ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bags33a24 |
|---|---|
| Clone Library Name | barley_pub |
>CAZ_DROME (Q27294) RNA-binding protein cabeza (Sarcoma-associated RNA-binding| fly homolog) (P19) Length = 399 Score = 45.8 bits (107), Expect = 1e-04 Identities = 16/29 (55%), Positives = 19/29 (65%) Frame = +2 Query: 23 PRAGDWICNGCSNNNYASRKNCKKCNLPK 109 PR GDW CN C+N N+A R C +C PK Sbjct: 274 PRDGDWKCNSCNNTNFAWRNECNRCKTPK 302
>NRP1_YEAST (P32770) Asparagine-rich protein (Protein ARP)| Length = 719 Score = 43.9 bits (102), Expect = 4e-04 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%) Frame = +2 Query: 359 RSGDWLC-SCGFHNYSSRAQCKECNAPVPSGMASTTMKSTGADSSSTLGNKRLASEELAN 535 R GDW C SCGF N+ R C C+ P PS T A+S++ + + R N Sbjct: 355 RPGDWNCPSCGFSNFQRRTACFRCSFPAPSNSQIHT-----ANSNNNVNSSRNNLNNRVN 409 Query: 536 DWDNKRLNPGNANYP 580 + ++ AN+P Sbjct: 410 SGSSSNISNTAANHP 424 Score = 38.9 bits (89), Expect = 0.013 Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 6/79 (7%) Frame = +2 Query: 356 WRSGDWLCS-CGFHNYSSRAQCKECNAPVP-SGMASTTM----KSTGADSSSTLGNKRLA 517 +R+GDW CS C +HN++ C C P SG AS T ST +S T N ++ Sbjct: 580 FRAGDWKCSTCTYHNFAKNVVCLRCGGPKSISGDASETNHYIDSSTFGPASRTPSNNNIS 639 Query: 518 SEELANDWDNKRLNPGNAN 574 N N GN N Sbjct: 640 VN--TNGGSNAGRTDGNDN 656 Score = 36.2 bits (82), Expect = 0.081 Identities = 25/90 (27%), Positives = 33/90 (36%) Frame = +2 Query: 2 FGTRKWLPRAGDWICNGCSNNNYASRKNCKKCNLPKEEAAMPQLSMGGMMPAYADYMARV 181 F K PR GDW C C +N+ R C +C+ P + Q+ + Sbjct: 347 FPQSKNKPRPGDWNCPSCGFSNFQRRTACFRCSFPAPSNS--QIHTANSNNNVNSSRNNL 404 Query: 182 Q*IANAGYKMNFGNPAMQQQLLANANWPYG 271 N+G N N A AN PYG Sbjct: 405 NNRVNSGSSSNISNTA--------ANHPYG 426 Score = 35.4 bits (80), Expect = 0.14 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = +2 Query: 26 RAGDWICNGCSNNNYASRKNCKKCNLPK 109 RAGDW C+ C+ +N+A C +C PK Sbjct: 581 RAGDWKCSTCTYHNFAKNVVCLRCGGPK 608
>RBP56_HUMAN (Q92804) TATA-binding protein-associated factor 2N (RNA-binding| protein 56) (TAFII68) (TAF(II)68) Length = 592 Score = 43.5 bits (101), Expect = 5e-04 Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 2/37 (5%) Frame = +2 Query: 23 PRAGDWICNG--CSNNNYASRKNCKKCNLPKEEAAMP 127 P++GDW+C C N N+A R +C +CN P+ E + P Sbjct: 353 PKSGDWVCPNPSCGNMNFARRNSCNQCNEPRPEDSRP 389 Score = 42.7 bits (99), Expect = 9e-04 Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 3/39 (7%) Frame = +2 Query: 335 FQGVPKDWRSGDWLC---SCGFHNYSSRAQCKECNAPVP 442 FQG D +SGDW+C SCG N++ R C +CN P P Sbjct: 346 FQGRGGDPKSGDWVCPNPSCGNMNFARRNSCNQCNEPRP 384
>EWS_HUMAN (Q01844) RNA-binding protein EWS (EWS oncogene) (Ewing sarcoma| breakpoint region 1 protein) Length = 656 Score = 42.7 bits (99), Expect = 9e-04 Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 2/36 (5%) Frame = +2 Query: 26 RAGDWICN--GCSNNNYASRKNCKKCNLPKEEAAMP 127 RAGDW C GC N N+A R C +C PK E +P Sbjct: 518 RAGDWQCPNPGCGNQNFAWRTECNQCKAPKPEGFLP 553 Score = 42.0 bits (97), Expect = 0.001 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 3/59 (5%) Frame = +2 Query: 317 GNSTNQFQGVPKDWRSGDWLC---SCGFHNYSSRAQCKECNAPVPSGMASTTMKSTGAD 484 G+ N G R+GDW C CG N++ R +C +C AP P G G D Sbjct: 504 GSRGNPSGGGNVQHRAGDWQCPNPGCGNQNFAWRTECNQCKAPKPEGFLPPPFPPPGGD 562
>EWS_MOUSE (Q61545) RNA-binding protein EWS| Length = 655 Score = 42.7 bits (99), Expect = 9e-04 Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 2/36 (5%) Frame = +2 Query: 26 RAGDWICN--GCSNNNYASRKNCKKCNLPKEEAAMP 127 RAGDW C GC N N+A R C +C PK E +P Sbjct: 517 RAGDWQCPNPGCGNQNFAWRTECNQCKAPKPEGFLP 552 Score = 42.0 bits (97), Expect = 0.001 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 3/59 (5%) Frame = +2 Query: 317 GNSTNQFQGVPKDWRSGDWLC---SCGFHNYSSRAQCKECNAPVPSGMASTTMKSTGAD 484 G+ N G R+GDW C CG N++ R +C +C AP P G G D Sbjct: 503 GSRGNPSGGGNVQHRAGDWQCPNPGCGNQNFAWRTECNQCKAPKPEGFLPPPFPPPGGD 561
>ZN265_RAT (O35986) Zinc finger protein 265 (Zinc finger, splicing)| Length = 332 Score = 40.8 bits (94), Expect = 0.003 Identities = 17/39 (43%), Positives = 19/39 (48%) Frame = +2 Query: 29 AGDWICNGCSNNNYASRKNCKKCNLPKEEAAMPQLSMGG 145 A DW C CSN N+A R C CN PK + GG Sbjct: 66 ANDWQCKTCSNVNWARRSECNMCNTPKYAKLEERTGYGG 104 Score = 33.1 bits (74), Expect = 0.69 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 2/40 (5%) Frame = +2 Query: 8 TRKWLPRAGDWIC--NGCSNNNYASRKNCKKCNLPKEEAA 121 T+ + GDWIC C N N+A R +C +C K A Sbjct: 3 TKNFRVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEA 42
>ZN265_HUMAN (O95218) Zinc finger protein 265 (Zinc finger, splicing)| Length = 337 Score = 40.8 bits (94), Expect = 0.003 Identities = 17/39 (43%), Positives = 19/39 (48%) Frame = +2 Query: 29 AGDWICNGCSNNNYASRKNCKKCNLPKEEAAMPQLSMGG 145 A DW C CSN N+A R C CN PK + GG Sbjct: 66 ANDWQCKTCSNVNWARRSECNMCNTPKYAKLEERTGYGG 104 Score = 33.1 bits (74), Expect = 0.69 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 2/40 (5%) Frame = +2 Query: 8 TRKWLPRAGDWIC--NGCSNNNYASRKNCKKCNLPKEEAA 121 T+ + GDWIC C N N+A R +C +C K A Sbjct: 3 TKNFRVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEA 42
>RBM10_HUMAN (P98175) RNA-binding protein 10 (RNA-binding motif protein 10)| (DXS8237E) Length = 929 Score = 40.4 bits (93), Expect = 0.004 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +2 Query: 35 DWICNGCSNNNYASRKNCKKCNLPKEEA 118 DW+CN C N+ R+ C KC +PK EA Sbjct: 216 DWLCNKCGVQNFKRREKCFKCGVPKSEA 243
>RBM10_RAT (P70501) RNA-binding protein 10 (RNA-binding motif protein 10)| (S1-1 protein) Length = 852 Score = 40.4 bits (93), Expect = 0.004 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +2 Query: 35 DWICNGCSNNNYASRKNCKKCNLPKEEA 118 DW+CN C N+ R+ C KC +PK EA Sbjct: 139 DWLCNKCGVQNFKRREKCFKCGVPKSEA 166
>ZN265_MOUSE (Q9R020) Zinc finger protein 265 (Zinc finger, splicing) (Fragment)| Length = 326 Score = 40.4 bits (93), Expect = 0.004 Identities = 17/39 (43%), Positives = 19/39 (48%) Frame = +2 Query: 29 AGDWICNGCSNNNYASRKNCKKCNLPKEEAAMPQLSMGG 145 A DW C CSN N+A R C CN PK + GG Sbjct: 66 ANDWQCKTCSNVNWARRSECDMCNTPKYAKLEERTGYGG 104 Score = 33.1 bits (74), Expect = 0.69 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 2/40 (5%) Frame = +2 Query: 8 TRKWLPRAGDWIC--NGCSNNNYASRKNCKKCNLPKEEAA 121 T+ + GDWIC C N N+A R +C +C K A Sbjct: 3 TKNFRVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEA 42
>YZR3_ARATH (Q8GZ43) RanBP2-type zinc-finger protein At1g67325| Length = 288 Score = 36.6 bits (83), Expect = 0.062 Identities = 59/249 (23%), Positives = 84/249 (33%), Gaps = 64/249 (25%) Frame = +2 Query: 26 RAGDWICNGCSNNNYASRKNC--KKCNLPK------EEAAMPQ------------LSMGG 145 R DWIC C N N++ R C + C P+ + A P L GG Sbjct: 22 REDDWICPSCGNVNFSFRTTCNMRNCTQPRPADHNGKSAPKPMQHQQGFSSPGAYLGSGG 81 Query: 146 MMPAYADYMARVQ*IANAG----YKMNF--GNP---AMQQQLLANANW---------PY- 268 P Y + N Y + F G+P ++ A A++ PY Sbjct: 82 PPPVYMGGSPYGSPLFNGSSMPPYDVPFSGGSPYHFNYNSRMPAGAHYRPLHMSGPPPYH 141 Query: 269 -----GVAARYGMQSSLWQF------AGNSTNQFQGVPKDW-----------RSGDWLC- 379 G YGM + ++ S P+ + R DW C Sbjct: 142 GGSMMGSGGMYGMPPPIDRYGLGMAMGPGSAAAMMPRPRFYPDEKSQKRDSTRDNDWTCP 201 Query: 380 SCGFHNYSSRAQC--KECNAPVPSGMASTTMKSTGADSSSTLGNKRLASEELANDWDNKR 553 +CG N+S R C ++CN P P S G+ S++ A + K Sbjct: 202 NCGNVNFSFRTVCNMRKCNTPKP--------------GSQQGGSSDKISKQNAPEGSWKC 247 Query: 554 LNPGNANYP 580 N GN NYP Sbjct: 248 DNCGNINYP 256 Score = 33.9 bits (76), Expect = 0.40 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%) Frame = +2 Query: 26 RAGDWICNGCSNNNYASRKNC--KKCNLPK 109 R DW C C N N++ R C +KCN PK Sbjct: 194 RDNDWTCPNCGNVNFSFRTVCNMRKCNTPK 223 Score = 29.6 bits (65), Expect = 7.6 Identities = 10/23 (43%), Positives = 12/23 (52%) Frame = +2 Query: 32 GDWICNGCSNNNYASRKNCKKCN 100 G W C+ C N NY R C + N Sbjct: 243 GSWKCDNCGNINYPFRSKCNRQN 265
>FUS_MOUSE (P56959) RNA-binding protein FUS (Pigpen protein)| Length = 518 Score = 36.2 bits (82), Expect = 0.081 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 3/33 (9%) Frame = +2 Query: 359 RSGDWLC---SCGFHNYSSRAQCKECNAPVPSG 448 R+GDW C +C N+S R +C +C AP P G Sbjct: 415 RAGDWKCPNPTCENMNFSWRNECNQCKAPKPDG 447 Score = 35.0 bits (79), Expect = 0.18 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%) Frame = +2 Query: 26 RAGDWICNG--CSNNNYASRKNCKKCNLPKEE 115 RAGDW C C N N++ R C +C PK + Sbjct: 415 RAGDWKCPNPTCENMNFSWRNECNQCKAPKPD 446
>FUS_HUMAN (P35637) RNA-binding protein FUS (Oncogene FUS) (Oncogene TLS)| (Translocated in liposarcoma protein) (POMp75) (75 kDa DNA-pairing protein) Length = 526 Score = 36.2 bits (82), Expect = 0.081 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 3/33 (9%) Frame = +2 Query: 359 RSGDWLC---SCGFHNYSSRAQCKECNAPVPSG 448 R+GDW C +C N+S R +C +C AP P G Sbjct: 422 RAGDWKCPNPTCENMNFSWRNECNQCKAPKPDG 454 Score = 35.0 bits (79), Expect = 0.18 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%) Frame = +2 Query: 26 RAGDWICNG--CSNNNYASRKNCKKCNLPKEE 115 RAGDW C C N N++ R C +C PK + Sbjct: 422 RAGDWKCPNPTCENMNFSWRNECNQCKAPKPD 453
>FUS_BOVIN (Q28009) RNA-binding protein FUS (Pigpen protein)| Length = 512 Score = 36.2 bits (82), Expect = 0.081 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 3/33 (9%) Frame = +2 Query: 359 RSGDWLC---SCGFHNYSSRAQCKECNAPVPSG 448 R+GDW C +C N+S R +C +C AP P G Sbjct: 408 RAGDWKCPNPTCENMNFSWRNECNQCKAPKPDG 440 Score = 35.0 bits (79), Expect = 0.18 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%) Frame = +2 Query: 26 RAGDWICNG--CSNNNYASRKNCKKCNLPKEE 115 RAGDW C C N N++ R C +C PK + Sbjct: 408 RAGDWKCPNPTCENMNFSWRNECNQCKAPKPD 439
>RBM5_HUMAN (P52756) RNA-binding protein 5 (RNA-binding motif protein 5)| (Putative tumor suppressor LUCA15) (G15 protein) (NY-REN-9 antigen) Length = 815 Score = 35.0 bits (79), Expect = 0.18 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +2 Query: 23 PRAGDWICNGCSNNNYASRKNCKKCNLPK 109 P+ DW+CN C NN+ R C +C K Sbjct: 180 PKFEDWLCNKCCLNNFRKRLKCFRCGADK 208
>LRP4_RAT (Q9QYP1) Low-density lipoprotein receptor-related protein 4 precursor| (Multiple epidermal growth factor-like domains 7) Length = 1905 Score = 34.3 bits (77), Expect = 0.31 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%) Frame = +2 Query: 218 GNPAMQQQLLANAN--WPYGVAARYGMQSSLWQFAGNSTNQFQGV 346 G A +Q++ ++N WP G+A YG Q W AG T +F G+ Sbjct: 888 GMDASNRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGL 932
>LRP4_MOUSE (Q8VI56) Low-density lipoprotein receptor-related protein 4 precursor| (LDLR dan) Length = 1905 Score = 34.3 bits (77), Expect = 0.31 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%) Frame = +2 Query: 218 GNPAMQQQLLANAN--WPYGVAARYGMQSSLWQFAGNSTNQFQGV 346 G A +Q++ ++N WP G+A YG Q W AG T +F G+ Sbjct: 888 GMDASSRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGL 932
>LRP4_HUMAN (O75096) Low-density lipoprotein receptor-related protein 4 precursor| (Multiple epidermal growth factor-like domains 7) Length = 1950 Score = 33.5 bits (75), Expect = 0.53 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%) Frame = +2 Query: 218 GNPAMQQQLLANAN--WPYGVAARYGMQSSLWQFAGNSTNQFQGV 346 G A +Q++ ++N WP G+A YG Q W AG T +F G+ Sbjct: 933 GMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGL 977
>VAR3_ARATH (Q8S9K3) Zinc finger protein VAR3, chloroplast precursor| (VARIEGATED 3 protein) Length = 758 Score = 33.1 bits (74), Expect = 0.69 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = +2 Query: 26 RAGDWICNGCSNNNYASRKNCKKCN 100 + GDWIC+ CS N+A C +C+ Sbjct: 276 KRGDWICSRCSGMNFARNVKCFQCD 300 Score = 31.6 bits (70), Expect = 2.0 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 4/78 (5%) Frame = +2 Query: 347 PKDWRSG-DWLC-SCGFHNYSSRAQCKECNAPVPSGMASTTMKSTGADSSS--TLGNKRL 514 PK +G +W C C F+NY C C+ P +++ S +D SS L + + Sbjct: 304 PKRQLTGSEWECPQCDFYNYGRNVACLRCDCKRP---RDSSLNSANSDYSSDPELERRLV 360 Query: 515 ASEELANDWDNKRLNPGN 568 +E+ A W +K G+ Sbjct: 361 ENEKKAQRWLSKVAQGGS 378
>HTPX_LISMF (Q721K3) Probable protease htpX homolog (EC 3.4.24.-)| Length = 304 Score = 32.0 bits (71), Expect = 1.5 Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 3/57 (5%) Frame = -3 Query: 430 ITLFTLSTR*VVMESTAAEPVTT---TPVLWNTLKLISAVAGELPKRRLHTISSSHP 269 I + +S+ VVM A+ VT+ PVLW+T++ ++ VAG +P +++ + + P Sbjct: 54 ILIMVMSSSSVVMAMNHAKEVTSKDQAPVLWDTVESMAMVAG-IPMPKVYIVEDASP 109
>RECQ4_MOUSE (Q75NR7) ATP-dependent DNA helicase Q4 (EC 3.6.1.-) (RecQ| protein-like 4) Length = 1216 Score = 31.6 bits (70), Expect = 2.0 Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 3/45 (6%) Frame = -2 Query: 221 CQSSSYSQHWQSTVPWPY---NLHTLASFLPLIIVAWLLPPWAGC 96 C + +HW +PW Y +LH L L +A PP A C Sbjct: 934 CYLELHPRHWLELLPWTYAQCHLHCLGGSAQLQALAHRCPPLAAC 978
>DOF56_ARATH (Q9FM03) Dof zinc finger protein DOF5.6 (AtDOF5.6)| Length = 372 Score = 31.2 bits (69), Expect = 2.6 Identities = 26/85 (30%), Positives = 33/85 (38%), Gaps = 14/85 (16%) Frame = +2 Query: 383 CGFHNYS---SRAQCKEC-----------NAPVPSGMASTTMKSTGADSSSTLGNKRLAS 520 C ++NYS R CK C N PV G S+ SSST K+ ++ Sbjct: 86 CYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKPSSSNSSSSTSSGKKPSN 145 Query: 521 EELANDWDNKRLNPGNANYPLSTAG 595 AN D L + NY S G Sbjct: 146 IVTANTSDLMALAHSHQNYQHSPLG 170
>RBP2_MOUSE (Q9ERU9) Ran-binding protein 2 (RanBP2)| Length = 3053 Score = 31.2 bits (69), Expect = 2.6 Identities = 32/146 (21%), Positives = 47/146 (32%), Gaps = 2/146 (1%) Frame = +2 Query: 38 WICNGCSNNNYASRKNCKKCNLPKEEAAMPQLSMGGMMPAYADYMARVQ*IANAGYKMNF 217 W CN CS N A+ K C C Sbjct: 1350 WNCNSCSFKNAATAKKCVSCQNT------------------------------------- 1372 Query: 218 GNPAMQQQLLANANWPYGVAARYGMQSSLWQFAGNSTNQFQGVPKDWRSGDWLCS-CGFH 394 NP ++LL G A + G++++ +FA + N + G W CS C Sbjct: 1373 -NPTSNKELLGPPLVENGFAPKTGLENAQDRFATMTAN---------KEGHWDCSVCLVR 1422 Query: 395 NYSSRAQCKEC-NAPVPSGMASTTMK 469 N + ++C C N S T+ K Sbjct: 1423 NEPTVSRCIACQNTKSASSFVQTSFK 1448
>HTPX_LISMO (Q8Y8E1) Probable protease htpX homolog (EC 3.4.24.-)| Length = 304 Score = 31.2 bits (69), Expect = 2.6 Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 3/57 (5%) Frame = -3 Query: 430 ITLFTLSTR*VVMESTAAEPVTT---TPVLWNTLKLISAVAGELPKRRLHTISSSHP 269 I + +S+ VVM A+ VT+ PVLW+T++ ++ VAG +P +++ + P Sbjct: 54 ILIMVMSSSSVVMAMNHAKEVTSKEQAPVLWDTVESMAMVAG-IPMPKVYIVEDPSP 109
>HTPX_LISIN (Q92D58) Probable protease htpX homolog (EC 3.4.24.-)| Length = 304 Score = 31.2 bits (69), Expect = 2.6 Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 3/57 (5%) Frame = -3 Query: 430 ITLFTLSTR*VVMESTAAEPVTT---TPVLWNTLKLISAVAGELPKRRLHTISSSHP 269 I + +S+ VVM A+ VT+ PVLW+T++ ++ VAG +P +++ + P Sbjct: 54 ILIMVMSSSSVVMAMNHAKEVTSKEQAPVLWDTVESMAMVAG-IPMPKVYIVEDPSP 109
>ACRBP_RAT (Q6AY33) Acrosin-binding protein precursor (Proacrosin-binding| protein sp32) Length = 316 Score = 30.8 bits (68), Expect = 3.4 Identities = 19/70 (27%), Positives = 34/70 (48%) Frame = +3 Query: 390 SITTHLVLSVKSVMHLSHQAWPLQP*NPQEQIVLQH*VISGWHQRSLLMTGIIKG*TQEM 569 S+TT +V + H + Q WP + N E+++ + G Q+S G+ + QE Sbjct: 146 SVTTPIVSRATATEHQAFQPWPERLNNNVEELLQSSLSLGGKEQQSSRKLGLEQQHKQEQ 205 Query: 570 LIIHFQQQAQ 599 + H ++AQ Sbjct: 206 IQEHKLEEAQ 215
>PTP3_YEAST (P40048) Tyrosine-protein phosphatase 3 (EC 3.1.3.48)| (Protein-tyrosine phosphatase 3) (PTPase 3) Length = 928 Score = 30.8 bits (68), Expect = 3.4 Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 6/99 (6%) Frame = +2 Query: 326 TNQFQ-GVPKD---WRSGDWLCSCGFHNYSSRAQCKECNAPVPSGMASTTMKSTGAD--S 487 TN F+ G+ K W+ G++ G H + K P + M TM + + S Sbjct: 632 TNDFENGIEKCYRYWQEGNYN---GIH--VKLLEKKILKMPSTTSMRKNTMGTQNSSLYS 686 Query: 488 SSTLGNKRLASEELANDWDNKRLNPGNANYPLSTAGSDN 604 + GN S + ND DN N N+N P++ A D+ Sbjct: 687 AGVQGNSSNYSTDNDNDNDNNNNNNNNSNIPVTAAACDD 725
>CBX2_MOUSE (P30658) Chromobox protein homolog 2 (Modifier 3 protein) (M33)| Length = 519 Score = 30.0 bits (66), Expect = 5.8 Identities = 21/61 (34%), Positives = 31/61 (50%) Frame = +2 Query: 401 SSRAQCKECNAPVPSGMASTTMKSTGADSSSTLGNKRLASEELANDWDNKRLNPGNANYP 580 S R++ KE +AP S KS+ + SSST + EE +D D+KR G +P Sbjct: 90 SRRSKLKEPDAPSKS-------KSSSSSSSSTSSSSSSDEEEDDSDLDSKRGPRGRETHP 142 Query: 581 L 583 + Sbjct: 143 V 143
>UL87_HCMVA (P16730) Protein UL87| Length = 941 Score = 30.0 bits (66), Expect = 5.8 Identities = 14/55 (25%), Positives = 25/55 (45%) Frame = -2 Query: 446 LMGQVHYTLYTEHEMSSYGIHSCRASHHYASPLEHLETD*CCCRRTAKETIAYHI 282 L+G V + + E+ +G H + PL ++ CC TA ++YH+ Sbjct: 91 LLGPVAVPCFCDGEVEGHGEHLVPTTQFCRGPLLYVHRRCCCGSVTAGRALSYHV 145
>CBX2_HUMAN (Q14781) Chromobox protein homolog 2| Length = 532 Score = 29.6 bits (65), Expect = 7.6 Identities = 21/61 (34%), Positives = 31/61 (50%) Frame = +2 Query: 401 SSRAQCKECNAPVPSGMASTTMKSTGADSSSTLGNKRLASEELANDWDNKRLNPGNANYP 580 S R++ KE +AP S +S++ ST + SSS EE +D D KR G +P Sbjct: 90 SRRSKLKEPDAPSKSKSSSSSSSSTSSSSSS--------DEEDDSDLDAKRGPRGRETHP 141 Query: 581 L 583 + Sbjct: 142 V 142
>TRABD_HUMAN (Q9UGI0) TRABID protein (Zinc finger Ran-binding domain-containing| protein 1) Length = 708 Score = 29.3 bits (64), Expect = 10.0 Identities = 10/28 (35%), Positives = 15/28 (53%) Frame = +2 Query: 26 RAGDWICNGCSNNNYASRKNCKKCNLPK 109 R W C+ C+ N+A K C C+ P+ Sbjct: 149 RTQHWTCSVCTYENWAKAKRCVVCDHPR 176
>THIG_CYAME (Q85G31) Thiazole biosynthesis protein thiG| Length = 258 Score = 29.3 bits (64), Expect = 10.0 Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 2/28 (7%) Frame = -2 Query: 161 HTLASFLPLIIVA--WLLPPWAGCTSCS 84 H L +F PLI WLLP AGC +CS Sbjct: 48 HALHAFTPLINWNRYWLLPNTAGCRTCS 75
>TAB3_XENLA (Q7ZXH3) Mitogen-activated protein kinase kinase kinase| 7-interacting protein 3 homolog Length = 692 Score = 29.3 bits (64), Expect = 10.0 Identities = 8/24 (33%), Positives = 15/24 (62%) Frame = +2 Query: 38 WICNGCSNNNYASRKNCKKCNLPK 109 W CN C+ N+ + C++C +P+ Sbjct: 667 WNCNSCTFLNHPALNRCEQCEMPR 690
>PK66_PLAKU (P21303) Merozoite receptor PK66 precursor (66 kDa protective minor| surface antigen) Length = 563 Score = 29.3 bits (64), Expect = 10.0 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%) Frame = +2 Query: 482 DSSSTLGNKRLASEELANDWDNK--RLNPGNANYPLSTAGS 598 D + N S+ ++NDW+NK R N GNA + L G+ Sbjct: 224 DKNENFDNLVYLSKNVSNDWENKCPRKNLGNAKFGLWVDGN 264
>AMPE_HUMAN (Q07075) Glutamyl aminopeptidase (EC 3.4.11.7) (EAP) (Aminopeptidase| A) (APA) (Differentiation antigen gp160) (CD249 antigen) Length = 957 Score = 29.3 bits (64), Expect = 10.0 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 5/61 (8%) Frame = -3 Query: 442 WDRCITLFTLSTR*VVMESTAAEPVTTTPVLWNT----LKLISAVAGELPKRR-LHTISS 278 WD + +TL+ R + T AEP T LW K A AGE P+ + L T+ + Sbjct: 875 WDYLVNRYTLNNRNLGRIVTIAEPFNTELQLWQMESFFAKYPQAGAGEKPREQVLETVKN 934 Query: 277 S 275 + Sbjct: 935 N 935 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 93,593,707 Number of Sequences: 219361 Number of extensions: 1958545 Number of successful extensions: 5807 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 5503 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5799 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5767334219 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
