ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags32l08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_479406.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3125 Score = 270 bits (136), Expect = 2e-69 Identities = 257/295 (87%), Gaps = 2/295 (0%) Strand = Plus / Plus Query: 17 tttggggacggaana-tgcaagaaagagccagcagtctgagtttgttgatt-atcgggtg 74 ||||||||||||| | || |||||| || || ||||| || || | ||||| |||||||| Sbjct: 1939 tttggggacggaacaatggaagaaaaagtcaacagtcagaattggctgattcatcgggtg 1998 Query: 75 aagaagagcttgctatccaaaggcttgagatcgcaaagaatgatctgcaaatcaggattg 134 |||||||||||||||||||||| || |||||| |||||||||| || || ||||| || | Sbjct: 1999 aagaagagcttgctatccaaagactggagatcacaaagaatgacctccagatcagaatcg 2058 Query: 135 caaaagagactggaggtaatgcaatcttacaggctagtttggaaagaagaaagcaagcac 194 | |||||| || |||| |||||||||||||| || ||||||||||||||||| ||||||| Sbjct: 2059 cgaaagaggctagaggaaatgcaatcttacaagcaagtttggaaagaagaaaacaagcac 2118 Query: 195 tgcatgagcgccgtttggtgctggaacaagatgtatcaaggttgcaagagcagctgcagg 254 | |||||||||||||||| ||||| || ||||| |||||||||||||||||||| || | Sbjct: 2119 tacatgagcgccgtttggctctggagcaggatgtttcaaggttgcaagagcagctacaag 2178 Query: 255 ctgaacgggatcttagagctgcattagaagttggattaagcatgtcttctgcaca 309 ||||| | ||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 2179 ctgaaagagatcttagagctgcattggaggttggattaagcatgtcttctgcaca 2233
>dbj|AK103870.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033149H24, full insert sequence Length = 3125 Score = 270 bits (136), Expect = 2e-69 Identities = 257/295 (87%), Gaps = 2/295 (0%) Strand = Plus / Plus Query: 17 tttggggacggaana-tgcaagaaagagccagcagtctgagtttgttgatt-atcgggtg 74 ||||||||||||| | || |||||| || || ||||| || || | ||||| |||||||| Sbjct: 1939 tttggggacggaacaatggaagaaaaagtcaacagtcagaattggctgattcatcgggtg 1998 Query: 75 aagaagagcttgctatccaaaggcttgagatcgcaaagaatgatctgcaaatcaggattg 134 |||||||||||||||||||||| || |||||| |||||||||| || || ||||| || | Sbjct: 1999 aagaagagcttgctatccaaagactggagatcacaaagaatgacctccagatcagaatcg 2058 Query: 135 caaaagagactggaggtaatgcaatcttacaggctagtttggaaagaagaaagcaagcac 194 | |||||| || |||| |||||||||||||| || ||||||||||||||||| ||||||| Sbjct: 2059 cgaaagaggctagaggaaatgcaatcttacaagcaagtttggaaagaagaaaacaagcac 2118 Query: 195 tgcatgagcgccgtttggtgctggaacaagatgtatcaaggttgcaagagcagctgcagg 254 | |||||||||||||||| ||||| || ||||| |||||||||||||||||||| || | Sbjct: 2119 tacatgagcgccgtttggctctggagcaggatgtttcaaggttgcaagagcagctacaag 2178 Query: 255 ctgaacgggatcttagagctgcattagaagttggattaagcatgtcttctgcaca 309 ||||| | ||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 2179 ctgaaagagatcttagagctgcattggaggttggattaagcatgtcttctgcaca 2233
>dbj|AK064580.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-112-F01, full insert sequence Length = 1592 Score = 270 bits (136), Expect = 2e-69 Identities = 257/295 (87%), Gaps = 2/295 (0%) Strand = Plus / Plus Query: 17 tttggggacggaana-tgcaagaaagagccagcagtctgagtttgttgatt-atcgggtg 74 ||||||||||||| | || |||||| || || ||||| || || | ||||| |||||||| Sbjct: 851 tttggggacggaacaatggaagaaaaagtcaacagtcagaattggctgattcatcgggtg 910 Query: 75 aagaagagcttgctatccaaaggcttgagatcgcaaagaatgatctgcaaatcaggattg 134 |||||||||||||||||||||| || |||||| |||||||||| || || ||||| || | Sbjct: 911 aagaagagcttgctatccaaagactggagatcacaaagaatgacctccagatcagaatcg 970 Query: 135 caaaagagactggaggtaatgcaatcttacaggctagtttggaaagaagaaagcaagcac 194 | |||||| || |||| |||||||||||||| || ||||||||||||||||| ||||||| Sbjct: 971 cgaaagaggctagaggaaatgcaatcttacaagcaagtttggaaagaagaaaacaagcac 1030 Query: 195 tgcatgagcgccgtttggtgctggaacaagatgtatcaaggttgcaagagcagctgcagg 254 | |||||||||||||||| ||||| || ||||| |||||||||||||||||||| || | Sbjct: 1031 tacatgagcgccgtttggctctggagcaggatgtttcaaggttgcaagagcagctacaag 1090 Query: 255 ctgaacgggatcttagagctgcattagaagttggattaagcatgtcttctgcaca 309 ||||| | ||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 1091 ctgaaagagatcttagagctgcattggaggttggattaagcatgtcttctgcaca 1145
>dbj|AK058967.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-C09, full insert sequence Length = 1736 Score = 270 bits (136), Expect = 2e-69 Identities = 257/295 (87%), Gaps = 2/295 (0%) Strand = Plus / Plus Query: 17 tttggggacggaana-tgcaagaaagagccagcagtctgagtttgttgatt-atcgggtg 74 ||||||||||||| | || |||||| || || ||||| || || | ||||| |||||||| Sbjct: 529 tttggggacggaacaatggaagaaaaagtcaacagtcagaattggctgattcatcgggtg 588 Query: 75 aagaagagcttgctatccaaaggcttgagatcgcaaagaatgatctgcaaatcaggattg 134 |||||||||||||||||||||| || |||||| |||||||||| || || ||||| || | Sbjct: 589 aagaagagcttgctatccaaagactggagatcacaaagaatgacctccagatcagaatcg 648 Query: 135 caaaagagactggaggtaatgcaatcttacaggctagtttggaaagaagaaagcaagcac 194 | |||||| || |||| |||||||||||||| || ||||||||||||||||| ||||||| Sbjct: 649 cgaaagaggctagaggaaatgcaatcttacaagcaagtttggaaagaagaaaacaagcac 708 Query: 195 tgcatgagcgccgtttggtgctggaacaagatgtatcaaggttgcaagagcagctgcagg 254 | |||||||||||||||| ||||| || ||||| |||||||||||||||||||| || | Sbjct: 709 tacatgagcgccgtttggctctggagcaggatgtttcaaggttgcaagagcagctacaag 768 Query: 255 ctgaacgggatcttagagctgcattagaagttggattaagcatgtcttctgcaca 309 ||||| | ||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 769 ctgaaagagatcttagagctgcattggaggttggattaagcatgtcttctgcaca 823
>gb|BT018903.1| Zea mays clone EL01T0208C03.d mRNA sequence Length = 2186 Score = 167 bits (84), Expect = 3e-38 Identities = 195/232 (84%) Strand = Plus / Plus Query: 74 gaagaagagcttgctatccaaaggcttgagatcgcaaagaatgatctgcaaatcaggatt 133 ||||||||||||||||| ||||| || ||||| || |||||||||||||||| ||| ||| Sbjct: 905 gaagaagagcttgctattcaaagactagagattgcgaagaatgatctgcaaaacagaatt 964 Query: 134 gcaaaagagactggaggtaatgcaatcttacaggctagtttggaaagaagaaagcaagca 193 ||||||||| || |||| |||||||| ||||||| ||||||||||||||||| ||||| Sbjct: 965 gcaaaagaggctagagggaatgcaattctacaggcgagtttggaaagaagaaaacaagcg 1024 Query: 194 ctgcatgagcgccgtttggtgctggaacaagatgtatcaaggttgcaagagcagctgcag 253 || ||||| ||| | |||| ||||||| ||||| || ||||||||||| || || || Sbjct: 1025 ctacatgaacgcagattggctttggaacaggatgtctccaggttgcaagaacaactacaa 1084 Query: 254 gctgaacgggatcttagagctgcattagaagttggattaagcatgtcttctg 305 ||||| ||||||| |||||||||| || ||||| || ||||||||||||| Sbjct: 1085 gctgagagggatctgcgagctgcattggaggttggcttgagcatgtcttctg 1136
>ref|NM_121944.2| Arabidopsis thaliana unknown protein AT5G19390 transcript variant AT5G19390.2 mRNA, complete cds Length = 3235 Score = 133 bits (67), Expect = 4e-28 Identities = 196/239 (82%) Strand = Plus / Plus Query: 74 gaagaagagcttgctatccaaaggcttgagatcgcaaagaatgatctgcaaatcaggatt 133 ||||| ||||||||||| || ||||| |||| | |||| ||||| |||| | | ||| Sbjct: 2069 gaagacgagcttgctatacagaggctcgagaccacaaaaaatgaactgcgacaacgaatt 2128 Query: 134 gcaaaagagactggaggtaatgcaatcttacaggctagtttggaaagaagaaagcaagca 193 ||||| ||| | ||||||||||||| ||||||||||| ||||| ||||| || |||||| Sbjct: 2129 gcaaaggaggccagaggtaatgcaatattacaggctagcttggagagaaggaaacaagca 2188 Query: 194 ctgcatgagcgccgtttggtgctggaacaagatgtatcaaggttgcaagagcagctgcag 253 |||||||| || |||||| ||| ||||||||||| ||||| || |||||||||||||| Sbjct: 2189 ctgcatgaacgtcgtttgtcgcttgaacaagatgtgtcaagattacaagagcagctgcaa 2248 Query: 254 gctgaacgggatcttagagctgcattagaagttggattaagcatgtcttctgcacaatt 312 |||||| | ||||| |||| ||| | || ||||| || ||||||||||||| |||||| Sbjct: 2249 gctgaaagagatctccgagcagcactggaggttggtttgagcatgtcttctggacaatt 2307
>ref|NM_001036828.1| Arabidopsis thaliana unknown protein AT5G19390 transcript variant AT5G19390.4 mRNA, complete cds Length = 2690 Score = 133 bits (67), Expect = 4e-28 Identities = 196/239 (82%) Strand = Plus / Plus Query: 74 gaagaagagcttgctatccaaaggcttgagatcgcaaagaatgatctgcaaatcaggatt 133 ||||| ||||||||||| || ||||| |||| | |||| ||||| |||| | | ||| Sbjct: 2074 gaagacgagcttgctatacagaggctcgagaccacaaaaaatgaactgcgacaacgaatt 2133 Query: 134 gcaaaagagactggaggtaatgcaatcttacaggctagtttggaaagaagaaagcaagca 193 ||||| ||| | ||||||||||||| ||||||||||| ||||| ||||| || |||||| Sbjct: 2134 gcaaaggaggccagaggtaatgcaatattacaggctagcttggagagaaggaaacaagca 2193 Query: 194 ctgcatgagcgccgtttggtgctggaacaagatgtatcaaggttgcaagagcagctgcag 253 |||||||| || |||||| ||| ||||||||||| ||||| || |||||||||||||| Sbjct: 2194 ctgcatgaacgtcgtttgtcgcttgaacaagatgtgtcaagattacaagagcagctgcaa 2253 Query: 254 gctgaacgggatcttagagctgcattagaagttggattaagcatgtcttctgcacaatt 312 |||||| | ||||| |||| ||| | || ||||| || ||||||||||||| |||||| Sbjct: 2254 gctgaaagagatctccgagcagcactggaggttggtttgagcatgtcttctggacaatt 2312
>ref|NM_001036827.1| Arabidopsis thaliana unknown protein AT5G19390 transcript variant AT5G19390.3 mRNA, complete cds Length = 3249 Score = 133 bits (67), Expect = 4e-28 Identities = 196/239 (82%) Strand = Plus / Plus Query: 74 gaagaagagcttgctatccaaaggcttgagatcgcaaagaatgatctgcaaatcaggatt 133 ||||| ||||||||||| || ||||| |||| | |||| ||||| |||| | | ||| Sbjct: 2074 gaagacgagcttgctatacagaggctcgagaccacaaaaaatgaactgcgacaacgaatt 2133 Query: 134 gcaaaagagactggaggtaatgcaatcttacaggctagtttggaaagaagaaagcaagca 193 ||||| ||| | ||||||||||||| ||||||||||| ||||| ||||| || |||||| Sbjct: 2134 gcaaaggaggccagaggtaatgcaatattacaggctagcttggagagaaggaaacaagca 2193 Query: 194 ctgcatgagcgccgtttggtgctggaacaagatgtatcaaggttgcaagagcagctgcag 253 |||||||| || |||||| ||| ||||||||||| ||||| || |||||||||||||| Sbjct: 2194 ctgcatgaacgtcgtttgtcgcttgaacaagatgtgtcaagattacaagagcagctgcaa 2253 Query: 254 gctgaacgggatcttagagctgcattagaagttggattaagcatgtcttctgcacaatt 312 |||||| | ||||| |||| ||| | || ||||| || ||||||||||||| |||||| Sbjct: 2254 gctgaaagagatctccgagcagcactggaggttggtttgagcatgtcttctggacaatt 2312
>ref|NM_180711.2| Arabidopsis thaliana unknown protein AT5G19390 transcript variant AT5G19390.1 mRNA, complete cds Length = 3182 Score = 133 bits (67), Expect = 4e-28 Identities = 196/239 (82%) Strand = Plus / Plus Query: 74 gaagaagagcttgctatccaaaggcttgagatcgcaaagaatgatctgcaaatcaggatt 133 ||||| ||||||||||| || ||||| |||| | |||| ||||| |||| | | ||| Sbjct: 2000 gaagacgagcttgctatacagaggctcgagaccacaaaaaatgaactgcgacaacgaatt 2059 Query: 134 gcaaaagagactggaggtaatgcaatcttacaggctagtttggaaagaagaaagcaagca 193 ||||| ||| | ||||||||||||| ||||||||||| ||||| ||||| || |||||| Sbjct: 2060 gcaaaggaggccagaggtaatgcaatattacaggctagcttggagagaaggaaacaagca 2119 Query: 194 ctgcatgagcgccgtttggtgctggaacaagatgtatcaaggttgcaagagcagctgcag 253 |||||||| || |||||| ||| ||||||||||| ||||| || |||||||||||||| Sbjct: 2120 ctgcatgaacgtcgtttgtcgcttgaacaagatgtgtcaagattacaagagcagctgcaa 2179 Query: 254 gctgaacgggatcttagagctgcattagaagttggattaagcatgtcttctgcacaatt 312 |||||| | ||||| |||| ||| | || ||||| || ||||||||||||| |||||| Sbjct: 2180 gctgaaagagatctccgagcagcactggaggttggtttgagcatgtcttctggacaatt 2238
>gb|AY091776.1| Arabidopsis thaliana AT5g19390/F7K24_140 mRNA, complete cds Length = 3235 Score = 133 bits (67), Expect = 4e-28 Identities = 196/239 (82%) Strand = Plus / Plus Query: 74 gaagaagagcttgctatccaaaggcttgagatcgcaaagaatgatctgcaaatcaggatt 133 ||||| ||||||||||| || ||||| |||| | |||| ||||| |||| | | ||| Sbjct: 2069 gaagacgagcttgctatacagaggctcgagaccacaaaaaatgaactgcgacaacgaatt 2128 Query: 134 gcaaaagagactggaggtaatgcaatcttacaggctagtttggaaagaagaaagcaagca 193 ||||| ||| | ||||||||||||| ||||||||||| ||||| ||||| || |||||| Sbjct: 2129 gcaaaggaggccagaggtaatgcaatattacaggctagcttggagagaaggaaacaagca 2188 Query: 194 ctgcatgagcgccgtttggtgctggaacaagatgtatcaaggttgcaagagcagctgcag 253 |||||||| || |||||| ||| ||||||||||| ||||| || |||||||||||||| Sbjct: 2189 ctgcatgaacgtcgtttgtcgcttgaacaagatgtgtcaagattacaagagcagctgcaa 2248 Query: 254 gctgaacgggatcttagagctgcattagaagttggattaagcatgtcttctgcacaatt 312 |||||| | ||||| |||| ||| | || ||||| || ||||||||||||| |||||| Sbjct: 2249 gctgaaagagatctccgagcagcactggaggttggtttgagcatgtcttctggacaatt 2307
>gb|BT002224.1| Arabidopsis thaliana At5g19390/F7K24_140 mRNA, complete cds Length = 2613 Score = 133 bits (67), Expect = 4e-28 Identities = 196/239 (82%) Strand = Plus / Plus Query: 74 gaagaagagcttgctatccaaaggcttgagatcgcaaagaatgatctgcaaatcaggatt 133 ||||| ||||||||||| || ||||| |||| | |||| ||||| |||| | | ||| Sbjct: 1708 gaagacgagcttgctatacagaggctcgagaccacaaaaaatgaactgcgacaacgaatt 1767 Query: 134 gcaaaagagactggaggtaatgcaatcttacaggctagtttggaaagaagaaagcaagca 193 ||||| ||| | ||||||||||||| ||||||||||| ||||| ||||| || |||||| Sbjct: 1768 gcaaaggaggccagaggtaatgcaatattacaggctagcttggagagaaggaaacaagca 1827 Query: 194 ctgcatgagcgccgtttggtgctggaacaagatgtatcaaggttgcaagagcagctgcag 253 |||||||| || |||||| ||| ||||||||||| ||||| || |||||||||||||| Sbjct: 1828 ctgcatgaacgtcgtttgtcgcttgaacaagatgtgtcaagattacaagagcagctgcaa 1887 Query: 254 gctgaacgggatcttagagctgcattagaagttggattaagcatgtcttctgcacaatt 312 |||||| | ||||| |||| ||| | || ||||| || ||||||||||||| |||||| Sbjct: 1888 gctgaaagagatctccgagcagcactggaggttggtttgagcatgtcttctggacaatt 1946
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 111 bits (56), Expect = 1e-21 Identities = 74/80 (92%) Strand = Plus / Plus Query: 230 tcaaggttgcaagagcagctgcaggctgaacgggatcttagagctgcattagaagttgga 289 |||||||||||||||||||| || |||||| | ||||||||||||||||| || |||||| Sbjct: 27666929 tcaaggttgcaagagcagctacaagctgaaagagatcttagagctgcattggaggttgga 27666988 Query: 290 ttaagcatgtcttctgcaca 309 |||||||||||||||||||| Sbjct: 27666989 ttaagcatgtcttctgcaca 27667008 Score = 95.6 bits (48), Expect = 8e-17 Identities = 75/84 (89%) Strand = Plus / Plus Query: 147 gaggtaatgcaatcttacaggctagtttggaaagaagaaagcaagcactgcatgagcgcc 206 |||| |||||||||||||| || ||||||||||||||||| |||||||| |||||||||| Sbjct: 27666637 gaggaaatgcaatcttacaagcaagtttggaaagaagaaaacaagcactacatgagcgcc 27666696 Query: 207 gtttggtgctggaacaagatgtat 230 |||||| ||||| || ||||||| Sbjct: 27666697 gtttggctctggagcaggatgtat 27666720 Score = 50.1 bits (25), Expect = 0.004 Identities = 52/61 (85%) Strand = Plus / Plus Query: 82 gcttgctatccaaaggcttgagatcgcaaagaatgatctgcaaatcaggattgcaaaaga 141 ||||||||||||||| || |||||| |||||||||| || || ||||| || || ||||| Sbjct: 27666493 gcttgctatccaaagactggagatcacaaagaatgacctccagatcagaatcgcgaaaga 27666552 Query: 142 g 142 | Sbjct: 27666553 g 27666553
>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0047B07 Length = 157797 Score = 111 bits (56), Expect = 1e-21 Identities = 74/80 (92%) Strand = Plus / Plus Query: 230 tcaaggttgcaagagcagctgcaggctgaacgggatcttagagctgcattagaagttgga 289 |||||||||||||||||||| || |||||| | ||||||||||||||||| || |||||| Sbjct: 123922 tcaaggttgcaagagcagctacaagctgaaagagatcttagagctgcattggaggttgga 123981 Query: 290 ttaagcatgtcttctgcaca 309 |||||||||||||||||||| Sbjct: 123982 ttaagcatgtcttctgcaca 124001 Score = 95.6 bits (48), Expect = 8e-17 Identities = 75/84 (89%) Strand = Plus / Plus Query: 147 gaggtaatgcaatcttacaggctagtttggaaagaagaaagcaagcactgcatgagcgcc 206 |||| |||||||||||||| || ||||||||||||||||| |||||||| |||||||||| Sbjct: 123630 gaggaaatgcaatcttacaagcaagtttggaaagaagaaaacaagcactacatgagcgcc 123689 Query: 207 gtttggtgctggaacaagatgtat 230 |||||| ||||| || ||||||| Sbjct: 123690 gtttggctctggagcaggatgtat 123713 Score = 50.1 bits (25), Expect = 0.004 Identities = 52/61 (85%) Strand = Plus / Plus Query: 82 gcttgctatccaaaggcttgagatcgcaaagaatgatctgcaaatcaggattgcaaaaga 141 ||||||||||||||| || |||||| |||||||||| || || ||||| || || ||||| Sbjct: 123486 gcttgctatccaaagactggagatcacaaagaatgacctccagatcagaatcgcgaaaga 123545 Query: 142 g 142 | Sbjct: 123546 g 123546
>dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1477_F01 Length = 158792 Score = 111 bits (56), Expect = 1e-21 Identities = 74/80 (92%) Strand = Plus / Plus Query: 230 tcaaggttgcaagagcagctgcaggctgaacgggatcttagagctgcattagaagttgga 289 |||||||||||||||||||| || |||||| | ||||||||||||||||| || |||||| Sbjct: 46031 tcaaggttgcaagagcagctacaagctgaaagagatcttagagctgcattggaggttgga 46090 Query: 290 ttaagcatgtcttctgcaca 309 |||||||||||||||||||| Sbjct: 46091 ttaagcatgtcttctgcaca 46110 Score = 95.6 bits (48), Expect = 8e-17 Identities = 75/84 (89%) Strand = Plus / Plus Query: 147 gaggtaatgcaatcttacaggctagtttggaaagaagaaagcaagcactgcatgagcgcc 206 |||| |||||||||||||| || ||||||||||||||||| |||||||| |||||||||| Sbjct: 45739 gaggaaatgcaatcttacaagcaagtttggaaagaagaaaacaagcactacatgagcgcc 45798 Query: 207 gtttggtgctggaacaagatgtat 230 |||||| ||||| || ||||||| Sbjct: 45799 gtttggctctggagcaggatgtat 45822 Score = 50.1 bits (25), Expect = 0.004 Identities = 52/61 (85%) Strand = Plus / Plus Query: 82 gcttgctatccaaaggcttgagatcgcaaagaatgatctgcaaatcaggattgcaaaaga 141 ||||||||||||||| || |||||| |||||||||| || || ||||| || || ||||| Sbjct: 45595 gcttgctatccaaagactggagatcacaaagaatgacctccagatcagaatcgcgaaaga 45654 Query: 142 g 142 | Sbjct: 45655 g 45655
>gb|AF296837.1|F7K24 Arabidopsis thaliana BAC F7K24 Length = 103024 Score = 85.7 bits (43), Expect = 8e-14 Identities = 73/83 (87%) Strand = Plus / Plus Query: 147 gaggtaatgcaatcttacaggctagtttggaaagaagaaagcaagcactgcatgagcgcc 206 ||||||||||||| ||||||||||| ||||| ||||| || |||||||||||||| || | Sbjct: 63704 gaggtaatgcaatattacaggctagcttggagagaaggaaacaagcactgcatgaacgtc 63763 Query: 207 gtttggtgctggaacaagatgta 229 ||||| ||| |||||||||||| Sbjct: 63764 gtttgtcgcttgaacaagatgta 63786 Score = 54.0 bits (27), Expect = 3e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 230 tcaaggttgcaagagcagctgcaggctgaacgggatcttagagctgcattagaagttgga 289 ||||| || |||||||||||||| |||||| | ||||| |||| ||| | || ||||| Sbjct: 63896 tcaagattacaagagcagctgcaagctgaaagagatctccgagcagcactggaggttggt 63955 Query: 290 ttaagcatgtcttctgcacaatt 312 || ||||||||||||| |||||| Sbjct: 63956 ttgagcatgtcttctggacaatt 63978
>gb|AC151537.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0087D01, complete sequence Length = 83225 Score = 83.8 bits (42), Expect = 3e-13 Identities = 72/82 (87%) Strand = Plus / Minus Query: 149 ggtaatgcaatcttacaggctagtttggaaagaagaaagcaagcactgcatgagcgccgt 208 ||||||||||| ||||||| |||||||||||||| || |||||||||||||| || ||| Sbjct: 31214 ggtaatgcaattctacaggcaagtttggaaagaaggaaacaagcactgcatgaacgtcgt 31155 Query: 209 ttggtgctggaacaagatgtat 230 |||| |||||||| ||||||| Sbjct: 31154 ttggccctggaacaggatgtat 31133 Score = 69.9 bits (35), Expect = 5e-09 Identities = 62/71 (87%) Strand = Plus / Minus Query: 233 aggttgcaagagcagctgcaggctgaacgggatcttagagctgcattagaagttggatta 292 |||||||||||||| || ||||| || | ||||||||||||||||| || |||||||| Sbjct: 30224 aggttgcaagagcaactacaggcagagagagatcttagagctgcattggaggttggattg 30165 Query: 293 agcatgtcttc 303 ||||||||||| Sbjct: 30164 agcatgtcttc 30154 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 82 gcttgctatccaaaggcttgagatcgcaaagaatgatctgcaaatcaggattgcaaaaga 141 ||||||||| |||||||| || || ||||||||||||||||| | ||| ||||| ||||| Sbjct: 31349 gcttgctattcaaaggctcgaaatagcaaagaatgatctgcagaacagaattgccaaaga 31290 Query: 142 g 142 | Sbjct: 31289 g 31289
>gb|AC151407.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0073M15, complete sequence Length = 143071 Score = 83.8 bits (42), Expect = 3e-13 Identities = 72/82 (87%) Strand = Plus / Minus Query: 149 ggtaatgcaatcttacaggctagtttggaaagaagaaagcaagcactgcatgagcgccgt 208 ||||||||||| ||||||| |||||||||||||| || |||||||||||||| || ||| Sbjct: 110113 ggtaatgcaattctacaggcaagtttggaaagaaggaaacaagcactgcatgaacgtcgt 110054 Query: 209 ttggtgctggaacaagatgtat 230 |||| |||||||| ||||||| Sbjct: 110053 ttggccctggaacaggatgtat 110032 Score = 69.9 bits (35), Expect = 5e-09 Identities = 62/71 (87%) Strand = Plus / Minus Query: 233 aggttgcaagagcagctgcaggctgaacgggatcttagagctgcattagaagttggatta 292 |||||||||||||| || ||||| || | ||||||||||||||||| || |||||||| Sbjct: 109123 aggttgcaagagcaactacaggcagagagagatcttagagctgcattggaggttggattg 109064 Query: 293 agcatgtcttc 303 ||||||||||| Sbjct: 109063 agcatgtcttc 109053 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 82 gcttgctatccaaaggcttgagatcgcaaagaatgatctgcaaatcaggattgcaaaaga 141 ||||||||| |||||||| || || ||||||||||||||||| | ||| ||||| ||||| Sbjct: 110248 gcttgctattcaaaggctcgaaatagcaaagaatgatctgcagaacagaattgccaaaga 110189 Query: 142 g 142 | Sbjct: 110188 g 110188
>emb|CT033769.2| Medicago truncatula chromosome 5 clone mte1-54l11, COMPLETE SEQUENCE Length = 127487 Score = 75.8 bits (38), Expect = 7e-11 Identities = 65/74 (87%) Strand = Plus / Plus Query: 230 tcaaggttgcaagagcagctgcaggctgaacgggatcttagagctgcattagaagttgga 289 ||||| |||||||| ||| |||| ||||| ||||||||||||||||||| |||||||| Sbjct: 2945 tcaagattgcaagaacagttgcaagctgagagggatcttagagctgcattggaagttggt 3004 Query: 290 ttaagcatgtcttc 303 || ||||||||||| Sbjct: 3005 ttgagcatgtcttc 3018
>gb|AC171735.1| Lycopersicon esculentum chromosome 11 clone C11HBa0119D16, complete sequence Length = 125830 Score = 48.1 bits (24), Expect = 0.017 Identities = 69/84 (82%) Strand = Plus / Plus Query: 147 gaggtaatgcaatcttacaggctagtttggaaagaagaaagcaagcactgcatgagcgcc 206 |||| |||||||| | ||||| || ||||| ||| | |||||||| |||||||||| | Sbjct: 3444 gaggaaatgcaattctgcaggcgagcttggagagacggaagcaagccttgcatgagcgtc 3503 Query: 207 gtttggtgctggaacaagatgtat 230 |||||| || ||||||||||||| Sbjct: 3504 gtttggctcttgaacaagatgtat 3527
>ref|XM_854508.1| PREDICTED: Canis familiaris similar to Restin (Cytoplasmic linker protein-170 alpha-2) (CLIP-170) (Reed-Sternberg intermediate filament associated protein), transcript variant 11 (LOC477461), mRNA Length = 5400 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Plus Query: 242 gagcagctgcaggctgaacgggatct 267 |||||||||| ||||||||||||||| Sbjct: 1201 gagcagctgctggctgaacgggatct 1226
>ref|XM_854467.1| PREDICTED: Canis familiaris similar to Restin (Cytoplasmic linker protein-170 alpha-2) (CLIP-170) (Reed-Sternberg intermediate filament associated protein), transcript variant 10 (LOC477461), mRNA Length = 5181 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Plus Query: 242 gagcagctgcaggctgaacgggatct 267 |||||||||| ||||||||||||||| Sbjct: 1093 gagcagctgctggctgaacgggatct 1118
>ref|XM_854442.1| PREDICTED: Canis familiaris similar to Restin (Cytoplasmic linker protein-170 alpha-2) (CLIP-170) (Reed-Sternberg intermediate filament associated protein), transcript variant 9 (LOC477461), mRNA Length = 5055 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Plus Query: 242 gagcagctgcaggctgaacgggatct 267 |||||||||| ||||||||||||||| Sbjct: 1201 gagcagctgctggctgaacgggatct 1226
>ref|XM_854404.1| PREDICTED: Canis familiaris similar to Restin (Cytoplasmic linker protein-170 alpha-2) (CLIP-170) (Reed-Sternberg intermediate filament associated protein), transcript variant 8 (LOC477461), mRNA Length = 4953 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Plus Query: 242 gagcagctgcaggctgaacgggatct 267 |||||||||| ||||||||||||||| Sbjct: 1093 gagcagctgctggctgaacgggatct 1118
>ref|XM_854295.1| PREDICTED: Canis familiaris similar to Restin (Cytoplasmic linker protein-170 alpha-2) (CLIP-170) (Reed-Sternberg intermediate filament associated protein), transcript variant 5 (LOC477461), mRNA Length = 5076 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Plus Query: 242 gagcagctgcaggctgaacgggatct 267 |||||||||| ||||||||||||||| Sbjct: 1201 gagcagctgctggctgaacgggatct 1226
>ref|XM_854258.1| PREDICTED: Canis familiaris similar to Restin (Cytoplasmic linker protein-170 alpha-2) (CLIP-170) (Reed-Sternberg intermediate filament associated protein), transcript variant 4 (LOC477461), mRNA Length = 3776 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Plus Query: 242 gagcagctgcaggctgaacgggatct 267 |||||||||| ||||||||||||||| Sbjct: 1201 gagcagctgctggctgaacgggatct 1226
>ref|XM_854226.1| PREDICTED: Canis familiaris similar to Restin (Cytoplasmic linker protein-170 alpha-2) (CLIP-170) (Reed-Sternberg intermediate filament associated protein), transcript variant 3 (LOC477461), mRNA Length = 5394 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Plus Query: 242 gagcagctgcaggctgaacgggatct 267 |||||||||| ||||||||||||||| Sbjct: 1201 gagcagctgctggctgaacgggatct 1226
>ref|XM_534659.2| PREDICTED: Canis familiaris similar to Restin (Cytoplasmic linker protein-170 alpha-2) (CLIP-170) (Reed-Sternberg intermediate filament associated protein), transcript variant 1 (LOC477461), mRNA Length = 4933 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Plus Query: 242 gagcagctgcaggctgaacgggatct 267 |||||||||| ||||||||||||||| Sbjct: 1201 gagcagctgctggctgaacgggatct 1226
>gb|AC091278.6| Mus musculus chromosome 1, clone RP23-294D6, complete sequence Length = 244656 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 gcaaaagagactggaggtaat 154 ||||||||||||||||||||| Sbjct: 102801 gcaaaagagactggaggtaat 102781
>gb|AC069200.6| Homo sapiens BAC clone RP11-177J6 from 4, complete sequence Length = 148930 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 caaagaatgatctgcaaatca 128 ||||||||||||||||||||| Sbjct: 27000 caaagaatgatctgcaaatca 26980
>gb|AC131673.4| Mus musculus BAC clone RP23-321P21 from 1, complete sequence Length = 262190 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 gcaaaagagactggaggtaat 154 ||||||||||||||||||||| Sbjct: 36874 gcaaaagagactggaggtaat 36894
>gb|AY515512.1| SARS coronavirus HC/SZ/61/03, complete genome Length = 29731 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10116 ggattaagcatgtcttctgc 10097
>gb|AY609081.1| Synthetic construct SARS coronavirus 3C-like protease gene, partial cds Length = 948 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 170 ggattaagcatgtcttctgc 151
>gb|AC168852.2| Mus musculus BAC clone RP24-191L21 from chromosome 6, complete sequence Length = 171677 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 ggtgctggaacaagatgtat 230 |||||||||||||||||||| Sbjct: 75973 ggtgctggaacaagatgtat 75992
>gb|AC116800.11| Mus musculus chromosome 8, clone RP24-335D17, complete sequence Length = 168912 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 gggatcttagagctgcattagaag 284 |||||||||||||||||| ||||| Sbjct: 134518 gggatcttagagctgcatgagaag 134541
>gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0496H07, complete sequence Length = 164477 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 gcaagagcagctgcaggctg 257 |||||||||||||||||||| Sbjct: 50181 gcaagagcagctgcaggctg 50200
>gb|AY714217.1| SARS Coronavirus CDC#200301157, complete genome Length = 29727 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10139 ggattaagcatgtcttctgc 10120
>gb|AY559097.1| SARS coronavirus Sin3408L, complete genome Length = 29715 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10124 ggattaagcatgtcttctgc 10105
>gb|AY559096.1| SARS coronavirus Sin850, complete genome Length = 29720 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10131 ggattaagcatgtcttctgc 10112
>gb|AY559095.1| SARS coronavirus Sin847, complete genome Length = 29719 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10129 ggattaagcatgtcttctgc 10110
>gb|AY559094.1| SARS coronavirus Sin846, complete genome Length = 29577 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10125 ggattaagcatgtcttctgc 10106
>gb|AY559093.1| SARS coronavirus Sin845, complete genome Length = 29712 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10123 ggattaagcatgtcttctgc 10104
>gb|AY559092.1| SARS coronavirus SinP5, complete genome Length = 29713 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10123 ggattaagcatgtcttctgc 10104
>gb|AY559091.1| SARS coronavirus SinP4, complete genome Length = 29710 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10123 ggattaagcatgtcttctgc 10104
>gb|AY559090.1| SARS coronavirus SinP3, complete genome Length = 29725 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10125 ggattaagcatgtcttctgc 10106
>gb|AY559089.1| SARS coronavirus SinP2, complete genome Length = 29717 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10123 ggattaagcatgtcttctgc 10104
>gb|AY559088.1| SARS coronavirus SinP1, complete genome Length = 29714 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10124 ggattaagcatgtcttctgc 10105
>gb|AY559087.1| SARS coronavirus Sin3725V, complete genome Length = 29716 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10123 ggattaagcatgtcttctgc 10104
>gb|AY559086.1| SARS coronavirus Sin849, complete genome Length = 29661 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10123 ggattaagcatgtcttctgc 10104
>gb|AY559085.1| SARS coronavirus Sin848, complete genome Length = 29713 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10123 ggattaagcatgtcttctgc 10104
>gb|AY559084.1| SARS coronavirus Sin3765V, complete genome Length = 29722 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10123 ggattaagcatgtcttctgc 10104
>gb|AY559083.1| SARS coronavirus Sin3408, complete genome Length = 29767 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10173 ggattaagcatgtcttctgc 10154
>gb|AY559082.1| SARS coronavirus Sin852, complete genome Length = 29670 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10138 ggattaagcatgtcttctgc 10119
>gb|AY559081.1| SARS coronavirus Sin842, complete genome Length = 29716 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10126 ggattaagcatgtcttctgc 10107
>gb|AY278741.1| SARS coronavirus Urbani, complete genome Length = 29727 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10139 ggattaagcatgtcttctgc 10120
>gb|AC108504.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1654_B10, complete sequence Length = 140282 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 gcaagagcagctgcaggctg 257 |||||||||||||||||||| Sbjct: 118200 gcaagagcagctgcaggctg 118219
>ref|XM_583422.2| PREDICTED: Bos taurus similar to cytoplasmic linker 2 isoform 1 (LOC506908), mRNA Length = 5261 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 agagcagctgcaggctgaacggga 264 ||||||||||| |||||||||||| Sbjct: 1197 agagcagctgctggctgaacggga 1220
>gb|AY595412.1| SARS coronavirus LLJ-2004, complete genome Length = 29716 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10117 ggattaagcatgtcttctgc 10098
>gb|DQ182595.1| SARS coronavirus ZJ0301 from China, complete genome Length = 29706 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10123 ggattaagcatgtcttctgc 10104
>gb|AY274119.3| SARS coronavirus TOR2, complete genome Length = 29751 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10139 ggattaagcatgtcttctgc 10120
>gb|AY323977.2| SARS coronavirus HSR 1, complete genome Length = 29751 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10139 ggattaagcatgtcttctgc 10120
>gb|AY534763.1|AY534762S2 SARS coronavirus Sin_WNV, partial sequence.~~ Length = 6768 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 2844 ggattaagcatgtcttctgc 2825
>gb|AY534758.1|AY534758S1 SARS coronavirus Sin0409, partial sequence.~~ Length = 14011 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 9594 ggattaagcatgtcttctgc 9575
>gb|AY291315.1| SARS coronavirus Frankfurt 1, complete genome Length = 29727 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10139 ggattaagcatgtcttctgc 10120
>gb|AY291451.1| SARS coronavirus TW1, complete genome Length = 29729 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10139 ggattaagcatgtcttctgc 10120
>gb|AY502932.1| SARS coronavirus TW9, complete genome Length = 29729 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10139 ggattaagcatgtcttctgc 10120
>gb|AY502931.1| SARS coronavirus TW8, complete genome Length = 29729 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10139 ggattaagcatgtcttctgc 10120
>gb|AY502930.1| SARS coronavirus TW7, complete genome Length = 29729 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10139 ggattaagcatgtcttctgc 10120
>gb|AY502929.1| SARS coronavirus TW6, complete genome Length = 29729 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10139 ggattaagcatgtcttctgc 10120
>gb|AY502928.1| SARS coronavirus TW5, complete genome Length = 29729 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10139 ggattaagcatgtcttctgc 10120
>gb|AY502927.1| SARS coronavirus TW4, complete genome Length = 29729 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10139 ggattaagcatgtcttctgc 10120
>gb|AY502926.1| SARS coronavirus TW3, complete genome Length = 29729 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10139 ggattaagcatgtcttctgc 10120
>gb|AY502925.1| SARS coronavirus TW2, complete genome Length = 29729 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10139 ggattaagcatgtcttctgc 10120
>gb|AY502924.1| SARS coronavirus TW11, complete genome Length = 29727 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10139 ggattaagcatgtcttctgc 10120
>gb|AY502923.1| SARS coronavirus TW10, complete genome Length = 29729 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10139 ggattaagcatgtcttctgc 10120
>gb|AY286320.4| SARS coronavirus ZJ01, partial genome Length = 26333 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10123 ggattaagcatgtcttctgc 10104
>gb|AY443088.1|AY443086S03 SARS coronavirus CUHK-L2 orf1ab polyprotein gene, partial cds Length = 3078 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 2324 ggattaagcatgtcttctgc 2305
>gb|AY390556.1| SARS coronavirus GZ02, complete genome Length = 29760 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10139 ggattaagcatgtcttctgc 10120
>gb|AY395004.1| SARS coronavirus HZS2-Bb, partial genome Length = 29620 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10092 ggattaagcatgtcttctgc 10073
>gb|AY395003.1| SARS coronavirus ZS-C, complete genome Length = 29647 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10088 ggattaagcatgtcttctgc 10069
>gb|AY395002.1| SARS coronavirus LC5, complete genome Length = 29350 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10124 ggattaagcatgtcttctgc 10105
>gb|AY395001.1| SARS coronavirus LC4, complete genome Length = 29350 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10124 ggattaagcatgtcttctgc 10105
>gb|AY395000.1| SARS coronavirus LC3, complete genome Length = 29350 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10124 ggattaagcatgtcttctgc 10105
>gb|AY394999.1| SARS coronavirus LC2, complete genome Length = 29350 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10124 ggattaagcatgtcttctgc 10105
>gb|AY394998.1| SARS coronavirus LC1, complete genome Length = 29736 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10124 ggattaagcatgtcttctgc 10105
>gb|AY394997.1| SARS coronavirus ZS-A, complete genome Length = 29683 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10124 ggattaagcatgtcttctgc 10105
>gb|AY394996.1| SARS coronavirus ZS-B, complete genome Length = 29683 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10124 ggattaagcatgtcttctgc 10105
>gb|AY394995.1| SARS coronavirus HSZ-Cc, complete genome Length = 29765 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10124 ggattaagcatgtcttctgc 10105
>gb|AY394994.1| SARS coronavirus HSZ-Bc, complete genome Length = 29765 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10124 ggattaagcatgtcttctgc 10105
>gb|AY394993.1| SARS coronavirus HGZ8L2, complete genome Length = 29736 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10124 ggattaagcatgtcttctgc 10105
>gb|AY394992.1| SARS coronavirus HZS2-C, complete genome Length = 29736 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10124 ggattaagcatgtcttctgc 10105
>gb|AY394991.1| SARS coronavirus HZS2-Fc, complete genome Length = 29736 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10124 ggattaagcatgtcttctgc 10105
>gb|AY394990.1| SARS coronavirus HZS2-E, complete genome Length = 29736 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10124 ggattaagcatgtcttctgc 10105
>gb|AY394989.1| SARS coronavirus HZS2-D, complete genome Length = 29736 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10124 ggattaagcatgtcttctgc 10105
>gb|AY394987.1| SARS coronavirus HZS2-Fb, complete genome Length = 29709 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10097 ggattaagcatgtcttctgc 10078
>gb|AY394986.1| SARS coronavirus HSZ-Cb, complete genome Length = 29729 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10088 ggattaagcatgtcttctgc 10069
>gb|AY394985.1| SARS coronavirus HSZ-Bb, complete genome Length = 29530 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 9889 ggattaagcatgtcttctgc 9870
>gb|AY394984.1| SARS coronavirus HSZ-A, partial genome Length = 29733 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10092 ggattaagcatgtcttctgc 10073
>gb|AY394983.1| SARS coronavirus HSZ2-A, complete genome Length = 29699 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10087 ggattaagcatgtcttctgc 10068
>gb|AY394982.1| SARS coronavirus HGZ8L1-B, partial genome Length = 29646 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10087 ggattaagcatgtcttctgc 10068
>gb|AY394981.1| SARS coronavirus HGZ8L1-A, partial genome Length = 29726 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10088 ggattaagcatgtcttctgc 10069
>gb|AY394980.1| SARS coronavirus GZ-D, partial genome Length = 29705 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10093 ggattaagcatgtcttctgc 10074
>gb|AY394979.1| SARS coronavirus GZ-C, complete genome Length = 29645 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10087 ggattaagcatgtcttctgc 10068
>gb|AY394978.1| SARS coronavirus GZ-B, complete genome Length = 29640 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10067 ggattaagcatgtcttctgc 10048
>gb|AY394977.1| SARS coronavirus GZ-A, partial genome Length = 29433 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10088 ggattaagcatgtcttctgc 10069
>gb|AY508724.1| SARS coronavirus NS-1, complete genome Length = 29732 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10123 ggattaagcatgtcttctgc 10104
>gb|AY463059.1| SARS coronavirus ShanghaiQXC1, complete genome Length = 29592 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10060 ggattaagcatgtcttctgc 10041
>gb|AY463060.1| SARS coronavirus ShanghaiQXC2, complete genome Length = 29013 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 9481 ggattaagcatgtcttctgc 9462
>gb|AC147133.2| Pan troglodytes BAC clone CH251-372A19 from Y, complete sequence Length = 192074 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 gcagctgcaggctgaacggg 263 |||||||||||||||||||| Sbjct: 168518 gcagctgcaggctgaacggg 168499
>gb|AY310120.1| SARS coronavirus FRA, complete genome Length = 29740 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10139 ggattaagcatgtcttctgc 10120
>gb|AY345988.1| SARS coronavirus CUHK-AG03, complete genome Length = 29736 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10124 ggattaagcatgtcttctgc 10105
>gb|AY345987.1| SARS coronavirus CUHK-AG02, complete genome Length = 29736 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10124 ggattaagcatgtcttctgc 10105
>gb|AY345986.1| SARS coronavirus CUHK-AG01, complete genome Length = 29736 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10124 ggattaagcatgtcttctgc 10105
>gb|AY461660.1| SARS coronavirus SoD, complete genome Length = 29715 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10124 ggattaagcatgtcttctgc 10105
>gb|AY282752.2| SARS coronavirus CUHK-Su10, complete genome Length = 29736 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10124 ggattaagcatgtcttctgc 10105
>gb|AY357076.1| SARS coronavirus PUMC03, complete genome Length = 29745 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10125 ggattaagcatgtcttctgc 10106
>gb|AY357075.1| SARS coronavirus PUMC02, complete genome Length = 29738 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10125 ggattaagcatgtcttctgc 10106
>gb|AY350750.1| SARS coronavirus PUMC01, complete genome Length = 29738 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10126 ggattaagcatgtcttctgc 10107
>gb|AC122841.4| Mus musculus BAC clone RP23-194E5 from 3, complete sequence Length = 200088 Score = 40.1 bits (20), Expect = 4.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 170 agtttggaaagaagaaagcaagcactgcatga 201 |||||||||||||||||| || ||||||||| Sbjct: 169542 agtttggaaagaagaaaggaaagactgcatga 169573
>gb|AY304495.1| SARS coronavirus GZ50, complete genome Length = 29720 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10124 ggattaagcatgtcttctgc 10105
>gb|AY304488.1| SARS coronavirus SZ16, complete genome Length = 29731 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10124 ggattaagcatgtcttctgc 10105
>gb|AY304486.1| SARS coronavirus SZ3, complete genome Length = 29741 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10124 ggattaagcatgtcttctgc 10105
>gb|AY427439.1| SARS coronavirus AS, complete genome Length = 29711 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10123 ggattaagcatgtcttctgc 10104
>gb|AY283798.2| SARS coronavirus Sin2774, complete genome Length = 29711 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10123 ggattaagcatgtcttctgc 10104
>gb|AY278491.2| SARS coronavirus HKU-39849, complete genome Length = 29742 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10139 ggattaagcatgtcttctgc 10120
>gb|AY278489.2| SARS coronavirus GD01, complete genome Length = 29757 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10123 ggattaagcatgtcttctgc 10104
>gb|AC182586.3| Pan troglodytes BAC clone CH251-499F21 from chromosome 9, complete sequence Length = 208237 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 gcaaagaatgatctgcaaatcagg 130 |||||||||||| ||||||||||| Sbjct: 198245 gcaaagaatgatttgcaaatcagg 198268
>emb|AL592287.4| Human DNA sequence from clone RP11-107P1 on chromosome 1, complete sequence Length = 189385 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 aggctagtttggaaagaaga 184 |||||||||||||||||||| Sbjct: 135738 aggctagtttggaaagaaga 135719
>emb|AL441886.18| Human DNA sequence from clone RP11-287G8 on chromosome 10 Contains the 5'end of gene KIAA1010, the 3'end of gene FLJ40792, the CPN1 gene for carboxypeptidase N, polypeptide 1, 50 kD and a CpG island, complete sequence Length = 135932 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 107 gcaaagaatgatctgcaaatcagg 130 |||||||||||| ||||||||||| Sbjct: 69714 gcaaagaatgatttgcaaatcagg 69691
>emb|AL390844.12| Human DNA sequence from clone RP11-255N24 on chromosome 9p13.3-21.3 Contains a CMT1A duplicated region transcript 15 (CDRT15) pseudogene, a pseudogene similar to part of solute carrier family 4 (anion exchanger), member 1, adaptor protein (SLC4A1AP), a novel pseudogene and a RNA binding motif protein, X chromosome (RBMX) (HNRPG) pseudogene, complete sequence Length = 163677 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 107 gcaaagaatgatctgcaaatcagg 130 |||||||||||| ||||||||||| Sbjct: 156125 gcaaagaatgatttgcaaatcagg 156102
>gb|AY362699.1| SARS coronavirus TWC3, complete genome Length = 29727 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10139 ggattaagcatgtcttctgc 10120
>gb|AY362698.1| SARS coronavirus TWC2, complete genome Length = 29727 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10139 ggattaagcatgtcttctgc 10120
>gb|AY283794.1| SARS coronavirus Sin2500, complete genome Length = 29711 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10123 ggattaagcatgtcttctgc 10104
>gb|AY283795.1| SARS coronavirus Sin2677, complete genome Length = 29705 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10123 ggattaagcatgtcttctgc 10104
>gb|AY283796.1| SARS coronavirus Sin2679, complete genome Length = 29711 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10123 ggattaagcatgtcttctgc 10104
>gb|AY283797.1| SARS coronavirus Sin2748, complete genome Length = 29706 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10123 ggattaagcatgtcttctgc 10104
>gb|AY278554.2| SARS coronavirus CUHK-W1, complete genome Length = 29736 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10124 ggattaagcatgtcttctgc 10105
>gb|AY322206.1|AY322205S2 SARS coronavirus Shanhgai LY orf1a polyprotein and orf1ab polyprotein genes, partial cds Length = 10546 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 4913 ggattaagcatgtcttctgc 4894
>emb|AL138787.11| Human DNA sequence from clone RP4-665N4 on chromosome 1p34.1-35.3 Contains the 3' end of the EIF2C3 gene for eukaryotic translation initiation factor 2C, 3, a putative novel transcript, a implantation-associated protein (DKFZp564K142) processed pseudogene, the TEKT2 gene for tektin 2 (testicular), the COL8A2 gene for collagen, type VIII, alpha 2, complete sequence Length = 128133 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 107 gcaaagaatgatctgcaaatcagg 130 |||||||||||| ||||||||||| Sbjct: 110160 gcaaagaatgatttgcaaatcagg 110137
>gb|AY321118.1| SARS coronavirus TWC, complete genome Length = 29725 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10139 ggattaagcatgtcttctgc 10120
>gb|AY279354.2| SARS coronavirus BJ04, complete genome Length = 29732 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10123 ggattaagcatgtcttctgc 10104
>gb|AY278490.3| SARS coronavirus BJ03, complete genome Length = 29740 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10135 ggattaagcatgtcttctgc 10116
>gb|AY278487.3| SARS coronavirus BJ02, complete genome Length = 29745 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10139 ggattaagcatgtcttctgc 10120
>gb|AY297028.1| SARS coronavirus ZJ01, complete genome Length = 29715 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10126 ggattaagcatgtcttctgc 10107
>gb|AY686863.1| SARS coronavirus A022, complete genome Length = 29499 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10088 ggattaagcatgtcttctgc 10069
>gb|AY686864.1| SARS coronavirus B039, complete genome Length = 29525 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10098 ggattaagcatgtcttctgc 10079
>dbj|BS000642.2| Pan troglodytes chromosome Y clone: PTB-307G08, complete sequence Length = 162472 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 gcagctgcaggctgaacggg 263 |||||||||||||||||||| Sbjct: 37905 gcagctgcaggctgaacggg 37886
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gcagctgcaggctgaacggg 263 |||||||||||||||||||| Sbjct: 18869501 gcagctgcaggctgaacggg 18869520
>gb|AY278488.2| SARS coronavirus BJ01, complete genome Length = 29725 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10120 ggattaagcatgtcttctgc 10101
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 gcaagagcagctgcaggctg 257 |||||||||||||||||||| Sbjct: 845758 gcaagagcagctgcaggctg 845777
>gb|AY394850.2| SARS coronavirus WHU, complete genome Length = 29728 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10139 ggattaagcatgtcttctgc 10120
>gb|AC068129.6| Homo sapiens BAC clone RP11-619F9 from 2, complete sequence Length = 150646 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 107 gcaaagaatgatctgcaaatcagg 130 |||||||||||| ||||||||||| Sbjct: 14136 gcaaagaatgatttgcaaatcagg 14113
>gb|AY074786.1| Oryza sativa dehydroascorbate reductase (DHAR) mRNA, complete cds Length = 1067 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gcaagagcagctgcaggctg 257 |||||||||||||||||||| Sbjct: 1044 gcaagagcagctgcaggctg 1025
>gb|AY338175.1| SARS coronavirus Taiwan TC2, complete genome Length = 29573 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10070 ggattaagcatgtcttctgc 10051
>gb|AY338174.1| SARS coronavirus Taiwan TC1, complete genome Length = 29573 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10070 ggattaagcatgtcttctgc 10051
>gb|AY348314.1| SARS coronavirus Taiwan TC3, complete genome Length = 29573 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10070 ggattaagcatgtcttctgc 10051
>gb|AC007284.4|AC007284 Homo sapiens BAC clone RP11-558K21 from Y, complete sequence Length = 171449 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aaagagactggaggtaatgc 156 |||||||||||||||||||| Sbjct: 151591 aaagagactggaggtaatgc 151572
>gb|AC135168.8| Homo sapiens, clone CTD-2025E19, complete sequence Length = 125231 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 107 gcaaagaatgatctgcaaatcagg 130 |||||||||||| ||||||||||| Sbjct: 46375 gcaaagaatgatttgcaaatcagg 46352
>gb|DQ071615.1| Bat SARS coronavirus Rp3, complete genome Length = 29736 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10133 ggattaagcatgtcttctgc 10114
>gb|AC146450.5| Pan troglodytes BAC clone clone CH251-552K12 from y, complete sequence Length = 172072 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 gcagctgcaggctgaacggg 263 |||||||||||||||||||| Sbjct: 83999 gcagctgcaggctgaacggg 83980
>gb|AC006371.2|AC006371 Homo sapiens BAC clone RP11-304C24 from Y, complete sequence Length = 202354 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gcagctgcaggctgaacggg 263 |||||||||||||||||||| Sbjct: 57930 gcagctgcaggctgaacggg 57949
>dbj|AK070895.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074C02, full insert sequence Length = 1198 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gcaagagcagctgcaggctg 257 |||||||||||||||||||| Sbjct: 1045 gcaagagcagctgcaggctg 1026
>gb|AY654624.1| SARS coronavirus TJF, complete genome Length = 29745 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10138 ggattaagcatgtcttctgc 10119
>dbj|AK061836.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-D08, full insert sequence Length = 1053 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gcaagagcagctgcaggctg 257 |||||||||||||||||||| Sbjct: 1049 gcaagagcagctgcaggctg 1030
>gb|AY772062.1| SARS coronavirus WH20, complete genome Length = 29461 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10149 ggattaagcatgtcttctgc 10130
>gb|AY545919.1| SARS coronavirus isolate CFB/SZ/94/03, complete genome Length = 29739 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10118 ggattaagcatgtcttctgc 10099
>gb|AY545918.1| SARS coronavirus isolate HC/GZ/32/03, complete genome Length = 29737 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10105 ggattaagcatgtcttctgc 10086
>gb|AY545917.1| SARS coronavirus isolate HC/GZ/81/03, complete genome Length = 29739 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10103 ggattaagcatgtcttctgc 10084
>gb|AY545916.1| SARS coronavirus isolate HC/SZ/266/03, complete genome Length = 29721 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10105 ggattaagcatgtcttctgc 10086
>gb|AY545915.1| SARS coronavirus isolate HC/SZ/DM1/03, complete genome Length = 29714 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10107 ggattaagcatgtcttctgc 10088
>gb|AY545914.1| SARS coronavirus isolate HC/SZ/79/03, complete genome Length = 29723 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10116 ggattaagcatgtcttctgc 10097
>gb|AY568539.1| SARS coronavirus GZ0401, complete genome Length = 29730 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10089 ggattaagcatgtcttctgc 10070
>gb|AY313906.1| SARS coronavirus GD69, complete genome Length = 29754 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10139 ggattaagcatgtcttctgc 10120
>gb|AY613950.1| SARS coronavirus PC4-227, complete genome Length = 29728 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10089 ggattaagcatgtcttctgc 10070
>gb|AY613949.1| SARS coronavirus PC4-136, complete genome Length = 29730 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10089 ggattaagcatgtcttctgc 10070
>gb|AY613948.1| SARS coronavirus PC4-13, complete genome Length = 29730 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10089 ggattaagcatgtcttctgc 10070
>gb|AY613947.1| SARS coronavirus GZ0402, complete genome Length = 29730 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10089 ggattaagcatgtcttctgc 10070
>emb|AL805963.23| Mouse DNA sequence from clone RP23-98K7 on chromosome X, complete sequence Length = 233546 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 aagaagaaagcaagcactgc 197 |||||||||||||||||||| Sbjct: 170935 aagaagaaagcaagcactgc 170916
>emb|AL844521.15| Zebrafish DNA sequence from clone DKEY-155O15 in linkage group 19, complete sequence Length = 213269 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 agaagaaagcaagcactgca 198 |||||||||||||||||||| Sbjct: 66778 agaagaaagcaagcactgca 66797
>gb|AC140238.3| Mus musculus BAC clone RP24-279O7 from 3, complete sequence Length = 174633 Score = 40.1 bits (20), Expect = 4.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 170 agtttggaaagaagaaagcaagcactgcatga 201 |||||||||||||||||| || ||||||||| Sbjct: 125879 agtttggaaagaagaaaggaaagactgcatga 125848
>dbj|AP006561.1| SARS coronavirus TWY genomic RNA, complete genome Length = 29727 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10139 ggattaagcatgtcttctgc 10120
>dbj|AP006560.1| SARS coronavirus TWS genomic RNA, complete genome Length = 29727 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10139 ggattaagcatgtcttctgc 10120
>dbj|AP006559.1| SARS coronavirus TWK genomic RNA, complete genome Length = 29727 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10139 ggattaagcatgtcttctgc 10120
>dbj|AP006558.1| SARS coronavirus TWJ genomic RNA, complete genome Length = 29725 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10139 ggattaagcatgtcttctgc 10120
>dbj|AP006557.1| SARS coronavirus TWH genomic RNA, complete genome Length = 29727 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10139 ggattaagcatgtcttctgc 10120
>gb|AY572038.1| SARS coronavirus civet020, complete genome Length = 29683 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10068 ggattaagcatgtcttctgc 10049
>gb|AY572035.1| SARS coronavirus civet010, complete genome Length = 29518 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10091 ggattaagcatgtcttctgc 10072
>gb|AY572034.1| SARS coronavirus civet007, complete genome Length = 29540 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10113 ggattaagcatgtcttctgc 10094
>gb|AY485278.1| SARS coronavirus Sino3-11, complete genome Length = 29740 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10139 ggattaagcatgtcttctgc 10120
>gb|AY485277.1| SARS coronavirus Sino1-11, complete genome Length = 29741 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10139 ggattaagcatgtcttctgc 10120
>dbj|AB257344.1| SARS coronavirus Frankfurt 1 genomic RNA, nearly complete genome, clone: persistent virus #21 Length = 29632 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ggattaagcatgtcttctgc 306 |||||||||||||||||||| Sbjct: 10098 ggattaagcatgtcttctgc 10079
>gb|AC092891.5| Homo sapiens 12 BAC RP11-495C19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 109440 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 107 gcaaagaatgatctgcaaatcagg 130 |||||||||||| ||||||||||| Sbjct: 70301 gcaaagaatgatttgcaaatcagg 70278
>dbj|AB037970.1| Oryza sativa (japonica cultivar-group) DHAR1 mRNA for GSH-dependent dehydroascorbate reductase 1, complete cds Length = 1044 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gcaagagcagctgcaggctg 257 |||||||||||||||||||| Sbjct: 1014 gcaagagcagctgcaggctg 995
>emb|AL833807.5| Mouse DNA sequence from clone RP23-305G2 on chromosome 2, complete sequence Length = 65071 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 aagaaagcaagcactgcatg 200 |||||||||||||||||||| Sbjct: 55318 aagaaagcaagcactgcatg 55337 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,961,867 Number of Sequences: 3902068 Number of extensions: 2961867 Number of successful extensions: 62061 Number of sequences better than 10.0: 193 Number of HSP's better than 10.0 without gapping: 193 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 61668 Number of HSP's gapped (non-prelim): 393 length of query: 313 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 291 effective length of database: 17,147,199,772 effective search space: 4989835133652 effective search space used: 4989835133652 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
