Clone Information

BLAST Search Result

Clone Name	bags32m07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL7A_ORYSA (P35685) 60S ribosomal protein L7a	327	1e-89
2	RL7A_ARATH (P49692) 60S ribosomal protein L7a	285	5e-77
3	RL7A_RAT (P62425) 60S ribosomal protein L7a	206	4e-53
4	RL7A_MOUSE (P12970) 60S ribosomal protein L7a (Surfeit locus pro...	206	4e-53
5	RL7A_HUMAN (P62424) 60S ribosomal protein L7a (Surfeit locus pro...	206	4e-53
6	RL7A_ICTPU (Q90YW2) 60S ribosomal protein L7a	205	6e-53
7	RL7A_FUGRU (O57592) 60S ribosomal protein L7a (Surfeit locus pro...	205	6e-53
8	RL7A_DROME (P46223) 60S ribosomal protein L7a	202	4e-52
9	RL7A_CHICK (P32429) 60S ribosomal protein L7a	201	2e-51
10	RL8_SCHPO (O13672) 60S ribosomal protein L8 (L7A) (L4)	195	8e-50
11	RL8A_YEAST (P17076) 60S ribosomal protein L8-A (L7A-2) (L4-2) (Y...	186	5e-47
12	RL8B_YEAST (P29453) 60S ribosomal protein L8-B (L7A-1) (L4-1) (Y...	185	9e-47
13	RL7A_ANOGA (O76732) 60S ribosomal protein L7a	184	2e-46
14	RL7A_CAEEL (Q966C6) 60S ribosomal protein L7a	167	1e-41
15	RL7A_PIG (Q29375) 60S ribosomal protein L7a (Fragment)	131	1e-30
16	RL7A_AERPE (Q9YAX7) 50S ribosomal protein L7Ae	62	1e-09
17	RL7A_THEAC (Q9HJ56) 50S ribosomal protein L7Ae	59	7e-09
18	RL7A_PYRKO (Q5JGR3) 50S ribosomal protein L7Ae	59	9e-09
19	RL7A_PYRHO (P62009) 50S ribosomal protein L7Ae	59	9e-09
20	RL7A_PYRFU (Q8U160) 50S ribosomal protein L7Ae	59	9e-09
21	RL7A_PYRAB (P62008) 50S ribosomal protein L7Ae	59	9e-09
22	RL7A_ARCFU (O29494) 50S ribosomal protein L7Ae	59	9e-09
23	RL7A_THEVO (Q97BK8) 50S ribosomal protein L7Ae	59	9e-09
24	RL7A_PICTO (Q6KZI7) 50S ribosomal protein L7Ae	59	1e-08
25	RL7A_SULAC (Q4J8P1) 50S ribosomal protein L7Ae	58	2e-08
26	RL7A_PYRAE (Q8ZTA5) 50S ribosomal protein L7Ae	57	4e-08
27	RL7A_SULTO (Q971C9) 50S ribosomal protein L7Ae	57	5e-08
28	RL7A_SULSO (P55858) 50S ribosomal protein L7Ae	57	5e-08
29	RL7A_NANEQ (P62427) 50S ribosomal protein L7Ae	55	1e-07
30	RL7A_METTH (O26355) 50S ribosomal protein L7Ae	54	2e-07
31	RL7A_METJA (P54066) 50S ribosomal protein L7Ae	54	3e-07
32	RL7A_METKA (Q8TV03) 50S ribosomal protein L7Ae	53	5e-07
33	NHPX_DROME (Q9U3Z7) NHP2-like protein (Hoi-polloi protein)	50	6e-06
34	NHPX_CAEEL (Q21568) NHP2/L7aE family protein YEL026W homolog	49	1e-05
35	RL7A_METAC (Q8TQL9) 50S ribosomal protein L7Ae	48	2e-05
36	NOLA2_BRABE (Q8I7X7) H/ACA ribonucleoprotein complex subunit 2-l...	48	2e-05
37	NHPX_RAT (P55770) NHP2-like protein 1 (High mobility group-like ...	47	3e-05
38	NHPX_MOUSE (Q9D0T1) NHP2-like protein 1 (High mobility group-lik...	47	3e-05
39	NHPX_HUMAN (P55769) NHP2-like protein 1 (High mobility group-lik...	47	3e-05
40	RL7A_METMA (Q8PU74) 50S ribosomal protein L7Ae	47	4e-05
41	NHP2_YEAST (P32495) H/ACA ribonucleoprotein complex subunit 2 (H...	46	6e-05
42	SNU13_YEAST (P39990) 13 kDa ribonucleoprotein-associated protein	45	2e-04
43	NOLA2_MOUSE (Q9CRB2) H/ACA ribonucleoprotein complex subunit 2 (...	41	0.002
44	NOLA2_CAEBR (Q60YI3) Putative H/ACA ribonucleoprotein complex su...	41	0.002
45	NOLA2_XENTR (Q6P8C4) H/ACA ribonucleoprotein complex subunit 2-l...	41	0.003
46	NOLA2_XENLA (Q6NTV9) H/ACA ribonucleoprotein complex subunit 2-l...	41	0.003
47	NHP2_SCHPO (Q9P7H0) H/ACA ribonucleoprotein complex subunit 2 (H...	41	0.003
48	NOLA2_BOVIN (Q5E950) H/ACA ribonucleoprotein complex subunit 2 (...	40	0.003
49	NOLA2_ARATH (Q9LEY9) H/ACA ribonucleoprotein complex subunit 2-l...	40	0.003
50	NOLA2_PONPY (Q5RC65) H/ACA ribonucleoprotein complex subunit 2 (...	40	0.004
51	NOLA2_HUMAN (Q9NX24) H/ACA ribonucleoprotein complex subunit 2 (...	40	0.004
52	NOLA2_DROYA (Q6XIP0) H/ACA ribonucleoprotein complex subunit 2-l...	40	0.004
53	NOLA2_BRARE (Q6PBV6) H/ACA ribonucleoprotein complex subunit 2-l...	40	0.004
54	NOLA2_DROME (Q9V3U2) H/ACA ribonucleoprotein complex subunit 2-l...	40	0.006
55	NOLA2_CAEEL (Q9XXD4) Putative H/ACA ribonucleoprotein complex su...	40	0.006
56	RS12A_ARATH (Q9S9P1) 40S ribosomal protein S12-1	34	0.24
57	LAH1_YEAST (P33399) La protein homolog (La ribonucleoprotein) (L...	32	1.6
58	RS12_HORVU (Q9XHS0) 40S ribosomal protein S12	31	2.1
59	RS12C_ARATH (Q9SKZ3) 40S ribosomal protein S12-3	31	2.7
60	GUNA_BUTFI (P22541) Endoglucanase A precursor (EC 3.2.1.4) (Endo...	30	3.5
61	CHS5_USTMA (O13394) Chitin synthase 5 (EC 2.4.1.16) (Chitin-UDP ...	30	4.6
62	H1_CHITH (P21895) Histone H1	30	4.6
63	MAGC2_HUMAN (Q9UBF1) Melanoma-associated antigen C2 (MAGE-C2 ant...	30	6.0

>RL7A_ORYSA (P35685) 60S ribosomal protein L7a|
          Length = 258

 Score =  327 bits (839), Expect = 1e-89
 Identities = 163/185 (88%), Positives = 166/185 (89%)
 Frame = +2

Query: 2   PKRGGKAPVPAKKKTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXX 181
           PKRGG+APVPAKKKTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWP           
Sbjct: 3   PKRGGRAPVPAKKKTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRI 62

Query: 182 XXXXXXXPPALHQFTRTLDKNLATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGKTVEA 361
                  PPAL+QFTRTLDKNLATNLFKMLLKYRPEDK AKKERLLKRAQAEAEGKTVEA
Sbjct: 63  LKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPEDKAAKKERLLKRAQAEAEGKTVEA 122

Query: 362 KKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRL 541
           KKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGK+RL
Sbjct: 123 KKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKARL 182

Query: 542 GSIVH 556
           GSIVH
Sbjct: 183 GSIVH 187

to top

>RL7A_ARATH (P49692) 60S ribosomal protein L7a|
          Length = 257

 Score =  285 bits (730), Expect = 5e-77
 Identities = 144/186 (77%), Positives = 159/186 (85%), Gaps = 1/186 (0%)
 Frame = +2

Query: 2   PKRGGKAPVPAKKKT-EKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXX 178
           PK+G K  V AKKKT EKV+NPLFE+RPKQFGIGGALPPKKDL R++KWP          
Sbjct: 3   PKKGVK--VAAKKKTAEKVSNPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQKR 60

Query: 179 XXXXXXXXPPALHQFTRTLDKNLATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGKTVE 358
                   PPAL+QFT+TLDKNLAT+LFK+LLKYRPEDK AKKERL+K+AQAEAEGK  E
Sbjct: 61  ILKQRLKVPPALNQFTKTLDKNLATSLFKVLLKYRPEDKAAKKERLVKKAQAEAEGKPSE 120

Query: 359 AKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSR 538
           +KKPIVVKYGLNHVTYLIEQ+KAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSR
Sbjct: 121 SKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSR 180

Query: 539 LGSIVH 556
           LG++VH
Sbjct: 181 LGAVVH 186

to top

>RL7A_RAT (P62425) 60S ribosomal protein L7a|
          Length = 265

 Score =  206 bits (524), Expect = 4e-53
 Identities = 107/183 (58%), Positives = 129/183 (70%), Gaps = 4/183 (2%)
 Frame = +2

Query: 20  APVPA---KKKTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXX 190
           AP PA   K++ +KV NPLFEKRPK FGIG  + PK+DL RFVKWP              
Sbjct: 12  APAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYK 71

Query: 191 XXXXPPALHQFTRTLDKNLATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGK-TVEAKK 367
               PPA++QFT+ LD+  AT L K+  KYRPE K  KK+RLL RA+ +A GK  V  K+
Sbjct: 72  RLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKR 131

Query: 368 PIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGS 547
           P V++ G+N VT L+E  KAQLVVIAHDVDPIELVV+LPALCRKM VPYCI+KGK+RLG 
Sbjct: 132 PPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGR 191

Query: 548 IVH 556
           +VH
Sbjct: 192 LVH 194

to top

>RL7A_MOUSE (P12970) 60S ribosomal protein L7a (Surfeit locus protein 3)|
          Length = 265

 Score =  206 bits (524), Expect = 4e-53
 Identities = 107/183 (58%), Positives = 129/183 (70%), Gaps = 4/183 (2%)
 Frame = +2

Query: 20  APVPA---KKKTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXX 190
           AP PA   K++ +KV NPLFEKRPK FGIG  + PK+DL RFVKWP              
Sbjct: 12  APAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYK 71

Query: 191 XXXXPPALHQFTRTLDKNLATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGK-TVEAKK 367
               PPA++QFT+ LD+  AT L K+  KYRPE K  KK+RLL RA+ +A GK  V  K+
Sbjct: 72  RLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKR 131

Query: 368 PIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGS 547
           P V++ G+N VT L+E  KAQLVVIAHDVDPIELVV+LPALCRKM VPYCI+KGK+RLG 
Sbjct: 132 PPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGH 191

Query: 548 IVH 556
           +VH
Sbjct: 192 LVH 194

to top

>RL7A_HUMAN (P62424) 60S ribosomal protein L7a (Surfeit locus protein 3) (PLA-X|
           polypeptide)
          Length = 265

 Score =  206 bits (524), Expect = 4e-53
 Identities = 107/183 (58%), Positives = 129/183 (70%), Gaps = 4/183 (2%)
 Frame = +2

Query: 20  APVPA---KKKTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXX 190
           AP PA   K++ +KV NPLFEKRPK FGIG  + PK+DL RFVKWP              
Sbjct: 12  APAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYK 71

Query: 191 XXXXPPALHQFTRTLDKNLATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGK-TVEAKK 367
               PPA++QFT+ LD+  AT L K+  KYRPE K  KK+RLL RA+ +A GK  V  K+
Sbjct: 72  RLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKR 131

Query: 368 PIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGS 547
           P V++ G+N VT L+E  KAQLVVIAHDVDPIELVV+LPALCRKM VPYCI+KGK+RLG 
Sbjct: 132 PPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGR 191

Query: 548 IVH 556
           +VH
Sbjct: 192 LVH 194

to top

>RL7A_ICTPU (Q90YW2) 60S ribosomal protein L7a|
          Length = 265

 Score =  205 bits (522), Expect = 6e-53
 Identities = 109/186 (58%), Positives = 129/186 (69%), Gaps = 2/186 (1%)
 Frame = +2

Query: 5   KRGGKAPVPAKK-KTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXX 181
           K+   AP  AKK + +KV NPLFEKRPK FGIG  + PK+DL RFVKWP           
Sbjct: 9   KKVAPAPSVAKKHEVKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYVRLQRHGSI 68

Query: 182 XXXXXXXPPALHQFTRTLDKNLATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGK-TVE 358
                  PPA++QF + LD+  AT LFK+  KYRPE K  KK RLL RA+ +A GK  V 
Sbjct: 69  LYKRLKVPPAINQFNQALDRQTATQLFKLAHKYRPETKQEKKRRLLARAEQKAAGKGDVP 128

Query: 359 AKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSR 538
            K+P VV+ G+N VT L+E  KAQLVVIAHDVDPIELV++LPALCRKM VPYCIVKGK+R
Sbjct: 129 TKRPPVVRAGVNTVTSLVESKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKAR 188

Query: 539 LGSIVH 556
           LG +VH
Sbjct: 189 LGRLVH 194

to top

>RL7A_FUGRU (O57592) 60S ribosomal protein L7a (Surfeit locus protein 3)|
          Length = 265

 Score =  205 bits (522), Expect = 6e-53
 Identities = 107/186 (57%), Positives = 130/186 (69%), Gaps = 2/186 (1%)
 Frame = +2

Query: 5   KRGGKAPVPAKK-KTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXX 181
           K+   AP  AKK + +KV NPLFEKRPK FGIG  + PK+DL RFVKWP           
Sbjct: 9   KKVAPAPSVAKKHEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRSI 68

Query: 182 XXXXXXXPPALHQFTRTLDKNLATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGK-TVE 358
                  PPA++QFT+ LD+  AT LFK+  KYRPE K  KK+RLL RA+ +A GK    
Sbjct: 69  LYKRLKVPPAINQFTQALDRQTATQLFKLAHKYRPETKQEKKKRLLARAEQKAAGKGDAP 128

Query: 359 AKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSR 538
            K+P V++ G+N +T L+E  KAQLVVIAHDVDPIELV++LPALCRKM VPYCIVKGK+R
Sbjct: 129 TKRPPVLRAGVNTITSLVENKKAQLVVIAHDVDPIELVIFLPALCRKMGVPYCIVKGKAR 188

Query: 539 LGSIVH 556
           LG +VH
Sbjct: 189 LGRLVH 194

to top

>RL7A_DROME (P46223) 60S ribosomal protein L7a|
          Length = 271

 Score =  202 bits (515), Expect = 4e-52
 Identities = 109/185 (58%), Positives = 128/185 (69%), Gaps = 2/185 (1%)
 Frame = +2

Query: 5   KRGGKAPVPAKKKT-EKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXX 181
           K+   AP+  KK   +KV N LFEKRPK FGIG  + PK+DL RFV+WP           
Sbjct: 15  KKVAPAPLAVKKPVVKKVVNQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAV 74

Query: 182 XXXXXXXPPALHQFTRTLDKNLATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGKTVEA 361
                  PP +HQF++TLDK  A  LFK+L KYRPE  +AKK RL K A+A+A+GK VE 
Sbjct: 75  LQKRLKVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEP 134

Query: 362 KK-PIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSR 538
           KK P  V  G N VT LIEQ KAQLVVIAHDVDP+ELV++LPALCRKM VPYCIVKGK+R
Sbjct: 135 KKKPSYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKAR 194

Query: 539 LGSIV 553
           LG +V
Sbjct: 195 LGRLV 199

to top

>RL7A_CHICK (P32429) 60S ribosomal protein L7a|
          Length = 265

 Score =  201 bits (510), Expect = 2e-51
 Identities = 104/183 (56%), Positives = 127/183 (69%), Gaps = 4/183 (2%)
 Frame = +2

Query: 20  APVPA---KKKTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXX 190
           AP PA   K++ +KV NPLFEKRPK FGIG  + PK+DL RFVKWP              
Sbjct: 12  APAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRSILYK 71

Query: 191 XXXXPPALHQFTRTLDKNLATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGK-TVEAKK 367
               PPA++QF++ LD+  AT L K+  KYRPE K  KK+RLL RA+ +A GK     K+
Sbjct: 72  RLKVPPAINQFSQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEQKAAGKGDTPTKR 131

Query: 368 PIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGS 547
           P V++ G+N VT L+E  KAQLVVIAHDVDPIELVV+LPALCRKM VPYCI+K K+RLG 
Sbjct: 132 PPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKSKARLGR 191

Query: 548 IVH 556
           +VH
Sbjct: 192 LVH 194

to top

>RL8_SCHPO (O13672) 60S ribosomal protein L8 (L7A) (L4)|
          Length = 258

 Score =  195 bits (495), Expect = 8e-50
 Identities = 105/189 (55%), Positives = 127/189 (67%), Gaps = 4/189 (2%)
 Frame = +2

Query: 2   PKRGGKAPVP-AKKKTEKVT-NPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXX 175
           PK    AP P A+ K  K T NPLF  RP+ FGIG  + PK+DL RFVKWP         
Sbjct: 2   PKSKKVAPSPFAQPKAAKTTKNPLFVSRPRSFGIGQDIQPKRDLSRFVKWPEYIRLQRRR 61

Query: 176 XXXXXXXXXPPALHQFTRTLDKNLATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGKTV 355
                    PPA+ QF +TLDKN AT +FK+L KYRPE    KK+RL+  A+A A GK+ 
Sbjct: 62  KILNLRLKVPPAIAQFQKTLDKNTATQVFKLLNKYRPETAAEKKQRLVAEAEAVANGKSA 121

Query: 356 E--AKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKG 529
           +  +KKP  VKYGLNHV  LIE  KA+LV+IA DVDPIELVV+LPALC+KM VPY IVK 
Sbjct: 122 QDVSKKPYNVKYGLNHVVALIEAKKAKLVLIASDVDPIELVVFLPALCKKMGVPYAIVKN 181

Query: 530 KSRLGSIVH 556
           K+RLG+++H
Sbjct: 182 KARLGTVIH 190

to top

>RL8A_YEAST (P17076) 60S ribosomal protein L8-A (L7A-2) (L4-2) (YL5) (RP6)|
           (Maintenance of killer protein 7)
          Length = 255

 Score =  186 bits (471), Expect = 5e-47
 Identities = 100/187 (53%), Positives = 121/187 (64%), Gaps = 3/187 (1%)
 Frame = +2

Query: 5   KRGGKAPVPAKK-KTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXX 181
           K+   AP  AK  K+ K  NPL    PK FGIG A+ PK++L R+VKWP           
Sbjct: 4   KKVAPAPFGAKSTKSNKTRNPLTHSTPKNFGIGQAVQPKRNLSRYVKWPEYVRVQRQKKI 63

Query: 182 XXXXXXXPPALHQFTRTLDKNLATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGKTVE- 358
                  PP + QF  TLD+N A   FK+  KYRPE    KKERL K A A AEGK+ + 
Sbjct: 64  LSIRLKVPPTIAQFQYTLDRNTAAETFKLFNKYRPETAAEKKERLTKEAAAVAEGKSKQD 123

Query: 359 -AKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKS 535
            + KP  VKYGLNHV  LIE  KA+LV+IA+DVDPIELVV+LPALC+KM VPY IVKGK+
Sbjct: 124 ASPKPYAVKYGLNHVVALIENKKAKLVLIANDVDPIELVVFLPALCKKMGVPYAIVKGKA 183

Query: 536 RLGSIVH 556
           RLG++V+
Sbjct: 184 RLGTLVN 190

to top

>RL8B_YEAST (P29453) 60S ribosomal protein L8-B (L7A-1) (L4-1) (YL5) (RP6)|
          Length = 255

 Score =  185 bits (469), Expect = 9e-47
 Identities = 99/187 (52%), Positives = 121/187 (64%), Gaps = 3/187 (1%)
 Frame = +2

Query: 5   KRGGKAPVPAKK-KTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXX 181
           K+   AP  AK  K+ K  NPL    PK FGIG A+ PK++L R+VKWP           
Sbjct: 4   KKVAPAPFGAKSTKSNKAKNPLTHSTPKNFGIGQAVQPKRNLSRYVKWPEYVRLQRQKKI 63

Query: 182 XXXXXXXPPALHQFTRTLDKNLATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGKTVE- 358
                  PP + QF  TLD+N A   FK+  KYRPE    KKERL K A A AEGK+ + 
Sbjct: 64  LSIRLKVPPTIAQFQYTLDRNTAAETFKLFNKYRPETAAEKKERLTKEAAAIAEGKSKQD 123

Query: 359 -AKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKS 535
            + KP  VKYGLNHV  LIE  KA+LV+IA+DVDPIELVV+LPALC+KM VPY I+KGK+
Sbjct: 124 ASPKPYAVKYGLNHVVSLIENKKAKLVLIANDVDPIELVVFLPALCKKMGVPYAIIKGKA 183

Query: 536 RLGSIVH 556
           RLG++V+
Sbjct: 184 RLGTLVN 190

to top

>RL7A_ANOGA (O76732) 60S ribosomal protein L7a|
          Length = 271

 Score =  184 bits (466), Expect = 2e-46
 Identities = 92/177 (51%), Positives = 122/177 (68%), Gaps = 1/177 (0%)
 Frame = +2

Query: 29  PAKKKTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXXXXXXPP 208
           P K + +KV NPLFEKR K +GIG  + PK+DL RFVKWP                  PP
Sbjct: 25  PKKVEVKKVVNPLFEKRVKNYGIGQNVQPKRDLSRFVKWPKYIRIQRHRAILQKRLKIPP 84

Query: 209 ALHQFTRTLDKNLATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGKTVE-AKKPIVVKY 385
            ++QFT+TLDK  A  + K   KYRPE+ +A+ +RL  +A+A+A GK    +K+   ++ 
Sbjct: 85  PINQFTQTLDKPTAQQVMKCWKKYRPENPIARVQRLKAKAEAKAAGKEEPPSKRANQLRQ 144

Query: 386 GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVH 556
           G+N V  ++EQ KAQLV+IAHDVDPIELVV+LPALCRKM VPYCI+KGK+RLG++V+
Sbjct: 145 GINSVVKMVEQKKAQLVIIAHDVDPIELVVYLPALCRKMGVPYCIIKGKARLGTLVY 201

to top

>RL7A_CAEEL (Q966C6) 60S ribosomal protein L7a|
          Length = 264

 Score =  167 bits (424), Expect = 1e-41
 Identities = 88/180 (48%), Positives = 115/180 (63%), Gaps = 2/180 (1%)
 Frame = +2

Query: 20  APVPAKKKTEK-VTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXXXX 196
           A + A+ + +K V NPLFEKR + F IG  + PKKD+ RFVKWP                
Sbjct: 15  AHIRAQTQVQKEVKNPLFEKRARNFNIGQDIQPKKDVTRFVKWPKYIRLQRQSAILQKRL 74

Query: 197 XXPPALHQFTRTLDKNLATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGKTVEA-KKPI 373
             PP ++QF   LD   A   FK+L KYRPE   AKK RL  RA+A A GK  E  K+P 
Sbjct: 75  KVPPTINQFRTALDSQSARQAFKLLDKYRPESTEAKKNRLRARAEARAAGKKEEVTKRPN 134

Query: 374 VVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIV 553
            V++G+N +T L+E  +AQLV+IAHDV+P+E+V+ LPALCRK  VPY I+KGK+ LG++V
Sbjct: 135 TVRHGVNTITRLVETRRAQLVLIAHDVNPLEIVLHLPALCRKYNVPYAIIKGKASLGTVV 194

to top

>RL7A_PIG (Q29375) 60S ribosomal protein L7a (Fragment)|
          Length = 132

 Score =  131 bits (330), Expect = 1e-30
 Identities = 68/104 (65%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
 Frame = +2

Query: 248 ATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGK-TVEAKKPIVVKYGLNHVTYLIEQSK 424
           AT L K+  KYRPE K  KK+RLL RA+ +A  K  V  K+P V++ G+N VT L+E  K
Sbjct: 3   ATQLLKVAHKYRPETKQEKKQRLLARAEKKAAXKGDVPTKRPPVLRAGVNTVTTLVENKK 62

Query: 425 AQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIVH 556
           AQLVVIAHDVDPIELVV+LPALCRKM VPYCI+KGK+RLG +VH
Sbjct: 63  AQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVH 106

to top

>RL7A_AERPE (Q9YAX7) 50S ribosomal protein L7Ae|
          Length = 127

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 35/87 (40%), Positives = 46/87 (52%)
 Frame = +2

Query: 284 PEDKVAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPI 463
           PED   K    +KRA+               +K G N  T  +E+  A+LVVIA DVDP 
Sbjct: 12  PEDLAEKAYEAVKRARETGR-----------IKKGTNETTKAVERGLAKLVVIAEDVDPP 60

Query: 464 ELVVWLPALCRKMEVPYCIVKGKSRLG 544
           E+V+ LP LC + ++PY  V  K RLG
Sbjct: 61  EIVMHLPLLCDEKKIPYVYVPSKKRLG 87

to top

>RL7A_THEAC (Q9HJ56) 50S ribosomal protein L7Ae|
          Length = 121

 Score = 59.3 bits (142), Expect = 7e-09
 Identities = 31/59 (52%), Positives = 41/59 (69%)
 Frame = +2

Query: 377 VKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIV 553
           VK G N V   IE+ +++LVVIA DV+P E+V +LP+LC   +VPY  VK K+ LGS V
Sbjct: 31  VKKGTNEVIKSIERGESKLVVIAEDVNPPEVVYYLPSLCEDKKVPYVYVKKKADLGSKV 89

to top

>RL7A_PYRKO (Q5JGR3) 50S ribosomal protein L7Ae|
          Length = 123

 Score = 58.9 bits (141), Expect = 9e-09
 Identities = 26/57 (45%), Positives = 37/57 (64%)
 Frame = +2

Query: 377 VKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGS 547
           ++ G N  T  +E+ +A+LV+IA DVDP E+V  LP LC + E+PY  V  K  LG+
Sbjct: 32  IRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYVYVPSKKELGA 88

to top

>RL7A_PYRHO (P62009) 50S ribosomal protein L7Ae|
          Length = 123

 Score = 58.9 bits (141), Expect = 9e-09
 Identities = 26/57 (45%), Positives = 37/57 (64%)
 Frame = +2

Query: 377 VKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGS 547
           ++ G N  T  +E+ +A+LV+IA DVDP E+V  LP LC + E+PY  V  K  LG+
Sbjct: 32  IRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYIYVPSKKELGA 88

to top

>RL7A_PYRFU (Q8U160) 50S ribosomal protein L7Ae|
          Length = 123

 Score = 58.9 bits (141), Expect = 9e-09
 Identities = 26/57 (45%), Positives = 37/57 (64%)
 Frame = +2

Query: 377 VKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGS 547
           ++ G N  T  +E+ +A+LV+IA DVDP E+V  LP LC + E+PY  V  K  LG+
Sbjct: 32  IRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYIYVPSKKELGA 88

to top

>RL7A_PYRAB (P62008) 50S ribosomal protein L7Ae|
          Length = 123

 Score = 58.9 bits (141), Expect = 9e-09
 Identities = 26/57 (45%), Positives = 37/57 (64%)
 Frame = +2

Query: 377 VKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGS 547
           ++ G N  T  +E+ +A+LV+IA DVDP E+V  LP LC + E+PY  V  K  LG+
Sbjct: 32  IRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYIYVPSKKELGA 88

to top

>RL7A_ARCFU (O29494) 50S ribosomal protein L7Ae|
          Length = 119

 Score = 58.9 bits (141), Expect = 9e-09
 Identities = 33/75 (44%), Positives = 42/75 (56%)
 Frame = +2

Query: 329 QAEAEGKTVEAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEV 508
           Q EA     + ++   VK G N  T  +E+  A+LV IA DVDP E+V  LP LC +  V
Sbjct: 12  QNEALSLLEKVRESGKVKKGTNETTKAVERGLAKLVYIAEDVDPPEIVAHLPLLCEEKNV 71

Query: 509 PYCIVKGKSRLGSIV 553
           PY  VK K+ LG  V
Sbjct: 72  PYIYVKSKNDLGRAV 86

to top

>RL7A_THEVO (Q97BK8) 50S ribosomal protein L7Ae|
          Length = 121

 Score = 58.9 bits (141), Expect = 9e-09
 Identities = 30/59 (50%), Positives = 41/59 (69%)
 Frame = +2

Query: 377 VKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGSIV 553
           +K G N V   IE+ +++LVVIA DV+P E+V +LP+LC   +VPY  VK K+ LGS V
Sbjct: 31  IKKGTNEVIKSIERGESKLVVIAEDVNPPEVVYYLPSLCEDKKVPYVYVKKKADLGSKV 89

to top

>RL7A_PICTO (Q6KZI7) 50S ribosomal protein L7Ae|
          Length = 127

 Score = 58.5 bits (140), Expect = 1e-08
 Identities = 29/56 (51%), Positives = 38/56 (67%)
 Frame = +2

Query: 377 VKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLG 544
           V+ G N V   IE+ +++LVVIA DV P E+V +LP LC + +VPY  VK KS LG
Sbjct: 30  VRKGTNEVVKSIERGESKLVVIAEDVSPAEVVYYLPTLCEERKVPYVYVKKKSDLG 85

to top

>RL7A_SULAC (Q4J8P1) 50S ribosomal protein L7Ae|
          Length = 126

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 29/63 (46%), Positives = 39/63 (61%)
 Frame = +2

Query: 356 EAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKS 535
           +AK    +K G N  T  +E+S+A+LVVIA DV P E+V  LP LC + ++PY  V  K 
Sbjct: 25  KAKDSGKIKKGTNETTKAVERSQAKLVVIAEDVQPEEIVAHLPLLCEEKKIPYVYVPSKK 84

Query: 536 RLG 544
            LG
Sbjct: 85  SLG 87

to top

>RL7A_PYRAE (Q8ZTA5) 50S ribosomal protein L7Ae|
          Length = 151

 Score = 57.0 bits (136), Expect = 4e-08
 Identities = 27/56 (48%), Positives = 36/56 (64%)
 Frame = +2

Query: 377 VKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLG 544
           +K G N  T  +E+  A+LV+IA DVDP E+V  LP LC + +VPY  V  K +LG
Sbjct: 47  IKKGTNETTKAVERGLAKLVLIAEDVDPPEVVAHLPLLCEEKKVPYVYVPSKEKLG 102

to top

>RL7A_SULTO (Q971C9) 50S ribosomal protein L7Ae|
          Length = 126

 Score = 56.6 bits (135), Expect = 5e-08
 Identities = 28/63 (44%), Positives = 39/63 (61%)
 Frame = +2

Query: 356 EAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKS 535
           +AK+   +K G N  T  +E+ +A+LVVIA DV P E+V  LP LC + ++PY  V  K 
Sbjct: 25  KAKESGKIKKGTNETTKAVERGQAKLVVIATDVQPEEIVAHLPLLCEEKKIPYVYVPSKK 84

Query: 536 RLG 544
            LG
Sbjct: 85  ALG 87

to top

>RL7A_SULSO (P55858) 50S ribosomal protein L7Ae|
          Length = 127

 Score = 56.6 bits (135), Expect = 5e-08
 Identities = 27/63 (42%), Positives = 39/63 (61%)
 Frame = +2

Query: 356 EAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKS 535
           +AK+   +K G N  T  +E+ +A+LV+IA DV P E+V  LP LC + ++PY  V  K 
Sbjct: 25  KAKESGKIKKGTNETTKAVERGQAKLVIIAEDVQPEEIVAHLPLLCDEKKIPYVYVSSKK 84

Query: 536 RLG 544
            LG
Sbjct: 85  ALG 87

to top

>RL7A_NANEQ (P62427) 50S ribosomal protein L7Ae|
          Length = 125

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 30/87 (34%), Positives = 48/87 (55%)
 Frame = +2

Query: 284 PEDKVAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPI 463
           PE+   K   L+++A+   +           ++ G N  T  +E+ +A+LV+IA +V+P 
Sbjct: 13  PEELANKVYELVRKARETGK-----------IRKGTNETTKAVERGQAKLVIIAENVNPP 61

Query: 464 ELVVWLPALCRKMEVPYCIVKGKSRLG 544
           E+V+ LPALC +  VPY  V  K  LG
Sbjct: 62  EIVMHLPALCEEKGVPYVYVPSKEELG 88

to top

>RL7A_METTH (O26355) 50S ribosomal protein L7Ae|
          Length = 123

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 26/57 (45%), Positives = 35/57 (61%)
 Frame = +2

Query: 377 VKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGS 547
           V  G N VT  +E+  AQLV+IA DV+P E+V  LP L  + E+PY  +  K  LG+
Sbjct: 32  VSKGTNEVTKAVERGVAQLVLIAEDVEPAEIVAHLPLLAEEKEIPYIYIPTKDELGA 88

to top

>RL7A_METJA (P54066) 50S ribosomal protein L7Ae|
          Length = 117

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 31/80 (38%), Positives = 44/80 (55%)
 Frame = +2

Query: 305 KERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLP 484
           K ++ +  Q E      +A+K   +K G N VT  +E+  A+LV+IA DV P E+V  LP
Sbjct: 6   KFKVPEEIQKELLDAVAKAQK---IKKGANEVTKAVERGIAKLVIIAEDVKPEEVVAHLP 62

Query: 485 ALCRKMEVPYCIVKGKSRLG 544
            LC +  +PY  V  K  LG
Sbjct: 63  YLCEEKGIPYAYVASKQDLG 82

to top

>RL7A_METKA (Q8TV03) 50S ribosomal protein L7Ae|
          Length = 123

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 25/57 (43%), Positives = 35/57 (61%)
 Frame = +2

Query: 377 VKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGS 547
           ++ G N  T  +E+ +A LV+IA DVDP E+V  LP LC +  +PY  V  K  LG+
Sbjct: 32  IRKGTNETTKAVEREEAVLVLIAEDVDPEEVVAHLPELCDEKGIPYVYVPSKDELGA 88

to top

>NHPX_DROME (Q9U3Z7) NHP2-like protein (Hoi-polloi protein)|
          Length = 127

 Score = 49.7 bits (117), Expect = 6e-06
 Identities = 22/56 (39%), Positives = 33/56 (58%)
 Frame = +2

Query: 377 VKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLG 544
           ++ G N  T  + +  A +VV+A D +PIE+++ LP LC    VPY  V+ K  LG
Sbjct: 34  LRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALG 89

to top

>NHPX_CAEEL (Q21568) NHP2/L7aE family protein YEL026W homolog|
          Length = 128

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 20/56 (35%), Positives = 35/56 (62%)
 Frame = +2

Query: 377 VKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLG 544
           +K G N  T  + +  ++++V+A D +P+E+++ LP LC    VPY  V+ K+ LG
Sbjct: 35  LKKGANEATKTLNRGISEIIVMAADAEPLEILLHLPLLCEDKNVPYVFVRSKAALG 90

to top

>RL7A_METAC (Q8TQL9) 50S ribosomal protein L7Ae|
          Length = 120

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 21/57 (36%), Positives = 34/57 (59%)
 Frame = +2

Query: 377 VKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGS 547
           +K G N  T  IE+  A+LV+IA D++P E+V  +  L  + + PY  +K +  LG+
Sbjct: 30  IKKGTNEATKAIERGNAKLVLIAEDIEPAEIVAHIGPLSEEKKAPYIFIKNQKELGA 86

to top

>NOLA2_BRABE (Q8I7X7) H/ACA ribonucleoprotein complex subunit 2-like protein|
          Length = 159

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
 Frame = +2

Query: 347 KTVE-AKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIV 523
           KTV+ A K   ++ G+  V   I++ +  +V+IA D  PIE+   LP +C   ++PYC V
Sbjct: 55  KTVKKASKEKNIRKGIRDVQKFIKKGERGIVLIAGDTTPIEVYCHLPVVCEDAKIPYCYV 114

Query: 524 KGKSRLG 544
             K  LG
Sbjct: 115 PAKQDLG 121

to top

>NHPX_RAT (P55770) NHP2-like protein 1 (High mobility group-like nuclear|
           protein 2 homolog 1) (U4/U6.U5 tri-snRNP 15.5 kDa
           protein) (OTK27)
          Length = 127

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 19/56 (33%), Positives = 33/56 (58%)
 Frame = +2

Query: 377 VKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLG 544
           ++ G N  T  + +  ++ +V+A D +P+E+++ LP LC    VPY  V+ K  LG
Sbjct: 34  LRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALG 89

to top

>NHPX_MOUSE (Q9D0T1) NHP2-like protein 1 (High mobility group-like nuclear|
           protein 2 homolog 1) (U4/U6.U5 tri-snRNP 15.5 kDa
           protein) (Sperm-specific antigen 1) (Fertilization
           antigen 1) (FA-1)
          Length = 127

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 19/56 (33%), Positives = 33/56 (58%)
 Frame = +2

Query: 377 VKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLG 544
           ++ G N  T  + +  ++ +V+A D +P+E+++ LP LC    VPY  V+ K  LG
Sbjct: 34  LRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALG 89

to top

>NHPX_HUMAN (P55769) NHP2-like protein 1 (High mobility group-like nuclear|
           protein 2 homolog 1) (U4/U6.U5 tri-snRNP 15.5 kDa
           protein) (OTK27) (hSNU13)
          Length = 127

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 19/56 (33%), Positives = 33/56 (58%)
 Frame = +2

Query: 377 VKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLG 544
           ++ G N  T  + +  ++ +V+A D +P+E+++ LP LC    VPY  V+ K  LG
Sbjct: 34  LRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALG 89

to top

>RL7A_METMA (Q8PU74) 50S ribosomal protein L7Ae|
          Length = 120

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 21/57 (36%), Positives = 34/57 (59%)
 Frame = +2

Query: 377 VKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGS 547
           +K G N  T  IE+  A+LV+IA D++P E+V  +  L  + + PY  +K +  LG+
Sbjct: 30  IKKGTNEATKAIERGNAKLVLIAEDIEPAEIVAHIGPLSEEKKAPYIYIKNQKDLGA 86

to top

>NHP2_YEAST (P32495) H/ACA ribonucleoprotein complex subunit 2 (H/ACA snoRNP|
           protein NHP2) (High mobility group-like nuclear protein
           2)
          Length = 156

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
 Frame = +2

Query: 347 KTVE-AKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIV 523
           KTV+ A K   VK G+  V   + + +  LVVIA D+ P +++  +P LC    VPY  +
Sbjct: 45  KTVKKASKAKNVKRGVKEVVKALRKGEKGLVVIAGDISPADVISHIPVLCEDHSVPYIFI 104

Query: 524 KGKSRLGS 547
             K  LG+
Sbjct: 105 PSKQDLGA 112

to top

>SNU13_YEAST (P39990) 13 kDa ribonucleoprotein-associated protein|
          Length = 126

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 19/56 (33%), Positives = 32/56 (57%)
 Frame = +2

Query: 377 VKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLG 544
           +K G N  T  + +  ++ +++A D +PIE+++ LP LC    VPY  V  +  LG
Sbjct: 33  LKKGANEATKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPSRVALG 88

to top

>NOLA2_MOUSE (Q9CRB2) H/ACA ribonucleoprotein complex subunit 2 (Nucleolar|
           protein family A member 2) (snoRNP protein NHP2)
          Length = 153

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 23/79 (29%), Positives = 40/79 (50%)
 Frame = +2

Query: 311 RLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPAL 490
           R L R   +   K V+ K+   ++ G+  V   + + +  ++V+A D  PIE+   LP L
Sbjct: 41  RRLTRKLYKCIKKAVKQKQ---IRRGVKEVQKFVNKGEKGIMVLAGDTLPIEVYCHLPVL 97

Query: 491 CRKMEVPYCIVKGKSRLGS 547
           C    +PY  +  K+ LG+
Sbjct: 98  CEDQNLPYVYIPSKTDLGA 116

to top

>NOLA2_CAEBR (Q60YI3) Putative H/ACA ribonucleoprotein complex subunit 2-like|
           protein
          Length = 163

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 23/88 (26%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
 Frame = +2

Query: 293 KVAKKE-RLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIEL 469
           K+AKK  +L+K+A A  +           ++ G+  V   + +++  + ++A +V PI++
Sbjct: 50  KLAKKVYKLIKKAAAGEK----------TLREGIKDVQKELRKNEKGICILAGNVSPIDV 99

Query: 470 VVWLPALCRKMEVPYCIVKGKSRLGSIV 553
              +PA+C + E+PY  +  + +LG  V
Sbjct: 100 YSHIPAICEEKEIPYVYIPSREQLGLAV 127

to top

>NOLA2_XENTR (Q6P8C4) H/ACA ribonucleoprotein complex subunit 2-like protein|
          Length = 149

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 19/57 (33%), Positives = 31/57 (54%)
 Frame = +2

Query: 377 VKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGS 547
           ++ G+  V   I + +  +VV+A D  PIE+   +P +C    +PY  V  KS LG+
Sbjct: 56  IRRGVKEVQKFINKGEKGIVVMAGDTLPIEVYCHIPVMCEDRGIPYSYVPSKSDLGA 112

to top

>NOLA2_XENLA (Q6NTV9) H/ACA ribonucleoprotein complex subunit 2-like protein|
          Length = 149

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 19/57 (33%), Positives = 31/57 (54%)
 Frame = +2

Query: 377 VKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGS 547
           ++ G+  V   I + +  +VV+A D  PIE+   +P +C    +PY  V  KS LG+
Sbjct: 56  IRRGVKEVQKFINKGEKGIVVMAGDTLPIEVYCHIPVMCEDRGIPYSYVPSKSDLGA 112

to top

>NHP2_SCHPO (Q9P7H0) H/ACA ribonucleoprotein complex subunit 2 (H/ACA snoRNP|
           protein NHP2) (High mobility group-like nuclear protein
           2) (P17-nhp2)
          Length = 154

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = +2

Query: 347 KTVE-AKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIV 523
           KTV+ A K   +  G+  V   + + +  LV++A D+ P++++  +P LC    VPY   
Sbjct: 43  KTVKKASKQKHILRGVKEVVKAVRKGEKGLVILAGDISPMDVISHIPVLCEDNNVPYLYT 102

Query: 524 KGKSRLG 544
             K  LG
Sbjct: 103 VSKELLG 109

to top

>NOLA2_BOVIN (Q5E950) H/ACA ribonucleoprotein complex subunit 2 (Nucleolar|
           protein family A member 2)
          Length = 153

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 23/79 (29%), Positives = 40/79 (50%)
 Frame = +2

Query: 311 RLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPAL 490
           R L R   +   K V+ K+   ++ G+  V   I + +  ++V+A D  PIE+   LP +
Sbjct: 41  RRLTRKLYKCIKKAVKQKQ---IRRGVKEVQKFINKGEKGIMVLAGDTLPIEVYCHLPVM 97

Query: 491 CRKMEVPYCIVKGKSRLGS 547
           C    +PY  +  K+ LG+
Sbjct: 98  CEDRNLPYVYIPSKTDLGA 116

to top

>NOLA2_ARATH (Q9LEY9) H/ACA ribonucleoprotein complex subunit 2-like protein|
           (Nhp2-like protein)
          Length = 156

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 20/55 (36%), Positives = 30/55 (54%)
 Frame = +2

Query: 377 VKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRL 541
           +K G+  V   I + +  L VIA ++ PI+++  LP LC +  VPY  V  K  L
Sbjct: 51  LKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHLPILCEEAGVPYVYVPSKEDL 105

to top

>NOLA2_PONPY (Q5RC65) H/ACA ribonucleoprotein complex subunit 2 (Nucleolar|
           protein family A member 2)
          Length = 153

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 22/79 (27%), Positives = 40/79 (50%)
 Frame = +2

Query: 311 RLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPAL 490
           R L R   +   K V+ K+   ++ G+  V   + + +  ++V+A D  PIE+   LP +
Sbjct: 41  RRLTRKLYKCIKKAVKQKQ---IRRGVKEVQKFVNKGEKGIMVLAGDTLPIEVYCHLPVM 97

Query: 491 CRKMEVPYCIVKGKSRLGS 547
           C    +PY  +  K+ LG+
Sbjct: 98  CEDRNLPYVYIPSKTDLGA 116

to top

>NOLA2_HUMAN (Q9NX24) H/ACA ribonucleoprotein complex subunit 2 (Nucleolar|
           protein family A member 2) (snoRNP protein NHP2)
          Length = 153

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 22/79 (27%), Positives = 40/79 (50%)
 Frame = +2

Query: 311 RLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPAL 490
           R L R   +   K V+ K+   ++ G+  V   + + +  ++V+A D  PIE+   LP +
Sbjct: 41  RRLTRKLYKCIKKAVKQKQ---IRRGVKEVQKFVNKGEKGIMVLAGDTLPIEVYCHLPVM 97

Query: 491 CRKMEVPYCIVKGKSRLGS 547
           C    +PY  +  K+ LG+
Sbjct: 98  CEDRNLPYVYIPSKTDLGA 116

to top

>NOLA2_DROYA (Q6XIP0) H/ACA ribonucleoprotein complex subunit 2-like protein|
          Length = 160

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
 Frame = +2

Query: 293 KVAKK-ERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIEL 469
           K+AKK  +L+K+A           K    ++ GL  V   + + +  + + A DV P+++
Sbjct: 48  KLAKKCYKLVKKAM----------KHKTFLRNGLKDVQTRLRKGETGICIFAGDVTPVDI 97

Query: 470 VVWLPALCRKMEVPYCIVKGKSRLGS 547
           +  LPA+C +  +PY     ++ LG+
Sbjct: 98  MCHLPAVCEEKGIPYAYTPSRADLGA 123

to top

>NOLA2_BRARE (Q6PBV6) H/ACA ribonucleoprotein complex subunit 2-like protein|
           (Nucleolar protein family A member 2-like protein)
          Length = 150

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 21/64 (32%), Positives = 32/64 (50%)
 Frame = +2

Query: 356 EAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKS 535
           +A K   ++ G+  V   I + +  +VV A D  PI++   LP +C    +PY  V  K 
Sbjct: 50  KAAKVKQIRRGVKEVQKFINKGETGIVVFAGDTLPIDVYCHLPIMCEDRSLPYAYVPSKV 109

Query: 536 RLGS 547
            LGS
Sbjct: 110 DLGS 113

to top

>NOLA2_DROME (Q9V3U2) H/ACA ribonucleoprotein complex subunit 2-like protein|
           (Nucleolar protein family A member 2-like protein)
           (H/ACA snoRNP protein NHP2)
          Length = 160

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
 Frame = +2

Query: 293 KVAKK-ERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIEL 469
           K+AKK  +L+K+A           K    ++ GL  V   + + +  + + A DV P+++
Sbjct: 48  KLAKKCYKLVKKAM----------KHKTFLRNGLKDVQTRLRKGETGICIFAGDVTPVDI 97

Query: 470 VVWLPALCRKMEVPYCIVKGKSRLGS 547
           +  LPA+C +  +PY     ++ LG+
Sbjct: 98  MCHLPAVCEEKGIPYTYTPSRADLGA 123

to top

>NOLA2_CAEEL (Q9XXD4) Putative H/ACA ribonucleoprotein complex subunit 2-like|
           protein
          Length = 163

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 22/88 (25%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
 Frame = +2

Query: 293 KVAKKE-RLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIEL 469
           K+AKK  +L+K+A A  +           ++ G+  V   + +++  + ++A +V PI++
Sbjct: 50  KLAKKVYKLIKKASAGDK----------TLREGIKDVQKELRRNEKGICILAGNVSPIDV 99

Query: 470 VVWLPALCRKMEVPYCIVKGKSRLGSIV 553
              +P +C + E+PY  +  + +LG  V
Sbjct: 100 YSHIPGICEEKEIPYVYIPSREQLGLAV 127

to top

>RS12A_ARATH (Q9S9P1) 40S ribosomal protein S12-1|
          Length = 144

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 21/53 (39%), Positives = 27/53 (50%)
 Frame = +2

Query: 386 GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLG 544
           GL+    LIE+  AQLVV+A D +  + V  + ALC   EV    V     LG
Sbjct: 47  GLHECAKLIEKRVAQLVVLAEDCNQPDYVKLVKALCADHEVRLLTVPSAKTLG 99

to top

>LAH1_YEAST (P33399) La protein homolog (La ribonucleoprotein) (La autoantigen|
           homolog)
          Length = 275

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 20/69 (28%), Positives = 35/69 (50%)
 Frame = +2

Query: 260 FKMLLKYRPEDKVAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQSKAQLVV 439
           F  + KYRP DKV +  R  +  +  A+G+ V+ + P+ +    N     IEQ++  L V
Sbjct: 71  FNRMKKYRPVDKVIEALRSSEILEVSADGENVKRRVPLDLTAARN---ARIEQNQRTLAV 127

Query: 440 IAHDVDPIE 466
           +    + +E
Sbjct: 128 MNFPHEDVE 136

to top

>RS12_HORVU (Q9XHS0) 40S ribosomal protein S12|
          Length = 143

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 19/53 (35%), Positives = 24/53 (45%)
 Frame = +2

Query: 386 GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLG 544
           GL      IE+  AQL V+A D D  + V  + ALC +  V    V     LG
Sbjct: 46  GLREAAKSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLG 98

to top

>RS12C_ARATH (Q9SKZ3) 40S ribosomal protein S12-3|
          Length = 144

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = +2

Query: 386 GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLG 544
           GL+    LIE+  AQL V+A D +  + V  + ALC    +    V     LG
Sbjct: 47  GLHESAKLIEKRNAQLCVLAEDCNQPDYVKLVKALCADHSIKLLTVPSAKTLG 99

to top

>GUNA_BUTFI (P22541) Endoglucanase A precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase) (Cellulase) (EGA)
          Length = 429

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 13/27 (48%), Positives = 22/27 (81%)
 Frame = +2

Query: 263 KMLLKYRPEDKVAKKERLLKRAQAEAE 343
           K+++K + +D+ AKKE+ LK+A+ EAE
Sbjct: 60  KLVIKEKKQDESAKKEQELKKAKEEAE 86

to top

>CHS5_USTMA (O13394) Chitin synthase 5 (EC 2.4.1.16) (Chitin-UDP|
           acetyl-glucosaminyl transferase 5) (Class-IV chitin
           synthase 5)
          Length = 1239

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -2

Query: 128 GGPSWAGGRRRCQIASASSRTADWSPFPFSSSPGQAP 18
           G PS AGGR    +A A SR + +S  P   + G  P
Sbjct: 617 GSPSVAGGRSSASLAPAHSRRSSFSGSPAEGAMGVCP 653

to top

>H1_CHITH (P21895) Histone H1|
          Length = 231

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 35/126 (27%), Positives = 45/126 (35%), Gaps = 4/126 (3%)
 Frame = +2

Query: 17  KAPVPAKKK--TEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXX 190
           K P  AKK+   +KVT  + EK+PK+         KK      K P              
Sbjct: 109 KLPAAAKKEKVVKKVTKKVTEKKPKKAVSKPKTGEKKVKKTIAKKPKVASATKIKKPVAK 168

Query: 191 XXXXPPALHQFTRTLDKNLATNLFKMLLKYRPEDKVAKKERLL--KRAQAEAEGKTVEAK 364
               P A     +   K  A        K  P+ KVAK ++    K  +  AE K   AK
Sbjct: 169 TTKKPAAAKPTKKVAAKPKAA----PKPKAAPKPKVAKPKKAAAPKAKKPAAEKKPKAAK 224

Query: 365 KPIVVK 382
           KP   K
Sbjct: 225 KPSAKK 230

to top

>MAGC2_HUMAN (Q9UBF1) Melanoma-associated antigen C2 (MAGE-C2 antigen) (MAGE-E1|
           antigen) (Hepatocellular carcinoma-associated antigen
           587) (Cancer-testis antigen 10) (CT10)
          Length = 373

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +2

Query: 203 PPALHQFTRTLDKNLATNLFKMLLKYRPEDKVAKKERLL 319
           P +   FT TLD+ +A  +  +LLKY  E+ V + E L+
Sbjct: 131 PDSESSFTYTLDEKVAELVEFLLLKYEAEEPVTEAEMLM 169


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,680,623
Number of Sequences: 219361
Number of extensions: 1459033
Number of successful extensions: 5308
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 5042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5276
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4528412720
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result