccctatgggcagctggttgggaagcgacacctcagcagtcatatggatttttccgt 412 || || ||||||| || || |||||||| | || | |||||||||||||||||| | Sbjct: 15464 ttttctttatgggctgcaggatgggaagctaatccccgtcagtcatatggatttttcaga 15523 Query: 413 atagagattcttggggcattggtttccattcagcttatatggctccttgctgg 465 |||||||||||||| || ||||||| || || | |||||||| |||||||| Sbjct: 15524 atagagattcttggtgctctggtttctatccaattaatatggctgcttgctgg 15576
>gb|AY450453.1| Populus balsamifera subsp. trichocarpa x Populus deltoides metal tolerance protein 1 (MTP1) mRNA, complete cds Length = 1182 Score = 111 bits (56), Expect = 3e-21 Identities = 146/176 (82%) Strand = Plus / Plus Query: 272 ggcatcaaagcaaacagtcttgcaatcttgactgatgctgcccatctcctttcggatgtt 331 |||||| |||| || ||||| |||||||||||||||||||| ||| | ||||| |||||| Sbjct: 223 ggcatcgaagctaatagtctggcaatcttgactgatgctgcacatttgctttcagatgtt 282 Query: 332 gcagcatttgccatatctttgttctccctatgggcagctggttgggaagcgacacctcag 391 |||| ||||| || || ||||| || ||||||||||||| |||||||| ||||| | Sbjct: 283 gcaggctttgctatctccttgttttctttatgggcagctggctgggaagccacaccccgc 342 Query: 392 cagtcatatggatttttccgtatagagattcttggggcattggtttccattcagct 447 || || ||||||||||| | || |||||||| || |||||||||||||| ||||| Sbjct: 343 caatcttatggattttttaggattgagattctcggtgcattggtttccatgcagct 398
>gb|AC130275.16| Medicago truncatula clone mth1-63a17, complete sequence Length = 90599 Score = 103 bits (52), Expect = 7e-19 Identities = 199/248 (80%) Strand = Plus / Minus Query: 236 ctttgtgttatattcatggcggttgaagtggttggaggcatcaaagcaaacagtcttgca 295 ||||| ||||| |||||||| ||||| || ||||| || || || || |||||||||||| Sbjct: 32629 ctttgcgttattttcatggccgttgaggtagttggtggtattaaggccaacagtcttgca 32570 Query: 296 atcttgactgatgctgcccatctcctttcggatgttgcagcatttgccatatctttgttc 355 || ||||||||||| || ||| | ||||| |||||||||||||||||||| || || || Sbjct: 32569 atattgactgatgcagcacatttgctttcagatgttgcagcatttgccatctccttattt 32510 Query: 356 tccctatgggcagctggttgggaagcgacacctcagcagtcatatggatttttccgtata 415 || | ||||| | || |||||| | | |||| ||||| | ||||||||| || ||| Sbjct: 32509 tctatttgggctggaggatgggaaccaaatcctcgtcagtcgtttggattttttcgaata 32450 Query: 416 gagattcttggggcattggtttccattcagcttatatggctccttgctggcatacttgtc 475 ||||||||||| || |||||||| || || | |||||||| |||||||| || ||||| Sbjct: 32449 gagattcttggtgctttggtttctatgcaattaatatggctgcttgctgggattcttgta 32390 Query: 476 tacgaagc 483 || ||||| Sbjct: 32389 tatgaagc 32382
>dbj|AP004939.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT17M09, TM0105, complete sequence Length = 127990 Score = 103 bits (52), Expect = 7e-19 Identities = 187/232 (80%) Strand = Plus / Minus Query: 234 tcctttgtgttatattcatggcggttgaagtggttggaggcatcaaagcaaacagtcttg 293 |||| |||||||| |||||| ||||| || || || |||||||| || || || |||| Sbjct: 12065 tcctctgtgttattttcatgagtgttgaggtagtcggtggcatcaaggctaatagccttg 12006 Query: 294 caatcttgactgatgctgcccatctcctttcggatgttgcagcatttgccatatctttgt 353 | || ||||||||||| |||||| | ||||| ||||||||||||||| |||| || |||| Sbjct: 12005 cgattttgactgatgcagcccatttgctttcagatgttgcagcattttccatctccttgt 11946 Query: 354 tctccctatgggcagctggttgggaagcgacacctcagcagtcatatggatttttccgta 413 | || ||||||| || || ||||| || | |||| || ||||||||||||||| | | Sbjct: 11945 tttcattatgggctgcagggtgggatgccaatcctcgccaatcatatggatttttcagaa 11886 Query: 414 tagagattcttggggcattggtttccattcagcttatatggctccttgctgg 465 |||||||| | || || |||||||| |||||||| |||||| | |||||||| Sbjct: 11885 tagagattttgggtgctttggtttctattcagctaatatggttgcttgctgg 11834
>dbj|AB201239.1| Nicotiana glauca mRNA for NGMTP1, complete cds Length = 1257 Score = 91.7 bits (46), Expect = 3e-15 Identities = 166/206 (80%) Strand = Plus / Plus Query: 278 aaagcaaacagtcttgcaatcttgactgatgctgcccatctcctttcggatgttgcagca 337 ||||| |||||||||||||| ||||| ||||| || ||||| || |||||||||||||| Sbjct: 223 aaagccaacagtcttgcaattttgacagatgccgctcatctactgtcggatgttgcagct 282 Query: 338 tttgccatatctttgttctccctatgggcagctggttgggaagcgacacctcagcagtca 397 ||||| ||||| ||||| || || |||||||| || |||||||| | || | ||||| Sbjct: 283 tttgcaatatccttgttttcactctgggcagcaggatgggaagctaatccacgccagtcc 342 Query: 398 tatggatttttccgtatagagattcttggggcattggtttccattcagcttatatggctc 457 ||||| |||||| | || ||||| || |||||||| ||||| || || | |||||||| Sbjct: 343 tatgggtttttcagaatcgagatactcggggcattagtttctatccaaatgatatggctt 402 Query: 458 cttgctggcatacttgtctacgaagc 483 || ||||| || ||||| || ||||| Sbjct: 403 ctagctgggatccttgtttatgaagc 428
>dbj|AB201241.1| Nicotiana tabacum mRNA for NTMTP1B, complete cds Length = 1257 Score = 85.7 bits (43), Expect = 2e-13 Identities = 190/239 (79%) Strand = Plus / Plus Query: 245 atattcatggcggttgaagtggttggaggcatcaaagcaaacagtcttgcaatcttgact 304 ||||| ||||| ||||| || ||||| || || ||||| |||||||| ||||| ||||| Sbjct: 190 atatttatggctgttgaggttgttggtggtattaaagccaacagtctggcaatattgacc 249 Query: 305 gatgctgcccatctcctttcggatgttgcagcatttgccatatctttgttctccctatgg 364 || ||||| ||||| || || ||||||||||| ||||| ||||| ||||| || || ||| Sbjct: 250 gacgctgctcatctactatcagatgttgcagcttttgcaatatccttgttttcactctgg 309 Query: 365 gcagctggttgggaagcgacacctcagcagtcatatggatttttccgtatagagattctt 424 ||||| || |||||||| | || | ||||| ||||| |||||| | || ||||| || Sbjct: 310 gcagcaggatgggaagctaatccacgccagtcctatgggtttttcagaatcgagatactc 369 Query: 425 ggggcattggtttccattcagcttatatggctccttgctggcatacttgtctacgaagc 483 |||||||| ||||| || || | |||||||| || ||||| || ||||| || ||||| Sbjct: 370 ggggcattagtttctatccaaatgatatggcttctagctgggatccttgtttatgaagc 428
>dbj|AB201240.1| Nicotiana tabacum mRNA for NTMTP1A, complete cds Length = 1257 Score = 75.8 bits (38), Expect = 2e-10 Identities = 164/206 (79%) Strand = Plus / Plus Query: 278 aaagcaaacagtcttgcaatcttgactgatgctgcccatctcctttcggatgttgcagca 337 ||||| |||||||| ||||| ||||| || ||||| ||||| || || ||||||||||| Sbjct: 223 aaagccaacagtctggcaatattgacagacgctgctcatctactatcagatgttgcagct 282 Query: 338 tttgccatatctttgttctccctatgggcagctggttgggaagcgacacctcagcagtca 397 ||||| ||||| ||||| || || |||||||| || |||||||| | || | ||||| Sbjct: 283 tttgcaatatccttgttttcactctgggcagcaggatgggaagctaatccacgccagtcc 342 Query: 398 tatggatttttccgtatagagattcttggggcattggtttccattcagcttatatggctc 457 ||||| |||||| | || ||||| || |||||||| ||||| || || | |||||||| Sbjct: 343 tatgggtttttcagaatcgagatactcggggcattagtttctatccaaatgatatggctt 402 Query: 458 cttgctggcatacttgtctacgaagc 483 || ||||| || ||||| || ||||| Sbjct: 403 ctagctgggatccttgtttatgaagc 428
>ref|NM_202727.1| Arabidopsis thaliana MTPA2; efflux permease/ zinc ion transporter AT3G58810 (MTPA2) transcript variant AT3G58810.2 mRNA, complete cds Length = 1924 Score = 69.9 bits (35), Expect = 1e-08 Identities = 134/167 (80%) Strand = Plus / Plus Query: 260 gaagtggttggaggcatcaaagcaaacagtcttgcaatcttgactgatgctgcccatctc 319 ||||| |||||||| ||||| || ||||||||||| || | || ||||| || ||||| Sbjct: 847 gaagtcgttggaggaatcaaggccaacagtcttgcgattctcacagatgcagctcatctg 906 Query: 320 ctttcggatgttgcagcatttgccatatctttgttctccctatgggcagctggttgggaa 379 | || ||||||||||| ||||| |||||||||||||| || ||||| | || ||| | Sbjct: 907 ttatctgatgttgcagcctttgcaatatctttgttctcgctctgggcttcgggatggaag 966 Query: 380 gcgacacctcagcagtcatatggatttttccgtatagagattcttgg 426 || | |||||||| || ||||| |||||| | |||||||||||||| Sbjct: 967 gcaaaccctcagcaatcttatgggtttttcagaatagagattcttgg 1013
>ref|NM_115743.3| Arabidopsis thaliana MTPA2; efflux permease/ zinc ion transporter AT3G58810 (MTPA2) transcript variant AT3G58810.1 mRNA, complete cds Length = 2041 Score = 69.9 bits (35), Expect = 1e-08 Identities = 134/167 (80%) Strand = Plus / Plus Query: 260 gaagtggttggaggcatcaaagcaaacagtcttgcaatcttgactgatgctgcccatctc 319 ||||| |||||||| ||||| || ||||||||||| || | || ||||| || ||||| Sbjct: 964 gaagtcgttggaggaatcaaggccaacagtcttgcgattctcacagatgcagctcatctg 1023 Query: 320 ctttcggatgttgcagcatttgccatatctttgttctccctatgggcagctggttgggaa 379 | || ||||||||||| ||||| |||||||||||||| || ||||| | || ||| | Sbjct: 1024 ttatctgatgttgcagcctttgcaatatctttgttctcgctctgggcttcgggatggaag 1083 Query: 380 gcgacacctcagcagtcatatggatttttccgtatagagattcttgg 426 || | |||||||| || ||||| |||||| | |||||||||||||| Sbjct: 1084 gcaaaccctcagcaatcttatgggtttttcagaatagagattcttgg 1130
>emb|AL353032.1|ATT20N10 Arabidopsis thaliana DNA chromosome 3, BAC clone T20N10 Length = 90273 Score = 69.9 bits (35), Expect = 1e-08 Identities = 134/167 (80%) Strand = Plus / Plus Query: 260 gaagtggttggaggcatcaaagcaaacagtcttgcaatcttgactgatgctgcccatctc 319 ||||| |||||||| ||||| || ||||||||||| || | || ||||| || ||||| Sbjct: 50784 gaagtcgttggaggaatcaaggccaacagtcttgcgattctcacagatgcagctcatctg 50843 Query: 320 ctttcggatgttgcagcatttgccatatctttgttctccctatgggcagctggttgggaa 379 | || ||||||||||| ||||| |||||||||||||| || ||||| | || ||| | Sbjct: 50844 ttatctgatgttgcagcctttgcaatatctttgttctcgctctgggcttcgggatggaag 50903 Query: 380 gcgacacctcagcagtcatatggatttttccgtatagagattcttgg 426 || | |||||||| || ||||| |||||| | |||||||||||||| Sbjct: 50904 gcaaaccctcagcaatcttatgggtttttcagaatagagattcttgg 50950
>gb|AY188451.1| Brassica juncea cation-efflux transporter (CET4) mRNA, complete cds Length = 1379 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 314 catctcctttcggatgttgcagcatttgccatatctttgttctccctatgggcagctggt 373 |||||||| || |||||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 398 catctcctctctgatgttgccgcctttgccatctccttgttctccctgtgggctgctggc 457 Query: 374 tgggaagcgac 384 ||||||||||| Sbjct: 458 tgggaagcgac 468
>emb|BX822173.1|CNS0A66D Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB18ZA05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1982 Score = 69.9 bits (35), Expect = 1e-08 Identities = 134/167 (80%) Strand = Plus / Plus Query: 260 gaagtggttggaggcatcaaagcaaacagtcttgcaatcttgactgatgctgcccatctc 319 ||||| |||||||| ||||| || ||||||||||| || | || ||||| || ||||| Sbjct: 964 gaagtcgttggaggaatcaaggccaacagtcttgcgattctcacagatgcagctcatctg 1023 Query: 320 ctttcggatgttgcagcatttgccatatctttgttctccctatgggcagctggttgggaa 379 | || ||||||||||| ||||| |||||||||||||| || ||||| | || ||| | Sbjct: 1024 ttatctgatgttgcagcctttgcaatatctttgttctcgctctgggcttcgggatggaag 1083 Query: 380 gcgacacctcagcagtcatatggatttttccgtatagagattcttgg 426 || | |||||||| || ||||| |||||| | |||||||||||||| Sbjct: 1084 gcaaaccctcagcaatcttatgggtttttcagaatagagattcttgg 1130
>gb|AY483145.1| Thlaspi arvense heavy metal transporter MTP1 mRNA, complete cds Length = 1191 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 329 gttgcagcatttgccatatctttgttctccctatgggcagctggttgggaagcgac 384 ||||| || |||||||| || ||||||||||| ||||| ||||||||||||||||| Sbjct: 271 gttgctgcctttgccatctccttgttctccctgtgggctgctggttgggaagcgac 326
>gb|AY187082.1| Brassica juncea cation-efflux transporter (CET1) mRNA, complete cds Length = 1481 Score = 61.9 bits (31), Expect = 2e-06 Identities = 187/239 (78%) Strand = Plus / Plus Query: 248 ttcatggcggttgaagtggttggaggcatcaaagcaaacagtcttgcaatcttgactgat 307 |||||| | |||||||| |||| ||||||||||| ||||| || || || | || || Sbjct: 420 ttcatgaccgttgaagtctttggtggcatcaaagctaacagcctagctatactcaccgac 479 Query: 308 gctgcccatctcctttcggatgttgcagcatttgccatatctttgttctccctatgggca 367 || || |||||||| || || ||||| || || ||||| || |||||||||| ||||| Sbjct: 480 gcagcgcatctcctctctgacgttgctgccttcgccatctccctgttctccctgtgggcc 539 Query: 368 gctggttgggaagcgacacctcagcagtcatatggatttttccgtatagagattcttggg 427 ||||||||||||||||| || |||| | ||||| |||||| | || |||||| | || Sbjct: 540 gctggttgggaagcgacgccgaggcagacttatggttttttcaggattgagattttggga 599 Query: 428 gcattggtttccattcagcttatatggctccttgctggcatacttgtctacgaagctat 486 || | || ||||| ||||| || |||||||| |||| || |||||||| |||||||| Sbjct: 600 gctcttgtctccatccagctcatttggctcctcactggtattcttgtctatgaagctat 658
>gb|AY483149.1| Brassica juncea heavy metal transporter MTP1 mRNA, complete cds Length = 1149 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 305 gatgctgcccatctcctttcggatgttgcagcatttgccatatctttgttctccctatgg 364 ||||| || ||||| || || |||||||| || ||||| || || ||||||||| | ||| Sbjct: 250 gatgcagcgcatcttctctctgatgttgctgcctttgctatctccttgttctccttgtgg 309 Query: 365 gcagctggttgggaagc 381 || |||||||||||||| Sbjct: 310 gctgctggttgggaagc 326
>gb|AY188449.1| Brassica juncea cation-efflux transporter (CET2) mRNA, complete cds Length = 1336 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 305 gatgctgcccatctcctttcggatgttgcagcatttgccatatctttgttctccctatgg 364 ||||| || ||||| || || |||||||| || ||||| || || ||||||||| | ||| Sbjct: 325 gatgcagcgcatcttctctctgatgttgctgcctttgctatctccttgttctccttgtgg 384 Query: 365 gcagctggttgggaagc 381 || |||||||||||||| Sbjct: 385 gctgctggttgggaagc 401
>gb|AY044454.2| Thlaspi goesingense putative vacuolar metal-ion transport protein MTP1t2 (MTP1) mRNA, complete cds; alternatively spliced Length = 1083 Score = 48.1 bits (24), Expect = 0.035 Identities = 48/56 (85%) Strand = Plus / Plus Query: 329 gttgcagcatttgccatatctttgttctccctatgggcagctggttgggaagcgac 384 ||||| || |||||||| ||| | |||||| | ||||| ||||||||||||||||| Sbjct: 271 gttgctgcctttgccatctctctcttctccttgtgggctgctggttgggaagcgac 326
>gb|AY044453.2| Thlaspi goesingense putative vacuolar metal-ion transport protein MTP1t1 (MTP1) mRNA, complete cds Length = 1179 Score = 48.1 bits (24), Expect = 0.035 Identities = 48/56 (85%) Strand = Plus / Plus Query: 329 gttgcagcatttgccatatctttgttctccctatgggcagctggttgggaagcgac 384 ||||| || |||||||| ||| | |||||| | ||||| ||||||||||||||||| Sbjct: 271 gttgctgcctttgccatctctctcttctccttgtgggctgctggttgggaagcgac 326 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Plus Query: 563 aacatcataatggcagtgttgcttggtcatgaccatgg 600 |||||||||||||| ||| ||||||| ||||| ||||| Sbjct: 505 aacatcataatggctgtgatgcttgggcatgatcatgg 542
>gb|AY044452.2| Thlaspi goesingense putative vacuolar metal-ion transport protein MTP1 (MTP1) gene, complete cds Length = 1179 Score = 48.1 bits (24), Expect = 0.035 Identities = 48/56 (85%) Strand = Plus / Plus Query: 329 gttgcagcatttgccatatctttgttctccctatgggcagctggttgggaagcgac 384 ||||| || |||||||| ||| | |||||| | ||||| ||||||||||||||||| Sbjct: 271 gttgctgcctttgccatctctctcttctccttgtgggctgctggttgggaagcgac 326 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Plus Query: 563 aacatcataatggcagtgttgcttggtcatgaccatgg 600 |||||||||||||| ||| ||||||| ||||| ||||| Sbjct: 505 aacatcataatggctgtgatgcttgggcatgatcatgg 542
>gb|AC165249.2| Mus musculus BAC clone RP24-157P13 from chromosome 12, complete sequence Length = 193902 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 424 tggggcattggtttccattcagc 446 ||||||||||||||||||||||| Sbjct: 162151 tggggcattggtttccattcagc 162173
>gb|AY560019.1| Thlaspi goesingense metal tolerance protein 1 variant c (MTP1) gene, MTP1-c allele, complete cds Length = 1191 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Plus Query: 563 aacatcataatggcagtgttgcttggtcatgaccatgg 600 |||||||||||||| ||| ||||||| ||||| ||||| Sbjct: 505 aacatcataatggctgtgatgcttgggcatgatcatgg 542 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 353 ttctccctatgggcagctggttgggaagcgac 384 |||||| | ||||| ||||||||||||||||| Sbjct: 295 ttctccttgtgggctgctggttgggaagcgac 326
>gb|AY560017.1| Thlaspi goesingense metal tolerance protein 1 variant a (MTP1) gene, MTP1-a allele, complete cds Length = 1173 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Plus Query: 563 aacatcataatggcagtgttgcttggtcatgaccatgg 600 |||||||||||||| ||| ||||||| ||||| ||||| Sbjct: 505 aacatcataatggctgtgatgcttgggcatgatcatgg 542 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 353 ttctccctatgggcagctggttgggaagcgac 384 |||||| | ||||| ||||||||||||||||| Sbjct: 295 ttctccttgtgggctgctggttgggaagcgac 326
>gb|BC013478.1| Mus musculus solute carrier family 30 (zinc transporter), member 2, mRNA (cDNA clone IMAGE:4239648), partial cds Length = 2048 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 607 tggacatgggcacagccatgg 627 ||||||||||||||||||||| Sbjct: 846 tggacatgggcacagccatgg 866
>gb|AC161471.3| Gallus gallus BAC clone CH261-21B3 from chromosome ul, complete sequence Length = 205759 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 597 atgggcacggtggacatgggc 617 ||||||||||||||||||||| Sbjct: 25183 atgggcacggtggacatgggc 25203
>gb|AC067794.5| Homo sapiens chromosome 11, clone RP11-558L11, complete sequence Length = 190489 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 tcttgcaatcttgactgatgc 309 ||||||||||||||||||||| Sbjct: 144664 tcttgcaatcttgactgatgc 144644
>gb|AC171275.2| Gallus gallus BAC clone CH261-87A5 from chromosome ul, complete sequence Length = 206820 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 597 atgggcacggtggacatgggc 617 ||||||||||||||||||||| Sbjct: 138525 atgggcacggtggacatgggc 138545
>gb|AC011471.6|AC011471 Homo sapiens chromosome 19 clone CTC-503J8, complete sequence Length = 154702 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 532 gtttgctgtatcagcttttgg 552 ||||||||||||||||||||| Sbjct: 22352 gtttgctgtatcagcttttgg 22372
>dbj|AP002336.5| Homo sapiens genomic DNA, chromosome 11 clone:CTA-797E19, complete sequence Length = 112479 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 181 gaaagattcaaaggagaggtctgca 205 |||||| |||||||||||||||||| Sbjct: 46299 gaaagagtcaaaggagaggtctgca 46275
>ref|NM_115956.2| Arabidopsis thaliana unknown protein AT3G60920 mRNA, complete cds Length = 5787 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 gggcagctggttgggaagcg 382 |||||||||||||||||||| Sbjct: 3992 gggcagctggttgggaagcg 4011
>gb|BC039818.1| Homo sapiens NMDA receptor regulated 1, mRNA (cDNA clone IMAGE:5499884), partial cds Length = 2113 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 catgtttgctgtatcagctt 548 |||||||||||||||||||| Sbjct: 2032 catgtttgctgtatcagctt 2013
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 tggtcatgaccatgggcacg 605 |||||||||||||||||||| Sbjct: 5244300 tggtcatgaccatgggcacg 5244281
>gb|AY112670.1| Homo sapiens transcriptional coactivator tubedown-100 (TBDN100) mRNA, complete cds Length = 2601 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 catgtttgctgtatcagctt 548 |||||||||||||||||||| Sbjct: 1761 catgtttgctgtatcagctt 1742
>ref|XM_874724.1| PREDICTED: Bos taurus similar to NMDA receptor regulated 1, transcript variant 5 (LOC536676), mRNA Length = 5687 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 catgtttgctgtatcagctt 548 |||||||||||||||||||| Sbjct: 2070 catgtttgctgtatcagctt 2051
>ref|XM_874639.1| PREDICTED: Bos taurus similar to NMDA receptor regulated 1, transcript variant 4 (LOC536676), mRNA Length = 5648 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 catgtttgctgtatcagctt 548 |||||||||||||||||||| Sbjct: 2085 catgtttgctgtatcagctt 2066
>ref|XM_874549.1| PREDICTED: Bos taurus similar to NMDA receptor regulated 1, transcript variant 3 (LOC536676), mRNA Length = 5642 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 catgtttgctgtatcagctt 548 |||||||||||||||||||| Sbjct: 2079 catgtttgctgtatcagctt 2060
>ref|XM_616817.2| PREDICTED: Bos taurus similar to NMDA receptor regulated 1, transcript variant 1 (LOC536676), mRNA Length = 5638 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 catgtttgctgtatcagctt 548 |||||||||||||||||||| Sbjct: 2070 catgtttgctgtatcagctt 2051
>ref|XM_864850.1| PREDICTED: Bos taurus similar to NMDA receptor regulated 1, transcript variant 2 (LOC536676), mRNA Length = 6241 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 catgtttgctgtatcagctt 548 |||||||||||||||||||| Sbjct: 2070 catgtttgctgtatcagctt 2051
>gb|AY483146.1| Thlaspi caerulescens heavy metal transporter MTP1 mRNA, complete cds Length = 1191 Score = 40.1 bits (20), Expect = 8.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 329 gttgcagcatttgccatatctttgttctccctatgggcagctggttgggaagcgac 384 ||||| || |||||||| ||| | ||| || | ||||| ||||||||||||||||| Sbjct: 271 gttgctgcctttgccatctctctcttcgccttgtgggctgctggttgggaagcgac 326
>gb|AY560018.1| Thlaspi goesingense metal tolerance protein 1 variant b (MTP1) gene, MTP1-b allele, complete cds Length = 1173 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 353 ttctccctatgggcagctggttgggaagcgac 384 |||||| | ||||| ||||||||||||||||| Sbjct: 295 ttctccttgtgggctgctggttgggaagcgac 326
>ref|NM_057175.3| Homo sapiens NMDA receptor regulated 1 (NARG1), mRNA Length = 5554 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 catgtttgctgtatcagctt 548 |||||||||||||||||||| Sbjct: 2017 catgtttgctgtatcagctt 1998
>gb|AC113979.8| Mus musculus chromosome 12, clone RP23-478I20, complete sequence Length = 172842 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 570 taatggcagtgttgcttggt 589 |||||||||||||||||||| Sbjct: 11574 taatggcagtgttgcttggt 11593
>ref|XM_540937.2| PREDICTED: Canis familiaris similar to NMDA receptor regulated 1 (LOC483817), mRNA Length = 5449 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 catgtttgctgtatcagctt 548 |||||||||||||||||||| Sbjct: 1896 catgtttgctgtatcagctt 1877
>gb|AY039242.1| Homo sapiens gastric cancer antigen Ga19 mRNA, complete cds Length = 3084 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 catgtttgctgtatcagctt 548 |||||||||||||||||||| Sbjct: 2042 catgtttgctgtatcagctt 2023
>emb|AL359199.34| Human DNA sequence from clone RP11-296A20 on chromosome 1 Contains the 5' end of the CAPZB gene for capping protein (actin filament) muscle Z-line, beta, complete sequence Length = 148290 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 aaagcaaacagtcttgcaat 297 |||||||||||||||||||| Sbjct: 11888 aaagcaaacagtcttgcaat 11907
>emb|AL358732.1|ATT27I15 Arabidopsis thaliana DNA chromosome 3, BAC clone T27I15 Length = 112584 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 gggcagctggttgggaagcg 382 |||||||||||||||||||| Sbjct: 4512 gggcagctggttgggaagcg 4493
>emb|AL732508.13| Mouse DNA sequence from clone RP23-270A11 on chromosome 4, complete sequence Length = 72254 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 548 tttggtttgtttgttaacat 567 |||||||||||||||||||| Sbjct: 14774 tttggtttgtttgttaacat 14755
>emb|AJ719892.1| Gallus gallus mRNA for hypothetical protein, clone 7o12 Length = 1794 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 cttatatggctccttgctgg 465 |||||||||||||||||||| Sbjct: 1597 cttatatggctccttgctgg 1578
>emb|AL512585.12| Mouse DNA sequence from clone RP23-236A12 on chromosome 4, complete sequence Length = 217400 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 attggtttccattcagctta 449 |||||||||||||||||||| Sbjct: 119972 attggtttccattcagctta 119953
>emb|CR861248.1| Pongo pygmaeus mRNA; cDNA DKFZp459P063 (from clone DKFZp459P063) Length = 4127 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 catgtttgctgtatcagctt 548 |||||||||||||||||||| Sbjct: 2029 catgtttgctgtatcagctt 2010
>ref|NM_001006358.1| Gallus gallus basic leucine zipper and W2 domains 2 (BZW2), mRNA Length = 1794 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 cttatatggctccttgctgg 465 |||||||||||||||||||| Sbjct: 1597 cttatatggctccttgctgg 1578
>dbj|AK023387.1| Homo sapiens cDNA FLJ13325 fis, clone OVARC1001762, weakly similar to N-TERMINAL ACETYLTRANSFERASE 1 (EC 2.3.1.88) Length = 1802 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 catgtttgctgtatcagctt 548 |||||||||||||||||||| Sbjct: 1738 catgtttgctgtatcagctt 1719
>ref|NM_142397.1| Drosophila melanogaster CG14318-RA (CG14318), mRNA Length = 4482 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 611 catgggcacagccatggtca 630 |||||||||||||||||||| Sbjct: 4153 catgggcacagccatggtca 4172
>gb|AC078871.16| Homo sapiens 12q BAC RP11-919C7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 119238 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 tcagcagtcatatggatttt 407 |||||||||||||||||||| Sbjct: 48285 tcagcagtcatatggatttt 48304
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 ccggccggccccggcgtccg 38 |||||||||||||||||||| Sbjct: 799436 ccggccggccccggcgtccg 799417
>dbj|AB168261.1| Macaca fascicularis testis cDNA clone: QtsA-10780, similar to human transcriptional coactivator tubedown-100 (TBDN100),transcript variant 1, mRNA, RefSeq: NM_057175.2 Length = 2172 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 catgtttgctgtatcagctt 548 |||||||||||||||||||| Sbjct: 2039 catgtttgctgtatcagctt 2020
>dbj|AB168212.1| Macaca fascicularis testis cDNA clone: QtsA-10544, similar to human transcriptional coactivator tubedown-100 (TBDN100),transcript variant 1, mRNA, RefSeq: NM_057175.2 Length = 2172 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 catgtttgctgtatcagctt 548 |||||||||||||||||||| Sbjct: 2084 catgtttgctgtatcagctt 2065
>emb|AL844603.5| Mouse DNA sequence from clone RP24-334I20 on chromosome 2, complete sequence Length = 144391 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 tgaggctcctcaatgaaagt 508 |||||||||||||||||||| Sbjct: 21820 tgaggctcctcaatgaaagt 21801
>gb|AF275750.1|AF275750 Thlaspi caerulescens zinc transporter (ZTP1) mRNA, complete cds Length = 1353 Score = 40.1 bits (20), Expect = 8.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 329 gttgcagcatttgccatatctttgttctccctatgggcagctggttgggaagcgac 384 ||||| || |||||||| ||| | ||| || | ||||| ||||||||||||||||| Sbjct: 321 gttgctgcctttgccatctctctcttcgccttgtgggctgctggttgggaagcgac 376
>gb|AC092219.1|AC092219 Drosophila melanogaster, chromosome 2L, region 28A-28B, BAC clone BACR13D17, complete sequence Length = 177130 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 tggaggcatcaaagcaaaca 287 |||||||||||||||||||| Sbjct: 109360 tggaggcatcaaagcaaaca 109341
>emb|BX005028.16| Zebrafish DNA sequence from clone CH211-177D23, complete sequence Length = 149509 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 520 gggctccctcatgtttgctg 539 |||||||||||||||||||| Sbjct: 56558 gggctccctcatgtttgctg 56577
>gb|AF327722.1|AF327722 Homo sapiens putative acetyltransferase mRNA, complete cds Length = 4192 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 catgtttgctgtatcagctt 548 |||||||||||||||||||| Sbjct: 2040 catgtttgctgtatcagctt 2021
>gb|AC007810.6|AC007810 Drosophila melanogaster, chromosome 3R, region 90C-90C, BAC clone BACR14A01, complete sequence Length = 176735 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 611 catgggcacagccatggtca 630 |||||||||||||||||||| Sbjct: 106056 catgggcacagccatggtca 106037
>gb|AC007811.5|AC007811 Drosophila melanogaster, chromosome 3R, region 90C-90D, BAC clone BACR45M04, complete sequence Length = 171569 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 611 catgggcacagccatggtca 630 |||||||||||||||||||| Sbjct: 28307 catgggcacagccatggtca 28288
>gb|BC093928.1| Homo sapiens NMDA receptor regulated 1, mRNA (cDNA clone MGC:120963 IMAGE:7939773), complete cds Length = 2739 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 catgtttgctgtatcagctt 548 |||||||||||||||||||| Sbjct: 1826 catgtttgctgtatcagctt 1807
>gb|AC011298.7| Homo sapiens BAC clone RP11-118M12 from 2, complete sequence Length = 174221 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 609 gacatgggcacagccatggt 628 |||||||||||||||||||| Sbjct: 77730 gacatgggcacagccatggt 77711
>gb|AC093451.25| Mus musculus strain C57BL/6J chromosome 8 clone rp23-340n2, complete sequence Length = 198760 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 cagcttttggtttgtttgtt 562 |||||||||||||||||||| Sbjct: 55637 cagcttttggtttgtttgtt 55656
>gb|AC112784.5| Homo sapiens BAC clone RP13-555N8 from 2, complete sequence Length = 196451 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 609 gacatgggcacagccatggt 628 |||||||||||||||||||| Sbjct: 122674 gacatgggcacagccatggt 122655
>gb|BC032642.1| Homo sapiens NMDA receptor regulated 1, mRNA (cDNA clone IMAGE:5495731), partial cds Length = 2124 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 catgtttgctgtatcagctt 548 |||||||||||||||||||| Sbjct: 2042 catgtttgctgtatcagctt 2023
>emb|AJ314788.1|HSA314788 Homo sapiens mRNA for putative N-acetyltransferase Length = 5505 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 catgtttgctgtatcagctt 548 |||||||||||||||||||| Sbjct: 1969 catgtttgctgtatcagctt 1950
>gb|BC104806.1| Homo sapiens NMDA receptor regulated 1, mRNA (cDNA clone MGC:132466 IMAGE:8143809), complete cds Length = 2739 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 catgtttgctgtatcagctt 548 |||||||||||||||||||| Sbjct: 1826 catgtttgctgtatcagctt 1807
>emb|BX649500.9| Zebrafish DNA sequence from clone CH211-286J13 in linkage group 4, complete sequence Length = 43749 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 tttggtttgtttgttaacat 567 |||||||||||||||||||| Sbjct: 34112 tttggtttgtttgttaacat 34131
>gb|AC153593.4| Mus musculus 6 BAC RP23-131B11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 205164 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 cagcttttggtttgtttgtt 562 |||||||||||||||||||| Sbjct: 12849 cagcttttggtttgtttgtt 12830
>gb|AE003719.3| Drosophila melanogaster chromosome 3R, section 57 of 118 of the complete sequence Length = 212941 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 611 catgggcacagccatggtca 630 |||||||||||||||||||| Sbjct: 59278 catgggcacagccatggtca 59259
>gb|AE003618.3| Drosophila melanogaster chromosome 2L, section 27 of 83 of the complete sequence Length = 268661 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 tggaggcatcaaagcaaaca 287 |||||||||||||||||||| Sbjct: 12342 tggaggcatcaaagcaaaca 12361
>gb|AC006197.1|AC006197 Homo sapiens, clone hRPK.2_A_1, complete sequence Length = 154354 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 tcagcagtcatatggatttt 407 |||||||||||||||||||| Sbjct: 109131 tcagcagtcatatggatttt 109150
>gb|AC005834.1|AC005834 Drosophila melanogaster DNA sequence (P1s DS01589 (D279), DS01529 (D280), and DS02501 (D281)), complete sequence Length = 207672 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 tggaggcatcaaagcaaaca 287 |||||||||||||||||||| Sbjct: 143268 tggaggcatcaaagcaaaca 143249
>gb|AC132443.3| Mus musculus BAC clone RP23-157C23 from 6, complete sequence Length = 179231 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 cagcttttggtttgtttgtt 562 |||||||||||||||||||| Sbjct: 51880 cagcttttggtttgtttgtt 51899
>gb|AC140276.3| Mus musculus BAC clone RP23-336J13 from 8, complete sequence Length = 211518 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 cagcttttggtttgtttgtt 562 |||||||||||||||||||| Sbjct: 141453 cagcttttggtttgtttgtt 141472
>gb|AC154662.2| Mus musculus BAC clone RP24-279F20 from chromosome 13, complete sequence Length = 170831 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 609 gacatgggcacagccatggt 628 |||||||||||||||||||| Sbjct: 113767 gacatgggcacagccatggt 113748
>gb|AC155243.2| Mus musculus BAC clone RP24-555L7 from chromosome 12, complete sequence Length = 124993 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 570 taatggcagtgttgcttggt 589 |||||||||||||||||||| Sbjct: 109215 taatggcagtgttgcttggt 109234
>gb|AY311490.1| Thlaspi caerulescens cation-efflux transporter (CET1) mRNA, complete cds Length = 1191 Score = 40.1 bits (20), Expect = 8.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 329 gttgcagcatttgccatatctttgttctccctatgggcagctggttgggaagcgac 384 ||||| || |||||||| ||| | ||| || | ||||| ||||||||||||||||| Sbjct: 271 gttgctgcctttgccatctctctcttcgccttgtgggctgctggttgggaagcgac 326 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,202,188 Number of Sequences: 3902068 Number of extensions: 6202188 Number of successful extensions: 115344 Number of sequences better than 10.0: 87 Number of HSP's better than 10.0 without gapping: 87 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 115096 Number of HSP's gapped (non-prelim): 234 length of query: 634 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 611 effective length of database: 17,143,297,704 effective search space: 10474554897144 effective search space used: 10474554897144 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)