ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags33b05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009646.1| Triticum aestivum clone wrsu1.pk0006.a3:fis, full... 882 0.0
2ref|XM_464784.1| Oryza sativa (japonica cultivar-group), mRNA 323 4e-85
3gb|AY568677.1| Oryza sativa (japonica cultivar-group) proline- a... 303 3e-79
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 272 1e-69
5dbj|AP005756.3| Oryza sativa (japonica cultivar-group) genomic D... 272 1e-69
6dbj|AK058752.1| Oryza sativa (japonica cultivar-group) cDNA clon... 228 2e-56
7ref|NM_191846.1| Oryza sativa (japonica cultivar-group), predic... 52 0.002
8dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
9dbj|AP003343.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
10dbj|AK100192.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
11gb|AC010242.7| Homo sapiens chromosome 5 clone CTC-359E10, compl... 46 0.13
12gb|AC008816.8| Homo sapiens chromosome 5 clone CTD-2122K17, comp... 46 0.13
13gb|AC010280.7| Homo sapiens chromosome 5 clone CTC-537E7, comple... 46 0.13
14gb|AC017093.3|AC017093 Homo sapiens BAC clone RP11-511G7 from 5,... 46 0.13
15gb|AC010157.12| Homo sapiens chromosome 10 clone RP11-202D18, co... 44 0.50
16gb|AC118627.6| Mus musculus chromosome 15, clone RP24-91E8, comp... 42 2.0
17gb|AY582740.1| Chlamydomonas reinhardtii Fe-hydrogenase assembly... 42 2.0
18ref|XM_451567.1| Kluyveromyces lactis NRRL Y-1140, KLLA0B00825g ... 42 2.0
19gb|AC129886.3| Atelerix albiventris clone LB4-234A16, complete s... 42 2.0
20emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 42 2.0
21gb|AC159301.2| Mus musculus BAC clone RP23-213B1 from chromosome... 42 2.0
22gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold 42 2.0
23gb|AC102545.9| Mus musculus chromosome 9, clone RP23-118J13, com... 40 7.8
24gb|AC007245.3| Homo sapiens BAC clone RP11-273L18 from 7, comple... 40 7.8
25emb|CT025841.2| Medicago truncatula chromosome 5 clone mth2-131j... 40 7.8
26gb|AC010099.10| Homo sapiens BAC clone RP11-420H19 from 7, compl... 40 7.8
27emb|AL161517.2|ATCHRIV29 Arabidopsis thaliana DNA chromosome 4, ... 40 7.8
28emb|AL049524.1|ATF7L13 Arabidopsis thaliana DNA chromosome 4, BA... 40 7.8
29gb|AY113188.1| Mastigamoeba balamuthi aldehyde-alcohol dehydroge... 40 7.8
30gb|AC148763.14| Medicago truncatula clone mth2-29o24, complete s... 40 7.8
31emb|BX470154.5| Zebrafish DNA sequence from clone CH211-81N22, c... 40 7.8
32gb|AC093597.3| Homo sapiens BAC clone RP11-187O17 from 4, comple... 40 7.8
33gb|CP000249.1| Frankia sp. CcI3, complete genome 40 7.8
34gb|AF118222.1|F3H7 Arabidopsis thaliana BAC F3H7 40 7.8
35gb|AF142686.1| Cyclolobium nutans maturase-like protein (matK) g... 40 7.8
36gb|AC006120.1|AC006120 Homo sapiens chromosome 17, clone hRPK.34... 40 7.8
37gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome 40 7.8
38gb|AC155302.2| Mus musculus BAC clone RP24-227A11 from chromosom... 40 7.8
39gb|AC140392.3| Mus musculus BAC clone RP24-89F9 from chromosome ... 40 7.8 
>gb|BT009646.1| Triticum aestivum clone wrsu1.pk0006.a3:fis, full insert mRNA
           sequence
          Length = 936

 Score =  882 bits (445), Expect = 0.0
 Identities = 490/505 (97%)
 Strand = Plus / Minus

                                                                       
Query: 70  ccgacgccatcttacggcactacaccgacgccatcttatggcactacaccgacgccatct 129
           ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 660 ccgacgccaacttacggcactacaccgacgccatcttacggcactacaccgacgccatct 601

                                                                       
Query: 130 tacggcactacaccgagcaccccaagtacaccttcccatgaagtccctgcaagtccaaag 189
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 600 tacggcactacaccgagcaccccaagtacaccttcccatgatgtccctgcaagtccaaag 541

                                                                       
Query: 190 aagcatggattcattggatcctgcgacttctggaagaatcacccagacgctataattgca 249
           |||||||| ||||||||||||||||||| |||||||||||||||||| |||||| |||||
Sbjct: 540 aagcatgggttcattggatcctgcgactactggaagaatcacccagatgctatagttgca 481

                                                                       
Query: 250 gctattgggtcccttggcaacatcggcaagacatttggtgctgcatgcagtatgataggt 309
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gctattgggtcccttggcaacatcggcaagacatttggtgctgcatgcagtatgataggt 421

                                                                       
Query: 310 ggcaagaagctaggaaatatgcatgatgcactctcaaacactagaactgatggtattggc 369
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ggcaagaagctaggaaatatgcatgatgcactctcaaacactagaactgatggtattggc 361

                                                                       
Query: 370 gccctgatacgcgagggggcagctgcatacctcaactccattgtgaacaacaagttccca 429
           ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 360 gccctgatacgtgagggggcagctgcatacctcaactccattgtgaacaagaagttccca 301

                                                                       
Query: 430 tttacaacccagcaggtgaaggactgcatcgtcgtggccgcgacctctgatagtgctgct 489
           ||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 300 tttaccacccagcaggtgaaggactgcatcgtcgtggccgtgacctctgatggtgctgct 241

                                                                       
Query: 490 tctgcccaagctggggtcttcaagaaggcaaatgaatcccactactagttttagtcatgg 549
           ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |
Sbjct: 240 tctgcccaagctggggtcttcaagaaggcaaatgaattccactactaattttagtcattg 181

                                    
Query: 550 gtgtttcttggctaaatttcttcct 574
           |||||||||||||||||||||||||
Sbjct: 180 gtgtttcttggctaaatttcttcct 156



 Score =  202 bits (102), Expect = 9e-49
 Identities = 134/145 (92%), Gaps = 6/145 (4%)
 Strand = Plus / Minus

                                                                       
Query: 1   actccctcgcatgggtcaggaggaggctacaacccgacaccgacaccaacttacggtact 60
           |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 747 actcccacgcatgggtcaggaggaggctacaatccgacaccgacaccaacttacggcact 688

                                                                       
Query: 61  acaccaacgccgacgccatcttacggcactacaccgacgccatcttatggcactacaccg 120
           |||||      ||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 687 acacc------gacgccatcttacggcactacaccgacgccaacttacggcactacaccg 634

                                    
Query: 121 acgccatcttacggcactacaccga 145
           |||||||||||||||||||||||||
Sbjct: 633 acgccatcttacggcactacaccga 609
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>ref|XM_464784.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 660

 Score =  323 bits (163), Expect = 4e-85
 Identities = 387/462 (83%), Gaps = 6/462 (1%)
 Strand = Plus / Plus

                                                                       
Query: 76  ccatcttacggcactacaccgacgccatcttatggcactacaccgacgccatcttacggc 135
           |||||||| ||||||||||| || |||||||| ||||||||||| || ||||||||||||
Sbjct: 205 ccatcttatggcactacaccaacaccatcttacggcactacaccaacaccatcttacggc 264

                                                                       
Query: 136 actacaccgagcaccccaagtacaccttcccatgaagtccctgcaagtccaaagaagcat 195
           || ||||| |||||||| || |||||      ||| ||||||| |  ||| |  ||||||
Sbjct: 265 acgacaccaagcacccccagcacacc------tgatgtccctgaagttccgacaaagcat 318

                                                                       
Query: 196 ggattcattggatcctgcgacttctggaagaatcacccagacgctataattgcagctatt 255
           |  |||  |||||||||||| | ||||||||| || ||||| | ||| ||  ||||||||
Sbjct: 319 gatttctgtggatcctgcgattactggaagaaccatccagatgttatcatctcagctatt 378

                                                                       
Query: 256 gggtcccttggcaacatcggcaagacatttggtgctgcatgcagtatgataggtggcaag 315
           |||||||||||| |||| ||||||||| | ||| |||| |||||| ||||   |||||||
Sbjct: 379 gggtcccttggcgacattggcaagacactcggtactgcttgcagtttgatcactggcaag 438

                                                                       
Query: 316 aagctaggaaatatgcatgatgcactctcaaacactagaactgatggtattggcgccctg 375
           ||||||| |||| | ||||||||||| ||||||||| |||||||||||| ||| || |||
Sbjct: 439 aagctagaaaatcttcatgatgcactttcaaacactggaactgatggtactggtgctctg 498

                                                                       
Query: 376 atacgcgagggggcagctgcatacctcaactccattgtgaacaacaagttcccatttaca 435
            | |||||||| |||||||||||||||||||||||||||||||| || ||||| ||||| 
Sbjct: 499 ctccgcgagggagcagctgcatacctcaactccattgtgaacaagaaattcccttttacc 558

                                                                       
Query: 436 acccagcaggtgaaggactgcatcgtcgtggccgcgacctctgatagtgctgcttctgcc 495
           ||||| ||||| ||||| |||||||||||||||  |||||||||| | ||||||||| ||
Sbjct: 559 acccaacaggttaaggattgcatcgtcgtggccatgacctctgatggcgctgcttcttcc 618

                                                     
Query: 496 caagctggggtcttcaagaaggcaaatgaatcccactactag 537
           || |||| | ||||||||||||||||||| |  |||||||||
Sbjct: 619 caggctgagatcttcaagaaggcaaatgattatcactactag 660



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 74/83 (89%)
 Strand = Plus / Plus

                                                                       
Query: 61  acaccaacgccgacgccatcttacggcactacaccgacgccatcttatggcactacaccg 120
           |||||||| || || ||| |||||||| ||||||| || |||||||||||||||||||| 
Sbjct: 166 acaccaaccccaacaccagcttacggctctacaccaacaccatcttatggcactacacca 225

                                  
Query: 121 acgccatcttacggcactacacc 143
           || ||||||||||||||||||||
Sbjct: 226 acaccatcttacggcactacacc 248



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 37  acaccgacaccaacttacggtactacaccaac 68
           ||||| |||||| ||||||| |||||||||||
Sbjct: 220 acaccaacaccatcttacggcactacaccaac 251
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>gb|AY568677.1| Oryza sativa (japonica cultivar-group) proline- and threonine-rich
           protein mRNA, complete cds
          Length = 902

 Score =  303 bits (153), Expect = 3e-79
 Identities = 386/464 (83%), Gaps = 6/464 (1%)
 Strand = Plus / Plus

                                                                       
Query: 76  ccatcttacggcactacaccgacgccatcttatggcactacaccgacgccatcttacggc 135
           |||||||| ||||||||||| || |||||||| ||||||||||| || ||||||||||||
Sbjct: 269 ccatcttatggcactacaccaacaccatcttacggcactacaccaacaccatcttacggc 328

                                                                       
Query: 136 actacaccgagcaccccaagtacaccttcccatgaagtccctgcaagtccaaagaagcat 195
           || ||||| ||| |||| || |||||      ||| ||||||| |  ||| |  ||||||
Sbjct: 329 acgacaccaagctcccccagcacacc------tgatgtccctgaagttccgacaaagcat 382

                                                                       
Query: 196 ggattcattggatcctgcgacttctggaagaatcacccagacgctataattgcagctatt 255
           |  |||  |||||||||||| | ||||||||| || ||||| | ||| ||  ||||||||
Sbjct: 383 gatttctgtggatcctgcgattactggaagaaccatccagatgttatcatctcagctatt 442

                                                                       
Query: 256 gggtcccttggcaacatcggcaagacatttggtgctgcatgcagtatgataggtggcaag 315
           |||||||||||| |||| |||| |||| | | | |||| |||||| ||||   |||||||
Sbjct: 443 gggtcccttggcgacattggcatgacactcgatactgcttgcagtttgatcactggcaag 502

                                                                       
Query: 316 aagctaggaaatatgcatgatgcactctcaaacactagaactgatggtattggcgccctg 375
           ||||||| |||| | ||||||||||| ||||||||| |||||||||||| ||| || |||
Sbjct: 503 aagctagaaaatcttcatgatgcactttcaaacactggaactgatggtactggtgctctg 562

                                                                       
Query: 376 atacgcgagggggcagctgcatacctcaactccattgtgaacaacaagttcccatttaca 435
            | |||||||| |||||||||||||||||||||||||||||||| || ||||| ||||| 
Sbjct: 563 ctccgcgagggagcagctgcatacctcaactccattgtgaacaagaaattcccttttacc 622

                                                                       
Query: 436 acccagcaggtgaaggactgcatcgtcgtggccgcgacctctgatagtgctgcttctgcc 495
           ||||| ||||| ||||| |||||||||||||||  |||||||||| | ||||||||| ||
Sbjct: 623 acccaacaggttaaggattgcatcgtcgtggccatgacctctgatggcgctgcttcttcc 682

                                                       
Query: 496 caagctggggtcttcaagaaggcaaatgaatcccactactagtt 539
           || |||| | ||||||||||||||||||| |  |||||||||||
Sbjct: 683 caggctgagatcttcaagaaggcaaatgattatcactactagtt 726



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 74/83 (89%)
 Strand = Plus / Plus

                                                                       
Query: 61  acaccaacgccgacgccatcttacggcactacaccgacgccatcttatggcactacaccg 120
           |||||||| || || ||| |||||||| ||||||| || |||||||||||||||||||| 
Sbjct: 230 acaccaaccccaacaccagcttacggctctacaccaacaccatcttatggcactacacca 289

                                  
Query: 121 acgccatcttacggcactacacc 143
           || ||||||||||||||||||||
Sbjct: 290 acaccatcttacggcactacacc 312



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 37  acaccgacaccaacttacggtactacaccaac 68
           ||||| |||||| ||||||| |||||||||||
Sbjct: 284 acaccaacaccatcttacggcactacaccaac 315
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  272 bits (137), Expect = 1e-69
 Identities = 275/321 (85%)
 Strand = Plus / Minus

                                                                           
Query: 219     ctggaagaatcacccagacgctataattgcagctattgggtcccttggcaacatcggcaa 278
               ||||||||| || ||||| | ||| ||  |||||||||||||||||||| |||| |||||
Sbjct: 7323474 ctggaagaaccatccagatgttatcatctcagctattgggtcccttggcgacattggcaa 7323415

                                                                           
Query: 279     gacatttggtgctgcatgcagtatgataggtggcaagaagctaggaaatatgcatgatgc 338
               |||| | ||| |||| |||||| ||||   |||||||||||||| |||| | ||||||||
Sbjct: 7323414 gacactcggtactgcttgcagtttgatcactggcaagaagctagaaaatcttcatgatgc 7323355

                                                                           
Query: 339     actctcaaacactagaactgatggtattggcgccctgatacgcgagggggcagctgcata 398
               ||| ||||||||| |||||||||||| ||| || ||| | |||||||| |||||||||||
Sbjct: 7323354 actttcaaacactggaactgatggtactggtgctctgctccgcgagggagcagctgcata 7323295

                                                                           
Query: 399     cctcaactccattgtgaacaacaagttcccatttacaacccagcaggtgaaggactgcat 458
               ||||||||||||||||||||| || ||||| ||||| ||||| ||||| ||||| |||||
Sbjct: 7323294 cctcaactccattgtgaacaagaaattcccttttaccacccaacaggttaaggattgcat 7323235

                                                                           
Query: 459     cgtcgtggccgcgacctctgatagtgctgcttctgcccaagctggggtcttcaagaaggc 518
               ||||||||||  |||||||||| | ||||||||| |||| |||| | |||||||||||||
Sbjct: 7323234 cgtcgtggccatgacctctgatggcgctgcttcttcccaggctgagatcttcaagaaggc 7323175

                                    
Query: 519     aaatgaatcccactactagtt 539
               |||||| |  |||||||||||
Sbjct: 7323174 aaatgattatcactactagtt 7323154



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                           
Query: 61      acaccaacgccgacgccatcttacggcactacaccgacgccatcttatggcactacaccg 120
               |||||||| || || ||| |||||||| ||||||| || |||||||||||||||||||| 
Sbjct: 7323735 acaccaaccccaacaccagcttacggctctacaccaacaccatcttatggcactacacca 7323676

                                      
Query: 121     acgccatcttacggcactacacc 143
               || ||||||||||||||||||||
Sbjct: 7323675 acaccatcttacggcactacacc 7323653



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 77/87 (88%)
 Strand = Plus / Minus

                                                                           
Query: 76      ccatcttacggcactacaccgacgccatcttatggcactacaccgacgccatcttacggc 135
               |||||||| ||||||||||| || |||||||| ||||||||||| || ||||||||||||
Sbjct: 7323696 ccatcttatggcactacaccaacaccatcttacggcactacaccaacaccatcttacggc 7323637

                                          
Query: 136     actacaccgagcaccccaagtacacct 162
               || ||||| |||||||| || ||||||
Sbjct: 7323636 acgacaccaagcacccccagcacacct 7323610



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 37      acaccgacaccaacttacggtactacaccaac 68
               ||||| |||||| ||||||| |||||||||||
Sbjct: 7323681 acaccaacaccatcttacggcactacaccaac 7323650
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>dbj|AP005756.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0035N08
          Length = 136267

 Score =  272 bits (137), Expect = 1e-69
 Identities = 275/321 (85%)
 Strand = Plus / Minus

                                                                         
Query: 219   ctggaagaatcacccagacgctataattgcagctattgggtcccttggcaacatcggcaa 278
             ||||||||| || ||||| | ||| ||  |||||||||||||||||||| |||| |||||
Sbjct: 99282 ctggaagaaccatccagatgttatcatctcagctattgggtcccttggcgacattggcaa 99223

                                                                         
Query: 279   gacatttggtgctgcatgcagtatgataggtggcaagaagctaggaaatatgcatgatgc 338
             |||| | ||| |||| |||||| ||||   |||||||||||||| |||| | ||||||||
Sbjct: 99222 gacactcggtactgcttgcagtttgatcactggcaagaagctagaaaatcttcatgatgc 99163

                                                                         
Query: 339   actctcaaacactagaactgatggtattggcgccctgatacgcgagggggcagctgcata 398
             ||| ||||||||| |||||||||||| ||| || ||| | |||||||| |||||||||||
Sbjct: 99162 actttcaaacactggaactgatggtactggtgctctgctccgcgagggagcagctgcata 99103

                                                                         
Query: 399   cctcaactccattgtgaacaacaagttcccatttacaacccagcaggtgaaggactgcat 458
             ||||||||||||||||||||| || ||||| ||||| ||||| ||||| ||||| |||||
Sbjct: 99102 cctcaactccattgtgaacaagaaattcccttttaccacccaacaggttaaggattgcat 99043

                                                                         
Query: 459   cgtcgtggccgcgacctctgatagtgctgcttctgcccaagctggggtcttcaagaaggc 518
             ||||||||||  |||||||||| | ||||||||| |||| |||| | |||||||||||||
Sbjct: 99042 cgtcgtggccatgacctctgatggcgctgcttcttcccaggctgagatcttcaagaaggc 98983

                                  
Query: 519   aaatgaatcccactactagtt 539
             |||||| |  |||||||||||
Sbjct: 98982 aaatgattatcactactagtt 98962



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                         
Query: 61    acaccaacgccgacgccatcttacggcactacaccgacgccatcttatggcactacaccg 120
             |||||||| || || ||| |||||||| ||||||| || |||||||||||||||||||| 
Sbjct: 99543 acaccaaccccaacaccagcttacggctctacaccaacaccatcttatggcactacacca 99484

                                    
Query: 121   acgccatcttacggcactacacc 143
             || ||||||||||||||||||||
Sbjct: 99483 acaccatcttacggcactacacc 99461



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 77/87 (88%)
 Strand = Plus / Minus

                                                                         
Query: 76    ccatcttacggcactacaccgacgccatcttatggcactacaccgacgccatcttacggc 135
             |||||||| ||||||||||| || |||||||| ||||||||||| || ||||||||||||
Sbjct: 99504 ccatcttatggcactacaccaacaccatcttacggcactacaccaacaccatcttacggc 99445

                                        
Query: 136   actacaccgagcaccccaagtacacct 162
             || ||||| |||||||| || ||||||
Sbjct: 99444 acgacaccaagcacccccagcacacct 99418



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 37    acaccgacaccaacttacggtactacaccaac 68
             ||||| |||||| ||||||| |||||||||||
Sbjct: 99489 acaccaacaccatcttacggcactacaccaac 99458
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>dbj|AK058752.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-H10, full
           insert sequence
          Length = 377

 Score =  228 bits (115), Expect = 2e-56
 Identities = 202/231 (87%)
 Strand = Plus / Plus

                                                                       
Query: 309 tggcaagaagctaggaaatatgcatgatgcactctcaaacactagaactgatggtattgg 368
           |||||||||||||| |||| | ||||||||||| ||||||||| |||||||||||| |||
Sbjct: 9   tggcaagaagctagaaaatcttcatgatgcactttcaaacactggaactgatggtactgg 68

                                                                       
Query: 369 cgccctgatacgcgagggggcagctgcatacctcaactccattgtgaacaacaagttccc 428
            || ||| | |||||||| |||||||||||||||||||||||||||||||| || |||||
Sbjct: 69  tgctctgctccgcgagggagcagctgcatacctcaactccattgtgaacaagaaattccc 128

                                                                       
Query: 429 atttacaacccagcaggtgaaggactgcatcgtcgtggccgcgacctctgatagtgctgc 488
            ||||| ||||| ||||| ||||| |||||||||||||||  |||||||||| | |||||
Sbjct: 129 ttttaccacccaacaggttaaggattgcatcgtcgtggccatgacctctgatggcgctgc 188

                                                              
Query: 489 ttctgcccaagctggggtcttcaagaaggcaaatgaatcccactactagtt 539
           |||| |||| |||| | ||||||||||||||||||| |  |||||||||||
Sbjct: 189 ttcttcccaggctgagatcttcaagaaggcaaatgattatcactactagtt 239
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>ref|NM_191846.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1944

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                  
Query: 400  ctcaactccattgtgaacaacaagttcccatttacaacccagcaggtgaaggac 453
            ||||||||||| ||||||| || |||||| || || || |||||||||||||||
Sbjct: 1795 ctcaactccatggtgaacagcaggttccccttcaccacgcagcaggtgaaggac 1848
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                      
Query: 400      ctcaactccattgtgaacaacaagttcccatttacaacccagcaggtgaaggac 453
                ||||||||||| ||||||| || |||||| || || || |||||||||||||||
Sbjct: 30289314 ctcaactccatggtgaacagcaggttccccttcaccacgcagcaggtgaaggac 30289367
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>dbj|AP003343.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0042A10
          Length = 146840

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                   
Query: 400   ctcaactccattgtgaacaacaagttcccatttacaacccagcaggtgaaggac 453
             ||||||||||| ||||||| || |||||| || || || |||||||||||||||
Sbjct: 77633 ctcaactccatggtgaacagcaggttccccttcaccacgcagcaggtgaaggac 77686
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>dbj|AK100192.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036E12, full
            insert sequence
          Length = 2368

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                  
Query: 400  ctcaactccattgtgaacaacaagttcccatttacaacccagcaggtgaaggac 453
            ||||||||||| ||||||| || |||||| || || || |||||||||||||||
Sbjct: 1884 ctcaactccatggtgaacagcaggttccccttcaccacgcagcaggtgaaggac 1937
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>gb|AC010242.7| Homo sapiens chromosome 5 clone CTC-359E10, complete sequence
          Length = 174293

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 183   tccaaagaagcatggattcattg 205
             |||||||||||||||||||||||
Sbjct: 29024 tccaaagaagcatggattcattg 29046
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>gb|AC008816.8| Homo sapiens chromosome 5 clone CTD-2122K17, complete sequence
          Length = 174293

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 183   tccaaagaagcatggattcattg 205
             |||||||||||||||||||||||
Sbjct: 29024 tccaaagaagcatggattcattg 29046
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>gb|AC010280.7| Homo sapiens chromosome 5 clone CTC-537E7, complete sequence
          Length = 133790

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 183   tccaaagaagcatggattcattg 205
             |||||||||||||||||||||||
Sbjct: 43691 tccaaagaagcatggattcattg 43669
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>gb|AC017093.3|AC017093 Homo sapiens BAC clone RP11-511G7 from 5, complete sequence
          Length = 203043

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 183   tccaaagaagcatggattcattg 205
             |||||||||||||||||||||||
Sbjct: 91385 tccaaagaagcatggattcattg 91407
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>gb|AC010157.12| Homo sapiens chromosome 10 clone RP11-202D18, complete sequence
          Length = 160310

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 508   ttcaagaaggcaaatgaatccc 529
             ||||||||||||||||||||||
Sbjct: 91242 ttcaagaaggcaaatgaatccc 91263
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>gb|AC118627.6| Mus musculus chromosome 15, clone RP24-91E8, complete sequence
          Length = 256158

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 159    accttcccatgaagtccctgc 179
              |||||||||||||||||||||
Sbjct: 115173 accttcccatgaagtccctgc 115193
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>gb|AY582740.1| Chlamydomonas reinhardtii Fe-hydrogenase assembly protein (HydG)
           mRNA, complete cds
          Length = 1704

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 143 cgagcaccccaagtacacctt 163
           |||||||||||||||||||||
Sbjct: 675 cgagcaccccaagtacacctt 695
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>ref|XM_451567.1| Kluyveromyces lactis NRRL Y-1140, KLLA0B00825g predicted mRNA
          Length = 1185

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 415 aacaacaagttcccatttaca 435
           |||||||||||||||||||||
Sbjct: 380 aacaacaagttcccatttaca 360
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>gb|AC129886.3| Atelerix albiventris clone LB4-234A16, complete sequence
          Length = 176448

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 334   gatgcactctcaaacactagaactg 358
             ||||||||||||||| |||||||||
Sbjct: 18448 gatgcactctcaaactctagaactg 18472



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 334   gatgcactctcaaacactagaactg 358
             ||||||||||||||| |||||||||
Sbjct: 17278 gatgcactctcaaactctagaactg 17254
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>emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL
             Y-1140 of Kluyveromyces lactis
          Length = 1320834

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 415   aacaacaagttcccatttaca 435
             |||||||||||||||||||||
Sbjct: 64663 aacaacaagttcccatttaca 64643
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>gb|AC159301.2| Mus musculus BAC clone RP23-213B1 from chromosome 13, complete sequence
          Length = 188633

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 315    gaagctaggaaatatgcatga 335
              |||||||||||||||||||||
Sbjct: 108440 gaagctaggaaatatgcatga 108420
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>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold
          Length = 2136267

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 334    gatgcactctcaaacactagaactg 358
              ||||||||||||||| |||||||||
Sbjct: 627720 gatgcactctcaaactctagaactg 627744



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 334    gatgcactctcaaacactagaactg 358
              ||||||||||||||| |||||||||
Sbjct: 626550 gatgcactctcaaactctagaactg 626526
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>gb|AC102545.9| Mus musculus chromosome 9, clone RP23-118J13, complete sequence
          Length = 241789

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 542    agtcatgggtgtttcttggc 561
              ||||||||||||||||||||
Sbjct: 212278 agtcatgggtgtttcttggc 212259
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>gb|AC007245.3| Homo sapiens BAC clone RP11-273L18 from 7, complete sequence
          Length = 133137

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 556    cttggctaaatttcttccta 575
              ||||||||||||||||||||
Sbjct: 108453 cttggctaaatttcttccta 108434
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>emb|CT025841.2| Medicago truncatula chromosome 5 clone mth2-131j21, COMPLETE SEQUENCE
          Length = 122251

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 419   acaagttcccatttacaacc 438
             ||||||||||||||||||||
Sbjct: 48921 acaagttcccatttacaacc 48940
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>gb|AC010099.10| Homo sapiens BAC clone RP11-420H19 from 7, complete sequence
          Length = 154836

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 550    gtgtttcttggctaaatttc 569
              ||||||||||||||||||||
Sbjct: 123872 gtgtttcttggctaaatttc 123891
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>emb|AL161517.2|ATCHRIV29 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 29
          Length = 199861

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 552    gtttcttggctaaatttctt 571
              ||||||||||||||||||||
Sbjct: 139902 gtttcttggctaaatttctt 139883
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>emb|AL049524.1|ATF7L13 Arabidopsis thaliana DNA chromosome 4, BAC clone  F7L13 (ESSA project)
          Length = 95076

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 552   gtttcttggctaaatttctt 571
             ||||||||||||||||||||
Sbjct: 79939 gtttcttggctaaatttctt 79920
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>gb|AY113188.1| Mastigamoeba balamuthi aldehyde-alcohol dehydrogenase E (aadhE1)
            gene, partial cds
          Length = 3207

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 378  acgcgagggggcagctgcat 397
            ||||||||||||||||||||
Sbjct: 1738 acgcgagggggcagctgcat 1719
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>gb|AC148763.14| Medicago truncatula clone mth2-29o24, complete sequence
          Length = 104879

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    aacccgacaccgacaccaac 50
             ||||||||||||||||||||
Sbjct: 15886 aacccgacaccgacaccaac 15867
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>emb|BX470154.5| Zebrafish DNA sequence from clone CH211-81N22, complete sequence
          Length = 158249

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 285    tggtgctgcatgcagtatga 304
              ||||||||||||||||||||
Sbjct: 114553 tggtgctgcatgcagtatga 114572
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>gb|AC093597.3| Homo sapiens BAC clone RP11-187O17 from 4, complete sequence
          Length = 17211

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 159   accttcccatgaagtccctg 178
             ||||||||||||||||||||
Sbjct: 10846 accttcccatgaagtccctg 10827
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 454     tgcatcgtcgtggccgcgac 473
               ||||||||||||||||||||
Sbjct: 5059903 tgcatcgtcgtggccgcgac 5059884
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>gb|AF118222.1|F3H7 Arabidopsis thaliana BAC F3H7
          Length = 102216

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 552   gtttcttggctaaatttctt 571
             ||||||||||||||||||||
Sbjct: 66724 gtttcttggctaaatttctt 66743
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>gb|AF142686.1| Cyclolobium nutans maturase-like protein (matK) gene, complete cds;
           chloroplast gene for chloroplast product
          Length = 2503

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 185 caaagaagcatggattcattggat 208
           |||||||||| |||||||||||||
Sbjct: 701 caaagaagcagggattcattggat 678
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>gb|AC006120.1|AC006120 Homo sapiens chromosome 17, clone hRPK.346_K_10, complete sequence
          Length = 168753

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 556   cttggctaaatttcttccta 575
             ||||||||||||||||||||
Sbjct: 66354 cttggctaaatttcttccta 66335
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>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome
          Length = 4096345

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 187     aagaagcatggattcattgg 206
               ||||||||||||||||||||
Sbjct: 2827466 aagaagcatggattcattgg 2827485
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>gb|AC155302.2| Mus musculus BAC clone RP24-227A11 from chromosome 13, complete
             sequence
          Length = 152447

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 491   ctgcccaagctggggtcttc 510
             ||||||||||||||||||||
Sbjct: 61062 ctgcccaagctggggtcttc 61081
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>gb|AC140392.3| Mus musculus BAC clone RP24-89F9 from chromosome 9, complete sequence
          Length = 225973

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 542   agtcatgggtgtttcttggc 561
             ||||||||||||||||||||
Sbjct: 26192 agtcatgggtgtttcttggc 26173


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,316,250
Number of Sequences: 3902068
Number of extensions: 4316250
Number of successful extensions: 71571
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71426
Number of HSP's gapped (non-prelim): 130
length of query: 575
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 552
effective length of database: 17,143,297,704
effective search space: 9463100332608
effective search space used: 9463100332608
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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