| Clone Name | bags33a13 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK121641.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033055F21, full insert sequence Length = 2914 Score = 474 bits (239), Expect = e-130 Identities = 321/347 (92%), Gaps = 1/347 (0%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 |||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| || | Sbjct: 1564 gggaggatattggtggactggagaatgtcaaacgggagctgcaggagactgtccaatatc 1623 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 | ||||||||||| |||||||| ||||||||||||||||| || |||||||||||||||| Sbjct: 1624 cagtggagcatcctgagaaatttgagaagtttggcatgtctccgtccaaaggtgttctgt 1683 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 |||||||||||||||| |||||||| || |||||||||||||||||||| || ||||||| Sbjct: 1684 tctatggccctcctggctgtggtaagactttgttggccaaggcaattgctaacgagtgcc 1743 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1744 aggctaacttcattagtgtcaagggacctgagctgcttaccatgtggtttggtgagagtg 1803 Query: 252 aggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttct 311 |||| |||||||||||||| ||||||||||||||| |||||| || ||||| ||||||| Sbjct: 1804 aggccaatgtgcgtgagatttttgacaaggctaggcagtcagctccttgtgtcctcttct 1863 Query: 312 ttgatgagctttgactctattgctacccagagaggaagcagtgttgg 358 ||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 1864 ttgatgagc-ttgactcaattgctacccagagaggaagcagtgttgg 1909
>dbj|AK099712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082G14, full insert sequence Length = 2680 Score = 474 bits (239), Expect = e-130 Identities = 321/347 (92%), Gaps = 1/347 (0%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 |||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| || | Sbjct: 1564 gggaggatattggtggactggagaatgtcaaacgggagctgcaggagactgtccaatatc 1623 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 | ||||||||||| |||||||| ||||||||||||||||| || |||||||||||||||| Sbjct: 1624 cagtggagcatcctgagaaatttgagaagtttggcatgtctccgtccaaaggtgttctgt 1683 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 |||||||||||||||| |||||||| || |||||||||||||||||||| || ||||||| Sbjct: 1684 tctatggccctcctggctgtggtaagactttgttggccaaggcaattgctaacgagtgcc 1743 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1744 aggctaacttcattagtgtcaagggacctgagctgcttaccatgtggtttggtgagagtg 1803 Query: 252 aggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttct 311 |||| |||||||||||||| ||||||||||||||| |||||| || ||||| ||||||| Sbjct: 1804 aggccaatgtgcgtgagatttttgacaaggctaggcagtcagctccttgtgtcctcttct 1863 Query: 312 ttgatgagctttgactctattgctacccagagaggaagcagtgttgg 358 ||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 1864 ttgatgagc-ttgactcaattgctacccagagaggaagcagtgttgg 1909
>dbj|AK099889.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112O07, full insert sequence Length = 2685 Score = 474 bits (239), Expect = e-130 Identities = 321/347 (92%), Gaps = 1/347 (0%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 |||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| || | Sbjct: 1564 gggaggatattggtggactggagaatgtcaaacgggagctgcaggagactgtccaatatc 1623 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 | ||||||||||| |||||||| ||||||||||||||||| || |||||||||||||||| Sbjct: 1624 cagtggagcatcctgagaaatttgagaagtttggcatgtctccgtccaaaggtgttctgt 1683 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 |||||||||||||||| |||||||| || |||||||||||||||||||| || ||||||| Sbjct: 1684 tctatggccctcctggctgtggtaagactttgttggccaaggcaattgctaacgagtgcc 1743 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1744 aggctaacttcattagtgtcaagggacctgagctgcttaccatgtggtttggtgagagtg 1803 Query: 252 aggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttct 311 |||| |||||||||||||| ||||||||||||||| |||||| || ||||| ||||||| Sbjct: 1804 aggccaatgtgcgtgagatttttgacaaggctaggcagtcagctccttgtgtcctcttct 1863 Query: 312 ttgatgagctttgactctattgctacccagagaggaagcagtgttgg 358 ||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 1864 ttgatgagc-ttgactcaattgctacccagagaggaagcagtgttgg 1909
>dbj|AK098980.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093N05, full insert sequence Length = 2701 Score = 474 bits (239), Expect = e-130 Identities = 321/347 (92%), Gaps = 1/347 (0%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 |||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| || | Sbjct: 1564 gggaggatattggtggactggagaatgtcaaacgggagctgcaggagactgtccaatatc 1623 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 | ||||||||||| |||||||| ||||||||||||||||| || |||||||||||||||| Sbjct: 1624 cagtggagcatcctgagaaatttgagaagtttggcatgtctccgtccaaaggtgttctgt 1683 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 |||||||||||||||| |||||||| || |||||||||||||||||||| || ||||||| Sbjct: 1684 tctatggccctcctggctgtggtaagactttgttggccaaggcaattgctaacgagtgcc 1743 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1744 aggctaacttcattagtgtcaagggacctgagctgcttaccatgtggtttggtgagagtg 1803 Query: 252 aggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttct 311 |||| |||||||||||||| ||||||||||||||| |||||| || ||||| ||||||| Sbjct: 1804 aggccaatgtgcgtgagatttttgacaaggctaggcagtcagctccttgtgtcctcttct 1863 Query: 312 ttgatgagctttgactctattgctacccagagaggaagcagtgttgg 358 ||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 1864 ttgatgagc-ttgactcaattgctacccagagaggaagcagtgttgg 1909
>dbj|AK098874.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001D04, full insert sequence Length = 2685 Score = 474 bits (239), Expect = e-130 Identities = 321/347 (92%), Gaps = 1/347 (0%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 |||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| || | Sbjct: 1564 gggaggatattggtggactggagaatgtcaaacgggagctgcaggagactgtccaatatc 1623 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 | ||||||||||| |||||||| ||||||||||||||||| || |||||||||||||||| Sbjct: 1624 cagtggagcatcctgagaaatttgagaagtttggcatgtctccgtccaaaggtgttctgt 1683 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 |||||||||||||||| |||||||| || |||||||||||||||||||| || ||||||| Sbjct: 1684 tctatggccctcctggctgtggtaagactttgttggccaaggcaattgctaacgagtgcc 1743 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1744 aggctaacttcattagtgtcaagggacctgagctgcttaccatgtggtttggtgagagtg 1803 Query: 252 aggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttct 311 |||| |||||||||||||| ||||||||||||||| |||||| || ||||| ||||||| Sbjct: 1804 aggccaatgtgcgtgagatttttgacaaggctaggcagtcagctccttgtgtcctcttct 1863 Query: 312 ttgatgagctttgactctattgctacccagagaggaagcagtgttgg 358 ||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 1864 ttgatgagc-ttgactcaattgctacccagagaggaagcagtgttgg 1909
>dbj|AK064955.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001A05, full insert sequence Length = 2685 Score = 474 bits (239), Expect = e-130 Identities = 321/347 (92%), Gaps = 1/347 (0%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 |||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| || | Sbjct: 1564 gggaggatattggtggactggagaatgtcaaacgggagctgcaggagactgtccaatatc 1623 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 | ||||||||||| |||||||| ||||||||||||||||| || |||||||||||||||| Sbjct: 1624 cagtggagcatcctgagaaatttgagaagtttggcatgtctccgtccaaaggtgttctgt 1683 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 |||||||||||||||| |||||||| || |||||||||||||||||||| || ||||||| Sbjct: 1684 tctatggccctcctggctgtggtaagactttgttggccaaggcaattgctaacgagtgcc 1743 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1744 aggctaacttcattagtgtcaagggacctgagctgcttaccatgtggtttggtgagagtg 1803 Query: 252 aggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttct 311 |||| |||||||||||||| ||||||||||||||| |||||| || ||||| ||||||| Sbjct: 1804 aggccaatgtgcgtgagatttttgacaaggctaggcagtcagctccttgtgtcctcttct 1863 Query: 312 ttgatgagctttgactctattgctacccagagaggaagcagtgttgg 358 ||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 1864 ttgatgagc-ttgactcaattgctacccagagaggaagcagtgttgg 1909
>dbj|AK059991.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B06, full insert sequence Length = 1232 Score = 474 bits (239), Expect = e-130 Identities = 321/347 (92%), Gaps = 1/347 (0%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 |||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| || | Sbjct: 116 gggaggatattggtggactggagaatgtcaaacgggagctgcaggagactgtccaatatc 175 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 | ||||||||||| |||||||| ||||||||||||||||| || |||||||||||||||| Sbjct: 176 cagtggagcatcctgagaaatttgagaagtttggcatgtctccgtccaaaggtgttctgt 235 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 |||||||||||||||| |||||||| || |||||||||||||||||||| || ||||||| Sbjct: 236 tctatggccctcctggctgtggtaagactttgttggccaaggcaattgctaacgagtgcc 295 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 296 aggctaacttcattagtgtcaagggacctgagctgcttaccatgtggtttggtgagagtg 355 Query: 252 aggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttct 311 |||| |||||||||||||| ||||||||||||||| |||||| || ||||| ||||||| Sbjct: 356 aggccaatgtgcgtgagatttttgacaaggctaggcagtcagctccttgtgtcctcttct 415 Query: 312 ttgatgagctttgactctattgctacccagagaggaagcagtgttgg 358 ||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 416 ttgatgagc-ttgactcaattgctacccagagaggaagcagtgttgg 461
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 375 bits (189), Expect = e-101 Identities = 262/285 (91%), Gaps = 1/285 (0%) Strand = Plus / Minus Query: 57 agactgtccagtaccctgtggagcatccagagaaattcgagaagtttggcatgtcccctt 116 |||||||||| || || ||||||||||| |||||||| ||||||||||||||||| || | Sbjct: 2835453 agactgtccaatatccagtggagcatcctgagaaatttgagaagtttggcatgtctccgt 2835394 Query: 117 ccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaa 176 ||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||| Sbjct: 2835393 ccaaaggtgttctgttctatggccctcctggctgtggtaagactttgttggccaaggcaa 2835334 Query: 177 ttgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgt 236 |||| || |||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 2835333 ttgctaacgagtgccaggctaacttcattagtgtcaagggacctgagctgcttaccatgt 2835274 Query: 237 ggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggctagggggtcagcac 296 ||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||| | Sbjct: 2835273 ggtttggtgagagtgaggccaatgtgcgtgagatttttgacaaggctaggcagtcagctc 2835214 Query: 297 catgtgtactcttctttgatgagctttgactctattgctacccag 341 | ||||| |||||||||||||||| ||||||| |||||||||||| Sbjct: 2835213 cttgtgtcctcttctttgatgagc-ttgactcaattgctacccag 2835170 Score = 69.9 bits (35), Expect = 5e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggag 58 |||| ||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 2835569 gggaggatattggtggactggagaatgtcaaacgggagctgcaggag 2835523 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 cagagaggaagcagtgttgg 358 |||||||||||||||||||| Sbjct: 2835089 cagagaggaagcagtgttgg 2835070
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 375 bits (189), Expect = e-101 Identities = 262/285 (91%), Gaps = 1/285 (0%) Strand = Plus / Minus Query: 57 agactgtccagtaccctgtggagcatccagagaaattcgagaagtttggcatgtcccctt 116 |||||||||| || || ||||||||||| |||||||| ||||||||||||||||| || | Sbjct: 2835564 agactgtccaatatccagtggagcatcctgagaaatttgagaagtttggcatgtctccgt 2835505 Query: 117 ccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaa 176 ||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||| Sbjct: 2835504 ccaaaggtgttctgttctatggccctcctggctgtggtaagactttgttggccaaggcaa 2835445 Query: 177 ttgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgt 236 |||| || |||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 2835444 ttgctaacgagtgccaggctaacttcattagtgtcaagggacctgagctgcttaccatgt 2835385 Query: 237 ggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggctagggggtcagcac 296 ||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||| | Sbjct: 2835384 ggtttggtgagagtgaggccaatgtgcgtgagatttttgacaaggctaggcagtcagctc 2835325 Query: 297 catgtgtactcttctttgatgagctttgactctattgctacccag 341 | ||||| |||||||||||||||| ||||||| |||||||||||| Sbjct: 2835324 cttgtgtcctcttctttgatgagc-ttgactcaattgctacccag 2835281 Score = 69.9 bits (35), Expect = 5e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggag 58 |||| ||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 2835680 gggaggatattggtggactggagaatgtcaaacgggagctgcaggag 2835634 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 cagagaggaagcagtgttgg 358 |||||||||||||||||||| Sbjct: 2835200 cagagaggaagcagtgttgg 2835181
>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence Length = 165395 Score = 375 bits (189), Expect = e-101 Identities = 262/285 (91%), Gaps = 1/285 (0%) Strand = Plus / Minus Query: 57 agactgtccagtaccctgtggagcatccagagaaattcgagaagtttggcatgtcccctt 116 |||||||||| || || ||||||||||| |||||||| ||||||||||||||||| || | Sbjct: 107409 agactgtccaatatccagtggagcatcctgagaaatttgagaagtttggcatgtctccgt 107350 Query: 117 ccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaa 176 ||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||| Sbjct: 107349 ccaaaggtgttctgttctatggccctcctggctgtggtaagactttgttggccaaggcaa 107290 Query: 177 ttgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgt 236 |||| || |||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 107289 ttgctaacgagtgccaggctaacttcattagtgtcaagggacctgagctgcttaccatgt 107230 Query: 237 ggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggctagggggtcagcac 296 ||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||| | Sbjct: 107229 ggtttggtgagagtgaggccaatgtgcgtgagatttttgacaaggctaggcagtcagctc 107170 Query: 297 catgtgtactcttctttgatgagctttgactctattgctacccag 341 | ||||| |||||||||||||||| ||||||| |||||||||||| Sbjct: 107169 cttgtgtcctcttctttgatgagc-ttgactcaattgctacccag 107126 Score = 69.9 bits (35), Expect = 5e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggag 58 |||| ||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 107525 gggaggatattggtggactggagaatgtcaaacgggagctgcaggag 107479 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 cagagaggaagcagtgttgg 358 |||||||||||||||||||| Sbjct: 107045 cagagaggaagcagtgttgg 107026
>gb|AY108324.1| Zea mays PCO097023 mRNA sequence Length = 1794 Score = 355 bits (179), Expect = 6e-95 Identities = 306/347 (88%), Gaps = 1/347 (0%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 |||||||||||||||||||||||||||| || ||||||| ||||||||||| || || | Sbjct: 553 gggaagatattggtggtctggaaaatgttaagagggagctacaggagactgttcaatatc 612 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 | |||||||||||||| ||||| || |||||||||||||| ||||| || |||||| ||| Sbjct: 613 cagtggagcatccagataaatttgaaaagtttggcatgtctccttcgaagggtgttttgt 672 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 | |||||||||||||| ||||| || || |||||||||||||||||||| ||||| |||| Sbjct: 673 tttatggccctcctggctgtggcaagactttgttggccaaggcaattgccaatgaatgcc 732 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 | ||||||||||| ||| | ||||| ||||| |||||||||||||||||||||||||||| Sbjct: 733 aagctaacttcattagtgtgaagggtcctgaactgcttaccatgtggtttggtgagagtg 792 Query: 252 aggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttct 311 |||| ||||| |||||||| ||||||||||||||| ||| || |||||||| ||||| | Sbjct: 793 aggccaatgtccgtgagatttttgacaaggctaggcagtctgctccatgtgtcctctttt 852 Query: 312 ttgatgagctttgactctattgctacccagagaggaagcagtgttgg 358 ||||||||| | ||||| |||||||| |||||||||||||||||||| Sbjct: 853 ttgatgagc-tcgactccattgctactcagagaggaagcagtgttgg 898
>gb|AY105040.1| Zea mays PCO097024 mRNA sequence Length = 2126 Score = 317 bits (160), Expect = 1e-83 Identities = 299/344 (86%), Gaps = 1/344 (0%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 |||| ||||||||||| ||||| |||||||| ||||||| ||||||||||| || || | Sbjct: 941 gggaggatattggtgggctggagaatgtcaagagggagctccaggagactgttcaatatc 1000 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 ||||||||||||| ||||| |||||||||||||||||||| || |||||||| ||| ||| Sbjct: 1001 ctgtggagcatccggagaagttcgagaagtttggcatgtctccatccaaaggagttttgt 1060 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| |||||||| |||||||||||||||||||| ||||||||||| || ||||||| Sbjct: 1061 tctatggtcctcctggttgtggtaaaaccttgttggcaaaggcaattgccaacgagtgcc 1120 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 ||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 1121 aggctaacttcatcagtgtcaagggtcctgagttgcttaccatgtggtttggtgagagtg 1180 Query: 252 aggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttct 311 | || || || || || || ||||| |||||| | || || || ||||| ||||||| Sbjct: 1181 aagccaacgtccgcgaaatttttgataaggctcgtcaatctgctccttgtgtcctcttct 1240 Query: 312 ttgatgagctttgactctattgctacccagagaggaagcagtgt 355 ||||||||| ||||||| ||||| || ||||||||||| ||||| Sbjct: 1241 ttgatgagc-ttgactcaattgcgactcagagaggaagtagtgt 1283
>ref|NM_196705.1| Oryza sativa (japonica cultivar-group) putative endoplasmic reticulum membrane fusion protein (OSJNBa0046P18.14), mRNA Length = 2454 Score = 299 bits (151), Expect = 3e-78 Identities = 263/299 (87%), Gaps = 1/299 (0%) Strand = Plus / Plus Query: 57 agactgtccagtaccctgtggagcatccagagaaattcgagaagtttggcatgtcccctt 116 |||||||||| || || |||||||| |||||||| |||||||||||||| ||||| || | Sbjct: 1517 agactgtccaatatccagtggagcacccagagaagttcgagaagtttggaatgtctccat 1576 Query: 117 ccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaa 176 ||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 1577 ccaaaggagttctgttctatggccctcctggctgtggtaagaccttgttggccaaggcaa 1636 Query: 177 ttgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgt 236 |||| |||||||||||||| |||||||||||| | ||||| || ||| |||| ||||||| Sbjct: 1637 ttgccaatgagtgccaggcaaacttcatcagtgtgaagggcccagagttgctcaccatgt 1696 Query: 237 ggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggctagggggtcagcac 296 ||||||| |||||||| |||||||| |||||||| ||||||||||| | ||| || | Sbjct: 1697 ggtttggagagagtgaagctaatgttcgtgagatatttgacaaggcccgccagtctgcgc 1756 Query: 297 catgtgtactcttctttgatgagctttgactctattgctacccagagaggaagcagtgt 355 ||||||| |||||||| || |||| ||||||| |||||||| ||||||||||||||||| Sbjct: 1757 catgtgtgctcttcttcgacgagc-ttgactcaattgctactcagagaggaagcagtgt 1814 Score = 46.1 bits (23), Expect = 0.078 Identities = 35/39 (89%) Strand = Plus / Plus Query: 20 attggtggtctggaaaatgtcaaacgggagctgcaggag 58 |||||||| ||||| |||||||| |||||||||||||| Sbjct: 1453 attggtgggctggagaatgtcaagagggagctgcaggag 1491
>gb|BT012783.1| Lycopersicon esculentum clone 113773R, mRNA sequence Length = 2684 Score = 291 bits (147), Expect = 8e-76 Identities = 297/343 (86%), Gaps = 3/343 (0%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 ||||||| ||||| || || |||||||||||| | ||||| || |||||||| || |||| Sbjct: 1485 gggaagacattggaggccttgaaaatgtcaaaagagagcttcaagagactgttcaatacc 1544 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 | ||||||||||||||||| |||||||| ||||| ||||| ||||| ||||||||||| | Sbjct: 1545 ccgtggagcatccagagaagttcgagaaatttggtatgtcaccttcaaaaggtgttcttt 1604 Query: 132 tctatggccctcctggatgtggtaaaac-cttgttggccaaggcaattgcaaatgagtgc 190 ||||||| ||||| |||||||| ||||| ||| ||| |||||||||||||||||||||| Sbjct: 1605 tctatggtcctccgggatgtgggaaaactcttcttg-ccaaggcaattgcaaatgagtgt 1663 Query: 191 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 250 || || || ||||| ||| |||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1664 caagccaatttcattagtgtcaaaggacctgagctgcttaccatgtggtttggagagagt 1723 Query: 251 gaggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttc 310 ||||| ||||| ||||| || |||||||||||||| || ||||| ||||| |||||| Sbjct: 1724 gaggccaatgtccgtgaaatttttgacaaggctagacaatctgcaccctgtgtcctcttc 1783 Query: 311 tttgatgagctttgactctattgctacccagagaggaagcagt 353 |||||||||| ||||||||||||| || ||||| ||||||||| Sbjct: 1784 tttgatgagc-ttgactctattgccactcagaggggaagcagt 1825
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 272 bits (137), Expect = 7e-70 Identities = 246/281 (87%), Gaps = 1/281 (0%) Strand = Plus / Plus Query: 57 agactgtccagtaccctgtggagcatccagagaaattcgagaagtttggcatgtcccctt 116 |||||||||| || || |||||||| |||||||| |||||||||||||| ||||| || | Sbjct: 15400125 agactgtccaatatccagtggagcacccagagaagttcgagaagtttggaatgtctccat 15400184 Query: 117 ccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaa 176 ||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 15400185 ccaaaggagttctgttctatggccctcctggctgtggtaagaccttgttggccaaggcaa 15400244 Query: 177 ttgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgt 236 |||| |||||||||||||| |||||||||||| | ||||| || ||| |||| ||||||| Sbjct: 15400245 ttgccaatgagtgccaggcaaacttcatcagtgtgaagggcccagagttgctcaccatgt 15400304 Query: 237 ggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggctagggggtcagcac 296 ||||||| |||||||| |||||||| |||||||| ||||||||||| | ||| || | Sbjct: 15400305 ggtttggagagagtgaagctaatgttcgtgagatatttgacaaggcccgccagtctgcgc 15400364 Query: 297 catgtgtactcttctttgatgagctttgactctattgctac 337 ||||||| |||||||| || |||| ||||||| |||||||| Sbjct: 15400365 catgtgtgctcttcttcgacgagc-ttgactcaattgctac 15400404 Score = 46.1 bits (23), Expect = 0.078 Identities = 35/39 (89%) Strand = Plus / Plus Query: 20 attggtggtctggaaaatgtcaaacgggagctgcaggag 58 |||||||| ||||| |||||||| |||||||||||||| Sbjct: 15399994 attggtgggctggagaatgtcaagagggagctgcaggag 15400032
>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18, complete sequence Length = 144720 Score = 272 bits (137), Expect = 7e-70 Identities = 246/281 (87%), Gaps = 1/281 (0%) Strand = Plus / Plus Query: 57 agactgtccagtaccctgtggagcatccagagaaattcgagaagtttggcatgtcccctt 116 |||||||||| || || |||||||| |||||||| |||||||||||||| ||||| || | Sbjct: 117488 agactgtccaatatccagtggagcacccagagaagttcgagaagtttggaatgtctccat 117547 Query: 117 ccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaa 176 ||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 117548 ccaaaggagttctgttctatggccctcctggctgtggtaagaccttgttggccaaggcaa 117607 Query: 177 ttgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgt 236 |||| |||||||||||||| |||||||||||| | ||||| || ||| |||| ||||||| Sbjct: 117608 ttgccaatgagtgccaggcaaacttcatcagtgtgaagggcccagagttgctcaccatgt 117667 Query: 237 ggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggctagggggtcagcac 296 ||||||| |||||||| |||||||| |||||||| ||||||||||| | ||| || | Sbjct: 117668 ggtttggagagagtgaagctaatgttcgtgagatatttgacaaggcccgccagtctgcgc 117727 Query: 297 catgtgtactcttctttgatgagctttgactctattgctac 337 ||||||| |||||||| || |||| ||||||| |||||||| Sbjct: 117728 catgtgtgctcttcttcgacgagc-ttgactcaattgctac 117767 Score = 46.1 bits (23), Expect = 0.078 Identities = 35/39 (89%) Strand = Plus / Plus Query: 20 attggtggtctggaaaatgtcaaacgggagctgcaggag 58 |||||||| ||||| |||||||| |||||||||||||| Sbjct: 117357 attggtgggctggagaatgtcaagagggagctgcaggag 117395
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 272 bits (137), Expect = 7e-70 Identities = 246/281 (87%), Gaps = 1/281 (0%) Strand = Plus / Plus Query: 57 agactgtccagtaccctgtggagcatccagagaaattcgagaagtttggcatgtcccctt 116 |||||||||| || || |||||||| |||||||| |||||||||||||| ||||| || | Sbjct: 15408366 agactgtccaatatccagtggagcacccagagaagttcgagaagtttggaatgtctccat 15408425 Query: 117 ccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaa 176 ||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 15408426 ccaaaggagttctgttctatggccctcctggctgtggtaagaccttgttggccaaggcaa 15408485 Query: 177 ttgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgt 236 |||| |||||||||||||| |||||||||||| | ||||| || ||| |||| ||||||| Sbjct: 15408486 ttgccaatgagtgccaggcaaacttcatcagtgtgaagggcccagagttgctcaccatgt 15408545 Query: 237 ggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggctagggggtcagcac 296 ||||||| |||||||| |||||||| |||||||| ||||||||||| | ||| || | Sbjct: 15408546 ggtttggagagagtgaagctaatgttcgtgagatatttgacaaggcccgccagtctgcgc 15408605 Query: 297 catgtgtactcttctttgatgagctttgactctattgctac 337 ||||||| |||||||| || |||| ||||||| |||||||| Sbjct: 15408606 catgtgtgctcttcttcgacgagc-ttgactcaattgctac 15408645 Score = 46.1 bits (23), Expect = 0.078 Identities = 35/39 (89%) Strand = Plus / Plus Query: 20 attggtggtctggaaaatgtcaaacgggagctgcaggag 58 |||||||| ||||| |||||||| |||||||||||||| Sbjct: 15408235 attggtgggctggagaatgtcaagagggagctgcaggag 15408273
>ref|NM_120412.2| Arabidopsis thaliana ATP binding / ATPase/ hydrolase/ nucleoside-triphosphatase/ nucleotide binding AT5G03340 mRNA, complete cds Length = 2671 Score = 214 bits (108), Expect = 1e-52 Identities = 231/272 (84%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 |||| |||||||| ||||| || ||||| || | ||||| ||||||||||| || |||| Sbjct: 1531 gggaggatattggaggtctcgagaatgttaagagagagcttcaggagactgttcaatacc 1590 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 |||||||||||||||||||||||||||||||||| ||||| || || || || ||||| | Sbjct: 1591 ctgtggagcatccagagaaattcgagaagtttggtatgtctccatcaaagggagttcttt 1650 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 |||| || ||||||||||||||||||||| |||| ||||| || || ||||| ||||||| Sbjct: 1651 tctacggtcctcctggatgtggtaaaaccctgttagccaaagctatagcaaacgagtgcc 1710 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 | || |||||||||||| |||||||||| ||||| || || ||||||||||| || |||| Sbjct: 1711 aagcaaacttcatcagtgtcaagggacccgagcttctcacaatgtggtttggagaaagtg 1770 Query: 252 aggctaatgtgcgtgagatctttgacaaggct 283 | || || || || || ||||||||||||||| Sbjct: 1771 aagccaacgtccgagaaatctttgacaaggct 1802
>emb|AL162751.1|ATF12E4 Arabidopsis thaliana DNA chromosome 5, BAC clone F12E4 (ESSA project) Length = 121552 Score = 214 bits (108), Expect = 1e-52 Identities = 231/272 (84%) Strand = Plus / Minus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 |||| |||||||| ||||| || ||||| || | ||||| ||||||||||| || |||| Sbjct: 25005 gggaggatattggaggtctcgagaatgttaagagagagcttcaggagactgttcaatacc 24946 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 |||||||||||||||||||||||||||||||||| ||||| || || || || ||||| | Sbjct: 24945 ctgtggagcatccagagaaattcgagaagtttggtatgtctccatcaaagggagttcttt 24886 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 |||| || ||||||||||||||||||||| |||| ||||| || || ||||| ||||||| Sbjct: 24885 tctacggtcctcctggatgtggtaaaaccctgttagccaaagctatagcaaacgagtgcc 24826 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 | || |||||||||||| |||||||||| ||||| || || ||||||||||| || |||| Sbjct: 24825 aagcaaacttcatcagtgtcaagggacccgagcttctcacaatgtggtttggagaaagtg 24766 Query: 252 aggctaatgtgcgtgagatctttgacaaggct 283 | || || || || || ||||||||||||||| Sbjct: 24765 aagccaacgtccgagaaatctttgacaaggct 24734
>gb|BT006485.1| Arabidopsis thaliana At5g03340 gene, complete cds Length = 2433 Score = 214 bits (108), Expect = 1e-52 Identities = 231/272 (84%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 |||| |||||||| ||||| || ||||| || | ||||| ||||||||||| || |||| Sbjct: 1436 gggaggatattggaggtctcgagaatgttaagagagagcttcaggagactgttcaatacc 1495 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 |||||||||||||||||||||||||||||||||| ||||| || || || || ||||| | Sbjct: 1496 ctgtggagcatccagagaaattcgagaagtttggtatgtctccatcaaagggagttcttt 1555 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 |||| || ||||||||||||||||||||| |||| ||||| || || ||||| ||||||| Sbjct: 1556 tctacggtcctcctggatgtggtaaaaccctgttagccaaagctatagcaaacgagtgcc 1615 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 | || |||||||||||| |||||||||| ||||| || || ||||||||||| || |||| Sbjct: 1616 aagcaaacttcatcagtgtcaagggacccgagcttctcacaatgtggtttggagaaagtg 1675 Query: 252 aggctaatgtgcgtgagatctttgacaaggct 283 | || || || || || ||||||||||||||| Sbjct: 1676 aagccaacgtccgagaaatctttgacaaggct 1707
>dbj|AK118571.1| Arabidopsis thaliana At5g03340 mRNA for putative transitional endoplasmic reticulum ATPase, complete cds, clone: RAFL19-80-L03 Length = 2671 Score = 214 bits (108), Expect = 1e-52 Identities = 231/272 (84%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 |||| |||||||| ||||| || ||||| || | ||||| ||||||||||| || |||| Sbjct: 1531 gggaggatattggaggtctcgagaatgttaagagagagcttcaggagactgttcaatacc 1590 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 |||||||||||||||||||||||||||||||||| ||||| || || || || ||||| | Sbjct: 1591 ctgtggagcatccagagaaattcgagaagtttggtatgtctccatcaaagggagttcttt 1650 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 |||| || ||||||||||||||||||||| |||| ||||| || || ||||| ||||||| Sbjct: 1651 tctacggtcctcctggatgtggtaaaaccctgttagccaaagctatagcaaacgagtgcc 1710 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 | || |||||||||||| |||||||||| ||||| || || ||||||||||| || |||| Sbjct: 1711 aagcaaacttcatcagtgtcaagggacccgagcttctcacaatgtggtttggagaaagtg 1770 Query: 252 aggctaatgtgcgtgagatctttgacaaggct 283 | || || || || || ||||||||||||||| Sbjct: 1771 aagccaacgtccgagaaatctttgacaaggct 1802
>dbj|AK117125.1| Arabidopsis thaliana At5g03340 mRNA for putative transitional endoplasmic reticulum ATPase, complete cds, clone: RAFL16-66-D01 Length = 2664 Score = 214 bits (108), Expect = 1e-52 Identities = 231/272 (84%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 |||| |||||||| ||||| || ||||| || | ||||| ||||||||||| || |||| Sbjct: 1524 gggaggatattggaggtctcgagaatgttaagagagagcttcaggagactgttcaatacc 1583 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 |||||||||||||||||||||||||||||||||| ||||| || || || || ||||| | Sbjct: 1584 ctgtggagcatccagagaaattcgagaagtttggtatgtctccatcaaagggagttcttt 1643 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 |||| || ||||||||||||||||||||| |||| ||||| || || ||||| ||||||| Sbjct: 1644 tctacggtcctcctggatgtggtaaaaccctgttagccaaagctatagcaaacgagtgcc 1703 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 | || |||||||||||| |||||||||| ||||| || || ||||||||||| || |||| Sbjct: 1704 aagcaaacttcatcagtgtcaagggacccgagcttctcacaatgtggtttggagaaagtg 1763 Query: 252 aggctaatgtgcgtgagatctttgacaaggct 283 | || || || || || ||||||||||||||| Sbjct: 1764 aagccaacgtccgagaaatctttgacaaggct 1795
>gb|DQ359725.1| Glycine max plamsma membrane-associated AAA-ATPase mRNA, complete cds Length = 2628 Score = 208 bits (105), Expect = 9e-51 Identities = 289/349 (82%), Gaps = 1/349 (0%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 ||||||| ||||| || || ||||||||||| || || ||||| |||||||| || || | Sbjct: 1487 gggaagacattggaggccttgaaaatgtcaagcgtgaactgcaagagactgtacaatatc 1546 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 | || ||||| ||||| || || ||||||||||| ||||| || || ||||| || || | Sbjct: 1547 cagttgagcacccagaaaagtttgagaagtttggtatgtctccatctaaaggagtacttt 1606 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| ||||| |||||||| ||||| ||||| ||||| |||||||| ||||| || | Sbjct: 1607 tctatggtcctccaggatgtgggaaaactttgttagccaaagcaattgctaatgaatgtc 1666 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 | ||||||||||||||| | || || || || ||||||| |||||||||||||| |||| Sbjct: 1667 aagctaacttcatcagtgtgaaaggtccagaattgcttacaatgtggtttggtgaaagtg 1726 Query: 252 aggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttct 311 | |||||||| | || || ||||||||||| || || || |||||||| ||||||| Sbjct: 1727 aagctaatgttagagaaatttttgacaaggccagacaatcggctccatgtgtcctcttct 1786 Query: 312 ttgatgagctttgactctattgctacccagagaggaagcagtgttgggg 360 ||||||||| ||||||||||||| || |||||||||||||||||||||| Sbjct: 1787 ttgatgagc-ttgactctattgccactcagagaggaagcagtgttgggg 1834
>gb|U20213.1|GMU20213 Glycine max valosin-containing protein mRNA, complete cds Length = 2654 Score = 208 bits (105), Expect = 9e-51 Identities = 289/349 (82%), Gaps = 1/349 (0%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 ||||||| ||||| || || ||||||||||| || || ||||| |||||||| || || | Sbjct: 1507 gggaagacattggaggccttgaaaatgtcaagcgtgaactgcaagagactgtacaatatc 1566 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 | || ||||| ||||| || || ||||||||||| ||||| || || ||||| || || | Sbjct: 1567 cagttgagcacccagaaaagtttgagaagtttggtatgtctccatctaaaggagtacttt 1626 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| ||||| |||||||| ||||| ||||| ||||| |||||||| ||||| || | Sbjct: 1627 tctatggtcctccaggatgtgggaaaactttgttagccaaagcaattgctaatgaatgtc 1686 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 | ||||||||||||||| | || || || || ||||||| |||||||||||||| |||| Sbjct: 1687 aagctaacttcatcagtgtgaaaggtccagaattgcttacaatgtggtttggtgaaagtg 1746 Query: 252 aggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttct 311 | |||||||| | || || ||||||||||| || || || |||||||| ||||||| Sbjct: 1747 aagctaatgttagagaaatttttgacaaggccagacaatcggctccatgtgtcctcttct 1806 Query: 312 ttgatgagctttgactctattgctacccagagaggaagcagtgttgggg 360 ||||||||| ||||||||||||| || |||||||||||||||||||||| Sbjct: 1807 ttgatgagc-ttgactctattgccactcagagaggaagcagtgttgggg 1854
>gb|BC007562.1| Homo sapiens valosin-containing protein, mRNA (cDNA clone IMAGE:2988964), partial cds Length = 2537 Score = 204 bits (103), Expect = 1e-49 Identities = 211/247 (85%) Strand = Plus / Plus Query: 36 atgtcaaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcg 95 |||||||||| ||||| |||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 966 atgtcaaacgtgagctacaggagctggtccagtatcctgtggagcacccagacaaattcc 1025 Query: 96 agaagtttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggta 155 ||||||||||||| | |||||||| || |||||||||||||| |||||||| ||||| | Sbjct: 1026 tgaagtttggcatgacaccttccaagggagttctgttctatggacctcctggctgtggga 1085 Query: 156 aaaccttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagg 215 |||| ||||||||||| || ||||| ||||| |||||||| ||||||||| ||||||| Sbjct: 1086 aaactttgttggccaaagccattgctaatgaatgccaggccaacttcatctccatcaagg 1145 Query: 216 gacctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttg 275 | ||||||||||| |||||||||||||| ||| |||||| ||||| | || ||||||| Sbjct: 1146 gtcctgagctgctcaccatgtggtttggggagtctgaggccaatgtcagagaaatctttg 1205 Query: 276 acaaggc 282 ||||||| Sbjct: 1206 acaaggc 1212
>gb|BC023563.1| Homo sapiens valosin-containing protein, mRNA (cDNA clone IMAGE:4422977), **** WARNING: chimeric clone **** Length = 5159 Score = 204 bits (103), Expect = 1e-49 Identities = 211/247 (85%) Strand = Plus / Plus Query: 36 atgtcaaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcg 95 |||||||||| ||||| |||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 3584 atgtcaaacgtgagctacaggagctggtccagtatcctgtggagcacccagacaaattcc 3643 Query: 96 agaagtttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggta 155 ||||||||||||| | |||||||| || |||||||||||||| |||||||| ||||| | Sbjct: 3644 tgaagtttggcatgacaccttccaagggagttctgttctatggacctcctggctgtggga 3703 Query: 156 aaaccttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagg 215 |||| ||||||||||| || ||||| ||||| |||||||| ||||||||| ||||||| Sbjct: 3704 aaactttgttggccaaagccattgctaatgaatgccaggccaacttcatctccatcaagg 3763 Query: 216 gacctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttg 275 | ||||||||||| |||||||||||||| ||| |||||| ||||| | || ||||||| Sbjct: 3764 gtcctgagctgctcaccatgtggtttggggagtctgaggccaatgtcagagaaatctttg 3823 Query: 276 acaaggc 282 ||||||| Sbjct: 3824 acaaggc 3830
>gb|BC021055.1| Homo sapiens cDNA clone IMAGE:2822943, **** WARNING: chimeric clone **** Length = 4821 Score = 204 bits (103), Expect = 1e-49 Identities = 211/247 (85%) Strand = Plus / Plus Query: 36 atgtcaaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcg 95 |||||||||| ||||| |||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 1747 atgtcaaacgtgagctacaggagctggtccagtatcctgtggagcacccagacaaattcc 1806 Query: 96 agaagtttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggta 155 ||||||||||||| | |||||||| || |||||||||||||| |||||||| ||||| | Sbjct: 1807 tgaagtttggcatgacaccttccaagggagttctgttctatggacctcctggctgtggga 1866 Query: 156 aaaccttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagg 215 |||| ||||||||||| || ||||| ||||| |||||||| ||||||||| ||||||| Sbjct: 1867 aaactttgttggccaaagccattgctaatgaatgccaggccaacttcatctccatcaagg 1926 Query: 216 gacctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttg 275 | ||||||||||| |||||||||||||| ||| |||||| ||||| | || ||||||| Sbjct: 1927 gtcctgagctgctcaccatgtggtttggggagtctgaggccaatgtcagagaaatctttg 1986 Query: 276 acaaggc 282 ||||||| Sbjct: 1987 acaaggc 1993
>ref|NM_007126.2| Homo sapiens valosin-containing protein (VCP), mRNA Length = 3198 Score = 204 bits (103), Expect = 1e-49 Identities = 211/247 (85%) Strand = Plus / Plus Query: 36 atgtcaaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcg 95 |||||||||| ||||| |||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 1663 atgtcaaacgtgagctacaggagctggtccagtatcctgtggagcacccagacaaattcc 1722 Query: 96 agaagtttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggta 155 ||||||||||||| | |||||||| || |||||||||||||| |||||||| ||||| | Sbjct: 1723 tgaagtttggcatgacaccttccaagggagttctgttctatggacctcctggctgtggga 1782 Query: 156 aaaccttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagg 215 |||| ||||||||||| || ||||| ||||| |||||||| ||||||||| ||||||| Sbjct: 1783 aaactttgttggccaaagccattgctaatgaatgccaggccaacttcatctccatcaagg 1842 Query: 216 gacctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttg 275 | ||||||||||| |||||||||||||| ||| |||||| ||||| | || ||||||| Sbjct: 1843 gtcctgagctgctcaccatgtggtttggggagtctgaggccaatgtcagagaaatctttg 1902 Query: 276 acaaggc 282 ||||||| Sbjct: 1903 acaaggc 1909
>gb|BC096751.1| Homo sapiens cDNA clone IMAGE:5296598, containing frame-shift errors Length = 2894 Score = 204 bits (103), Expect = 1e-49 Identities = 211/247 (85%) Strand = Plus / Plus Query: 36 atgtcaaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcg 95 |||||||||| ||||| |||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 1699 atgtcaaacgtgagctacaggagctggtccagtatcctgtggagcacccagacaaattcc 1758 Query: 96 agaagtttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggta 155 ||||||||||||| | |||||||| || |||||||||||||| |||||||| ||||| | Sbjct: 1759 tgaagtttggcatgacaccttccaagggagttctgttctatggacctcctggctgtggga 1818 Query: 156 aaaccttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagg 215 |||| ||||||||||| || ||||| ||||| |||||||| ||||||||| ||||||| Sbjct: 1819 aaactttgttggccaaagccattgctaatgaatgccaggccaacttcatctccatcaagg 1878 Query: 216 gacctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttg 275 | ||||||||||| |||||||||||||| ||| |||||| ||||| | || ||||||| Sbjct: 1879 gtcctgagctgctcaccatgtggtttggggagtctgaggccaatgtcagagaaatctttg 1938 Query: 276 acaaggc 282 ||||||| Sbjct: 1939 acaaggc 1945
>emb|AL137377.1|HSM802065 Homo sapiens mRNA; cDNA DKFZp434K0126 (from clone DKFZp434K0126) Length = 1862 Score = 204 bits (103), Expect = 1e-49 Identities = 211/247 (85%) Strand = Plus / Plus Query: 36 atgtcaaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcg 95 |||||||||| ||||| |||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 326 atgtcaaacgtgagctacaggagctggtccagtatcctgtggagcacccagacaaattcc 385 Query: 96 agaagtttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggta 155 ||||||||||||| | |||||||| || |||||||||||||| |||||||| ||||| | Sbjct: 386 tgaagtttggcatgacaccttccaagggagttctgttctatggacctcctggctgtggga 445 Query: 156 aaaccttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagg 215 |||| ||||||||||| || ||||| ||||| |||||||| ||||||||| ||||||| Sbjct: 446 aaactttgttggccaaagccattgctaatgaatgccaggccaacttcatctccatcaagg 505 Query: 216 gacctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttg 275 | ||||||||||| |||||||||||||| ||| |||||| ||||| | || ||||||| Sbjct: 506 gtcctgagctgctcaccatgtggtttggggagtctgaggccaatgtcagagaaatctttg 565 Query: 276 acaaggc 282 ||||||| Sbjct: 566 acaaggc 572
>emb|CR606334.1| full-length cDNA clone CS0DM007YL14 of Fetal liver of Homo sapiens (human) Length = 2858 Score = 204 bits (103), Expect = 1e-49 Identities = 211/247 (85%) Strand = Plus / Plus Query: 36 atgtcaaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcg 95 |||||||||| ||||| |||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 1690 atgtcaaacgtgagctacaggagctggtccagtatcctgtggagcacccagacaaattcc 1749 Query: 96 agaagtttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggta 155 ||||||||||||| | |||||||| || |||||||||||||| |||||||| ||||| | Sbjct: 1750 tgaagtttggcatgacaccttccaagggagttctgttctatggacctcctggctgtggga 1809 Query: 156 aaaccttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagg 215 |||| ||||||||||| || ||||| ||||| |||||||| ||||||||| ||||||| Sbjct: 1810 aaactttgttggccaaagccattgctaatgaatgccaggccaacttcatctccatcaagg 1869 Query: 216 gacctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttg 275 | ||||||||||| |||||||||||||| ||| |||||| ||||| | || ||||||| Sbjct: 1870 gtcctgagctgctcaccatgtggtttggggagtctgaggccaatgtcagagaaatctttg 1929 Query: 276 acaaggc 282 ||||||| Sbjct: 1930 acaaggc 1936
>gb|AF313486.1|AF313485S2 Homo sapiens tissue-type kidney valosin-containing protein mRNA, partial cds Length = 1303 Score = 204 bits (103), Expect = 1e-49 Identities = 211/247 (85%) Strand = Plus / Plus Query: 36 atgtcaaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcg 95 |||||||||| ||||| |||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 337 atgtcaaacgtgagctacaggagctggtccagtatcctgtggagcacccagacaaattcc 396 Query: 96 agaagtttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggta 155 ||||||||||||| | |||||||| || |||||||||||||| |||||||| ||||| | Sbjct: 397 tgaagtttggcatgacaccttccaagggagttctgttctatggacctcctggctgtggga 456 Query: 156 aaaccttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagg 215 |||| ||||||||||| || ||||| ||||| |||||||| ||||||||| ||||||| Sbjct: 457 aaactttgttggccaaagccattgctaatgaatgccaggccaacttcatctccatcaagg 516 Query: 216 gacctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttg 275 | ||||||||||| |||||||||||||| ||| |||||| ||||| | || ||||||| Sbjct: 517 gtcctgagctgctcaccatgtggtttggggagtctgaggccaatgtcagagaaatctttg 576 Query: 276 acaaggc 282 ||||||| Sbjct: 577 acaaggc 583
>gb|AF100752.1|AF100752 Homo sapiens transitional endoplasmic reticulum ATPase mRNA, complete cds Length = 2887 Score = 204 bits (103), Expect = 1e-49 Identities = 211/247 (85%) Strand = Plus / Plus Query: 36 atgtcaaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcg 95 |||||||||| ||||| |||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 1663 atgtcaaacgtgagctacaggagctggtccagtatcctgtggagcacccagacaaattcc 1722 Query: 96 agaagtttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggta 155 ||||||||||||| | |||||||| || |||||||||||||| |||||||| ||||| | Sbjct: 1723 tgaagtttggcatgacaccttccaagggagttctgttctatggacctcctggctgtggga 1782 Query: 156 aaaccttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagg 215 |||| ||||||||||| || ||||| ||||| |||||||| ||||||||| ||||||| Sbjct: 1783 aaactttgttggccaaagccattgctaatgaatgccaggccaacttcatctccatcaagg 1842 Query: 216 gacctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttg 275 | ||||||||||| |||||||||||||| ||| |||||| ||||| | || ||||||| Sbjct: 1843 gtcctgagctgctcaccatgtggtttggggagtctgaggccaatgtcagagaaatctttg 1902 Query: 276 acaaggc 282 ||||||| Sbjct: 1903 acaaggc 1909
>gb|BC110913.1| Homo sapiens valosin-containing protein, mRNA (cDNA clone MGC:131997 IMAGE:6502535), complete cds Length = 3212 Score = 204 bits (103), Expect = 1e-49 Identities = 211/247 (85%) Strand = Plus / Plus Query: 36 atgtcaaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcg 95 |||||||||| ||||| |||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 1650 atgtcaaacgtgagctacaggagctggtccagtatcctgtggagcacccagacaaattcc 1709 Query: 96 agaagtttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggta 155 ||||||||||||| | |||||||| || |||||||||||||| |||||||| ||||| | Sbjct: 1710 tgaagtttggcatgacaccttccaagggagttctgttctatggacctcctggctgtggga 1769 Query: 156 aaaccttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagg 215 |||| ||||||||||| || ||||| ||||| |||||||| ||||||||| ||||||| Sbjct: 1770 aaactttgttggccaaagccattgctaatgaatgccaggccaacttcatctccatcaagg 1829 Query: 216 gacctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttg 275 | ||||||||||| |||||||||||||| ||| |||||| ||||| | || ||||||| Sbjct: 1830 gtcctgagctgctcaccatgtggtttggggagtctgaggccaatgtcagagaaatctttg 1889 Query: 276 acaaggc 282 ||||||| Sbjct: 1890 acaaggc 1896
>gb|BC060518.1| Rattus norvegicus valosin-containing protein, mRNA (cDNA clone MGC:72335 IMAGE:5597843), complete cds Length = 3214 Score = 198 bits (100), Expect = 9e-48 Identities = 199/232 (85%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 ||||||| ||||| || ||||| |||||||||||||||| |||||| || ||||| | Sbjct: 1638 gggaagacattggaggcctggaggatgtcaaacgggagcttcaggagttggttcagtatc 1697 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 |||||||||||||||| |||||| || ||||||||| | ||||||||||||||||| | Sbjct: 1698 ctgtggagcatccagacaaattcctcaaatttggcatgactccttccaaaggtgttcttt 1757 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| || ||||| ||||| |||||||| ||||||| || ||||| ||||| |||| Sbjct: 1758 tctatggaccgcctggctgtgggaaaaccttactggccaaagccattgctaatgaatgcc 1817 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 243 |||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1818 aggctaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 1869
>gb|U11760.1|RNU11760 Rattus norvegicus transitional endoplasmic reticulum ATPase mRNA, complete cds Length = 2870 Score = 198 bits (100), Expect = 9e-48 Identities = 199/232 (85%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 ||||||| ||||| || ||||| |||||||||||||||| |||||| || ||||| | Sbjct: 1670 gggaagacattggaggcctggaggatgtcaaacgggagcttcaggagttggttcagtatc 1729 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 |||||||||||||||| |||||| || ||||||||| | ||||||||||||||||| | Sbjct: 1730 ctgtggagcatccagacaaattcctcaaatttggcatgactccttccaaaggtgttcttt 1789 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| || ||||| ||||| |||||||| ||||||| || ||||| ||||| |||| Sbjct: 1790 tctatggaccgcctggctgtgggaaaaccttactggccaaagccattgctaatgaatgcc 1849 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 243 |||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1850 aggctaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 1901
>ref|NM_053864.2| Rattus norvegicus valosin-containing protein (Vcp), mRNA Length = 3214 Score = 198 bits (100), Expect = 9e-48 Identities = 199/232 (85%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 ||||||| ||||| || ||||| |||||||||||||||| |||||| || ||||| | Sbjct: 1638 gggaagacattggaggcctggaggatgtcaaacgggagcttcaggagttggttcagtatc 1697 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 |||||||||||||||| |||||| || ||||||||| | ||||||||||||||||| | Sbjct: 1698 ctgtggagcatccagacaaattcctcaaatttggcatgactccttccaaaggtgttcttt 1757 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| || ||||| ||||| |||||||| ||||||| || ||||| ||||| |||| Sbjct: 1758 tctatggaccgcctggctgtgggaaaaccttactggccaaagccattgctaatgaatgcc 1817 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 243 |||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1818 aggctaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 1869
>emb|Y09396.1|CACAFP C.annuum mRNA for CDC48p-like protein Length = 2682 Score = 192 bits (97), Expect = 5e-46 Identities = 281/341 (82%), Gaps = 1/341 (0%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 ||||||| ||||| || || |||||||||||||| ||||| || |||||||| || || | Sbjct: 1475 gggaagacattggaggccttgaaaatgtcaaacgagagcttcaagagactgttcaatatc 1534 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 | ||||| | |||||||| || ||||||||||| ||||| ||||| |||||||| || | Sbjct: 1535 cagtggaacccccagagaagtttgagaagtttggtatgtcaccttcgaaaggtgtacttt 1594 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| || || |||||||| ||||| | | |||||||||||||||||||| || | Sbjct: 1595 tctatggtcccccaggatgtgggaaaactctacttgccaaggcaattgcaaatgaatgtc 1654 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 | || || ||||||||| |||| |||||||| ||||| |||||||||||||| ||||||| Sbjct: 1655 aagccaatttcatcagtgtcaaaggacctgaactgctcaccatgtggtttggagagagtg 1714 Query: 252 aggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttct 311 |||| ||||| ||||| || || || || || || || || || || || ||||||| Sbjct: 1715 aggcgaatgttcgtgaaattttcgataaagcgagacaatccgctccctgcgtcctcttct 1774 Query: 312 ttgatgagctttgactctattgctacccagagaggaagcag 352 ||||||||| | |||||||||||||| |||||||||||||| Sbjct: 1775 ttgatgagc-tcgactctattgctactcagagaggaagcag 1814
>gb|BT014585.1| Lycopersicon esculentum clone 134043F, mRNA sequence Length = 2708 Score = 186 bits (94), Expect = 3e-44 Identities = 278/338 (82%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 15 aagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtaccctg 74 |||| ||||| || || |||||||| || || ||||| || |||||||| || || || | Sbjct: 1513 aagacattggaggccttgaaaatgttaagcgagagcttcaagagactgttcaatatccag 1572 Query: 75 tggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgttct 134 |||| || |||||||| || ||||||||||| ||||| ||||| |||||||| || |||| Sbjct: 1573 tggaacacccagagaagtttgagaagtttggtatgtcaccttcgaaaggtgtacttttct 1632 Query: 135 atggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgccagg 194 |||| || || |||||||| |||||| | | |||||||||||||||||||| || || | Sbjct: 1633 atggtcccccaggatgtgggaaaaccctacttgccaaggcaattgcaaatgaatgtcaag 1692 Query: 195 ctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtgagg 254 |||| || |||||| |||| |||||||| ||||| |||||||||||||| |||||||||| Sbjct: 1693 ctaattttatcagtgtcaaaggacctgaactgctcaccatgtggtttggagagagtgagg 1752 Query: 255 ctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttctttg 314 | ||||| ||||| || || || || || || || ||||| || || |||||||||| Sbjct: 1753 cgaatgttcgtgaaattttcgataaagccagacaatctgcaccttgcgtcctcttctttg 1812 Query: 315 atgagctttgactctattgctacccagagaggaagcag 352 |||||| |||||||||||||||| ||||| || ||||| Sbjct: 1813 atgagc-ttgactctattgctactcagaggggcagcag 1849
>emb|Z14044.1|MMVALPRO M.musculus mRNA for valosin-containing protein Length = 3143 Score = 182 bits (92), Expect = 5e-43 Identities = 254/308 (82%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 ||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||||| Sbjct: 1588 gggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtacc 1647 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 | ||||| |||||||| |||||| || ||||||||| | || |||||||||||||| | Sbjct: 1648 ccgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggtgttcttt 1707 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| |||| Sbjct: 1708 tctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgcc 1767 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| ||||||||| |||||||| |||||||||||||||||||||||||| || || Sbjct: 1768 aggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatctg 1827 Query: 252 aggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttct 311 |||| ||||| || || || ||||||||||| || | || || ||||||||||||| Sbjct: 1828 aggccaatgtccgggaaatttttgacaaggcacggcaagctgccccctgtgtactcttct 1887 Query: 312 ttgatgag 319 |||||||| Sbjct: 1888 ttgatgag 1895
>emb|AL353795.13| Human DNA sequence from clone RP11-182N22 on chromosome 9 Contains a novel gene, the VCP gene for valosin-containing protein, the FANCG gene for Fanconi anemia, complementation group G (FAG, XRCC9), the gene for phosphatidylinositol glycan class O (PIGO), a novel gene, the STOML2 gene for stomatin (EPB72)-like 2 (SLP-2), a novel gene (KIAA1539) (FLJ11560), a zinc finger protein pseudogene, the 5' end of the UNC13 gene for unc-13-like (C. elegans) (hmunc13) and nine CpG islands, complete sequence Length = 195102 Score = 182 bits (92), Expect = 5e-43 Identities = 185/216 (85%) Strand = Plus / Minus Query: 66 agtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtg 125 |||| ||||||||||| ||||| |||||| ||||||||||||| | |||||||| || | Sbjct: 30244 agtatcctgtggagcacccagacaaattcctgaagtttggcatgacaccttccaagggag 30185 Query: 126 ttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatg 185 ||||||||||||| |||||||| ||||| ||||| ||||||||||| || ||||| |||| Sbjct: 30184 ttctgttctatggacctcctggctgtgggaaaactttgttggccaaagccattgctaatg 30125 Query: 186 agtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtg 245 | |||||||| ||||||||| |||||||| ||||||||||| |||||||||||||| | Sbjct: 30124 aatgccaggccaacttcatctccatcaagggtcctgagctgctcaccatgtggtttgggg 30065 Query: 246 agagtgaggctaatgtgcgtgagatctttgacaagg 281 || |||||| ||||| | || ||||||||||||| Sbjct: 30064 agtctgaggccaatgtcagagaaatctttgacaagg 30029
>gb|AC004472.1|AC004472 Homo sapiens chromosome 9, P1 clone 11659, complete sequence Length = 86765 Score = 182 bits (92), Expect = 5e-43 Identities = 185/216 (85%) Strand = Plus / Minus Query: 66 agtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtg 125 |||| ||||||||||| ||||| |||||| ||||||||||||| | |||||||| || | Sbjct: 40432 agtatcctgtggagcacccagacaaattcctgaagtttggcatgacaccttccaagggag 40373 Query: 126 ttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatg 185 ||||||||||||| |||||||| ||||| ||||| ||||||||||| || ||||| |||| Sbjct: 40372 ttctgttctatggacctcctggctgtgggaaaactttgttggccaaagccattgctaatg 40313 Query: 186 agtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtg 245 | |||||||| ||||||||| |||||||| ||||||||||| |||||||||||||| | Sbjct: 40312 aatgccaggccaacttcatctccatcaagggtcctgagctgctcaccatgtggtttgggg 40253 Query: 246 agagtgaggctaatgtgcgtgagatctttgacaagg 281 || |||||| ||||| | || ||||||||||||| Sbjct: 40252 agtctgaggccaatgtcagagaaatctttgacaagg 40217
>ref|NM_115183.2| Arabidopsis thaliana ATP binding / hydrolase/ nucleoside-triphosphatase/ nucleotide binding AT3G53230 mRNA, complete cds Length = 2672 Score = 180 bits (91), Expect = 2e-42 Identities = 220/263 (83%) Strand = Plus / Plus Query: 20 attggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtaccctgtggag 79 ||||||||||| || |||||||| ||||||| || |||||||| || || || |||||| Sbjct: 1488 attggtggtcttgagaatgtcaagagggagctccaagagactgttcaatatccagtggag 1547 Query: 80 catccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgttctatggc 139 ||||| |||||||||||||||||||| ||||| || || ||||| || || ||||||||| Sbjct: 1548 catcctgagaaattcgagaagtttgggatgtcaccgtctaaaggagtcctattctatggc 1607 Query: 140 cctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgccaggctaac 199 || ||||| ||||| || ||| | ||||| ||||| ||||| || ||||| || || ||| Sbjct: 1608 ccccctggttgtggaaagaccctcttggctaaggctattgcgaacgagtgtcaagccaac 1667 Query: 200 ttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtgaggctaat 259 ||||| ||||||||||| |||||||| || || ||||||||||| |||||||| || ||| Sbjct: 1668 ttcattagtatcaagggtcctgagctcctcacaatgtggtttggagagagtgaagccaat 1727 Query: 260 gtgcgtgagatctttgacaaggc 282 ||| | ||||| || |||||||| Sbjct: 1728 gtgagagagatattcgacaaggc 1750
>ref|NM_001034294.1| Bos taurus similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) (MGC128142), mRNA Length = 3258 Score = 180 bits (91), Expect = 2e-42 Identities = 208/247 (84%) Strand = Plus / Plus Query: 36 atgtcaaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcg 95 |||||||||| ||||| |||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 1712 atgtcaaacgtgagcttcaggagctggtccagtatcctgtggagcacccagacaaattcc 1771 Query: 96 agaagtttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggta 155 |||||||||||| | || ||||| || || ||||||||||| |||||||| ||||| | Sbjct: 1772 tcaagtttggcatgacaccctccaagggagtactgttctatggacctcctggctgtggga 1831 Query: 156 aaaccttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagg 215 |||||||| ||||||| || ||||| |||||||||||||| ||||||||| ||||||| Sbjct: 1832 aaaccttgctggccaaagccattgctaatgagtgccaggccaacttcatctccatcaagg 1891 Query: 216 gacctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttg 275 | ||||||||||| |||||||||||||| ||| |||||| || ||| | || ||||| | Sbjct: 1892 gtcctgagctgctcaccatgtggtttggagagtctgaggccaacgtgagggaaatcttcg 1951 Query: 276 acaaggc 282 ||||||| Sbjct: 1952 acaaggc 1958
>ref|XM_985571.1| PREDICTED: Mus musculus similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 1 (LOC675857), mRNA Length = 3257 Score = 180 bits (91), Expect = 2e-42 Identities = 226/271 (83%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 ||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||||| Sbjct: 1700 gggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtacc 1759 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 | ||||| |||||||| |||||| || ||||||||| | || |||||||||||||| | Sbjct: 1760 ccgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggtgttcttt 1819 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| |||| Sbjct: 1820 tctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgcc 1879 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| ||||||||| |||||||| |||||||||||||||||||||||||| || || Sbjct: 1880 aggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatctg 1939 Query: 252 aggctaatgtgcgtgagatctttgacaaggc 282 |||| ||||| || || || ||||||||||| Sbjct: 1940 aggccaatgtccgggaaatttttgacaaggc 1970 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gtgtactcttctttgatgag 319 |||||||||||||||||||| Sbjct: 1973 gtgtactcttctttgatgag 1992
>ref|XM_861110.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 13 (LOC481590), mRNA Length = 3371 Score = 180 bits (91), Expect = 2e-42 Identities = 226/271 (83%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 |||| |||||||| || ||||| |||||||||| ||||| |||||| |||||||| | Sbjct: 1695 gggaggatattgggggcctggaggatgtcaaacgtgagcttcaggagctggtccagtatc 1754 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 |||||||||| ||||| |||||| |||||||||||| | || |||||||| || || | Sbjct: 1755 ctgtggagcacccagacaaattcctcaagtttggcatgacaccctccaaaggagtactct 1814 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| || ||||| ||||| ||||||||| ||||||| || ||||| ||||| |||| Sbjct: 1815 tctatggaccccctggctgtgggaaaaccttgctggccaaagccattgctaatgaatgcc 1874 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| ||||||||| ||||||||| ||||||||||| |||||||||||||| ||| || Sbjct: 1875 aggccaacttcatctctatcaagggtcctgagctgctcaccatgtggtttggggagtctg 1934 Query: 252 aggctaatgtgcgtgagatctttgacaaggc 282 | || ||||| | || |||||||||||||| Sbjct: 1935 aagccaatgtcagggaaatctttgacaaggc 1965
>ref|XM_861098.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 12 (LOC481590), mRNA Length = 3398 Score = 180 bits (91), Expect = 2e-42 Identities = 226/271 (83%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 |||| |||||||| || ||||| |||||||||| ||||| |||||| |||||||| | Sbjct: 1695 gggaggatattgggggcctggaggatgtcaaacgtgagcttcaggagctggtccagtatc 1754 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 |||||||||| ||||| |||||| |||||||||||| | || |||||||| || || | Sbjct: 1755 ctgtggagcacccagacaaattcctcaagtttggcatgacaccctccaaaggagtactct 1814 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| || ||||| ||||| ||||||||| ||||||| || ||||| ||||| |||| Sbjct: 1815 tctatggaccccctggctgtgggaaaaccttgctggccaaagccattgctaatgaatgcc 1874 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| ||||||||| ||||||||| ||||||||||| |||||||||||||| ||| || Sbjct: 1875 aggccaacttcatctctatcaagggtcctgagctgctcaccatgtggtttggggagtctg 1934 Query: 252 aggctaatgtgcgtgagatctttgacaaggc 282 | || ||||| | || |||||||||||||| Sbjct: 1935 aagccaatgtcagggaaatctttgacaaggc 1965
>ref|XM_538712.2| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 1 (LOC481590), mRNA Length = 3377 Score = 180 bits (91), Expect = 2e-42 Identities = 226/271 (83%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 |||| |||||||| || ||||| |||||||||| ||||| |||||| |||||||| | Sbjct: 1695 gggaggatattgggggcctggaggatgtcaaacgtgagcttcaggagctggtccagtatc 1754 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 |||||||||| ||||| |||||| |||||||||||| | || |||||||| || || | Sbjct: 1755 ctgtggagcacccagacaaattcctcaagtttggcatgacaccctccaaaggagtactct 1814 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| || ||||| ||||| ||||||||| ||||||| || ||||| ||||| |||| Sbjct: 1815 tctatggaccccctggctgtgggaaaaccttgctggccaaagccattgctaatgaatgcc 1874 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| ||||||||| ||||||||| ||||||||||| |||||||||||||| ||| || Sbjct: 1875 aggccaacttcatctctatcaagggtcctgagctgctcaccatgtggtttggggagtctg 1934 Query: 252 aggctaatgtgcgtgagatctttgacaaggc 282 | || ||||| | || |||||||||||||| Sbjct: 1935 aagccaatgtcagggaaatctttgacaaggc 1965
>ref|XM_861074.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 11 (LOC481590), mRNA Length = 2599 Score = 180 bits (91), Expect = 2e-42 Identities = 226/271 (83%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 |||| |||||||| || ||||| |||||||||| ||||| |||||| |||||||| | Sbjct: 1695 gggaggatattgggggcctggaggatgtcaaacgtgagcttcaggagctggtccagtatc 1754 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 |||||||||| ||||| |||||| |||||||||||| | || |||||||| || || | Sbjct: 1755 ctgtggagcacccagacaaattcctcaagtttggcatgacaccctccaaaggagtactct 1814 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| || ||||| ||||| ||||||||| ||||||| || ||||| ||||| |||| Sbjct: 1815 tctatggaccccctggctgtgggaaaaccttgctggccaaagccattgctaatgaatgcc 1874 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| ||||||||| ||||||||| ||||||||||| |||||||||||||| ||| || Sbjct: 1875 aggccaacttcatctctatcaagggtcctgagctgctcaccatgtggtttggggagtctg 1934 Query: 252 aggctaatgtgcgtgagatctttgacaaggc 282 | || ||||| | || |||||||||||||| Sbjct: 1935 aagccaatgtcagggaaatctttgacaaggc 1965
>ref|XM_861059.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 10 (LOC481590), mRNA Length = 3227 Score = 180 bits (91), Expect = 2e-42 Identities = 226/271 (83%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 |||| |||||||| || ||||| |||||||||| ||||| |||||| |||||||| | Sbjct: 1563 gggaggatattgggggcctggaggatgtcaaacgtgagcttcaggagctggtccagtatc 1622 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 |||||||||| ||||| |||||| |||||||||||| | || |||||||| || || | Sbjct: 1623 ctgtggagcacccagacaaattcctcaagtttggcatgacaccctccaaaggagtactct 1682 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| || ||||| ||||| ||||||||| ||||||| || ||||| ||||| |||| Sbjct: 1683 tctatggaccccctggctgtgggaaaaccttgctggccaaagccattgctaatgaatgcc 1742 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| ||||||||| ||||||||| ||||||||||| |||||||||||||| ||| || Sbjct: 1743 aggccaacttcatctctatcaagggtcctgagctgctcaccatgtggtttggggagtctg 1802 Query: 252 aggctaatgtgcgtgagatctttgacaaggc 282 | || ||||| | || |||||||||||||| Sbjct: 1803 aagccaatgtcagggaaatctttgacaaggc 1833
>ref|XM_861044.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 9 (LOC481590), mRNA Length = 3302 Score = 180 bits (91), Expect = 2e-42 Identities = 226/271 (83%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 |||| |||||||| || ||||| |||||||||| ||||| |||||| |||||||| | Sbjct: 1638 gggaggatattgggggcctggaggatgtcaaacgtgagcttcaggagctggtccagtatc 1697 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 |||||||||| ||||| |||||| |||||||||||| | || |||||||| || || | Sbjct: 1698 ctgtggagcacccagacaaattcctcaagtttggcatgacaccctccaaaggagtactct 1757 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| || ||||| ||||| ||||||||| ||||||| || ||||| ||||| |||| Sbjct: 1758 tctatggaccccctggctgtgggaaaaccttgctggccaaagccattgctaatgaatgcc 1817 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| ||||||||| ||||||||| ||||||||||| |||||||||||||| ||| || Sbjct: 1818 aggccaacttcatctctatcaagggtcctgagctgctcaccatgtggtttggggagtctg 1877 Query: 252 aggctaatgtgcgtgagatctttgacaaggc 282 | || ||||| | || |||||||||||||| Sbjct: 1878 aagccaatgtcagggaaatctttgacaaggc 1908
>ref|XM_860982.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 5 (LOC481590), mRNA Length = 2660 Score = 180 bits (91), Expect = 2e-42 Identities = 226/271 (83%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 |||| |||||||| || ||||| |||||||||| ||||| |||||| |||||||| | Sbjct: 1695 gggaggatattgggggcctggaggatgtcaaacgtgagcttcaggagctggtccagtatc 1754 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 |||||||||| ||||| |||||| |||||||||||| | || |||||||| || || | Sbjct: 1755 ctgtggagcacccagacaaattcctcaagtttggcatgacaccctccaaaggagtactct 1814 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| || ||||| ||||| ||||||||| ||||||| || ||||| ||||| |||| Sbjct: 1815 tctatggaccccctggctgtgggaaaaccttgctggccaaagccattgctaatgaatgcc 1874 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| ||||||||| ||||||||| ||||||||||| |||||||||||||| ||| || Sbjct: 1875 aggccaacttcatctctatcaagggtcctgagctgctcaccatgtggtttggggagtctg 1934 Query: 252 aggctaatgtgcgtgagatctttgacaaggc 282 | || ||||| | || |||||||||||||| Sbjct: 1935 aagccaatgtcagggaaatctttgacaaggc 1965
>ref|XM_860961.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 4 (LOC481590), mRNA Length = 3361 Score = 180 bits (91), Expect = 2e-42 Identities = 226/271 (83%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 |||| |||||||| || ||||| |||||||||| ||||| |||||| |||||||| | Sbjct: 1697 gggaggatattgggggcctggaggatgtcaaacgtgagcttcaggagctggtccagtatc 1756 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 |||||||||| ||||| |||||| |||||||||||| | || |||||||| || || | Sbjct: 1757 ctgtggagcacccagacaaattcctcaagtttggcatgacaccctccaaaggagtactct 1816 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| || ||||| ||||| ||||||||| ||||||| || ||||| ||||| |||| Sbjct: 1817 tctatggaccccctggctgtgggaaaaccttgctggccaaagccattgctaatgaatgcc 1876 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| ||||||||| ||||||||| ||||||||||| |||||||||||||| ||| || Sbjct: 1877 aggccaacttcatctctatcaagggtcctgagctgctcaccatgtggtttggggagtctg 1936 Query: 252 aggctaatgtgcgtgagatctttgacaaggc 282 | || ||||| | || |||||||||||||| Sbjct: 1937 aagccaatgtcagggaaatctttgacaaggc 1967
>ref|XM_847533.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 3 (LOC481590), mRNA Length = 3359 Score = 180 bits (91), Expect = 2e-42 Identities = 226/271 (83%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 |||| |||||||| || ||||| |||||||||| ||||| |||||| |||||||| | Sbjct: 1695 gggaggatattgggggcctggaggatgtcaaacgtgagcttcaggagctggtccagtatc 1754 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 |||||||||| ||||| |||||| |||||||||||| | || |||||||| || || | Sbjct: 1755 ctgtggagcacccagacaaattcctcaagtttggcatgacaccctccaaaggagtactct 1814 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| || ||||| ||||| ||||||||| ||||||| || ||||| ||||| |||| Sbjct: 1815 tctatggaccccctggctgtgggaaaaccttgctggccaaagccattgctaatgaatgcc 1874 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| ||||||||| ||||||||| ||||||||||| |||||||||||||| ||| || Sbjct: 1875 aggccaacttcatctctatcaagggtcctgagctgctcaccatgtggtttggggagtctg 1934 Query: 252 aggctaatgtgcgtgagatctttgacaaggc 282 | || ||||| | || |||||||||||||| Sbjct: 1935 aagccaatgtcagggaaatctttgacaaggc 1965
>emb|AL132958.1|ATT4D2 Arabidopsis thaliana DNA chromosome 3, BAC clone T4D2 Length = 92611 Score = 180 bits (91), Expect = 2e-42 Identities = 220/263 (83%) Strand = Plus / Plus Query: 20 attggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtaccctgtggag 79 ||||||||||| || |||||||| ||||||| || |||||||| || || || |||||| Sbjct: 49462 attggtggtcttgagaatgtcaagagggagctccaagagactgttcaatatccagtggag 49521 Query: 80 catccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgttctatggc 139 ||||| |||||||||||||||||||| ||||| || || ||||| || || ||||||||| Sbjct: 49522 catcctgagaaattcgagaagtttgggatgtcaccgtctaaaggagtcctattctatggc 49581 Query: 140 cctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgccaggctaac 199 || ||||| ||||| || ||| | ||||| ||||| ||||| || ||||| || || ||| Sbjct: 49582 ccccctggttgtggaaagaccctcttggctaaggctattgcgaacgagtgtcaagccaac 49641 Query: 200 ttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtgaggctaat 259 ||||| ||||||||||| |||||||| || || ||||||||||| |||||||| || ||| Sbjct: 49642 ttcattagtatcaagggtcctgagctcctcacaatgtggtttggagagagtgaagccaat 49701 Query: 260 gtgcgtgagatctttgacaaggc 282 ||| | ||||| || |||||||| Sbjct: 49702 gtgagagagatattcgacaaggc 49724
>gb|BC103125.1| Bos taurus similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), mRNA (cDNA clone MGC:128142 IMAGE:7988284), complete cds Length = 3258 Score = 180 bits (91), Expect = 2e-42 Identities = 208/247 (84%) Strand = Plus / Plus Query: 36 atgtcaaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcg 95 |||||||||| ||||| |||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 1712 atgtcaaacgtgagcttcaggagctggtccagtatcctgtggagcacccagacaaattcc 1771 Query: 96 agaagtttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggta 155 |||||||||||| | || ||||| || || ||||||||||| |||||||| ||||| | Sbjct: 1772 tcaagtttggcatgacaccctccaagggagtactgttctatggacctcctggctgtggga 1831 Query: 156 aaaccttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagg 215 |||||||| ||||||| || ||||| |||||||||||||| ||||||||| ||||||| Sbjct: 1832 aaaccttgctggccaaagccattgctaatgagtgccaggccaacttcatctccatcaagg 1891 Query: 216 gacctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttg 275 | ||||||||||| |||||||||||||| ||| |||||| || ||| | || ||||| | Sbjct: 1892 gtcctgagctgctcaccatgtggtttggagagtctgaggccaacgtgagggaaatcttcg 1951 Query: 276 acaaggc 282 ||||||| Sbjct: 1952 acaaggc 1958
>ref|NG_002295.1| Mus musculus valosin containing protein pseudogene (Vcp-ps) on chromosome X Length = 3607 Score = 180 bits (91), Expect = 2e-42 Identities = 226/271 (83%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 ||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||||| Sbjct: 1947 gggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtacc 2006 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 | ||||| |||||||| |||||| || ||||||||| | || |||||||||||||| | Sbjct: 2007 ccgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggtgttcttt 2066 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| |||| Sbjct: 2067 tctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgcc 2126 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| ||||||||| |||||||| |||||||||||||||||||||||||| || || Sbjct: 2127 aggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatctg 2186 Query: 252 aggctaatgtgcgtgagatctttgacaaggc 282 |||| ||||| || || || ||||||||||| Sbjct: 2187 aggccaatgtccgggaaatttttgacaaggc 2217 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gtgtactcttctttgatgag 319 |||||||||||||||||||| Sbjct: 2220 gtgtactcttctttgatgag 2239
>gb|AF122048.1|AF122048 Mus musculus p97 ATPase pseudogene, complete sequence Length = 3607 Score = 180 bits (91), Expect = 2e-42 Identities = 226/271 (83%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 ||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||||| Sbjct: 1947 gggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtacc 2006 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 | ||||| |||||||| |||||| || ||||||||| | || |||||||||||||| | Sbjct: 2007 ccgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggtgttcttt 2066 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| |||| Sbjct: 2067 tctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgcc 2126 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| ||||||||| |||||||| |||||||||||||||||||||||||| || || Sbjct: 2127 aggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatctg 2186 Query: 252 aggctaatgtgcgtgagatctttgacaaggc 282 |||| ||||| || || || ||||||||||| Sbjct: 2187 aggccaatgtccgggaaatttttgacaaggc 2217 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gtgtactcttctttgatgag 319 |||||||||||||||||||| Sbjct: 2220 gtgtactcttctttgatgag 2239
>emb|AL663052.8| Mouse DNA sequence from clone RP23-202N14 on chromosome X, complete sequence Length = 202972 Score = 180 bits (91), Expect = 2e-42 Identities = 226/271 (83%) Strand = Plus / Minus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 ||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||||| Sbjct: 123504 gggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtacc 123445 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 | ||||| |||||||| |||||| || ||||||||| | || |||||||||||||| | Sbjct: 123444 ccgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggtgttcttt 123385 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| |||| Sbjct: 123384 tctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgcc 123325 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| ||||||||| |||||||| |||||||||||||||||||||||||| || || Sbjct: 123324 aggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatctg 123265 Query: 252 aggctaatgtgcgtgagatctttgacaaggc 282 |||| ||||| || || || ||||||||||| Sbjct: 123264 aggccaatgtccgggaaatttttgacaaggc 123234 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 gtgtactcttctttgatgag 319 |||||||||||||||||||| Sbjct: 123231 gtgtactcttctttgatgag 123212
>gb|BC049114.1| Mus musculus valosin containing protein, mRNA (cDNA clone MGC:61308 IMAGE:6810751), complete cds Length = 2876 Score = 174 bits (88), Expect = 1e-40 Identities = 253/308 (82%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 ||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| | Sbjct: 1704 gggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtatc 1763 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 ||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| | Sbjct: 1764 ctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttcttt 1823 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| |||| Sbjct: 1824 tctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgcc 1883 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| ||||||||| |||||||| |||||||||||||||||||||||||| || || Sbjct: 1884 aggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatctg 1943 Query: 252 aggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttct 311 |||| ||||| || || || ||||||||||| || | || || ||||||||||||| Sbjct: 1944 aggccaatgtccgggaaatttttgacaaggcacggcaagctgccccctgtgtactcttct 2003 Query: 312 ttgatgag 319 |||||||| Sbjct: 2004 ttgatgag 2011
>ref|NM_009503.2| Mus musculus valosin containing protein (Vcp), mRNA Length = 3245 Score = 174 bits (88), Expect = 1e-40 Identities = 253/308 (82%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 ||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| | Sbjct: 1685 gggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtatc 1744 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 ||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| | Sbjct: 1745 ctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttcttt 1804 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| |||| Sbjct: 1805 tctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgcc 1864 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| ||||||||| |||||||| |||||||||||||||||||||||||| || || Sbjct: 1865 aggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatctg 1924 Query: 252 aggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttct 311 |||| ||||| || || || ||||||||||| || | || || ||||||||||||| Sbjct: 1925 aggccaatgtccgggaaatttttgacaaggcacggcaagctgccccctgtgtactcttct 1984 Query: 312 ttgatgag 319 |||||||| Sbjct: 1985 ttgatgag 1992
>dbj|AK149931.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530106G21 product:valosin containing protein, full insert sequence Length = 2803 Score = 174 bits (88), Expect = 1e-40 Identities = 253/308 (82%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 ||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| | Sbjct: 1649 gggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtatc 1708 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 ||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| | Sbjct: 1709 ctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttcttt 1768 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| |||| Sbjct: 1769 tctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgcc 1828 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| ||||||||| |||||||| |||||||||||||||||||||||||| || || Sbjct: 1829 aggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatctg 1888 Query: 252 aggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttct 311 |||| ||||| || || || ||||||||||| || | || || ||||||||||||| Sbjct: 1889 aggccaatgtccgggaaatttttgacaaggcacggcaagctgccccctgtgtactcttct 1948 Query: 312 ttgatgag 319 |||||||| Sbjct: 1949 ttgatgag 1956
>dbj|AK146109.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530030L06 product:valosin containing protein, full insert sequence Length = 2855 Score = 174 bits (88), Expect = 1e-40 Identities = 253/308 (82%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 ||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| | Sbjct: 1651 gggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtatc 1710 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 ||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| | Sbjct: 1711 ctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttcttt 1770 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| |||| Sbjct: 1771 tctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgcc 1830 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| ||||||||| |||||||| |||||||||||||||||||||||||| || || Sbjct: 1831 aggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatctg 1890 Query: 252 aggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttct 311 |||| ||||| || || || ||||||||||| || | || || ||||||||||||| Sbjct: 1891 aggccaatgtccgggaaatttttgacaaggcacggcaagctgccccctgtgtactcttct 1950 Query: 312 ttgatgag 319 |||||||| Sbjct: 1951 ttgatgag 1958
>dbj|AK153012.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830114G12 product:valosin containing protein, full insert sequence Length = 2841 Score = 174 bits (88), Expect = 1e-40 Identities = 253/308 (82%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 ||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| | Sbjct: 1687 gggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtatc 1746 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 ||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| | Sbjct: 1747 ctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttcttt 1806 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| |||| Sbjct: 1807 tctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgcc 1866 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| ||||||||| |||||||| |||||||||||||||||||||||||| || || Sbjct: 1867 aggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatctg 1926 Query: 252 aggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttct 311 |||| ||||| || || || ||||||||||| || | || || ||||||||||||| Sbjct: 1927 aggccaatgtccgggaaatttttgacaaggcacggcaagctgccccctgtgtactcttct 1986 Query: 312 ttgatgag 319 |||||||| Sbjct: 1987 ttgatgag 1994
>dbj|AK159177.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420007G04 product:valosin containing protein, full insert sequence Length = 2890 Score = 174 bits (88), Expect = 1e-40 Identities = 253/308 (82%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 ||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| | Sbjct: 1685 gggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtatc 1744 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 ||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| | Sbjct: 1745 ctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttcttt 1804 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| |||| Sbjct: 1805 tctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgcc 1864 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| ||||||||| |||||||| |||||||||||||||||||||||||| || || Sbjct: 1865 aggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatctg 1924 Query: 252 aggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttct 311 |||| ||||| || || || ||||||||||| || | || || ||||||||||||| Sbjct: 1925 aggccaatgtccgggaaatttttgacaaggcacggcaagctgccccctgtgtactcttct 1984 Query: 312 ttgatgag 319 |||||||| Sbjct: 1985 ttgatgag 1992
>dbj|AK151418.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830029K16 product:valosin containing protein, full insert sequence Length = 3210 Score = 174 bits (88), Expect = 1e-40 Identities = 253/308 (82%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 ||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| | Sbjct: 1650 gggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtatc 1709 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 ||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| | Sbjct: 1710 ctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttcttt 1769 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| |||| Sbjct: 1770 tctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgcc 1829 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| ||||||||| |||||||| |||||||||||||||||||||||||| || || Sbjct: 1830 aggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatctg 1889 Query: 252 aggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttct 311 |||| ||||| || || || ||||||||||| || | || || ||||||||||||| Sbjct: 1890 aggccaatgtccgggaaatttttgacaaggcacggcaagctgccccctgtgtactcttct 1949 Query: 312 ttgatgag 319 |||||||| Sbjct: 1950 ttgatgag 1957
>dbj|AK167794.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730026E20 product:valosin containing protein, full insert sequence Length = 2858 Score = 174 bits (88), Expect = 1e-40 Identities = 253/308 (82%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 ||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| | Sbjct: 1704 gggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtatc 1763 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 ||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| | Sbjct: 1764 ctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttcttt 1823 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| |||| Sbjct: 1824 tctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgcc 1883 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| ||||||||| |||||||| |||||||||||||||||||||||||| || || Sbjct: 1884 aggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatctg 1943 Query: 252 aggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttct 311 |||| ||||| || || || ||||||||||| || | || || ||||||||||||| Sbjct: 1944 aggccaatgtccgggaaatttttgacaaggcacggcaagctgccccctgtgtactcttct 2003 Query: 312 ttgatgag 319 |||||||| Sbjct: 2004 ttgatgag 2011
>dbj|AK160889.1| Mus musculus 12 days embryo embryonic body below diaphragm region cDNA, RIKEN full-length enriched library, clone:3732413B21 product:valosin containing protein, full insert sequence Length = 2726 Score = 174 bits (88), Expect = 1e-40 Identities = 253/308 (82%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 ||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| | Sbjct: 1571 gggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtatc 1630 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 ||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| | Sbjct: 1631 ctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttcttt 1690 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| |||| Sbjct: 1691 tctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgcc 1750 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| ||||||||| |||||||| |||||||||||||||||||||||||| || || Sbjct: 1751 aggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatctg 1810 Query: 252 aggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttct 311 |||| ||||| || || || ||||||||||| || | || || ||||||||||||| Sbjct: 1811 aggccaatgtccgggaaatttttgacaaggcacggcaagctgccccctgtgtactcttct 1870 Query: 312 ttgatgag 319 |||||||| Sbjct: 1871 ttgatgag 1878
>dbj|AK153249.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830129H23 product:valosin containing protein, full insert sequence Length = 3286 Score = 174 bits (88), Expect = 1e-40 Identities = 253/308 (82%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 ||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| | Sbjct: 1727 gggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtatc 1786 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 ||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| | Sbjct: 1787 ctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttcttt 1846 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| |||| Sbjct: 1847 tctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgcc 1906 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| ||||||||| |||||||| |||||||||||||||||||||||||| || || Sbjct: 1907 aggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatctg 1966 Query: 252 aggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttct 311 |||| ||||| || || || ||||||||||| || | || || ||||||||||||| Sbjct: 1967 aggccaatgtccgggaaatttttgacaaggcacggcaagctgccccctgtgtactcttct 2026 Query: 312 ttgatgag 319 |||||||| Sbjct: 2027 ttgatgag 2034
>dbj|AK159509.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420022F22 product:valosin containing protein, full insert sequence Length = 2882 Score = 174 bits (88), Expect = 1e-40 Identities = 253/308 (82%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 ||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| | Sbjct: 1728 gggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtatc 1787 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 ||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| | Sbjct: 1788 ctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttcttt 1847 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| |||| Sbjct: 1848 tctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgcc 1907 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| ||||||||| |||||||| |||||||||||||||||||||||||| || || Sbjct: 1908 aggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatctg 1967 Query: 252 aggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttct 311 |||| ||||| || || || ||||||||||| || | || || ||||||||||||| Sbjct: 1968 aggccaatgtccgggaaatttttgacaaggcacggcaagctgccccctgtgtactcttct 2027 Query: 312 ttgatgag 319 |||||||| Sbjct: 2028 ttgatgag 2035
>dbj|AK169140.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920083B16 product:valosin containing protein, full insert sequence Length = 2812 Score = 174 bits (88), Expect = 1e-40 Identities = 253/308 (82%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 ||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| | Sbjct: 1658 gggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtatc 1717 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 ||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| | Sbjct: 1718 ctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttcttt 1777 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| |||| Sbjct: 1778 tctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgcc 1837 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| ||||||||| |||||||| |||||||||||||||||||||||||| || || Sbjct: 1838 aggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatctg 1897 Query: 252 aggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttct 311 |||| ||||| || || || ||||||||||| || | || || ||||||||||||| Sbjct: 1898 aggccaatgtccgggaaatttttgacaaggcacggcaagctgccccctgtgtactcttct 1957 Query: 312 ttgatgag 319 |||||||| Sbjct: 1958 ttgatgag 1965
>dbj|AK151109.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830025E07 product:valosin containing protein, full insert sequence Length = 3210 Score = 174 bits (88), Expect = 1e-40 Identities = 253/308 (82%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 ||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| | Sbjct: 1650 gggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtatc 1709 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 ||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| | Sbjct: 1710 ctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttcttt 1769 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| |||| Sbjct: 1770 tctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgcc 1829 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| ||||||||| |||||||| |||||||||||||||||||||||||| || || Sbjct: 1830 aggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatctg 1889 Query: 252 aggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttct 311 |||| ||||| || || || ||||||||||| || | || || ||||||||||||| Sbjct: 1890 aggccaatgtccgggaaatttttgacaaggcacggcaagctgccccctgtgtactcttct 1949 Query: 312 ttgatgag 319 |||||||| Sbjct: 1950 ttgatgag 1957
>dbj|AK010612.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410030B05 product:transitional endoplasmic reticulum ATPase homolog [Sus scrofa domestica], full insert sequence Length = 1665 Score = 174 bits (88), Expect = 1e-40 Identities = 253/308 (82%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 ||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| | Sbjct: 106 gggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtatc 165 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 ||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| | Sbjct: 166 ctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttcttt 225 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| |||| Sbjct: 226 tctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgcc 285 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| ||||||||| |||||||| |||||||||||||||||||||||||| || || Sbjct: 286 aggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatctg 345 Query: 252 aggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttct 311 |||| ||||| || || || ||||||||||| || | || || ||||||||||||| Sbjct: 346 aggccaatgtccgggaaatttttgacaaggcacggcaagctgccccctgtgtactcttct 405 Query: 312 ttgatgag 319 |||||||| Sbjct: 406 ttgatgag 413
>dbj|AK083821.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130015G23 product:valosin containing protein, full insert sequence Length = 2416 Score = 174 bits (88), Expect = 1e-40 Identities = 253/308 (82%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 ||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| | Sbjct: 1262 gggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtatc 1321 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 ||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| | Sbjct: 1322 ctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttcttt 1381 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| |||| Sbjct: 1382 tctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgcc 1441 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| ||||||||| |||||||| |||||||||||||||||||||||||| || || Sbjct: 1442 aggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatctg 1501 Query: 252 aggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttct 311 |||| ||||| || || || ||||||||||| || | || || ||||||||||||| Sbjct: 1502 aggccaatgtccgggaaatttttgacaaggcacggcaagctgccccctgtgtactcttct 1561 Query: 312 ttgatgag 319 |||||||| Sbjct: 1562 ttgatgag 1569
>dbj|AK028264.1| Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched library, clone:3110001E05 product:valosin containing protein, full insert sequence Length = 3245 Score = 174 bits (88), Expect = 1e-40 Identities = 253/308 (82%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 ||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| | Sbjct: 1685 gggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtatc 1744 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 ||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| | Sbjct: 1745 ctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttcttt 1804 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| |||| Sbjct: 1805 tctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgcc 1864 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| ||||||||| |||||||| |||||||||||||||||||||||||| || || Sbjct: 1865 aggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatctg 1924 Query: 252 aggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttct 311 |||| ||||| || || || ||||||||||| || | || || ||||||||||||| Sbjct: 1925 aggccaatgtccgggaaatttttgacaaggcacggcaagctgccccctgtgtactcttct 1984 Query: 312 ttgatgag 319 |||||||| Sbjct: 1985 ttgatgag 1992
>dbj|AK030751.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730519N02 product:valosin containing protein, full insert sequence Length = 3091 Score = 174 bits (88), Expect = 1e-40 Identities = 253/308 (82%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 ||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| | Sbjct: 1587 gggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtatc 1646 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 ||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| | Sbjct: 1647 ctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttcttt 1706 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| |||| Sbjct: 1707 tctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgcc 1766 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| ||||||||| |||||||| |||||||||||||||||||||||||| || || Sbjct: 1767 aggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatctg 1826 Query: 252 aggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttct 311 |||| ||||| || || || ||||||||||| || | || || ||||||||||||| Sbjct: 1827 aggccaatgtccgggaaatttttgacaaggcacggcaagctgccccctgtgtactcttct 1886 Query: 312 ttgatgag 319 |||||||| Sbjct: 1887 ttgatgag 1894
>gb|BC043053.1| Mus musculus valosin containing protein, mRNA (cDNA clone MGC:57954 IMAGE:6418662), complete cds Length = 2898 Score = 174 bits (88), Expect = 1e-40 Identities = 253/308 (82%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 ||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| | Sbjct: 1660 gggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtatc 1719 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 ||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| | Sbjct: 1720 ctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttcttt 1779 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| |||| Sbjct: 1780 tctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgcc 1839 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| ||||||||| |||||||| |||||||||||||||||||||||||| || || Sbjct: 1840 aggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggggaatctg 1899 Query: 252 aggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttct 311 |||| ||||| || || || ||||||||||| || | || || ||||||||||||| Sbjct: 1900 aggccaatgtccgggaaatttttgacaaggcacggcaagctgccccctgtgtactcttct 1959 Query: 312 ttgatgag 319 |||||||| Sbjct: 1960 ttgatgag 1967
>gb|AY456394.1| 'Chlorella' ellipsoidea cell division cycle protein 48 mRNA, partial cds Length = 2033 Score = 170 bits (86), Expect = 2e-39 Identities = 206/246 (83%) Strand = Plus / Plus Query: 38 gtcaaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgag 97 ||||| || |||||||||||| || |||||||| |||||||| || ||||| |||||| Sbjct: 873 gtcaagcgcgagctgcaggaggtggtgcagtacccagtggagcaccccgagaagttcgag 932 Query: 98 aagtttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaa 157 ||||| ||||||||||| ||||| || || |||||||||||||| || || || || || Sbjct: 933 aagttcggcatgtccccctccaagggagtgctgttctatggcccaccagggtgcggaaag 992 Query: 158 accttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaaggga 217 || | || ||||| ||||| |||||||||||||| ||||||||||| ||||||| Sbjct: 993 acaccccttgcaaaggcgattgccaatgagtgccaggccaacttcatcagcgtcaagggg 1052 Query: 218 cctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgac 277 ||||||||||| ||||||||||| |||||||||||||| || |||||||||||| | ||| Sbjct: 1053 cctgagctgctcaccatgtggttcggtgagagtgaggccaacgtgcgtgagatcctcgac 1112 Query: 278 aaggct 283 |||||| Sbjct: 1113 aaggct 1118
>dbj|AK159475.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420020M12 product:valosin containing protein, full insert sequence Length = 2859 Score = 161 bits (81), Expect = 2e-36 Identities = 192/229 (83%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 ||||||||||||| || ||||| |||||||||| ||||| |||||| || ||||| | Sbjct: 1684 gggaagatattggaggcctggaggatgtcaaacgtgagcttcaggagttggttcagtatc 1743 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 ||||||| |||||||| |||||| || ||||||||| | || |||||||| ||||| | Sbjct: 1744 ctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcgttcttt 1803 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| |||||||| ||||| |||||||| |||| || || ||||| ||||| |||| Sbjct: 1804 tctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatgaatgcc 1863 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtt 240 |||| ||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 1864 aggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtt 1912
>gb|AY609417.1| Sus scrofa clone Clu_1080.scr.msk.p1.Contig5, mRNA sequence Length = 3968 Score = 159 bits (80), Expect = 7e-36 Identities = 176/208 (84%) Strand = Plus / Plus Query: 36 atgtcaaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcg 95 |||||||||| ||||| |||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 1629 atgtcaaacgtgagcttcaggagctggtccagtatcctgtggagcacccagacaaattcc 1688 Query: 96 agaagtttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggta 155 |||||||||||| | || ||||| || || || |||||||| |||||||| ||||| | Sbjct: 1689 tcaagtttggcatgacaccctccaagggagtgctattctatggacctcctggctgtggga 1748 Query: 156 aaaccttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagg 215 |||||||| ||||||| || ||||| |||||||||||||| ||||||||| ||||| | Sbjct: 1749 aaaccttgctggccaaagccattgctaatgagtgccaggccaacttcatctccatcaaag 1808 Query: 216 gacctgagctgcttaccatgtggtttgg 243 | ||||||||||| |||||||||||||| Sbjct: 1809 gtcctgagctgctcaccatgtggtttgg 1836
>ref|NM_111819.3| Arabidopsis thaliana CDC48 (CELL DIVISION CYCLE 48); ATP binding / ATPase/ hydrolase/ nucleoside-triphosphatase/ nucleotide binding AT3G09840 (CDC48) mRNA, complete cds Length = 2797 Score = 157 bits (79), Expect = 3e-35 Identities = 269/331 (81%), Gaps = 1/331 (0%) Strand = Plus / Plus Query: 17 gatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtaccctgtg 76 |||||||| ||||| || |||||||| | ||||| ||||||||||| || ||||| || Sbjct: 1595 gatattggaggtcttgagaatgtcaagagagagctccaggagactgttcaatacccagtc 1654 Query: 77 gagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgttctat 136 ||||| |||||||| || ||||| || || ||||| || || || || || || ||||| Sbjct: 1655 gagcacccagagaagtttgagaaattcgggatgtctccatcaaagggagtccttttctac 1714 Query: 137 ggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgccaggct 196 || |||||||||||||| |||||| | |||||||| || ||||| || |||||||| ||| Sbjct: 1715 ggtcctcctggatgtgggaaaacccttttggccaaagctattgccaacgagtgccaagct 1774 Query: 197 aacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtgaggct 256 || ||||||||| ||||||| || ||||| || || ||||||||||| |||||||| || Sbjct: 1775 aatttcatcagtgtcaagggtcccgagcttctgacaatgtggtttggagagagtgaagca 1834 Query: 257 aatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttctttgat 316 ||||| ||||| ||||| |||||||| | || || |||||||| || ||||||||| Sbjct: 1835 aatgttcgtgaaatcttcgacaaggcccgtcaatccgctccatgtgttcttttctttgat 1894 Query: 317 gagctttgactctattgctacccagagagga 347 |||| | ||||| ||||| || ||||||||| Sbjct: 1895 gagc-tcgactccattgcaactcagagagga 1924
>gb|AY094434.1| Arabidopsis thaliana AT3g09840/F8A24_11 mRNA, complete cds Length = 2628 Score = 157 bits (79), Expect = 3e-35 Identities = 269/331 (81%), Gaps = 1/331 (0%) Strand = Plus / Plus Query: 17 gatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtaccctgtg 76 |||||||| ||||| || |||||||| | ||||| ||||||||||| || ||||| || Sbjct: 1551 gatattggaggtcttgagaatgtcaagagagagctccaggagactgttcaatacccagtc 1610 Query: 77 gagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgttctat 136 ||||| |||||||| || ||||| || || ||||| || || || || || || ||||| Sbjct: 1611 gagcacccagagaagtttgagaaattcgggatgtctccatcaaagggagtccttttctac 1670 Query: 137 ggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgccaggct 196 || |||||||||||||| |||||| | |||||||| || ||||| || |||||||| ||| Sbjct: 1671 ggtcctcctggatgtgggaaaacccttttggccaaagctattgccaacgagtgccaagct 1730 Query: 197 aacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtgaggct 256 || ||||||||| ||||||| || ||||| || || ||||||||||| |||||||| || Sbjct: 1731 aatttcatcagtgtcaagggtcccgagcttctgacaatgtggtttggagagagtgaagca 1790 Query: 257 aatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttctttgat 316 ||||| ||||| ||||| |||||||| | || || |||||||| || ||||||||| Sbjct: 1791 aatgttcgtgaaatcttcgacaaggcccgtcaatccgctccatgtgttcttttctttgat 1850 Query: 317 gagctttgactctattgctacccagagagga 347 |||| | ||||| ||||| || ||||||||| Sbjct: 1851 gagc-tcgactccattgcaactcagagagga 1880
>gb|AY065076.1| Arabidopsis thaliana putative transitional endoplasmic reticulum ATPase (F8A24.11) mRNA, complete cds Length = 2730 Score = 157 bits (79), Expect = 3e-35 Identities = 269/331 (81%), Gaps = 1/331 (0%) Strand = Plus / Plus Query: 17 gatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtaccctgtg 76 |||||||| ||||| || |||||||| | ||||| ||||||||||| || ||||| || Sbjct: 1585 gatattggaggtcttgagaatgtcaagagagagctccaggagactgttcaatacccagtc 1644 Query: 77 gagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgttctat 136 ||||| |||||||| || ||||| || || ||||| || || || || || || ||||| Sbjct: 1645 gagcacccagagaagtttgagaaattcgggatgtctccatcaaagggagtccttttctac 1704 Query: 137 ggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgccaggct 196 || |||||||||||||| |||||| | |||||||| || ||||| || |||||||| ||| Sbjct: 1705 ggtcctcctggatgtgggaaaacccttttggccaaagctattgccaacgagtgccaagct 1764 Query: 197 aacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtgaggct 256 || ||||||||| ||||||| || ||||| || || ||||||||||| |||||||| || Sbjct: 1765 aatttcatcagtgtcaagggtcccgagcttctgacaatgtggtttggagagagtgaagca 1824 Query: 257 aatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttctttgat 316 ||||| ||||| ||||| |||||||| | || || |||||||| || ||||||||| Sbjct: 1825 aatgttcgtgaaatcttcgacaaggcccgtcaatccgctccatgtgttcttttctttgat 1884 Query: 317 gagctttgactctattgctacccagagagga 347 |||| | ||||| ||||| || ||||||||| Sbjct: 1885 gagc-tcgactccattgcaactcagagagga 1914
>gb|U37587.1|ATU37587 Arabidopsis thaliana cell division cycle protein (CDC48) mRNA, complete cds Length = 2638 Score = 157 bits (79), Expect = 3e-35 Identities = 269/331 (81%), Gaps = 1/331 (0%) Strand = Plus / Plus Query: 17 gatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtaccctgtg 76 |||||||| ||||| || |||||||| | ||||| ||||||||||| || ||||| || Sbjct: 1534 gatattggaggtcttgagaatgtcaagagagagctccaggagactgttcaatacccagtc 1593 Query: 77 gagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgttctat 136 ||||| |||||||| || ||||| || || ||||| || || || || || || ||||| Sbjct: 1594 gagcacccagagaagtttgagaaattcgggatgtctccatcaaagggagtccttttctac 1653 Query: 137 ggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgccaggct 196 || |||||||||||||| |||||| | |||||||| || ||||| || |||||||| ||| Sbjct: 1654 ggtcctcctggatgtgggaaaacccttttggccaaagctattgccaacgagtgccaagct 1713 Query: 197 aacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtgaggct 256 || ||||||||| ||||||| || ||||| || || ||||||||||| |||||||| || Sbjct: 1714 aatttcatcagtgtcaagggtcccgagcttctgacaatgtggtttggagagagtgaagca 1773 Query: 257 aatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttctttgat 316 ||||| ||||| ||||| |||||||| | || || |||||||| || ||||||||| Sbjct: 1774 aatgttcgtgaaatcttcgacaaggcccgtcaatccgctccatgtgttcttttctttgat 1833 Query: 317 gagctttgactctattgctacccagagagga 347 |||| | ||||| ||||| || ||||||||| Sbjct: 1834 gagc-tcgactccattgcaactcagagagga 1863
>ref|NM_214280.1| Sus scrofa valosin-containing protein (VCP), mRNA Length = 3147 Score = 151 bits (76), Expect = 2e-33 Identities = 175/208 (84%) Strand = Plus / Plus Query: 36 atgtcaaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcg 95 |||||||||| ||||| ||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 1623 atgtcaaacgtgagcttcaggacctggtccagtatcctgtggagcacccagacaaattcc 1682 Query: 96 agaagtttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggta 155 |||||||||||| | || ||||| || || || |||||||| |||||||| ||||| | Sbjct: 1683 tcaagtttggcatgacaccctccaagggagtgctattctatggacctcctggctgtggga 1742 Query: 156 aaaccttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagg 215 |||||||| ||||||| || ||||| |||||||||||||| ||||||||| ||||| | Sbjct: 1743 aaaccttgctggccaaagccattgctaatgagtgccaggccaacttcatctccatcaaag 1802 Query: 216 gacctgagctgcttaccatgtggtttgg 243 | ||||||||||| |||||||||||||| Sbjct: 1803 gtcctgagctgctcaccatgtggtttgg 1830
>gb|M30143.1|PIGVALA Pig valosin-containing protein (VCP) mRNA, complete cds Length = 3147 Score = 151 bits (76), Expect = 2e-33 Identities = 175/208 (84%) Strand = Plus / Plus Query: 36 atgtcaaacgggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcg 95 |||||||||| ||||| ||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 1623 atgtcaaacgtgagcttcaggacctggtccagtatcctgtggagcacccagacaaattcc 1682 Query: 96 agaagtttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggta 155 |||||||||||| | || ||||| || || || |||||||| |||||||| ||||| | Sbjct: 1683 tcaagtttggcatgacaccctccaagggagtgctattctatggacctcctggctgtggga 1742 Query: 156 aaaccttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagg 215 |||||||| ||||||| || ||||| |||||||||||||| ||||||||| ||||| | Sbjct: 1743 aaaccttgctggccaaagccattgctaatgagtgccaggccaacttcatctccatcaaag 1802 Query: 216 gacctgagctgcttaccatgtggtttgg 243 | ||||||||||| |||||||||||||| Sbjct: 1803 gtcctgagctgctcaccatgtggtttgg 1830
>dbj|AK212503.1| Mus musculus cDNA, clone:Y2G0125C20, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 333 Score = 149 bits (75), Expect = 7e-33 Identities = 210/255 (82%) Strand = Plus / Plus Query: 65 cagtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggt 124 ||||| |||||||| |||||||| |||||| || ||||||||| | || |||||||| Sbjct: 22 cagtatcctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggc 81 Query: 125 gttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaat 184 ||||| |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||| Sbjct: 82 gttcttttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaat 141 Query: 185 gagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggt 244 || |||||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 142 gaatgccaggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttggg 201 Query: 245 gagagtgaggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgta 304 || |||||| ||||| || || || ||||||||||| || | || || |||||| Sbjct: 202 gaatctgaggccaatgtccgggaaatttttgacaaggcacggcaagctgccccctgtgta 261 Query: 305 ctcttctttgatgag 319 ||||||||||||||| Sbjct: 262 ctcttctttgatgag 276
>ref|NM_201481.1| Danio rerio valosin containing protein (vcp), mRNA Length = 2659 Score = 145 bits (73), Expect = 1e-31 Identities = 196/237 (82%) Strand = Plus / Plus Query: 47 gagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaagtttggc 106 |||||||||||| || |||||||| |||||||||||||| |||||| ||||||||| Sbjct: 1556 gagctgcaggagctggtgcagtacccagtggagcatccagacaaattcctcaagtttggc 1615 Query: 107 atgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttg 166 ||| | || ||||| ||||| ||||||||||| || || || |||||||||||| | || Sbjct: 1616 atgactccatccaagggtgtgctgttctatggaccaccaggttgtggtaaaacccttctg 1675 Query: 167 gccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctg 226 |||||||| || || |||||||||||||| ||||||||| |||||||| || || ||| Sbjct: 1676 gccaaggccatcgccaatgagtgccaggccaacttcatctcaatcaagggcccagaactg 1735 Query: 227 cttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggct 283 || || ||||||||||| || ||||| ||||| ||||| ||||||||||||||| Sbjct: 1736 ctcactatgtggtttggagaatcagaggcgaatgtccgtgaaatctttgacaaggct 1792
>gb|BC067384.1| Danio rerio valosin containing protein, mRNA (cDNA clone MGC:77072 IMAGE:6960180), complete cds Length = 2635 Score = 145 bits (73), Expect = 1e-31 Identities = 196/237 (82%) Strand = Plus / Plus Query: 47 gagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaagtttggc 106 |||||||||||| || |||||||| |||||||||||||| |||||| ||||||||| Sbjct: 1532 gagctgcaggagctggtgcagtacccagtggagcatccagacaaattcctcaagtttggc 1591 Query: 107 atgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttg 166 ||| | || ||||| ||||| ||||||||||| || || || |||||||||||| | || Sbjct: 1592 atgactccatccaagggtgtgctgttctatggaccaccaggttgtggtaaaacccttctg 1651 Query: 167 gccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctg 226 |||||||| || || |||||||||||||| ||||||||| |||||||| || || ||| Sbjct: 1652 gccaaggccatcgccaatgagtgccaggccaacttcatctcaatcaagggcccagaactg 1711 Query: 227 cttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggct 283 || || ||||||||||| || ||||| ||||| ||||| ||||||||||||||| Sbjct: 1712 ctcactatgtggtttggagaatcagaggcgaatgtccgtgaaatctttgacaaggct 1768
>gb|AY576993.1| Danio rerio clone RK103A4E09 valosin-containing protein mRNA, complete cds Length = 2657 Score = 145 bits (73), Expect = 1e-31 Identities = 196/237 (82%) Strand = Plus / Plus Query: 47 gagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaagtttggc 106 |||||||||||| || |||||||| |||||||||||||| |||||| ||||||||| Sbjct: 1593 gagctgcaggagctggtgcagtacccagtggagcatccagacaaattcctcaagtttggc 1652 Query: 107 atgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttg 166 ||| | || ||||| ||||| ||||||||||| || || || |||||||||||| | || Sbjct: 1653 atgactccatccaagggtgtgctgttctatggaccaccaggttgtggtaaaacccttctg 1712 Query: 167 gccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctg 226 |||||||| || || |||||||||||||| ||||||||| |||||||| || || ||| Sbjct: 1713 gccaaggccatcgccaatgagtgccaggccaacttcatctcaatcaagggcccagaactg 1772 Query: 227 cttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggct 283 || || ||||||||||| || ||||| ||||| ||||| ||||||||||||||| Sbjct: 1773 ctcactatgtggtttggagaatcagaggcgaatgtccgtgaaatctttgacaaggct 1829
>ref|XM_692759.1| PREDICTED: Danio rerio similar to Valosin containing protein (LOC569377), mRNA Length = 1747 Score = 145 bits (73), Expect = 1e-31 Identities = 196/237 (82%) Strand = Plus / Plus Query: 47 gagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaagtttggc 106 |||||||||||| || |||||||| |||||||||||||| |||||| ||||||||| Sbjct: 295 gagctgcaggagctggtgcagtacccagtggagcatccagacaaattcctcaagtttggc 354 Query: 107 atgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttg 166 ||| | || ||||| ||||| ||||||||||| || || || |||||||||||| | || Sbjct: 355 atgactccatccaagggtgtgctgttctatggaccaccaggttgtggtaaaacccttctg 414 Query: 167 gccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctg 226 |||||||| || || |||||||||||||| ||||||||| |||||||| || || ||| Sbjct: 415 gccaaggccatcgccaatgagtgccaggccaacttcatctcaatcaagggcccagaactg 474 Query: 227 cttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggct 283 || || ||||||||||| || ||||| ||||| ||||| ||||||||||||||| Sbjct: 475 ctcactatgtggtttggagaatcagaggcgaatgtccgtgaaatctttgacaaggct 531
>dbj|AB093594.1| Danio rerio CDC48 mRNA, partial cds Length = 2418 Score = 145 bits (73), Expect = 1e-31 Identities = 196/237 (82%) Strand = Plus / Plus Query: 47 gagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaagtttggc 106 |||||||||||| || |||||||| |||||||||||||| |||||| ||||||||| Sbjct: 1462 gagctgcaggagctggtgcagtacccagtggagcatccagacaaattcctcaagtttggc 1521 Query: 107 atgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttg 166 ||| | || ||||| ||||| ||||||||||| || || || |||||||||||| | || Sbjct: 1522 atgactccatccaagggtgtgctgttctatggaccaccaggttgtggtaaaacccttctg 1581 Query: 167 gccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctg 226 |||||||| || || |||||||||||||| ||||||||| |||||||| || || ||| Sbjct: 1582 gccaaggccatcgccaatgagtgccaggccaacttcatctcaatcaagggcccagaactg 1641 Query: 227 cttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggct 283 || || ||||||||||| || ||||| ||||| ||||| ||||||||||||||| Sbjct: 1642 ctcactatgtggtttggagaatcagaggcgaatgtccgtgaaatctttgacaaggct 1698
>gb|BC050488.1| Danio rerio valosin containing protein, mRNA (cDNA clone MGC:56043 IMAGE:3820156), complete cds Length = 2659 Score = 145 bits (73), Expect = 1e-31 Identities = 196/237 (82%) Strand = Plus / Plus Query: 47 gagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaagtttggc 106 |||||||||||| || |||||||| |||||||||||||| |||||| ||||||||| Sbjct: 1556 gagctgcaggagctggtgcagtacccagtggagcatccagacaaattcctcaagtttggc 1615 Query: 107 atgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttg 166 ||| | || ||||| ||||| ||||||||||| || || || |||||||||||| | || Sbjct: 1616 atgactccatccaagggtgtgctgttctatggaccaccaggttgtggtaaaacccttctg 1675 Query: 167 gccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctg 226 |||||||| || || |||||||||||||| ||||||||| |||||||| || || ||| Sbjct: 1676 gccaaggccatcgccaatgagtgccaggccaacttcatctcaatcaagggcccagaactg 1735 Query: 227 cttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggct 283 || || ||||||||||| || ||||| ||||| ||||| ||||||||||||||| Sbjct: 1736 ctcactatgtggtttggagaatcagaggcgaatgtccgtgaaatctttgacaaggct 1792
>dbj|AK132843.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930435I17 product:hypothetical protein, full insert sequence Length = 1018 Score = 143 bits (72), Expect = 4e-31 Identities = 180/216 (83%) Strand = Plus / Minus Query: 66 agtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtg 125 |||| |||||||| |||||||| |||||| || ||||||||| | || |||||||| | Sbjct: 957 agtatcctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcg 898 Query: 126 ttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatg 185 |||| |||||||| |||||||| ||||| |||||||| |||| || || ||||| |||| Sbjct: 897 ttcttttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatg 838 Query: 186 agtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtg 245 | |||||||| ||||||||| |||||||| |||||||||||||||||||||||||| | Sbjct: 837 aatgccaggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgggg 778 Query: 246 agagtgaggctaatgtgcgtgagatctttgacaagg 281 | |||||| ||||| || || || |||||||||| Sbjct: 777 aatctgaggccaatgtccgggaaatttttgacaagg 742 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 299 tgtgtactcttctttgatgag 319 ||||||||||||||||||||| Sbjct: 510 tgtgtactcttctttgatgag 490
>gb|AC005259.1|AC005259 Mouse BAC CitbCJ7 219m7, genomic sequence, complete sequence Length = 124230 Score = 143 bits (72), Expect = 4e-31 Identities = 180/216 (83%) Strand = Plus / Plus Query: 66 agtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtg 125 |||| |||||||| |||||||| |||||| || ||||||||| | || |||||||| | Sbjct: 84795 agtatcctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcg 84854 Query: 126 ttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatg 185 |||| |||||||| |||||||| ||||| |||||||| |||| || || ||||| |||| Sbjct: 84855 ttcttttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatg 84914 Query: 186 agtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtg 245 | |||||||| ||||||||| |||||||| |||||||||||||||||||||||||| | Sbjct: 84915 aatgccaggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgggg 84974 Query: 246 agagtgaggctaatgtgcgtgagatctttgacaagg 281 | |||||| ||||| || || || |||||||||| Sbjct: 84975 aatctgaggccaatgtccgggaaatttttgacaagg 85010 Score = 46.1 bits (23), Expect = 0.078 Identities = 41/47 (87%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggag 58 ||||||||||||| || ||||| |||||||||| ||||| |||||| Sbjct: 84014 gggaagatattggaggcctggaggatgtcaaacgtgagcttcaggag 84060 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 tgtgtactcttctttgatgag 319 ||||||||||||||||||||| Sbjct: 85242 tgtgtactcttctttgatgag 85262
>emb|AL672276.9| Mouse DNA sequence from clone RP23-124L1 on chromosome 4, complete sequence Length = 208030 Score = 143 bits (72), Expect = 4e-31 Identities = 180/216 (83%) Strand = Plus / Minus Query: 66 agtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtg 125 |||| |||||||| |||||||| |||||| || ||||||||| | || |||||||| | Sbjct: 119786 agtatcctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggcg 119727 Query: 126 ttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatg 185 |||| |||||||| |||||||| ||||| |||||||| |||| || || ||||| |||| Sbjct: 119726 ttcttttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaatg 119667 Query: 186 agtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtg 245 | |||||||| ||||||||| |||||||| |||||||||||||||||||||||||| | Sbjct: 119666 aatgccaggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgggg 119607 Query: 246 agagtgaggctaatgtgcgtgagatctttgacaagg 281 | |||||| ||||| || || || |||||||||| Sbjct: 119606 aatctgaggccaatgtccgggaaatttttgacaagg 119571 Score = 46.1 bits (23), Expect = 0.078 Identities = 41/47 (87%) Strand = Plus / Minus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggag 58 ||||||||||||| || ||||| |||||||||| ||||| |||||| Sbjct: 120567 gggaagatattggaggcctggaggatgtcaaacgtgagcttcaggag 120521 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 299 tgtgtactcttctttgatgag 319 ||||||||||||||||||||| Sbjct: 119339 tgtgtactcttctttgatgag 119319
>dbj|AK205742.1| Mus musculus cDNA, clone:Y2G0102K06, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 221 Score = 141 bits (71), Expect = 2e-30 Identities = 152/179 (84%) Strand = Plus / Plus Query: 65 cagtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggt 124 ||||| |||||||| |||||||| |||||| || ||||||||| | || |||||||| Sbjct: 22 cagtatcctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggc 81 Query: 125 gttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaat 184 ||||| |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||| Sbjct: 82 gttcttttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaat 141 Query: 185 gagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 243 || |||||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 142 gaatgccaggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 200
>dbj|AK204815.1| Mus musculus cDNA, clone:Y1G0149L07, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 221 Score = 141 bits (71), Expect = 2e-30 Identities = 152/179 (84%) Strand = Plus / Plus Query: 65 cagtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggt 124 ||||| |||||||| |||||||| |||||| || ||||||||| | || |||||||| Sbjct: 22 cagtatcctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggc 81 Query: 125 gttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaat 184 ||||| |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||| Sbjct: 82 gttcttttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaat 141 Query: 185 gagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 243 || |||||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 142 gaatgccaggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 200
>emb|CR735112.10| Zebrafish DNA sequence from clone CH211-222C11 in linkage group 5, complete sequence Length = 156543 Score = 135 bits (68), Expect = 1e-28 Identities = 179/216 (82%) Strand = Plus / Minus Query: 66 agtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtg 125 ||||||| |||||||||||||| |||||| |||||||||||| | || ||||| |||| Sbjct: 149844 agtacccagtggagcatccagacaaattcctcaagtttggcatgactccatccaagggtg 149785 Query: 126 ttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatg 185 | ||||||||||| || || || |||||||||||| | |||||||||| || || |||| Sbjct: 149784 tgctgttctatggaccaccaggttgtggtaaaacccttctggccaaggccatcgccaatg 149725 Query: 186 agtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtg 245 |||||||||| ||||||||| |||||||| || || ||||| || ||||||||||| | Sbjct: 149724 agtgccaggccaacttcatctcaatcaagggcccagaactgctcactatgtggtttggag 149665 Query: 246 agagtgaggctaatgtgcgtgagatctttgacaagg 281 | ||||| ||||| ||||| ||||||||||||| Sbjct: 149664 aatcagaggcgaatgtccgtgaaatctttgacaagg 149629
>emb|CR318632.9| Zebrafish DNA sequence from clone CH211-113N10 in linkage group 5, complete sequence Length = 143278 Score = 135 bits (68), Expect = 1e-28 Identities = 179/216 (82%) Strand = Plus / Plus Query: 66 agtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtg 125 ||||||| |||||||||||||| |||||| |||||||||||| | || ||||| |||| Sbjct: 132838 agtacccagtggagcatccagacaaattcctcaagtttggcatgactccatccaagggtg 132897 Query: 126 ttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatg 185 | ||||||||||| || || || |||||||||||| | |||||||||| || || |||| Sbjct: 132898 tgctgttctatggaccaccaggttgtggtaaaacccttctggccaaggccatcgccaatg 132957 Query: 186 agtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtg 245 |||||||||| ||||||||| |||||||| || || ||||| || ||||||||||| | Sbjct: 132958 agtgccaggccaacttcatctcaatcaagggcccagaactgctcactatgtggtttggag 133017 Query: 246 agagtgaggctaatgtgcgtgagatctttgacaagg 281 | ||||| ||||| ||||| ||||||||||||| Sbjct: 133018 aatcagaggcgaatgtccgtgaaatctttgacaagg 133053
>dbj|AK215003.1| Mus musculus cDNA, clone:Y2G0133K12, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 221 Score = 135 bits (68), Expect = 1e-28 Identities = 149/176 (84%) Strand = Plus / Plus Query: 65 cagtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggt 124 ||||| |||||||| |||||||| |||||| || ||||||||| | || |||||||| Sbjct: 22 cagtatcctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggc 81 Query: 125 gttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaat 184 ||||| |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||| Sbjct: 82 gttcttttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaat 141 Query: 185 gagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtt 240 || |||||||| ||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 142 gaatgccaggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtt 197
>gb|AC015985.10|ATAC015985 Arabidopsis thaliana chromosome III BAC F8A24 genomic sequence, complete sequence Length = 72902 Score = 133 bits (67), Expect = 4e-28 Identities = 236/291 (81%), Gaps = 1/291 (0%) Strand = Plus / Minus Query: 57 agactgtccagtaccctgtggagcatccagagaaattcgagaagtttggcatgtcccctt 116 ||||||| || ||||| || ||||| |||||||| || ||||| || || ||||| || | Sbjct: 44928 agactgttcaatacccagtcgagcacccagagaagtttgagaaattcgggatgtctccat 44869 Query: 117 ccaaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaa 176 | || || || || ||||| || |||||||||||||| |||||| | |||||||| || | Sbjct: 44868 caaagggagtccttttctacggtcctcctggatgtgggaaaacccttttggccaaagcta 44809 Query: 177 ttgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgt 236 |||| || |||||||| ||||| ||||||||| ||||||| || ||||| || || |||| Sbjct: 44808 ttgccaacgagtgccaagctaatttcatcagtgtcaagggtcccgagcttctgacaatgt 44749 Query: 237 ggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggctagggggtcagcac 296 ||||||| |||||||| || ||||| ||||| ||||| |||||||| | || || | Sbjct: 44748 ggtttggagagagtgaagcaaatgttcgtgaaatcttcgacaaggcccgtcaatccgctc 44689 Query: 297 catgtgtactcttctttgatgagctttgactctattgctacccagagagga 347 ||||||| || ||||||||||||| | ||||| ||||| || ||||||||| Sbjct: 44688 catgtgttcttttctttgatgagc-tcgactccattgcaactcagagagga 44639
>dbj|AK216904.1| Mus musculus cDNA, clone:Y2G0139P13, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 221 Score = 133 bits (67), Expect = 4e-28 Identities = 151/179 (84%) Strand = Plus / Plus Query: 65 cagtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggt 124 ||||| |||||||| |||||||| |||||| || ||||||||| | || |||||||| Sbjct: 22 cagtatcctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggc 81 Query: 125 gttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaat 184 |||| |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||| Sbjct: 82 attcttttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaat 141 Query: 185 gagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 243 || |||||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 142 gaatgccaggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 200
>dbj|AK216170.1| Mus musculus cDNA, clone:Y2G0137H05, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 210 Score = 133 bits (67), Expect = 4e-28 Identities = 151/179 (84%) Strand = Plus / Plus Query: 65 cagtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggt 124 ||||| |||||||| |||||||| |||||| || ||||||||| | || |||||||| Sbjct: 22 cagtatcctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggc 81 Query: 125 gttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaat 184 ||||| |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||| Sbjct: 82 gttcttttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaat 141 Query: 185 gagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 243 || || ||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 142 gaatggcaggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 200
>dbj|AK214913.1| Mus musculus cDNA, clone:Y2G0133G06, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 210 Score = 133 bits (67), Expect = 4e-28 Identities = 151/179 (84%) Strand = Plus / Plus Query: 65 cagtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggt 124 ||||| |||||||| |||||||| |||||| || ||||||||| | || |||||||| Sbjct: 22 cagtatcctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggc 81 Query: 125 gttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaat 184 ||||| |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||| Sbjct: 82 gttcttttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaat 141 Query: 185 gagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 243 || |||||||| ||||||||| |||||||| |||||||||||||||||| ||||||| Sbjct: 142 gaatgccaggccaacttcatctccatcaagggtcctgagctgcttaccatgcggtttgg 200
>dbj|AK198469.1| Mus musculus cDNA, clone:Y1G0128E09, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 221 Score = 133 bits (67), Expect = 4e-28 Identities = 151/179 (84%) Strand = Plus / Plus Query: 65 cagtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggt 124 ||||| |||||||| |||||||| |||||| || ||||||||| | || |||||||| Sbjct: 22 cagtatcctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggc 81 Query: 125 gttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaat 184 || || |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||| Sbjct: 82 gtccttttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaat 141 Query: 185 gagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 243 || |||||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 142 gaatgccaggccaacttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 200
>dbj|AK181023.1| Mus musculus cDNA, clone:Y0G0116K19, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 287 Score = 127 bits (64), Expect = 3e-26 Identities = 152/180 (84%), Gaps = 1/180 (0%) Strand = Plus / Plus Query: 65 cagtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggt 124 ||||| |||||||| |||||||| |||||| || ||||||||| | || |||||||| Sbjct: 87 cagtatcctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggc 146 Query: 125 gttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaat 184 ||||| |||||||| |||||||| ||||| |||||||| |||| || || ||||| ||| Sbjct: 147 gttcttttctatggacctcctggctgtgggaaaaccttactggctaaagccattgctaat 206 Query: 185 gagtgccaggctaacttcatcagtatcaagggacctgag-ctgcttaccatgtggtttgg 243 || |||||||| ||||||||| |||||||| |||||| |||||||||||||||||||| Sbjct: 207 gaatgccaggccaacttcatctccatcaagggtcctgagactgcttaccatgtggtttgg 266
>dbj|AK189172.1| Mus musculus cDNA, clone:Y0G0148B22, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 221 Score = 125 bits (63), Expect = 1e-25 Identities = 150/179 (83%) Strand = Plus / Plus Query: 65 cagtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggt 124 ||||| |||||||| |||||||| |||||| || ||||||||| | || |||||||| Sbjct: 22 cagtatcctgtggaacatccagacaaattcctcaaatttggcatgactccctccaaaggc 81 Query: 125 gttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaat 184 ||||| |||||||| |||||||| ||||| |||||||| ||| || || ||||| ||| Sbjct: 82 gttcttttctatggacctcctggctgtgggaaaaccttactgggtaaagccattgctaat 141 Query: 185 gagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 243 || |||||||| ||||||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 142 gaatgccaggccaacttcatctccatcaagggtcctgagctgcttaccatttggtttgg 200
>gb|AY606032.1| Oncorhynchus mykiss valosin containing protein mRNA, complete cds Length = 2681 Score = 121 bits (61), Expect = 2e-24 Identities = 211/261 (80%) Strand = Plus / Plus Query: 23 ggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtaccctgtggagcat 82 ||||||||||| ||||||| |||| || |||||| ||| |||||||| |||||||| Sbjct: 1281 ggtggtctggaggatgtcaagagggaactccaggagcttgtacagtacccagtggagcac 1340 Query: 83 ccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgttctatggccct 142 ||||| || ||| |||||| |||||| |||| ||||| || || |||||||| || || Sbjct: 1341 ccagacaagttcttgaagttcggcatgaccccatccaagggcgtgctgttctacggaccc 1400 Query: 143 cctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgccaggctaacttc 202 || || || ||||| ||| || |||||||||| || || || ||||||||||| |||||| Sbjct: 1401 ccaggttgcggtaagaccctgctggccaaggccatcgccaacgagtgccaggccaacttc 1460 Query: 203 atcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtgaggctaatgtg 262 ||| ||||| || || ||| |||| ||||||||||| || ||| |||||| ||||| Sbjct: 1461 atctccatcaaagggcccgagttgctcaccatgtggttcggcgagtctgaggccaatgtc 1520 Query: 263 cgtgagatctttgacaaggct 283 || |||||||||||||||||| Sbjct: 1521 cgagagatctttgacaaggct 1541
>dbj|AK186814.1| Mus musculus cDNA, clone:Y0G0138N13, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 222 Score = 119 bits (60), Expect = 6e-24 Identities = 138/164 (84%) Strand = Plus / Plus Query: 80 catccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgttctatggc 139 |||||||| |||||| || ||||||||| | || |||||||| ||||| |||||||| Sbjct: 38 catccagacaaattcctcaaatttggcatgactccctccaaaggcgttcttttctatgga 97 Query: 140 cctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgccaggctaac 199 |||||||| | ||| |||||||| |||| || || ||||| ||||| |||||||| ||| Sbjct: 98 cctcctggctttgggaaaaccttactggctaaagccattgctaatgaatgccaggccaac 157 Query: 200 ttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 243 |||||| |||||||| |||||||||||||||||||||||||| Sbjct: 158 ttcatctccatcaagggtcctgagctgcttaccatgtggtttgg 201
>emb|AJ719285.1| Gallus gallus mRNA for hypothetical protein, clone 1c3 Length = 2934 Score = 109 bits (55), Expect = 6e-21 Identities = 217/271 (80%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 ||||||||||||||||||| ||| |||| || | || || |||||| ||| ||||| | Sbjct: 1579 gggaagatattggtggtctagaagatgtaaagagagaactccaggagcttgtacagtatc 1638 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 |||||||||| ||||| || ||| || ||||||||| | || || ||||| ||||||| Sbjct: 1639 ctgtggagcacccagacaagttcctcaaatttggcatgactccatcaaaaggagttctgt 1698 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| || ||||| |||||||| || | ||||||| || ||||| || || |||| Sbjct: 1699 tctatgggccgcctggctgtggtaagacacttctggccaaagccattgccaacgaatgcc 1758 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| |||||||| |||||||| || || |||| |||||||||||||| ||| | Sbjct: 1759 aggcaaacttcatttccatcaaggggccagaattgctcaccatgtggtttggagagtcag 1818 Query: 252 aggctaatgtgcgtgagatctttgacaaggc 282 | || |||||||| ||||||||||||||||| Sbjct: 1819 aagccaatgtgcgcgagatctttgacaaggc 1849
>dbj|AB195711.1| Gallus gallus vcp mRNA for valosin containing protein, complete cds Length = 2916 Score = 109 bits (55), Expect = 6e-21 Identities = 217/271 (80%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 ||||||||||||||||||| ||| |||| || | || || |||||| ||| ||||| | Sbjct: 1529 gggaagatattggtggtctagaagatgtaaagagagaactccaggagcttgtacagtatc 1588 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 |||||||||| ||||| || ||| || ||||||||| | || || ||||| ||||||| Sbjct: 1589 ctgtggagcacccagacaagttcctcaaatttggcatgactccatcaaaaggagttctgt 1648 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| || ||||| |||||||| || | ||||||| || ||||| || || |||| Sbjct: 1649 tctatgggccgcctggctgtggtaagacacttctggccaaagccattgccaacgaatgcc 1708 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| |||||||| |||||||| || || |||| |||||||||||||| ||| | Sbjct: 1709 aggcaaacttcatttccatcaaggggccagaattgctcaccatgtggtttggagagtcag 1768 Query: 252 aggctaatgtgcgtgagatctttgacaaggc 282 | || |||||||| ||||||||||||||||| Sbjct: 1769 aagccaatgtgcgcgagatctttgacaaggc 1799
>emb|BX933202.2| Gallus gallus finished cDNA, clone ChEST509h23 Length = 755 Score = 109 bits (55), Expect = 6e-21 Identities = 217/271 (80%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 |||||||||||||||| || ||| |||| || | || || |||||| ||| ||||| | Sbjct: 483 gggaagatattggtggcctagaagatgtaaagagagaactccaggagcttgtacagtatc 542 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 |||||||||| ||||| || ||| || ||||| ||| |||| || ||||| ||||||| Sbjct: 543 ctgtggagcacccagacaagttcctaaaatttggtatgaccccatcaaaaggggttctgt 602 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 | ||||| || |||| |||||||| || | ||||||| || ||||| ||||| |||| Sbjct: 603 tttatgggccaactggttgtggtaagacacttctggccaaagccattgccaatgaatgcc 662 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| |||||||| ||||||||||| || ||||||||||||||||||| || || Sbjct: 663 aggcaaacttcatttccatcaagggaccagaattgcttaccatgtggtttggagaatctg 722 Query: 252 aggctaatgtgcgtgagatctttgacaaggc 282 | || |||||||| ||||||||||||||||| Sbjct: 723 aagccaatgtgcgcgagatctttgacaaggc 753
>gb|BC046949.1| Xenopus laevis valosin containing protein, mRNA (cDNA clone MGC:52611 IMAGE:5571505), complete cds Length = 3148 Score = 101 bits (51), Expect = 2e-18 Identities = 243/307 (79%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 |||| |||||||||||| ||||| | ||||| ||||||| |||||| || ||||| | Sbjct: 1578 gggaggatattggtggtttggaagacgtcaagagggagctccaggagctggttcagtatc 1637 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 |||||||||||||||| || ||| |||||| || ||| | || || || ||||| || | Sbjct: 1638 ctgtggagcatccagacaagttcctgaagttcggaatgactccatcaaagggtgtcctat 1697 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| || ||||| |||||||| || ||| |||| ||||| ||||| || || |||| Sbjct: 1698 tctatggtccacctggttgtggtaagactttgctggctaaggccattgccaacgaatgcc 1757 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| ||||||||| ||||| || || || || || || ||||||||||| ||| || Sbjct: 1758 aggccaacttcatctccatcaaagggcccgaacttctcactatgtggtttggagagtctg 1817 Query: 252 aggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttct 311 |||| || || || ||||| ||||| |||||| || | | || || ||||| ||||||| Sbjct: 1818 aggccaacgtccgagagatatttgataaggctcggcaggctgctccctgtgtcctcttct 1877 Query: 312 ttgatga 318 ||||||| Sbjct: 1878 ttgatga 1884
>ref|XM_567564.1| Cryptococcus neoformans var. neoformans JEC21 MMS2 (CNJ02750) partial mRNA Length = 2673 Score = 97.6 bits (49), Expect = 2e-17 Identities = 178/221 (80%) Strand = Plus / Plus Query: 20 attggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtaccctgtggag 79 ||||||||| |||| || || ||| |||| || |||||||||||||||| |||||| ||| Sbjct: 1555 attggtggtttggacaaggttaaaagggaactccaggagactgtccagttccctgtcgag 1614 Query: 80 catccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgttctatggc 139 ||||| ||||| ||| |||| |||||||| || || || |||||||| ||||| || Sbjct: 1615 catcctgagaagttcctcaagtacggcatgtctccatcaaagggtgttctcttctacggt 1674 Query: 140 cctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgccaggctaac 199 |||||||| |||||||| |||||||| ||||| || || ||||| || || || ||| Sbjct: 1675 cctcctggtaccggtaaaacgttgttggctaaggctatcgccaatgaatgtcaagcgaac 1734 Query: 200 ttcatcagtatcaagggacctgagctgcttaccatgtggtt 240 |||||| |||||| || |||||||| | ||||||||||| Sbjct: 1735 ttcatctctatcaaaggtcctgagcttttgaccatgtggtt 1775
>emb|X54240.1|XLP9715S X.laevis mRNA for p97 subunit of 15S Mg(2+)-ATPase Length = 3286 Score = 93.7 bits (47), Expect = 4e-16 Identities = 242/307 (78%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 |||| |||||||| ||| ||||| | ||||| ||||||| |||||| || ||||| | Sbjct: 1727 gggaggatattgggggtttggaagacgtcaagagggagctccaggagctggttcagtatc 1786 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 |||||||||||||||| || ||| |||||| || ||| | || || || ||||| || | Sbjct: 1787 ctgtggagcatccagacaagttcctgaagttcggaatgactccatcaaagggtgtcctat 1846 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| || ||||| |||||||| || ||| |||| ||||| ||||| || || |||| Sbjct: 1847 tctatggtccacctggttgtggtaagactttgctggctaaggccattgccaacgaatgcc 1906 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| ||||||||| ||||| || || || || || || ||||||||||| ||| || Sbjct: 1907 aggccaacttcatctccatcaaagggcccgaacttctcactatgtggtttggagagtctg 1966 Query: 252 aggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttct 311 |||| || || || ||||| ||||| |||||| || | | || || ||||| ||||||| Sbjct: 1967 aggccaacgtccgagagatatttgataaggctcggcaggctgctccctgtgtcctcttct 2026 Query: 312 ttgatga 318 ||||||| Sbjct: 2027 ttgatga 2033
>ref|XM_428317.1| PREDICTED: Gallus gallus similar to valosin precursor (LOC430766), partial mRNA Length = 1516 Score = 89.7 bits (45), Expect = 6e-15 Identities = 129/157 (82%) Strand = Plus / Plus Query: 165 tggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagc 224 ||||||| || ||||| ||||| |||||||| |||||||| ||||||||||| || Sbjct: 679 tggccaaagccattgccaatgaatgccaggcaaacttcatttccatcaagggaccagaat 738 Query: 225 tgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggcta 284 ||||||||||||||||||| || ||| || |||||||| ||||||||||||||||| Sbjct: 739 tgcttaccatgtggtttggagaatctgaagccaatgtgcgcgagatctttgacaaggccc 798 Query: 285 gggggtcagcaccatgtgtactcttctttgatgagct 321 | |||| || ||||||||||||||||||||||| Sbjct: 799 gccaagcagccccttgtgtactcttctttgatgagct 835
>dbj|AK113049.1| Ciona intestinalis cDNA, clone:ciad002b13, full insert sequence Length = 2972 Score = 85.7 bits (43), Expect = 9e-14 Identities = 163/203 (80%) Strand = Plus / Plus Query: 65 cagtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggt 124 ||||||||||| |||||||||||||| ||| |||||||| ||| | || ||||| ||| Sbjct: 1574 cagtaccctgttgagcatccagagaagttccttaagtttggtatgacaccatccaagggt 1633 Query: 125 gttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaat 184 || |||||||||| || || || |||||||||||| | | ||||| || ||||| || Sbjct: 1634 gtgttgttctatgggccaccaggttgtggtaaaaccctccttgccaaagctattgccaac 1693 Query: 185 gagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggt 244 ||||| || || || |||||| |||||||| || ||| || | ||||||||||||||| Sbjct: 1694 gagtgtcaagccaatttcatctccatcaagggtcccgagatgttgaccatgtggtttggt 1753 Query: 245 gagagtgaggctaatgtgcgtga 267 || |||||||||||| ||||| Sbjct: 1754 gaatctgaggctaatgtccgtga 1776
>ref|XM_424984.1| PREDICTED: Gallus gallus similar to valosin precursor (LOC427410), mRNA Length = 2303 Score = 83.8 bits (42), Expect = 4e-13 Identities = 147/182 (80%) Strand = Plus / Plus Query: 101 tttggcatgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaaaacc 160 ||||||||| | || || ||||| |||||||||||||| || ||||| |||||||| || Sbjct: 1554 tttggcatgactccatcaaaaggagttctgttctatgggccgcctggctgtggtaagaca 1613 Query: 161 ttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacct 220 | ||||||| || ||||| || || |||||||| |||||||| |||||||| || Sbjct: 1614 cttctggccaaagccattgccaacgaatgccaggcaaacttcatttccatcaaggggcca 1673 Query: 221 gagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaag 280 || |||| |||||||||||||| ||| || || |||||||| ||||||||||||||| Sbjct: 1674 gaattgctcaccatgtggtttggagagtcagaagccaatgtgcgcgagatctttgacaag 1733 Query: 281 gc 282 || Sbjct: 1734 gc 1735 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgt 39 ||||||||||||||||||| ||| |||| Sbjct: 1489 gggaagatattggtggtctagaagatgt 1516
>gb|DQ145270.1| Drosophila miranda neo-X TER94 gene, partial sequence Length = 1221 Score = 79.8 bits (40), Expect = 6e-12 Identities = 124/152 (81%) Strand = Plus / Plus Query: 131 ttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgc 190 ||||||||||| || || || ||||| || || |||||||||| ||||| || |||||| Sbjct: 607 ttctatggcccgcccggttgcggtaagactctgctggccaaggccattgccaacgagtgc 666 Query: 191 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 250 ||||| ||||||||| ||||||| || |||||||| ||||||||||| || ||| | Sbjct: 667 caggcaaacttcatctccgtcaaggggcccgagctgctgaccatgtggttcggcgagtct 726 Query: 251 gaggctaatgtgcgtgagatctttgacaaggc 282 ||||| || ||||| || ||||| |||||||| Sbjct: 727 gaggccaacgtgcgcgacatcttcgacaaggc 758 Score = 40.1 bits (20), Expect = 4.8 Identities = 53/64 (82%) Strand = Plus / Plus Query: 46 ggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaagtttgg 105 ||||||||||||| ||||||||||| || |||||||| || || ||| |||||||| Sbjct: 522 ggagctgcaggagctggtccagtacccagtcgagcatcccgacaagttcctcaagtttgg 581 Query: 106 catg 109 |||| Sbjct: 582 catg 585
>ref|XM_774925.1| PREDICTED: Strongylocentrotus purpuratus similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 1 (LOC575609), mRNA Length = 3597 Score = 79.8 bits (40), Expect = 6e-12 Identities = 142/176 (80%) Strand = Plus / Plus Query: 65 cagtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggt 124 ||||||||||||||||||||||| || ||| ||||| |||||| |||| | || Sbjct: 1309 cagtaccctgtggagcatccagacaagttcctcaagttcggcatgaccccgagccgtggc 1368 Query: 125 gttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaat 184 || || ||||| || || || ||||||||||| ||| || | |||||||| || || || Sbjct: 1369 gtgctcttctacggtcccccaggatgtggtaagaccctgctcgccaaggccatcgccaac 1428 Query: 185 gagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtt 240 ||||||||||| ||||||||| ||||||||| || |||||||| ||||||||||| Sbjct: 1429 gagtgccaggccaacttcatctctatcaagggtccggagctgctcaccatgtggtt 1484
>ref|XM_796615.1| PREDICTED: Strongylocentrotus purpuratus similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 2 (LOC575609), mRNA Length = 3621 Score = 79.8 bits (40), Expect = 6e-12 Identities = 142/176 (80%) Strand = Plus / Plus Query: 65 cagtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggt 124 ||||||||||||||||||||||| || ||| ||||| |||||| |||| | || Sbjct: 1309 cagtaccctgtggagcatccagacaagttcctcaagttcggcatgaccccgagccgtggc 1368 Query: 125 gttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaat 184 || || ||||| || || || ||||||||||| ||| || | |||||||| || || || Sbjct: 1369 gtgctcttctacggtcccccaggatgtggtaagaccctgctcgccaaggccatcgccaac 1428 Query: 185 gagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtt 240 ||||||||||| ||||||||| ||||||||| || |||||||| ||||||||||| Sbjct: 1429 gagtgccaggccaacttcatctctatcaagggtccggagctgctcaccatgtggtt 1484
>dbj|AK109969.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-159-C04, full insert sequence Length = 3464 Score = 79.8 bits (40), Expect = 6e-12 Identities = 181/228 (79%) Strand = Plus / Plus Query: 20 attggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtaccctgtggag 79 ||||||||||| || || ||||| | |||||| |||||||| ||| |||||| || ||| Sbjct: 2330 attggtggtctcgagaaggtcaagcaggagctccaggagaccgtctcgtaccccgtcgag 2389 Query: 80 catccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgttctatggc 139 ||||| || || ||| |||| |||||| | ||||| || ||||| || ||||| || Sbjct: 2390 catcccgaaaagttcctcaagtacggcatggcgccttcgaagggtgtcctcttctacggt 2449 Query: 140 cctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgccaggctaac 199 || ||||| |||||| || || |||||||||| || || || ||||||||||| ||| Sbjct: 2450 ccccctggtactggtaagacgctgctggccaaggcgatcgccaacgagtgccaggccaac 2509 Query: 200 ttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgag 247 |||||| |||||||| || |||||||| ||||||||||| |||||| Sbjct: 2510 ttcatctcgatcaagggtcccgagctgctcaccatgtggttcggtgag 2557
>gb|AE017350.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 10, complete sequence Length = 1085720 Score = 77.8 bits (39), Expect = 2e-11 Identities = 126/155 (81%) Strand = Plus / Plus Query: 20 attggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtaccctgtggag 79 ||||||||| |||| || || ||| |||| || |||||||||||||||| |||||| ||| Sbjct: 795097 attggtggtttggacaaggttaaaagggaactccaggagactgtccagttccctgtcgag 795156 Query: 80 catccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgttctatggc 139 ||||| ||||| ||| |||| |||||||| || || || |||||||| ||||| || Sbjct: 795157 catcctgagaagttcctcaagtacggcatgtctccatcaaagggtgttctcttctacggt 795216 Query: 140 cctcctggatgtggtaaaaccttgttggccaaggc 174 |||||||| |||||||| |||||||| ||||| Sbjct: 795217 cctcctggtaccggtaaaacgttgttggctaaggc 795251
>ref|XM_482385.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2547 Score = 75.8 bits (38), Expect = 9e-11 Identities = 77/90 (85%) Strand = Plus / Plus Query: 165 tggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagc 224 |||||||||| || || || |||||| |||| ||||||||||| |||||||| || |||| Sbjct: 1616 tggccaaggccatcgccaaggagtgcaaggccaacttcatcagcatcaaggggcccgagc 1675 Query: 225 tgcttaccatgtggtttggtgagagtgagg 254 |||| ||||||||||| || ||||| |||| Sbjct: 1676 tgctcaccatgtggttcggcgagagcgagg 1705
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 75.8 bits (38), Expect = 9e-11 Identities = 77/90 (85%) Strand = Plus / Minus Query: 165 tggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagc 224 |||||||||| || || || |||||| |||| ||||||||||| |||||||| || |||| Sbjct: 19750766 tggccaaggccatcgccaaggagtgcaaggccaacttcatcagcatcaaggggcccgagc 19750707 Query: 225 tgcttaccatgtggtttggtgagagtgagg 254 |||| ||||||||||| || ||||| |||| Sbjct: 19750706 tgctcaccatgtggttcggcgagagcgagg 19750677
>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0007M04 Length = 176293 Score = 75.8 bits (38), Expect = 9e-11 Identities = 77/90 (85%) Strand = Plus / Minus Query: 165 tggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagc 224 |||||||||| || || || |||||| |||| ||||||||||| |||||||| || |||| Sbjct: 79717 tggccaaggccatcgccaaggagtgcaaggccaacttcatcagcatcaaggggcccgagc 79658 Query: 225 tgcttaccatgtggtttggtgagagtgagg 254 |||| ||||||||||| || ||||| |||| Sbjct: 79657 tgctcaccatgtggttcggcgagagcgagg 79628
>gb|AY190939.1| Drosophila erecta clone DERF01_42_I03 (D1420) genomic sequence Length = 45909 Score = 73.8 bits (37), Expect = 3e-10 Identities = 100/121 (82%) Strand = Plus / Plus Query: 162 tgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctg 221 ||||||||||||| ||||| || ||||||||||| ||||||||| ||||||| || | Sbjct: 38371 tgttggccaaggccattgccaacgagtgccaggcgaacttcatctcagtcaagggtcccg 38430 Query: 222 agctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaagg 281 ||||||| ||||||||||| || ||| ||||| |||||||| || ||||| || |||| Sbjct: 38431 agctgctgaccatgtggttcggcgagtccgaggccaatgtgcgcgacatcttcgataagg 38490 Query: 282 c 282 | Sbjct: 38491 c 38491
>gb|BC074716.1| Xenopus tropicalis valosin-containing protein, mRNA (cDNA clone MGC:69484 IMAGE:5336248), complete cds Length = 3258 Score = 69.9 bits (35), Expect = 5e-09 Identities = 239/307 (77%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 |||| ||||| ||||| ||||| | ||||| ||||||| |||||| || ||||| | Sbjct: 1540 gggaggatatcggtggcttggaagacgtcaagagggagctccaggagctggtgcagtatc 1599 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 |||||||||||||||| || ||| |||||| || ||| |||| || || ||||| || | Sbjct: 1600 ctgtggagcatccagacaagttcctgaagttcggaatgaccccatcgaagggtgtgcttt 1659 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 |||| || || || || || ||||| || || |||| ||||| ||||| || || |||| Sbjct: 1660 tctacgggccccccgggtgcggtaagactctgctggctaaggccattgccaacgaatgcc 1719 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| ||||||||| ||||| || || || ||||| ||||||||||| || ||| || Sbjct: 1720 aggccaacttcatctccatcaaagggccagaactgctcaccatgtggttcggagagtctg 1779 Query: 252 aggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttct 311 |||| || || | ||||| |||||||||||| || | | || || ||||| ||||||| Sbjct: 1780 aggccaacgtcagagagatatttgacaaggctcggcaggccgctccttgtgtcctcttct 1839 Query: 312 ttgatga 318 ||||||| Sbjct: 1840 ttgatga 1846
>gb|DQ443348.1| Bombyx mori transitional endoplasmic reticulum ATPase TER94 mRNA, complete cds Length = 2760 Score = 69.9 bits (35), Expect = 5e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 122 ggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgca 181 |||||||| ||||| || |||||||| ||||||||||| ||| |||| ||||| || || Sbjct: 1644 ggtgttctcttctacggacctcctggttgtggtaaaactttgctggcaaaggccatcgcc 1703 Query: 182 aatgagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtt 240 || ||||| ||||||||||| || | |||||||| |||||||| ||||||||||| Sbjct: 1704 aacgagtgtcaggctaactttatatcagtgaagggaccagagctgctcaccatgtggtt 1762
>ref|NM_001005677.1| Xenopus tropicalis valosin-containing protein (vcp), mRNA Length = 3258 Score = 69.9 bits (35), Expect = 5e-09 Identities = 239/307 (77%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 |||| ||||| ||||| ||||| | ||||| ||||||| |||||| || ||||| | Sbjct: 1540 gggaggatatcggtggcttggaagacgtcaagagggagctccaggagctggtgcagtatc 1599 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 |||||||||||||||| || ||| |||||| || ||| |||| || || ||||| || | Sbjct: 1600 ctgtggagcatccagacaagttcctgaagttcggaatgaccccatcgaagggtgtgcttt 1659 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 |||| || || || || || ||||| || || |||| ||||| ||||| || || |||| Sbjct: 1660 tctacgggccccccgggtgcggtaagactctgctggctaaggccattgccaacgaatgcc 1719 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagtg 251 |||| ||||||||| ||||| || || || ||||| ||||||||||| || ||| || Sbjct: 1720 aggccaacttcatctccatcaaagggccagaactgctcaccatgtggttcggagagtctg 1779 Query: 252 aggctaatgtgcgtgagatctttgacaaggctagggggtcagcaccatgtgtactcttct 311 |||| || || | ||||| |||||||||||| || | | || || ||||| ||||||| Sbjct: 1780 aggccaacgtcagagagatatttgacaaggctcggcaggccgctccttgtgtcctcttct 1839 Query: 312 ttgatga 318 ||||||| Sbjct: 1840 ttgatga 1846
>dbj|AB244027.1| Bombyx mori ter94 mRNA for transitional endoplasmic reticulum ATPase TER94, complete cds Length = 2721 Score = 69.9 bits (35), Expect = 5e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 122 ggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgca 181 |||||||| ||||| || |||||||| ||||||||||| ||| |||| ||||| || || Sbjct: 1619 ggtgttctcttctacggacctcctggttgtggtaaaactttgctggcaaaggccatcgcc 1678 Query: 182 aatgagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtt 240 || ||||| ||||||||||| || | |||||||| |||||||| ||||||||||| Sbjct: 1679 aacgagtgtcaggctaactttatatcagtgaagggaccagagctgctcaccatgtggtt 1737
>gb|AF047037.1|AF047037 Drosophila melanogaster transitional endoplasmic reticulum ATPase TER94 mRNA, complete cds Length = 2550 Score = 69.9 bits (35), Expect = 5e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 165 tggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagc 224 |||||||||| ||||| || ||||||||||| ||||||||| ||||||| || |||| Sbjct: 1638 tggccaaggccattgccaacgagtgccaggcgaacttcatctcagtcaagggtcccgagc 1697 Query: 225 tgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggct 283 |||| ||||||||||| || ||| |||||| || ||||| || ||||| || |||||| Sbjct: 1698 tgctgaccatgtggttcggcgagtctgaggccaacgtgcgcgacatcttcgataaggct 1756
>gb|AF132553.1| Drosophila melanogaster BcDNA.GM02885 (BcDNA.GM02885) mRNA, complete cds Length = 3018 Score = 69.9 bits (35), Expect = 5e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 165 tggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagc 224 |||||||||| ||||| || ||||||||||| ||||||||| ||||||| || |||| Sbjct: 1681 tggccaaggccattgccaacgagtgccaggcgaacttcatctcagtcaagggtcccgagc 1740 Query: 225 tgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggct 283 |||| ||||||||||| || ||| |||||| || ||||| || ||||| || |||||| Sbjct: 1741 tgctgaccatgtggttcggcgagtctgaggccaacgtgcgcgacatcttcgataaggct 1799
>dbj|AB181225.1| Eisenia fetida evcp-1 mRNA for valosin containing protein-1, complete cds Length = 2932 Score = 67.9 bits (34), Expect = 2e-08 Identities = 156/194 (80%), Gaps = 2/194 (1%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 |||||||| |||| ||||||||||||||||||||||| ||||| || ||| || |||| Sbjct: 1536 gggaagatgttggcggtctggaaaatgtcaaacgggaactgcaagaacttgtgcaatacc 1595 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 | || ||||||||||| || ||| ||| ||||| ||| | || || || || || ||| Sbjct: 1596 cggtagagcatccagacaagttcctgaaatttggaatgactccgtcaaagggggtgttgt 1655 Query: 132 tctatggccctcctggatgtggtaaaac-cttgttggccaaggcaattgcaaatgagtgc 190 |||| || || || || || || ||||| ||| || |||||||| |||||||| |||||| Sbjct: 1656 tctacggacccccaggttgcggcaaaacgcttctt-gccaaggccattgcaaacgagtgc 1714 Query: 191 caggctaacttcat 204 ||||| |||||||| Sbjct: 1715 caggccaacttcat 1728
>gb|DQ145271.1| Drosophila miranda neo-Y TER94 gene, partial sequence Length = 1221 Score = 60.0 bits (30), Expect = 5e-06 Identities = 96/118 (81%) Strand = Plus / Plus Query: 165 tggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagc 224 |||||||||| || || || ||||||||||| ||||||||| ||||||| || |||| Sbjct: 641 tggccaaggccatcgccaacgagtgccaggcaaacttcatctccgtcaaggggcccgagc 700 Query: 225 tgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggc 282 |||| ||||||||||| || ||| ||| || || ||||| || ||||| |||||||| Sbjct: 701 tgctgaccatgtggttcggcgagtctgaagccaacgtgcgcgacatcttcgacaaggc 758 Score = 40.1 bits (20), Expect = 4.8 Identities = 53/64 (82%) Strand = Plus / Plus Query: 46 ggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaagtttgg 105 ||||||||||||| ||||||||||| || |||||||| || || ||| |||||||| Sbjct: 522 ggagctgcaggagctggtccagtacccagtcgagcatcccgacaagttcctcaagtttgg 581 Query: 106 catg 109 |||| Sbjct: 582 catg 585
>ref|XM_752110.1| Ustilago maydis 521 hypothetical protein (UM01056.1) partial mRNA Length = 2469 Score = 60.0 bits (30), Expect = 5e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 167 gccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctg 226 |||||||| ||||| || |||||||| || ||||| || |||||||| ||||||||| Sbjct: 1579 gccaaggctattgccaacgagtgccaagccaactttatttcgatcaagggtcctgagctg 1638 Query: 227 cttaccatgtggtttggtgagagtgaggctaatgtgcg 264 || ||||||||||| |||||| |||||||| ||||| Sbjct: 1639 ctcaccatgtggttcggtgagtcggaggctaacgtgcg 1676
>ref|XM_385706.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05530.1) partial mRNA Length = 2466 Score = 60.0 bits (30), Expect = 5e-06 Identities = 147/186 (79%) Strand = Plus / Plus Query: 62 gtccagtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaa 121 |||||||||||||| || || || ||||| | | ||||| |||||||| |||||| | Sbjct: 1534 gtccagtaccctgtcgatcaccccgagaagtacctcaagttcggcatgtctccttcccga 1593 Query: 122 ggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgca 181 ||||| ||||||| ||| |||||||| ||||||||| ||||||||||||| | || Sbjct: 1594 ggtgtgctgttctttggtcctcctggtactggtaaaactatgttggccaaggccgtcgcc 1653 Query: 182 aatgagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggttt 241 || ||||| || ||||||||| ||||||||||||| || || | |||||||||| Sbjct: 1654 aacgagtgtgctgccaacttcatctccgtcaagggacctgaactcctcagcatgtggttt 1713 Query: 242 ggtgag 247 |||||| Sbjct: 1714 ggtgag 1719
>ref|NM_165726.1| Drosophila melanogaster TER94 CG2331-RB, transcript variant B (TER94), mRNA Length = 1458 Score = 60.0 bits (30), Expect = 5e-06 Identities = 96/118 (81%) Strand = Plus / Plus Query: 165 tggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagc 224 |||||||||| ||||| || ||||||||||| ||||||||| ||||||| || || | Sbjct: 133 tggccaaggccattgccaacgagtgccaggcgaacttcatctcagtcaagggtcccgaac 192 Query: 225 tgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggc 282 |||| ||||||||||| || ||| |||||| || ||||| || ||||| || ||||| Sbjct: 193 tgctgaccatgtggttcggcgagtctgaggccaacgtgcgcgacatcttcgataaggc 250
>ref|NM_058021.3| Drosophila melanogaster TER94 CG2331-RA, transcript variant A (TER94), mRNA Length = 3018 Score = 60.0 bits (30), Expect = 5e-06 Identities = 96/118 (81%) Strand = Plus / Plus Query: 165 tggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagc 224 |||||||||| ||||| || ||||||||||| ||||||||| ||||||| || || | Sbjct: 1697 tggccaaggccattgccaacgagtgccaggcgaacttcatctcagtcaagggtcccgaac 1756 Query: 225 tgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggc 282 |||| ||||||||||| || ||| |||||| || ||||| || ||||| || ||||| Sbjct: 1757 tgctgaccatgtggttcggcgagtctgaggccaacgtgcgcgacatcttcgataaggc 1814
>gb|AC007414.6| Drosophila melanogaster, chromosome 2R, region 46C-46D, BAC clone BACR06J01, complete sequence Length = 172904 Score = 60.0 bits (30), Expect = 5e-06 Identities = 96/118 (81%) Strand = Plus / Plus Query: 165 tggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagc 224 |||||||||| ||||| || ||||||||||| ||||||||| ||||||| || || | Sbjct: 46953 tggccaaggccattgccaacgagtgccaggcgaacttcatctcagtcaagggtcccgaac 47012 Query: 225 tgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggc 282 |||| ||||||||||| || ||| |||||| || ||||| || ||||| || ||||| Sbjct: 47013 tgctgaccatgtggttcggcgagtctgaggccaacgtgcgcgacatcttcgataaggc 47070
>gb|AC007413.5|AC007413 Drosophila melanogaster, chromosome 2R, region 46C-46D, BAC clone BACR01L01, complete sequence Length = 160301 Score = 60.0 bits (30), Expect = 5e-06 Identities = 96/118 (81%) Strand = Plus / Plus Query: 165 tggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagc 224 |||||||||| ||||| || ||||||||||| ||||||||| ||||||| || || | Sbjct: 158400 tggccaaggccattgccaacgagtgccaggcgaacttcatctcagtcaagggtcccgaac 158459 Query: 225 tgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggc 282 |||| ||||||||||| || ||| |||||| || ||||| || ||||| || ||||| Sbjct: 158460 tgctgaccatgtggttcggcgagtctgaggccaacgtgcgcgacatcttcgataaggc 158517
>gb|AE003831.3| Drosophila melanogaster chromosome 2R, section 19 of 73 of the complete sequence Length = 275390 Score = 60.0 bits (30), Expect = 5e-06 Identities = 96/118 (81%) Strand = Plus / Plus Query: 165 tggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagc 224 |||||||||| ||||| || ||||||||||| ||||||||| ||||||| || || | Sbjct: 144246 tggccaaggccattgccaacgagtgccaggcgaacttcatctcagtcaagggtcccgaac 144305 Query: 225 tgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggc 282 |||| ||||||||||| || ||| |||||| || ||||| || ||||| || ||||| Sbjct: 144306 tgctgaccatgtggttcggcgagtctgaggccaacgtgcgcgacatcttcgataaggc 144363
>gb|BT001521.1| Drosophila melanogaster LP12034 full insert cDNA Length = 1473 Score = 60.0 bits (30), Expect = 5e-06 Identities = 96/118 (81%) Strand = Plus / Plus Query: 165 tggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagc 224 |||||||||| ||||| || ||||||||||| ||||||||| ||||||| || || | Sbjct: 134 tggccaaggccattgccaacgagtgccaggcgaacttcatctcagtcaagggtcccgaac 193 Query: 225 tgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggc 282 |||| ||||||||||| || ||| |||||| || ||||| || ||||| || ||||| Sbjct: 194 tgctgaccatgtggttcggcgagtctgaggccaacgtgcgcgacatcttcgataaggc 251
>emb|Z48334.1|CEF10B5 Caenorhabditis elegans Cosmid F10B5, complete sequence Length = 29132 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 176 attgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatg 235 ||||| ||||| ||||||||||||||||| ||||||||||| ||||| ||||| ||| Sbjct: 1139 attgccaatgaatgccaggctaacttcatttccatcaagggacccgagcttcttactatg 1198 Query: 236 tggtt 240 ||||| Sbjct: 1199 tggtt 1203
>ref|NM_063304.2| Caenorhabditis elegans Cell Division Cycle related family member (cdc-48.2) (cdc-48.2) mRNA, complete cds Length = 2632 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 176 attgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatg 235 ||||| ||||| ||||||||||||||||| ||||||||||| ||||| ||||| ||| Sbjct: 1695 attgccaatgaatgccaggctaacttcatttccatcaagggacccgagcttcttactatg 1754 Query: 236 tggtt 240 ||||| Sbjct: 1755 tggtt 1759
>gb|AY973543.1| Hyaloperonospora parasitica isolate Emoy2 clone BAC 9B13 and BAC 4C4, complete sequence Length = 120624 Score = 58.0 bits (29), Expect = 2e-05 Identities = 101/125 (80%) Strand = Plus / Plus Query: 122 ggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgca 181 ||||| ||||| || || || |||||||| || ||||| | ||||||||||| |||| Sbjct: 44708 ggtgtgctgttttacggtccacctggatgcggcaaaacgcttttggccaaggctgttgct 44767 Query: 182 aatgagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggttt 241 || || |||||||| ||||| ||| |||||||| || |||||| | |||||||||||| Sbjct: 44768 aacgaatgccaggcgaactttatctcaatcaagggtcccgagctgttgaccatgtggttt 44827 Query: 242 ggtga 246 ||||| Sbjct: 44828 ggtga 44832
>ref|XM_747195.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g09210) partial mRNA Length = 2355 Score = 56.0 bits (28), Expect = 8e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 197 aacttcatcagtatcaagggacctgagctgct 228 |||||||||||| ||||||||||||||||||| Sbjct: 1753 aacttcatcagtgtcaagggacctgagctgct 1784
>ref|XM_315644.2| Anopheles gambiae str. PEST ENSANGP00000022801 (ENSANGG00000019258), partial mRNA Length = 2559 Score = 56.0 bits (28), Expect = 8e-05 Identities = 94/116 (81%) Strand = Plus / Plus Query: 167 gccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctg 226 |||||||| || || || ||||||||||| ||||||||| ||||||| || |||||| Sbjct: 1573 gccaaggccatcgccaacgagtgccaggcgaacttcatctcggtcaagggcccggagctg 1632 Query: 227 cttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggc 282 || ||||||||||| || ||| ||||| || ||||| || ||||| |||||||| Sbjct: 1633 ctgaccatgtggttcggcgagtcggaggcgaacgtgcgcgacatcttcgacaaggc 1688
>ref|XM_454038.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E02002g predicted mRNA Length = 3003 Score = 54.0 bits (27), Expect = 3e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 126 ttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgc 180 |||| |||||||| |||||||| ||||||||||||||| || ||||||||||| Sbjct: 2213 ttcttttctatggacctcctgggactggtaaaaccttgttagcgaaggcaattgc 2267
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 54.0 bits (27), Expect = 3e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 126 ttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgc 180 |||| |||||||| |||||||| ||||||||||||||| || ||||||||||| Sbjct: 188604 ttcttttctatggacctcctgggactggtaaaaccttgttagcgaaggcaattgc 188550
>gb|AF202034.1| Drosophila melanogaster endoplasmic reticulum membrane fusion protein (TER94) mRNA, complete cds Length = 2998 Score = 54.0 bits (27), Expect = 3e-04 Identities = 87/107 (81%) Strand = Plus / Plus Query: 167 gccaaggcaattgcaaatgagtgccaggctaacttcatcagtatcaagggacctgagctg 226 |||||||| ||||| || ||||||||||| ||||||||| ||||||| || || ||| Sbjct: 1673 gccaaggccattgccaacgagtgccaggcgaacttcatctcagtcaagggtcccgaactg 1732 Query: 227 cttaccatgtggtttggtgagagtgaggctaatgtgcgtgagatctt 273 || ||||||||||| || ||| |||||| || ||||| || ||||| Sbjct: 1733 ctgaccatgtggttcggcgagtctgaggccaacgtgcgcgacatctt 1779
>emb|CT033065.1| Platynereis dumerilii EST IB0AAA27BE08EM1 Length = 895 Score = 54.0 bits (27), Expect = 3e-04 Identities = 93/115 (80%) Strand = Plus / Plus Query: 129 tgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagt 188 ||||||| ||||| ||||| |||||||| ||| | || |||||||| || || || |||| Sbjct: 498 tgttctacggcccccctggttgtggtaagaccctcttagccaaggccatcgccaacgagt 557 Query: 189 gccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttgg 243 | || || || |||||| |||||||| |||||||| | |||||||||||||| Sbjct: 558 gtcaagccaatttcatctccatcaagggccctgagctcttgaccatgtggtttgg 612
>ref|XM_675431.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN7254.2), mRNA Length = 2484 Score = 52.0 bits (26), Expect = 0.001 Identities = 71/86 (82%) Strand = Plus / Plus Query: 62 gtccagtaccctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaa 121 |||||||||||||| || ||||| ||||| ||| ||||||| || |||| ||||| Sbjct: 1555 gtccagtaccctgtcgatcatcccgagaagttccagaagttcggtctgtcaccttctcgc 1614 Query: 122 ggtgttctgttctatggccctcctgg 147 |||||| |||||||||| |||||||| Sbjct: 1615 ggtgttttgttctatggtcctcctgg 1640
>ref|XM_662183.1| Cryptosporidium hominis TU502 cell division cycle protein 48 (Chro.10043) partial mRNA Length = 2445 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 210 tcaagggacctgagctgcttaccatgtggtttggtgagagtgaggc 255 |||| ||||| ||||| |||||| | |||||||||||||||||||| Sbjct: 1667 tcaaaggacccgagcttcttaccttatggtttggtgagagtgaggc 1712
>ref|XM_780555.1| PREDICTED: Strongylocentrotus purpuratus similar to Nuclear valosin-containing protein-like (Nuclear VCP-like protein) (NVLp) (LOC580502), mRNA Length = 2313 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 294 caccatgtgtactcttctttgatgagctt 322 ||||||||||| ||||||||||||||||| Sbjct: 1970 caccatgtgtaatcttctttgatgagctt 1998
>ref|XM_507897.1| PREDICTED: Pan troglodytes similar to ATPase family, AAA domain containing 1 (LOC450580), mRNA Length = 1250 Score = 48.1 bits (24), Expect = 0.020 Identities = 48/56 (85%) Strand = Plus / Plus Query: 119 aaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggc 174 ||||||||||| ||||||| ||||| || ||||||||||| ||| | |||||||| Sbjct: 423 aaaggtgttcttctctatgggcctccaggctgtggtaaaacgttgattgccaaggc 478
>ref|XM_421556.1| PREDICTED: Gallus gallus similar to ATPase family, AAA domain containing 1 (LOC423676), mRNA Length = 2045 Score = 48.1 bits (24), Expect = 0.020 Identities = 30/32 (93%) Strand = Plus / Plus Query: 132 tctatggccctcctggatgtggtaaaaccttg 163 |||||||||||||||| ||||| ||||||||| Sbjct: 698 tctatggccctcctggctgtggcaaaaccttg 729
>gb|BC073998.1| Homo sapiens ATPase family, AAA domain containing 1, mRNA (cDNA clone MGC:90254 IMAGE:6199813), complete cds Length = 2792 Score = 48.1 bits (24), Expect = 0.020 Identities = 48/56 (85%) Strand = Plus / Plus Query: 119 aaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggc 174 ||||||||||| ||||||| ||||| || ||||||||||| ||| | |||||||| Sbjct: 400 aaaggtgttcttctctatgggcctccaggctgtggtaaaacgttgattgccaaggc 455
>gb|BC063530.1| Homo sapiens ATPase family, AAA domain containing 1, mRNA (cDNA clone IMAGE:4386512), partial cds Length = 2501 Score = 48.1 bits (24), Expect = 0.020 Identities = 48/56 (85%) Strand = Plus / Plus Query: 119 aaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggc 174 ||||||||||| ||||||| ||||| || ||||||||||| ||| | |||||||| Sbjct: 288 aaaggtgttcttctctatgggcctccaggctgtggtaaaacgttgattgccaaggc 343
>ref|XM_750952.1| Aspergillus fumigatus Af293 cell division control protein Cdc48 (Afu2g17110) partial mRNA Length = 2460 Score = 48.1 bits (24), Expect = 0.020 Identities = 183/236 (77%) Strand = Plus / Plus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 |||| ||||||||||||||||| | ||||| || ||||| |||| ||||| |||| Sbjct: 1484 gggaggatattggtggtctggaggaggtcaagcgcgagctcatcgagagcgtccaatacc 1543 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 ||||||| || || || || ||| ||||||| ||| | || || ||| |||||||||| Sbjct: 1544 ctgtggatcaccccgaaaagttccagaagttcggcctttcgccatcccgtggtgttctgt 1603 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| |||||||| |||||| ||| || | |||||||| | || || ||||| Sbjct: 1604 tctatggtcctcctggtactggtaagaccatgcttgccaaggccgtggcgaacgagtgtg 1663 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgag 247 || ||||||||| |||||||||||||||| || | ||||||||| |||||| Sbjct: 1664 ctgccaacttcatctcagtcaagggacctgagcttctgagcatgtggttcggtgag 1719
>gb|AY080962.1| Aspergillus fumigatus Mvp1p (25d9-1), Nha1p (25d9-2), 25D9-9 (25d9-9), 25D9-10 (25d9-10), Ste50p (25d9-3), Cdc48p (25d9-4), 25D9-5p (25d9-5), 25D9-11 (25d9-11), 25D9-6 (25d9-6), Nip7p (25d9-7), Noc3p (25d9-8), and 25D9-12 (25d9-12) genes, complete cds Length = 41396 Score = 48.1 bits (24), Expect = 0.020 Identities = 183/236 (77%) Strand = Plus / Minus Query: 12 gggaagatattggtggtctggaaaatgtcaaacgggagctgcaggagactgtccagtacc 71 |||| ||||||||||||||||| | ||||| || ||||| |||| ||||| |||| Sbjct: 25002 gggaggatattggtggtctggaggaggtcaagcgcgagctcatcgagagcgtccaatacc 24943 Query: 72 ctgtggagcatccagagaaattcgagaagtttggcatgtccccttccaaaggtgttctgt 131 ||||||| || || || || ||| ||||||| ||| | || || ||| |||||||||| Sbjct: 24942 ctgtggatcaccccgaaaagttccagaagttcggcctttcgccatcccgtggtgttctgt 24883 Query: 132 tctatggccctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatgagtgcc 191 ||||||| |||||||| |||||| ||| || | |||||||| | || || ||||| Sbjct: 24882 tctatggtcctcctggtactggtaagaccatgcttgccaaggccgtggcgaacgagtgtg 24823 Query: 192 aggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgag 247 || ||||||||| |||||||||||||||| || | ||||||||| |||||| Sbjct: 24822 ctgccaacttcatctcagtcaagggacctgagcttctgagcatgtggttcggtgag 24767
>emb|AL834370.1|HSM805442 Homo sapiens mRNA; cDNA DKFZp762C1113 (from clone DKFZp762C1113) Length = 2543 Score = 48.1 bits (24), Expect = 0.020 Identities = 48/56 (85%) Strand = Plus / Plus Query: 119 aaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggc 174 ||||||||||| ||||||| ||||| || ||||||||||| ||| | |||||||| Sbjct: 242 aaaggtgttcttctctatgggcctccaggctgtggtaaaacgttgattgccaaggc 297
>dbj|AK075223.1| Homo sapiens cDNA FLJ90742 fis, clone PLACE1011181, weakly similar to MSP1 PROTEIN HOMOLOG Length = 3034 Score = 48.1 bits (24), Expect = 0.020 Identities = 48/56 (85%) Strand = Plus / Plus Query: 119 aaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggc 174 ||||||||||| ||||||| ||||| || ||||||||||| ||| | |||||||| Sbjct: 758 aaaggtgttcttctctatgggcctccaggctgtggtaaaacgttgattgccaaggc 813
>dbj|AK027506.1| Homo sapiens cDNA FLJ14600 fis, clone NT2RM4002594, moderately similar to MSP1 PROTEIN HOMOLOG Length = 2334 Score = 48.1 bits (24), Expect = 0.020 Identities = 48/56 (85%) Strand = Plus / Plus Query: 119 aaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggc 174 ||||||||||| ||||||| ||||| || ||||||||||| ||| | |||||||| Sbjct: 57 aaaggtgttcttctctatgggcctccaggctgtggtaaaacgttgattgccaaggc 112
>ref|NM_032810.2| Homo sapiens ATPase family, AAA domain containing 1 (ATAD1), mRNA Length = 3034 Score = 48.1 bits (24), Expect = 0.020 Identities = 48/56 (85%) Strand = Plus / Plus Query: 119 aaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggc 174 ||||||||||| ||||||| ||||| || ||||||||||| ||| | |||||||| Sbjct: 758 aaaggtgttcttctctatgggcctccaggctgtggtaaaacgttgattgccaaggc 813
>gb|AF361493.1|AF361493 Homo sapiens FNP001 mRNA, complete cds Length = 2956 Score = 48.1 bits (24), Expect = 0.020 Identities = 48/56 (85%) Strand = Plus / Plus Query: 119 aaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggc 174 ||||||||||| ||||||| ||||| || ||||||||||| ||| | |||||||| Sbjct: 663 aaaggtgttcttctctatgggcctccaggctgtggtaaaacgttgattgccaaggc 718
>emb|BX932475.2| Gallus gallus finished cDNA, clone ChEST629e1 Length = 1417 Score = 48.1 bits (24), Expect = 0.020 Identities = 30/32 (93%) Strand = Plus / Plus Query: 132 tctatggccctcctggatgtggtaaaaccttg 163 |||||||||||||||| ||||| ||||||||| Sbjct: 716 tctatggccctcctggctgtggcaaaaccttg 747
>ref|NM_111027.2| Arabidopsis thaliana CDC48C; ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding AT3G01610 (CDC48C) mRNA, complete cds Length = 2731 Score = 46.1 bits (23), Expect = 0.078 Identities = 26/27 (96%) Strand = Plus / Plus Query: 293 gcaccatgtgtactcttctttgatgag 319 |||||||||||| |||||||||||||| Sbjct: 1997 gcaccatgtgtaatcttctttgatgag 2023
>ref|XM_960868.1| Encephalitozoon cuniculi GB-M1 ATPase (ECU01_1230) partial mRNA Length = 2343 Score = 46.1 bits (23), Expect = 0.078 Identities = 89/111 (80%) Strand = Plus / Plus Query: 46 ggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaagtttgg 105 ||||||| ||| ||||| ||||| ||||||||| |||| ||||| ||| |||||||| Sbjct: 1473 ggagctgagggaaactgtgcagtatcctgtggagtatcctgagaagttcataaagtttgg 1532 Query: 106 catgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaa 156 ||| | ||| | || ||||| ||||||| || ||||| ||||||||||| Sbjct: 1533 aatgacgcctgctaagggtgtcttgttctacgggcctccgggatgtggtaa 1583
>gb|AE017199.1| Nanoarchaeum equitans Kin4-M, complete genome Length = 490885 Score = 46.1 bits (23), Expect = 0.078 Identities = 41/47 (87%) Strand = Plus / Plus Query: 119 aaaggtgttctgttctatggccctcctggatgtggtaaaaccttgtt 165 ||||||||||| || ||||| ||||||||| ||||||||| ||||| Sbjct: 422051 aaaggtgttctattatatggtcctcctggaactggtaaaacattgtt 422097 Score = 42.1 bits (21), Expect = 1.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 119 aaaggtgttctgttctatggccctcctggatgtggtaaaac 159 ||||||||||| || |||||||| |||||| ||||||||| Sbjct: 168934 aaaggtgttctattgtatggcccccctggaactggtaaaac 168974
>ref|XM_817728.1| Trypanosoma brucei TREU927 valosin-containing protein homolog (Tb10.70.1190) partial mRNA Length = 2343 Score = 46.1 bits (23), Expect = 0.078 Identities = 59/71 (83%) Strand = Plus / Plus Query: 191 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 250 ||||| ||||||||| |||||||| || || ||||| || |||||||||||||| | Sbjct: 1573 caggcaaacttcatctccatcaaggggccggaactgctaacgatgtggtttggtgaatct 1632 Query: 251 gaggctaatgt 261 ||||||||||| Sbjct: 1633 gaggctaatgt 1643
>ref|XM_445539.1| Candida glabrata CBS138, CAGL0D02838g partial mRNA Length = 2505 Score = 46.1 bits (23), Expect = 0.078 Identities = 26/27 (96%) Strand = Plus / Plus Query: 135 atggccctcctggatgtggtaaaacct 161 ||||||||||||| ||||||||||||| Sbjct: 713 atggccctcctggttgtggtaaaacct 739
>gb|AC009325.8|ATAC009325 Arabidopsis thaliana chromosome III BAC F4P13 genomic sequence, complete sequence Length = 105543 Score = 46.1 bits (23), Expect = 0.078 Identities = 26/27 (96%) Strand = Plus / Plus Query: 293 gcaccatgtgtactcttctttgatgag 319 |||||||||||| |||||||||||||| Sbjct: 56000 gcaccatgtgtaatcttctttgatgag 56026
>ref|XM_663100.1| Cryptosporidium hominis TU502 AAA ATPase (Chro.50178) partial mRNA Length = 2073 Score = 46.1 bits (23), Expect = 0.078 Identities = 26/27 (96%) Strand = Plus / Plus Query: 134 tatggccctcctggatgtggtaaaacc 160 |||||||| |||||||||||||||||| Sbjct: 1327 tatggcccccctggatgtggtaaaacc 1353
>emb|CR380950.1| Candida glabrata strain CBS138 chromosome D complete sequence Length = 651701 Score = 46.1 bits (23), Expect = 0.078 Identities = 26/27 (96%) Strand = Plus / Minus Query: 135 atggccctcctggatgtggtaaaacct 161 ||||||||||||| ||||||||||||| Sbjct: 298195 atggccctcctggttgtggtaaaacct 298169
>emb|AL391737.2|CNS06C8G chromosome I of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 209982 Score = 46.1 bits (23), Expect = 0.078 Identities = 89/111 (80%) Strand = Plus / Minus Query: 46 ggagctgcaggagactgtccagtaccctgtggagcatccagagaaattcgagaagtttgg 105 ||||||| ||| ||||| ||||| ||||||||| |||| ||||| ||| |||||||| Sbjct: 147392 ggagctgagggaaactgtgcagtatcctgtggagtatcctgagaagttcataaagtttgg 147333 Query: 106 catgtccccttccaaaggtgttctgttctatggccctcctggatgtggtaa 156 ||| | ||| | || ||||| ||||||| || ||||| ||||||||||| Sbjct: 147332 aatgacgcctgctaagggtgtcttgttctacgggcctccgggatgtggtaa 147282
>gb|AY136443.1| Arabidopsis thaliana putative cell division control protein (At3g01610) mRNA, complete cds Length = 2627 Score = 46.1 bits (23), Expect = 0.078 Identities = 26/27 (96%) Strand = Plus / Plus Query: 293 gcaccatgtgtactcttctttgatgag 319 |||||||||||| |||||||||||||| Sbjct: 1894 gcaccatgtgtaatcttctttgatgag 1920
>ref|XM_626142.1| Cryptosporidium parvum Iowa II nuclear VCP like protein with 2 AAA ATpase domains, transcripts identified by EST (cgd5_2010), partial mRNA Length = 2088 Score = 46.1 bits (23), Expect = 0.078 Identities = 26/27 (96%) Strand = Plus / Plus Query: 134 tatggccctcctggatgtggtaaaacc 160 |||||||| |||||||||||||||||| Sbjct: 1342 tatggcccccctggatgtggtaaaacc 1368
>ref|NM_001021693.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC16E9.10c), partial mRNA Length = 2340 Score = 46.1 bits (23), Expect = 0.078 Identities = 41/47 (87%) Strand = Plus / Plus Query: 140 cctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatga 186 |||||||||||||||||||| ||||||| || || |||||||||| Sbjct: 1600 cctcctggatgtggtaaaactctgttggctaaagcggttgcaaatga 1646
>gb|BT002135.1| Arabidopsis thaliana putative cell division control protein (At3g01610) mRNA, complete cds Length = 2515 Score = 46.1 bits (23), Expect = 0.078 Identities = 26/27 (96%) Strand = Plus / Plus Query: 293 gcaccatgtgtactcttctttgatgag 319 |||||||||||| |||||||||||||| Sbjct: 1858 gcaccatgtgtaatcttctttgatgag 1884
>gb|AF044488.1|AF044488 Trypanosoma brucei valosin-containing protein homolog (VCP) gene, complete cds Length = 2463 Score = 46.1 bits (23), Expect = 0.078 Identities = 59/71 (83%) Strand = Plus / Plus Query: 191 caggctaacttcatcagtatcaagggacctgagctgcttaccatgtggtttggtgagagt 250 ||||| ||||||||| |||||||| || || ||||| || |||||||||||||| | Sbjct: 1657 caggcaaacttcatctccatcaaggggccggaactgctaacgatgtggtttggtgaatct 1716 Query: 251 gaggctaatgt 261 ||||||||||| Sbjct: 1717 gaggctaatgt 1727
>emb|Z99759.1|SPBC16E9 S.pombe chromosome II cosmid c16E9 Length = 40065 Score = 46.1 bits (23), Expect = 0.078 Identities = 41/47 (87%) Strand = Plus / Minus Query: 140 cctcctggatgtggtaaaaccttgttggccaaggcaattgcaaatga 186 |||||||||||||||||||| ||||||| || || |||||||||| Sbjct: 16386 cctcctggatgtggtaaaactctgttggctaaagcggttgcaaatga 16340
>ref|XM_635235.1| Dictyostelium discoideum hypothetical protein (DDB0218364), partial mRNA Length = 2604 Score = 44.1 bits (22), Expect = 0.31 Identities = 34/38 (89%) Strand = Plus / Plus Query: 144 ctggatgtggtaaaaccttgttggccaaggcaattgca 181 ||||||||||||||||||| || || || ||||||||| Sbjct: 776 ctggatgtggtaaaaccttattagcaaaagcaattgca 813
>gb|AY815849.1| Schistosoma japonicum SJCHGC09453 protein mRNA, complete cds Length = 2882 Score = 44.1 bits (22), Expect = 0.31 Identities = 43/50 (86%) Strand = Plus / Plus Query: 233 atgtggtttggtgagagtgaggctaatgtgcgtgagatctttgacaaggc 282 ||||||||||||||| |||||| || ||||| || || ||||||||||| Sbjct: 1676 atgtggtttggtgagtctgaggcaaacgtgcgggacatttttgacaaggc 1725
>gb|AC022016.7| Homo sapiens chromosome 10 clone RP11-165M8, complete sequence Length = 163031 Score = 44.1 bits (22), Expect = 0.31 Identities = 46/54 (85%) Strand = Plus / Minus Query: 121 aggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggc 174 ||||||||| ||||||| ||||| || ||||||||||| ||| | |||||||| Sbjct: 2494 aggtgttcttctctatgggcctccaggctgtggtaaaacgttgattgccaaggc 2441
>ref|XM_627893.1| Cryptosporidium parvum Iowa II CDC48 like AAA ATpase ortholog,transcripts identified by EST (cgd1_330), partial mRNA Length = 2463 Score = 44.1 bits (22), Expect = 0.31 Identities = 40/46 (86%) Strand = Plus / Plus Query: 210 tcaagggacctgagctgcttaccatgtggtttggtgagagtgaggc 255 |||| ||||| || || |||||| | |||||||||||||||||||| Sbjct: 1685 tcaaaggacccgaacttcttaccttatggtttggtgagagtgaggc 1730
>dbj|AK119311.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-G08, full insert sequence Length = 3224 Score = 44.1 bits (22), Expect = 0.31 Identities = 34/38 (89%) Strand = Plus / Plus Query: 210 tcaagggacctgagctgcttaccatgtggtttggtgag 247 ||||||| || |||||||| ||||||||||| |||||| Sbjct: 1938 tcaagggccccgagctgctgaccatgtggttcggtgag 1975
>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome Length = 2178400 Score = 44.1 bits (22), Expect = 0.31 Identities = 79/98 (80%) Strand = Plus / Minus Query: 152 ggtaaaaccttgttggccaaggcaattgcaaatgagtgccaggctaacttcatcagtatc 211 ||||| |||||| |||| ||||| | ||||| ||| || | || ||||||||||| | Sbjct: 1157605 ggtaagaccttgctggctaaggctgtggcaaacgagagcaatgcgaacttcatcagcgtg 1157546 Query: 212 aagggacctgagctgcttaccatgtggtttggtgagag 249 ||||| ||||||||||| | || |||| |||||||||| Sbjct: 1157545 aaggggcctgagctgctgagcaagtgggttggtgagag 1157508
>ref|NM_012216.2| Homo sapiens midline 2 (MID2), transcript variant 1, mRNA Length = 2523 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 gccaggctaacttcatcagta 209 ||||||||||||||||||||| Sbjct: 1525 gccaggctaacttcatcagta 1545
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 152 ggtaaaaccttgttggccaaggcaattgc 180 |||||||||||| |||||||||| ||||| Sbjct: 906568 ggtaaaaccttgctggccaaggcgattgc 906596
>gb|AY625005.1| Cercopithecus aethiops cell-line Vero Trim1 alpha mRNA, complete cds Length = 2148 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 gccaggctaacttcatcagta 209 ||||||||||||||||||||| Sbjct: 1268 gccaggctaacttcatcagta 1288
>gb|AY557772.1| Saccharomyces cerevisiae clone FLH111206.01X YGR028W gene, complete cds Length = 1089 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 146 ggatgtggtaaaaccttgttggccaaggc 174 ||||||||||||||| ||||||| ||||| Sbjct: 406 ggatgtggtaaaaccatgttggcgaaggc 434
>gb|AC162914.2| Mus musculus BAC clone RP23-401O13 from chromosome 6, complete sequence Length = 194892 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 tacccagagaggaagcagtgt 355 ||||||||||||||||||||| Sbjct: 67963 tacccagagaggaagcagtgt 67983
>ref|XM_976809.1| PREDICTED: Mus musculus midline 2, transcript variant 3 (Mid2), mRNA Length = 2217 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 gccaggctaacttcatcagta 209 ||||||||||||||||||||| Sbjct: 1046 gccaggctaacttcatcagta 1066
>ref|XM_976732.1| PREDICTED: Mus musculus midline 2, transcript variant 1 (Mid2), mRNA Length = 2695 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 gccaggctaacttcatcagta 209 ||||||||||||||||||||| Sbjct: 1268 gccaggctaacttcatcagta 1288
>ref|XM_534778.2| PREDICTED: Canis familiaris similar to ATPase family, AAA domain containing 1 (LOC477584), mRNA Length = 1277 Score = 42.1 bits (21), Expect = 1.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 122 ggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggc 174 |||||||| ||||||| ||||| || ||||||||||| ||| | |||||||| Sbjct: 553 ggtgttcttctctatgggcctccagggtgtggtaaaacgttgattgccaaggc 605
>gb|AC118245.17| Mus musculus chromosome 6, clone RP23-292C5, complete sequence Length = 230218 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 tacccagagaggaagcagtgt 355 ||||||||||||||||||||| Sbjct: 71692 tacccagagaggaagcagtgt 71672
>gb|BC054287.1| Xenopus laevis protease (prosome, macropain) 26S subunit, ATPase 1, mRNA (cDNA clone MGC:64535 IMAGE:6878698), complete cds Length = 1595 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 152 ggtaaaaccttgttggccaaggcaattgcaaat 184 |||||||| ||||||||||| ||| |||||||| Sbjct: 722 ggtaaaacattgttggccaaagcagttgcaaat 754
>ref|XM_645469.1| Entamoeba histolytica HM-1:IMSS AAA family ATPase (211.t00004) partial mRNA Length = 1869 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 135 atggccctcctggatgtggtaaaac 159 |||| |||||||||||||||||||| Sbjct: 242 atggacctcctggatgtggtaaaac 266
>ref|XM_502194.1| Yarrowia lipolytica CLIB122, YALI0C23749g predicted mRNA Length = 1152 Score = 42.1 bits (21), Expect = 1.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 134 tatggccctcctggatgtggtaaaaccttgttggccaaggc 174 |||||||||||||| ||||| || ||| || |||||||||| Sbjct: 460 tatggccctcctggctgtggaaagaccatgctggccaaggc 500
>emb|Z46259.1|SCRPD3COS S.cerevisiae FY1676 RPD3 gene Length = 40050 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 240 ttggtgagagtgaggctaatgtgcg 264 ||||||||||||| ||||||||||| Sbjct: 1519 ttggtgagagtgaagctaatgtgcg 1495
>emb|BX028304.1|CNS08U04 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA42BC03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 816 Score = 42.1 bits (21), Expect = 1.2 Identities = 60/73 (82%) Strand = Plus / Plus Query: 210 tcaagggacctgagctgcttaccatgtggtttggtgagagtgaggctaatgtgcgtgaga 269 ||||||| || |||||||| ||||||||||| || ||| ||||| || ||||| || | Sbjct: 444 tcaagggcccggagctgctgaccatgtggttcggcgagtcggaggcgaacgtgcgcgaca 503 Query: 270 tctttgacaaggc 282 |||| |||||||| Sbjct: 504 tcttcgacaaggc 516
>emb|Z72813.1|SCYGR028W S.cerevisiae chromosome VII reading frame ORF YGR028w Length = 9393 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 146 ggatgtggtaaaaccttgttggccaaggc 174 ||||||||||||||| ||||||| ||||| Sbjct: 8150 ggatgtggtaaaaccatgttggcgaaggc 8178
>emb|Z71605.1|SCYNL329C S.cerevisiae chromosome XIV reading frame ORF YNL329c Length = 4135 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 240 ttggtgagagtgaggctaatgtgcg 264 ||||||||||||| ||||||||||| Sbjct: 1519 ttggtgagagtgaagctaatgtgcg 1495
>emb|Z48502.1|SC9532X S.cerevisiae chromosome XIII cosmid 9532 Length = 24105 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 tttggtgagagtgaggctaat 259 ||||||||||||||||||||| Sbjct: 12805 tttggtgagagtgaggctaat 12825
>emb|X81069.1|SCYTA4 S.cerevisiae YTA4 gene Length = 2429 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 146 ggatgtggtaaaaccttgttggccaaggc 174 ||||||||||||||| ||||||| ||||| Sbjct: 1123 ggatgtggtaaaaccatgttggcgaaggc 1151
>emb|X83226.1|SCDNANO S.cerevisiae chromosome XIV, N0295, N0300, N0305 & N0310 genes Length = 8223 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 240 ttggtgagagtgaggctaatgtgcg 264 ||||||||||||| ||||||||||| Sbjct: 6228 ttggtgagagtgaagctaatgtgcg 6204
>emb|X68055.1|SCMSPERV S.cerevisiae genes for MSP1 and ERV1 proteins, and tRNA-Glu Length = 2930 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 146 ggatgtggtaaaaccttgttggccaaggc 174 ||||||||||||||| ||||||| ||||| Sbjct: 956 ggatgtggtaaaaccatgttggcgaaggc 984
>emb|CR857582.1| Pongo pygmaeus mRNA; cDNA DKFZp459M1150 (from clone DKFZp459M1150) Length = 4069 Score = 42.1 bits (21), Expect = 1.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 122 ggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggc 174 |||||||| ||||||| ||||| || ||||||||||| ||| | |||||||| Sbjct: 517 ggtgttcttctctatgggcctccaggctgtggtaaaacgttgattgccaaggc 569
>gb|AE010137.1| Pyrococcus furiosus DSM 3638, section 12 of 173 of the complete genome Length = 11952 Score = 42.1 bits (21), Expect = 1.2 Identities = 45/53 (84%) Strand = Plus / Minus Query: 125 gttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggcaat 177 |||||| ||||||| || ||||||||||| ||||| || |||| |||||||| Sbjct: 11362 gttctgctctatggaccacctggatgtggaaaaactttaatggctaaggcaat 11310
>ref|XM_686405.1| PREDICTED: Danio rerio similar to two AAA domain containing protein (LOC563039), partial mRNA Length = 3185 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 tctgttctatggccctcctgg 147 ||||||||||||||||||||| Sbjct: 1369 tctgttctatggccctcctgg 1389
>dbj|AK039479.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330048M13 product:midline 2, full insert sequence Length = 2069 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 gccaggctaacttcatcagta 209 ||||||||||||||||||||| Sbjct: 900 gccaggctaacttcatcagta 920
>ref|XM_343825.2| PREDICTED: Rattus norvegicus similar to Trim1 alpha (LOC363502), mRNA Length = 2680 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 gccaggctaacttcatcagta 209 ||||||||||||||||||||| Sbjct: 1682 gccaggctaacttcatcagta 1702
>dbj|AK209378.1| Mus musculus cDNA, clone:Y2G0114O17, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 410 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 tgtgtactcttctttgatgag 319 ||||||||||||||||||||| Sbjct: 37 tgtgtactcttctttgatgag 57
>dbj|AK209215.1| Mus musculus cDNA, clone:Y2G0114F19, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 408 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 tgtgtactcttctttgatgag 319 ||||||||||||||||||||| Sbjct: 37 tgtgtactcttctttgatgag 57
>dbj|AK186028.1| Mus musculus cDNA, clone:Y0G0136A10, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030164, based on BLAT search Length = 399 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 tgtgtactcttctttgatgag 319 ||||||||||||||||||||| Sbjct: 37 tgtgtactcttctttgatgag 57
>emb|Y18880.1|HOS18880 Homo sapiens mRNA for MID2 protein Length = 2524 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 gccaggctaacttcatcagta 209 ||||||||||||||||||||| Sbjct: 1525 gccaggctaacttcatcagta 1545
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 152 ggtaaaaccttgttggccaaggcaattgc 180 |||||||||||||||||||| || ||||| Sbjct: 817519 ggtaaaaccttgttggccaaagccattgc 817547
>emb|BX470203.6| Mouse DNA sequence from clone RP23-290J11 on chromosome X, complete sequence Length = 53518 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 gccaggctaacttcatcagta 209 ||||||||||||||||||||| Sbjct: 19705 gccaggctaacttcatcagta 19725
>emb|AL034399.6|HS191P20 Human DNA sequence from clone RP6-191P20 on chromosome Xq23 Contains the TEX13B gene for testis expressed sequence 13B, a novel pseudogene, the 3' end of the MID2 gene for midline 2 (FXY2, RNF60, TRIM1), a novel gene and a CpG island, complete sequence Length = 118456 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 189 gccaggctaacttcatcagta 209 ||||||||||||||||||||| Sbjct: 86501 gccaggctaacttcatcagta 86481
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 42.1 bits (21), Expect = 1.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 134 tatggccctcctggatgtggtaaaaccttgttggccaaggc 174 |||||||||||||| ||||| || ||| || |||||||||| Sbjct: 3186566 tatggccctcctggctgtggaaagaccatgctggccaaggc 3186606
>gb|L20789.1|YSCPAS8A Yeast PAS8 gene, complete cds Length = 3807 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 240 ttggtgagagtgaggctaatgtgcg 264 ||||||||||||| ||||||||||| Sbjct: 2887 ttggtgagagtgaagctaatgtgcg 2911
>gb|BT016035.1| Drosophila melanogaster RE01104 full insert cDNA Length = 1442 Score = 40.1 bits (20), Expect = 4.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 143 cctggatgtggtaaaaccttgttggccaaggc 174 ||||||||||| |||||| || |||||||||| Sbjct: 620 cctggatgtggcaaaaccatgctggccaaggc 651
>ref|XM_872132.1| PREDICTED: Bos taurus similar to ATPase family, AAA domain containing 1, transcript variant 2 (LOC506045), mRNA Length = 2417 Score = 40.1 bits (20), Expect = 4.8 Identities = 47/56 (83%) Strand = Plus / Plus Query: 119 aaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggc 174 |||||||| || ||||||| ||||| || ||||||||||| ||| | |||||||| Sbjct: 296 aaaggtgtgcttctctatgggcctccaggctgtggtaaaacgttgattgccaaggc 351
>ref|XM_582436.2| PREDICTED: Bos taurus similar to ATPase family, AAA domain containing 1, transcript variant 1 (LOC506045), mRNA Length = 2674 Score = 40.1 bits (20), Expect = 4.8 Identities = 47/56 (83%) Strand = Plus / Plus Query: 119 aaaggtgttctgttctatggccctcctggatgtggtaaaaccttgttggccaaggc 174 |||||||| || ||||||| ||||| || ||||||||||| ||| | |||||||| Sbjct: 446 aaaggtgtgcttctctatgggcctccaggctgtggtaaaacgttgattgccaaggc 501
>ref|XM_645819.1| Entamoeba histolytica HM-1:IMSS cdc48-like protein (192.t00007) partial mRNA Length = 2319 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 291 cagcaccatgtgtactcttctttgatga 318 |||||||||||||| | ||||||||||| Sbjct: 1703 cagcaccatgtgtattattctttgatga 1730
>ref|XM_652237.1| Entamoeba histolytica HM-1:IMSS cell division cycle protein 48, putative (3.t00077) partial mRNA Length = 2385 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 291 cagcaccatgtgtactcttctttgatga 318 |||||||||||||| | ||||||||||| Sbjct: 1670 cagcaccatgtgtattattctttgatga 1697
>gb|AC148655.4| Medicago truncatula clone mth2-61c11, complete sequence Length = 89884 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gccaaggcaattgcaaatga 186 |||||||||||||||||||| Sbjct: 79187 gccaaggcaattgcaaatga 79168
>emb|AL158074.18| Human DNA sequence from clone RP11-330J23 on chromosome 9p21.1-22.3, complete sequence Length = 133690 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 tcttctttgatgagctttga 325 |||||||||||||||||||| Sbjct: 19082 tcttctttgatgagctttga 19063
>emb|Z98533.1|SPAC6F12 S.pombe chromosome I cosmid c6F12 Length = 44658 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 212 aagggacctgagctgcttaccatgtggtttggtgag 247 |||||||| || |||||| |||||||||||||||| Sbjct: 538 aagggacccgaattgcttagcatgtggtttggtgag 573
>emb|BX897700.1| Bartonella quintana str. Toulouse, complete genome Length = 1581384 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 gcatgtccccttccaaaggt 124 |||||||||||||||||||| Sbjct: 1342747 gcatgtccccttccaaaggt 1342728
>emb|AL645469.18| Mouse DNA sequence from clone RP23-340E18 on chromosome 11 Contains the Mylc2a gene for myosin light chain, regulatory A, the Gck gene for glucokinase, a novel gene, the gene for prenylated SNARE protein (Ykt6), the Camk2d gene for calcium/calmodulin-dependent protein kinase II delta and two CpG islands, complete sequence Length = 172356 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 gctacccagagaggaagcag 352 |||||||||||||||||||| Sbjct: 1625 gctacccagagaggaagcag 1644
>emb|AL627069.10| Mouse DNA sequence from clone RP23-385C16 on chromosome 11 Contains the Mrps24 gene for mitochondrial ribosomal protein S24, a novel gene, a ubiquitin-conjugating enzyme E2D (Ube2d) pseudogene, the Dbnl gene for drebrin-like, the Pgam2 gene for phosphoglycerate mutase 2, a pseudogene similar to part of H+ transporting mitochondrial F0 complex ATP synthase subunit F Atp5j, the Polm gene for polymerase (DNA directed) mu, the Aebp1 gene for AE binding protein 1, the Pold2 gene for polymerase (DNA directed) delta 2 regulatory subunit, novel gene (1600028I17Rik) and seven CpG islands, complete sequence Length = 195129 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 gctacccagagaggaagcag 352 |||||||||||||||||||| Sbjct: 194754 gctacccagagaggaagcag 194773
>emb|AL157991.1|SPCC24B10 S.pombe chromosome III cosmid c24B10 Length = 40751 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 cctcctggatgtggtaaaac 159 |||||||||||||||||||| Sbjct: 17530 cctcctggatgtggtaaaac 17511
>gb|AC087385.5| Homo sapiens chromosome 15, clone RP11-745A24, complete sequence Length = 190890 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 gtcaaacgggagctgcagga 57 |||||||||||||||||||| Sbjct: 156031 gtcaaacgggagctgcagga 156012
>gb|AY113319.1| Drosophila melanogaster AT28212 full insert cDNA Length = 1234 Score = 40.1 bits (20), Expect = 4.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 143 cctggatgtggtaaaaccttgttggccaaggc 174 ||||||||||| |||||| || |||||||||| Sbjct: 467 cctggatgtggcaaaaccatgctggccaaggc 498
>ref|NM_169308.2| Drosophila melanogaster Rpt3R CG9475-RB, transcript variant B (Rpt3R), mRNA Length = 1371 Score = 40.1 bits (20), Expect = 4.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 143 cctggatgtggtaaaaccttgttggccaaggc 174 ||||||||||| |||||| || |||||||||| Sbjct: 571 cctggatgtggcaaaaccatgctggccaaggc 602
>dbj|AP003603.1| Nostoc sp. PCC 7120 plasmid pCC7120gamma DNA, complete sequence Length = 101965 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 cctggatgtggtaaaacctt 162 |||||||||||||||||||| Sbjct: 12161 cctggatgtggtaaaacctt 12180
>ref|NM_141681.1| Drosophila melanogaster Rpt3R CG9475-RA, transcript variant A (Rpt3R), mRNA Length = 1467 Score = 40.1 bits (20), Expect = 4.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 143 cctggatgtggtaaaaccttgttggccaaggc 174 ||||||||||| |||||| || |||||||||| Sbjct: 667 cctggatgtggcaaaaccatgctggccaaggc 698
>ref|NM_001023004.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCC24B10.10c), partial mRNA Length = 1068 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 cctcctggatgtggtaaaac 159 |||||||||||||||||||| Sbjct: 397 cctcctggatgtggtaaaac 416
>ref|NM_001018717.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC1565.08), partial mRNA Length = 2448 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 212 aagggacctgagctgcttaccatgtggtttggtgag 247 |||||||| || |||||| |||||||||||||||| Sbjct: 1687 aagggacccgaattgcttagcatgtggtttggtgag 1722
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 actcttctttgatgagcttt 323 |||||||||||||||||||| Sbjct: 6543095 actcttctttgatgagcttt 6543114
>gb|AC008316.3|AC008316 Drosophila melanogaster, chromosome 3R, region 85F-85F, BAC clone BACR23O04, complete sequence Length = 160817 Score = 40.1 bits (20), Expect = 4.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 143 cctggatgtggtaaaaccttgttggccaaggc 174 ||||||||||| |||||| || |||||||||| Sbjct: 30121 cctggatgtggcaaaaccatgctggccaaggc 30090
>gb|AC008315.9|AC008315 Drosophila melanogaster, chromosome 3R, region 85E-85E, BAC clone BACR30F01, complete sequence Length = 177028 Score = 40.1 bits (20), Expect = 4.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 143 cctggatgtggtaaaaccttgttggccaaggc 174 ||||||||||| |||||| || |||||||||| Sbjct: 137274 cctggatgtggcaaaaccatgctggccaaggc 137243
>gb|AF199367.1|AF199367 Entamoeba histolytica cdc48-like protein gene, complete cds Length = 2319 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 291 cagcaccatgtgtactcttctttgatga 318 |||||||||||||| | ||||||||||| Sbjct: 1703 cagcaccatgtgtattattctttgatga 1730
>dbj|AP005160.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0031C24 Length = 194111 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 actcttctttgatgagcttt 323 |||||||||||||||||||| Sbjct: 55189 actcttctttgatgagcttt 55208
>gb|AE003684.4| Drosophila melanogaster chromosome 3R, section 22 of 118 of the complete sequence Length = 214323 Score = 40.1 bits (20), Expect = 4.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 143 cctggatgtggtaaaaccttgttggccaaggc 174 ||||||||||| |||||| || |||||||||| Sbjct: 49844 cctggatgtggcaaaaccatgctggccaaggc 49813
>gb|AC123548.4| Mus musculus BAC clone RP23-441J16 from 6, complete sequence Length = 178488 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ttctgttctatggccctcct 145 |||||||||||||||||||| Sbjct: 89458 ttctgttctatggccctcct 89477 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,386,265 Number of Sequences: 3902068 Number of extensions: 3386265 Number of successful extensions: 86397 Number of sequences better than 10.0: 250 Number of HSP's better than 10.0 without gapping: 250 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 85759 Number of HSP's gapped (non-prelim): 578 length of query: 360 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 338 effective length of database: 17,147,199,772 effective search space: 5795753522936 effective search space used: 5795753522936 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)