| Clone Name | bags32i08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY634576.1| Triticum aestivum SET domain protein mRNA, complete cds Length = 1440 Score = 611 bits (308), Expect = e-171 Identities = 472/527 (89%) Strand = Plus / Plus Query: 4 gatggcctctatagaatccaggagtcttggaaggagagaacaaagtttggcatcaactgc 63 |||||||| |||| ||||| ||||| |||| |||||||||||| |||||| |||| ||| Sbjct: 325 gatggcctttataagatccaagagtcctggacggagagaacaaaatttggcgtcaattgc 384 Query: 64 ttcaagtacaggctgcagcgtgaacctggacagcgtgatggagctgcgatatggaagagg 123 |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 385 ttcaagtacaggttgcagcgtgaacctggacagcgtgatggagctgcaatatggaagatg 444 Query: 124 acacagcgatggatacaaaatgcatcaacaagaggcacggttatacaacatgacctatca 183 || ||||||||||||||| || |||| |||||||||| |||||||| || |||||||||| Sbjct: 445 actcagcgatggatacaagatccatcgacaagaggcagggttatactacgtgacctatca 504 Query: 184 tctggggctgaaactttcccagtttgtgttgtcaatgaggtagagcatganaaaggacct 243 |||||| |||| | ||||||| ||| | |||||||||||||| ||||| ||||||||| Sbjct: 505 tctgggattgaatcgatcccagtgtgtctcgtcaatgaggtagaccatgagaaaggacct 564 Query: 244 gggcatttcacctatactactcaggtcaaatacccgagacccctcagctccatgaaagcc 303 ||||| ||||||||||||| ||||||||||||| ||||||| |||| ||||||| | || Sbjct: 565 gggcagttcacctatactaatcaggtcaaatacttgagacccgtcagttccatgacaccc 624 Query: 304 ttgcagggttgcggttgccagagtgtttgcctacccggcgatgcaaactgtgcttgtggg 363 |||||||||| ||||||||||||||||||||||| || ||||| ||||||||||||||| Sbjct: 625 atgcagggttgtggttgccagagtgtttgcctacctggtgatgccaactgtgcttgtggg 684 Query: 364 caacataatggaggtgatctaccgtacagctcagcaggagtgttggtgtgccgcaagcca 423 |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 685 caacataacggaggtgatctaccgtacagctcatcaggagtgttggtgtgccgcaagcca 744 Query: 424 gtaatatatgaatgtggtgaagcttgccattgctccctgaattgtcggaacagagtaagc 483 || |||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 745 atagtatatgaatgtggtgaagcttgccattgtaccctgaattgtcggaacagagtgagc 804 Query: 484 caaaagggggtcaggtgtcactttgaggtcttcaggaccacaaatcg 530 ||||| ||| |||||| |||||||||||||||||||| ||||||| Sbjct: 805 caaaaagggatcaggttccactttgaggtcttcaggacggcaaatcg 851
>ref|XM_475460.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2019 Score = 404 bits (204), Expect = e-109 Identities = 446/527 (84%) Strand = Plus / Plus Query: 4 gatggcctctatagaatccaggagtcttggaaggagagaacaaagtttggcatcaactgc 63 ||||||||||||| || |||||||| ||||||||||||||||||| ||| ||||| ||| Sbjct: 1009 gatggcctctataagattcaggagtcctggaaggagagaacaaagtctggtatcaattgc 1068 Query: 64 ttcaagtacaggctgcagcgtgaacctggacagcgtgatggagctgcgatatggaagagg 123 |||||||||| |||| |||||| |||||||||| |||||||||||| | ||||||| | Sbjct: 1069 ttcaagtacaaactgctgcgtgagcctggacagcctgatggagctgcattgtggaagatg 1128 Query: 124 acacagcgatggatacaaaatgcatcaacaagaggcacggttatacaacatgacctatca 183 || || |||||||| | ||| || ||| ||||||| ||||||| || ||| |||||| Sbjct: 1129 actcaaggatggatagacaatccagcaagcagaggcagggttatattacctgatctatca 1188 Query: 184 tctggggctgaaactttcccagtttgtgttgtcaatgaggtagagcatganaaaggacct 243 |||| ||||||| || |||||||||| |||||||||||||||| ||||| ||||||||| Sbjct: 1189 tctgcggctgaagctctcccagtttgccttgtcaatgaggtagaccatgagaaaggacct 1248 Query: 244 gggcatttcacctatactactcaggtcaaatacccgagacccctcagctccatgaaagcc 303 ||||||||||||||| | | ||| ||||||||| ||| |||||||| || |||||| || Sbjct: 1249 gggcatttcacctatgccagtcaagtcaaatacttgaggcccctcagttctatgaaaccc 1308 Query: 304 ttgcagggttgcggttgccagagtgtttgcctacccggcgatgcaaactgtgcttgtggg 363 || ||||||||||| ||||||||||||||||| || || ||| | |||||||||||||| Sbjct: 1309 ttacagggttgcggatgccagagtgtttgcctgcctggtgatcccaactgtgcttgtgga 1368 Query: 364 caacataatggaggtgatctaccgtacagctcagcaggagtgttggtgtgccgcaagcca 423 |||||||| |||||||| |||| ||||||||| ||||| | |||| ||||||||||||| Sbjct: 1369 caacataacggaggtgacttaccttacagctcatcaggacttttggcgtgccgcaagcca 1428 Query: 424 gtaatatatgaatgtggtgaagcttgccattgctccctgaattgtcggaacagagtaagc 483 |||| |||||||| ||||| ||||||||||| | |||||| ||||||||||| | | Sbjct: 1429 ataatttatgaatgcggtgatgcttgccattgtactacgaattgccggaacagagtgacc 1488 Query: 484 caaaagggggtcaggtgtcactttgaggtcttcaggaccacaaatcg 530 ||||| |||||||| | |||||||||||||||| |||| ||||||| Sbjct: 1489 caaaaaggggtcagatttcactttgaggtcttccggactgcaaatcg 1535
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06, complete sequence Length = 187651 Score = 404 bits (204), Expect = e-109 Identities = 446/527 (84%) Strand = Plus / Minus Query: 4 gatggcctctatagaatccaggagtcttggaaggagagaacaaagtttggcatcaactgc 63 ||||||||||||| || |||||||| ||||||||||||||||||| ||| ||||| ||| Sbjct: 41184 gatggcctctataagattcaggagtcctggaaggagagaacaaagtctggtatcaattgc 41125 Query: 64 ttcaagtacaggctgcagcgtgaacctggacagcgtgatggagctgcgatatggaagagg 123 |||||||||| |||| |||||| |||||||||| |||||||||||| | ||||||| | Sbjct: 41124 ttcaagtacaaactgctgcgtgagcctggacagcctgatggagctgcattgtggaagatg 41065 Query: 124 acacagcgatggatacaaaatgcatcaacaagaggcacggttatacaacatgacctatca 183 || || |||||||| | ||| || ||| ||||||| ||||||| || ||| |||||| Sbjct: 41064 actcaaggatggatagacaatccagcaagcagaggcagggttatattacctgatctatca 41005 Query: 184 tctggggctgaaactttcccagtttgtgttgtcaatgaggtagagcatganaaaggacct 243 |||| ||||||| || |||||||||| |||||||||||||||| ||||| ||||||||| Sbjct: 41004 tctgcggctgaagctctcccagtttgccttgtcaatgaggtagaccatgagaaaggacct 40945 Query: 244 gggcatttcacctatactactcaggtcaaatacccgagacccctcagctccatgaaagcc 303 ||||||||||||||| | | ||| ||||||||| ||| |||||||| || |||||| || Sbjct: 40944 gggcatttcacctatgccagtcaagtcaaatacttgaggcccctcagttctatgaaaccc 40885 Query: 304 ttgcagggttgcggttgccagagtgtttgcctacccggcgatgcaaactgtgcttgtggg 363 || ||||||||||| ||||||||||||||||| || || ||| | |||||||||||||| Sbjct: 40884 ttacagggttgcggatgccagagtgtttgcctgcctggtgatcccaactgtgcttgtgga 40825 Query: 364 caacataatggaggtgatctaccgtacagctcagcaggagtgttggtgtgccgcaagcca 423 |||||||| |||||||| |||| ||||||||| ||||| | |||| ||||||||||||| Sbjct: 40824 caacataacggaggtgacttaccttacagctcatcaggacttttggcgtgccgcaagcca 40765 Query: 424 gtaatatatgaatgtggtgaagcttgccattgctccctgaattgtcggaacagagtaagc 483 |||| |||||||| ||||| ||||||||||| | |||||| ||||||||||| | | Sbjct: 40764 ataatttatgaatgcggtgatgcttgccattgtactacgaattgccggaacagagtgacc 40705 Query: 484 caaaagggggtcaggtgtcactttgaggtcttcaggaccacaaatcg 530 ||||| |||||||| | |||||||||||||||| |||| ||||||| Sbjct: 40704 caaaaaggggtcagatttcactttgaggtcttccggactgcaaatcg 40658
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 404 bits (204), Expect = e-109 Identities = 446/527 (84%) Strand = Plus / Minus Query: 4 gatggcctctatagaatccaggagtcttggaaggagagaacaaagtttggcatcaactgc 63 ||||||||||||| || |||||||| ||||||||||||||||||| ||| ||||| ||| Sbjct: 23972695 gatggcctctataagattcaggagtcctggaaggagagaacaaagtctggtatcaattgc 23972636 Query: 64 ttcaagtacaggctgcagcgtgaacctggacagcgtgatggagctgcgatatggaagagg 123 |||||||||| |||| |||||| |||||||||| |||||||||||| | ||||||| | Sbjct: 23972635 ttcaagtacaaactgctgcgtgagcctggacagcctgatggagctgcattgtggaagatg 23972576 Query: 124 acacagcgatggatacaaaatgcatcaacaagaggcacggttatacaacatgacctatca 183 || || |||||||| | ||| || ||| ||||||| ||||||| || ||| |||||| Sbjct: 23972575 actcaaggatggatagacaatccagcaagcagaggcagggttatattacctgatctatca 23972516 Query: 184 tctggggctgaaactttcccagtttgtgttgtcaatgaggtagagcatganaaaggacct 243 |||| ||||||| || |||||||||| |||||||||||||||| ||||| ||||||||| Sbjct: 23972515 tctgcggctgaagctctcccagtttgccttgtcaatgaggtagaccatgagaaaggacct 23972456 Query: 244 gggcatttcacctatactactcaggtcaaatacccgagacccctcagctccatgaaagcc 303 ||||||||||||||| | | ||| ||||||||| ||| |||||||| || |||||| || Sbjct: 23972455 gggcatttcacctatgccagtcaagtcaaatacttgaggcccctcagttctatgaaaccc 23972396 Query: 304 ttgcagggttgcggttgccagagtgtttgcctacccggcgatgcaaactgtgcttgtggg 363 || ||||||||||| ||||||||||||||||| || || ||| | |||||||||||||| Sbjct: 23972395 ttacagggttgcggatgccagagtgtttgcctgcctggtgatcccaactgtgcttgtgga 23972336 Query: 364 caacataatggaggtgatctaccgtacagctcagcaggagtgttggtgtgccgcaagcca 423 |||||||| |||||||| |||| ||||||||| ||||| | |||| ||||||||||||| Sbjct: 23972335 caacataacggaggtgacttaccttacagctcatcaggacttttggcgtgccgcaagcca 23972276 Query: 424 gtaatatatgaatgtggtgaagcttgccattgctccctgaattgtcggaacagagtaagc 483 |||| |||||||| ||||| ||||||||||| | |||||| ||||||||||| | | Sbjct: 23972275 ataatttatgaatgcggtgatgcttgccattgtactacgaattgccggaacagagtgacc 23972216 Query: 484 caaaagggggtcaggtgtcactttgaggtcttcaggaccacaaatcg 530 ||||| |||||||| | |||||||||||||||| |||| ||||||| Sbjct: 23972215 caaaaaggggtcagatttcactttgaggtcttccggactgcaaatcg 23972169
>dbj|AK069035.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004N15, full insert sequence Length = 2721 Score = 404 bits (204), Expect = e-109 Identities = 446/527 (84%) Strand = Plus / Plus Query: 4 gatggcctctatagaatccaggagtcttggaaggagagaacaaagtttggcatcaactgc 63 ||||||||||||| || |||||||| ||||||||||||||||||| ||| ||||| ||| Sbjct: 1288 gatggcctctataagattcaggagtcctggaaggagagaacaaagtctggtatcaattgc 1347 Query: 64 ttcaagtacaggctgcagcgtgaacctggacagcgtgatggagctgcgatatggaagagg 123 |||||||||| |||| |||||| |||||||||| |||||||||||| | ||||||| | Sbjct: 1348 ttcaagtacaaactgctgcgtgagcctggacagcctgatggagctgcattgtggaagatg 1407 Query: 124 acacagcgatggatacaaaatgcatcaacaagaggcacggttatacaacatgacctatca 183 || || |||||||| | ||| || ||| ||||||| ||||||| || ||| |||||| Sbjct: 1408 actcaaggatggatagacaatccagcaagcagaggcagggttatattacctgatctatca 1467 Query: 184 tctggggctgaaactttcccagtttgtgttgtcaatgaggtagagcatganaaaggacct 243 |||| ||||||| || |||||||||| |||||||||||||||| ||||| ||||||||| Sbjct: 1468 tctgcggctgaagctctcccagtttgccttgtcaatgaggtagaccatgagaaaggacct 1527 Query: 244 gggcatttcacctatactactcaggtcaaatacccgagacccctcagctccatgaaagcc 303 ||||||||||||||| | | ||| ||||||||| ||| |||||||| || |||||| || Sbjct: 1528 gggcatttcacctatgccagtcaagtcaaatacttgaggcccctcagttctatgaaaccc 1587 Query: 304 ttgcagggttgcggttgccagagtgtttgcctacccggcgatgcaaactgtgcttgtggg 363 || ||||||||||| ||||||||||||||||| || || ||| | |||||||||||||| Sbjct: 1588 ttacagggttgcggatgccagagtgtttgcctgcctggtgatcccaactgtgcttgtgga 1647 Query: 364 caacataatggaggtgatctaccgtacagctcagcaggagtgttggtgtgccgcaagcca 423 |||||||| |||||||| |||| ||||||||| ||||| | |||| ||||||||||||| Sbjct: 1648 caacataacggaggtgacttaccttacagctcatcaggacttttggcgtgccgcaagcca 1707 Query: 424 gtaatatatgaatgtggtgaagcttgccattgctccctgaattgtcggaacagagtaagc 483 |||| |||||||| ||||| ||||||||||| | |||||| ||||||||||| | | Sbjct: 1708 ataatttatgaatgcggtgatgcttgccattgtactacgaattgccggaacagagtgacc 1767 Query: 484 caaaagggggtcaggtgtcactttgaggtcttcaggaccacaaatcg 530 ||||| |||||||| | |||||||||||||||| |||| ||||||| Sbjct: 1768 caaaaaggggtcagatttcactttgaggtcttccggactgcaaatcg 1814
>gb|AY459341.1| Oryza sativa (japonica cultivar-group) clone CL031105.6 R2R3-MYB gene region Length = 58956 Score = 400 bits (202), Expect = e-108 Identities = 445/527 (84%) Strand = Plus / Plus Query: 4 gatggcctctatagaatccaggagtcttggaaggagagaacaaagtttggcatcaactgc 63 ||||||||||||| || |||||||| ||||||||||||||||||| ||| ||||| ||| Sbjct: 39714 gatggcctctataagattcaggagtcctggaaggagagaacaaagtctggtatcaattgc 39773 Query: 64 ttcaagtacaggctgcagcgtgaacctggacagcgtgatggagctgcgatatggaagagg 123 |||||||||| |||| |||||| |||||||||| |||||||||||| | ||||||| | Sbjct: 39774 ttcaagtacaaactgctgcgtgagcctggacagcctgatggagctgcattgtggaagatg 39833 Query: 124 acacagcgatggatacaaaatgcatcaacaagaggcacggttatacaacatgacctatca 183 || || |||||||| | ||| || ||| ||||||| ||||||| || ||| |||||| Sbjct: 39834 actcaaggatggatagacaatccagcaagcagaggcagggttatattacctgatctatca 39893 Query: 184 tctggggctgaaactttcccagtttgtgttgtcaatgaggtagagcatganaaaggacct 243 |||| ||||||| || |||||||||| |||||||||||||||| ||||| ||||||||| Sbjct: 39894 tctgcggctgaagctctcccagtttgccttgtcaatgaggtagaccatgagaaaggacct 39953 Query: 244 gggcatttcacctatactactcaggtcaaatacccgagacccctcagctccatgaaagcc 303 ||||||||||||||| | | ||| ||||||||| ||| |||||||| || |||||| || Sbjct: 39954 gggcatttcacctatgccagtcaagtcaaatacttgaggcccctcagttctatgaaaccc 40013 Query: 304 ttgcagggttgcggttgccagagtgtttgcctacccggcgatgcaaactgtgcttgtggg 363 || ||||||||||| ||||||||||||||||| || || ||| | |||||||||||||| Sbjct: 40014 ttacagggttgcggatgccagagtgtttgcctgcctggtgatcccaactgtgcttgtgga 40073 Query: 364 caacataatggaggtgatctaccgtacagctcagcaggagtgttggtgtgccgcaagcca 423 |||||||| |||||||| |||| ||||||||| ||||| | |||| ||||||||||||| Sbjct: 40074 caacataacggaggtgacttaccttacagctcatcaggacttttggcgtgccgcaagcca 40133 Query: 424 gtaatatatgaatgtggtgaagcttgccattgctccctgaattgtcggaacagagtaagc 483 |||| |||||||| |||| ||||||||||| | |||||| ||||||||||| | | Sbjct: 40134 ataatttatgaatgcggtgrtgcttgccattgtactacgaattgccggaacagagtgacc 40193 Query: 484 caaaagggggtcaggtgtcactttgaggtcttcaggaccacaaatcg 530 ||||| |||||||| | |||||||||||||||| |||| ||||||| Sbjct: 40194 caaaaaggggtcagatttcactttgaggtcttccggactgcaaatcg 40240
>gb|AY596552.1| Saccharum officinarum clone SCCCRZ2001G10, complete sequence Length = 2562 Score = 301 bits (152), Expect = 1e-78 Identities = 433/527 (82%) Strand = Plus / Minus Query: 4 gatggcctctatagaatccaggagtcttggaaggagagaacaaagtttggcatcaactgc 63 ||||||||||| | || || ||||| |||||||||||||||| || ||| ||| | ||| Sbjct: 1462 gatggcctctacaagattcatgagtcctggaaggagagaacaaggtctggtatccattgc 1403 Query: 64 ttcaagtacaggctgcagcgtgaacctggacagcgtgatggagctgcgatatggaagagg 123 |||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||| | Sbjct: 1402 ttcaagtacaagctgctgcgtgaacctggacagcgtgatggagctgcattatggaagatg 1343 Query: 124 acacagcgatggatacaaaatgcatcaacaagaggcacggttatacaacatgacctatca 183 || ||| |||||||| | ||| | | || ||||||| ||| ||| | ||| || ||| Sbjct: 1342 actcagagatggatagataatcctgctaccagaggcagtgttctactagctgatctgtca 1283 Query: 184 tctggggctgaaactttcccagtttgtgttgtcaatgaggtagagcatganaaaggacct 243 ||| |||||||||| | ||||||||| |||||||||||||||| ||||| ||||||||| Sbjct: 1282 tctaaggctgaaactgtgccagtttgtcttgtcaatgaggtagaccatgagaaaggacct 1223 Query: 244 gggcatttcacctatactactcaggtcaaatacccgagacccctcagctccatgaaagcc 303 || |||||||||||||||| ||||||||||||| ||| || ||||| || |||||| Sbjct: 1222 ggacatttcacctatactaatcaggtcaaatacttgaggcctctcagttctatgaaaaag 1163 Query: 304 ttgcagggttgcggttgccagagtgtttgcctacccggcgatgcaaactgtgcttgtggg 363 |||||||| || || ||||||||||||||||| || || ||||| | ||||||||||| Sbjct: 1162 ttgcagggctgtggatgccagagtgtttgcctgcctggtgatgccagttgtgcttgtgga 1103 Query: 364 caacataatggaggtgatctaccgtacagctcagcaggagtgttggtgtgccgcaagcca 423 |||||||||||||||||| |||| ||||| || |||| ||||| |||||||| || Sbjct: 1102 caacataatggaggtgatttaccctacagttcgttaggattgttgtcatgccgcaaaccg 1043 Query: 424 gtaatatatgaatgtggtgaagcttgccattgctccctgaattgtcggaacagagtaagc 483 | || ||||||||||||||| ||||| | || || ||||| ||||||||||| | | Sbjct: 1042 atgatctatgaatgtggtgaatcttgcaactgttctacaaattgccggaacagagtgacc 983 Query: 484 caaaagggggtcaggtgtcactttgaggtcttcaggaccacaaatcg 530 ||||| |||| |||| || |||||||||||||||||||| ||||| Sbjct: 982 caaaaaggggccaggctacattttgaggtcttcaggaccaccaatcg 936
>gb|AY187718.2| Zea mays SET domain protein SDG111 mRNA, complete cds Length = 2413 Score = 254 bits (128), Expect = 3e-64 Identities = 427/527 (81%) Strand = Plus / Plus Query: 4 gatggcctctatagaatccaggagtcttggaaggagagaacaaagtttggcatcaactgc 63 |||||||| || | ||| || ||||| |||||||||| ||||| || ||| ||||| ||| Sbjct: 1019 gatggcctgtacaaaattcatgagtcctggaaggagaaaacaaggtctggtatcaattgc 1078 Query: 64 ttcaagtacaggctgcagcgtgaacctggacagcgtgatggagctgcgatatggaagagg 123 |||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||| | Sbjct: 1079 ttcaagtacaagctgctgcgtgaacctggacagcgtgatggagctgcattatggaagatg 1138 Query: 124 acacagcgatggatacaaaatgcatcaacaagaggcacggttatacaacatgacctatca 183 || ||| ||||||| | || | | || ||||||| |||| ||| | ||| || ||| Sbjct: 1139 actcagaaatggatagatgatcctgctaccagaggcagggttctactagctgatctgtca 1198 Query: 184 tctggggctgaaactttcccagtttgtgttgtcaatgaggtagagcatganaaaggacct 243 ||| |||||||||| | ||||||| | ||||||||||||| || ||||| ||||||||| Sbjct: 1199 tctaaggctgaaactattccagtttctcttgtcaatgaggttgaccatgagaaaggacct 1258 Query: 244 gggcatttcacctatactactcaggtcaaatacccgagacccctcagctccatgaaagcc 303 | |||||||||||||||| |||||||||||| ||| || ||||| || |||||| Sbjct: 1259 gcacatttcacctatactaaccaggtcaaatacgtgaggcctctcagttctatgaaaaag 1318 Query: 304 ttgcagggttgcggttgccagagtgtttgcctacccggcgatgcaaactgtgcttgtggg 363 ||||||| || || ||||||||||||||||| ||||| ||||| | ||||||||||| Sbjct: 1319 ctgcagggctgtggatgccagagtgtttgcctgcccggtgatgccagttgtgcttgtgga 1378 Query: 364 caacataatggaggtgatctaccgtacagctcagcaggagtgttggtgtgccgcaagcca 423 |||||||||||||||||| |||| ||||| ||| |||| | ||| |||||||| || Sbjct: 1379 caacataatggaggtgatttaccctacagttcattaggattattgtcatgccgcaaaccg 1438 Query: 424 gtaatatatgaatgtggtgaagcttgccattgctccctgaattgtcggaacagagtaagc 483 | || ||||||||||||||| ||||| | || || ||||| ||||||||||| | | Sbjct: 1439 atgatctatgaatgtggtgaatcttgcaactgttctacaaattgccggaacagagtgacc 1498 Query: 484 caaaagggggtcaggtgtcactttgaggtcttcaggaccacaaatcg 530 ||||| ||| |||| || |||||||||||||||||||| ||||| Sbjct: 1499 caaaaagggcccaggctacattttgaggtcttcaggaccaccaatcg 1545
>gb|AY093419.1| Zea mays SET domain protein 105 (set105) mRNA, complete cds Length = 2487 Score = 228 bits (115), Expect = 1e-56 Identities = 408/506 (80%) Strand = Plus / Plus Query: 25 gagtcttggaaggagagaacaaagtttggcatcaactgcttcaagtacaggctgcagcgt 84 ||||| ||||||||||||||||||| || |||| ||||||||||||| ||||| ||| Sbjct: 1162 gagtcctggaaggagagaacaaagtacggtgtcaattgcttcaagtacaagctgctgcgg 1221 Query: 85 gaacctggacagcgtgatggagctgcgatatggaagaggacacagcgatggatacaaaat 144 |||||||||||||||||||||||||| ||||||||| ||| ||| |||||||| | ||| Sbjct: 1222 gaacctggacagcgtgatggagctgcattatggaagatgactcagagatggatagataat 1281 Query: 145 gcatcaacaagaggcacggttatacaacatgacctatcatctggggctgaaactttccca 204 | | || ||||||| ||| ||| | ||| || |||||| |||||||| ||| || Sbjct: 1282 cctgctaccagaggcagggtcctactagctgatctgtcatctaaggctgaaattttgcct 1341 Query: 205 gtttgtgttgtcaatgaggtagagcatganaaaggacctgggcatttcacctatactact 264 |||||| | |||||||||||||| ||||| |||||||||| |||||||| ||||||| | Sbjct: 1342 gtttgtctcgtcaatgaggtagaccatgagaaaggacctgtacatttcacttatactaat 1401 Query: 265 caggtcaaatacccgagacccctcagctccatgaaagccttgcagggttgcggttgccag 324 |||||||||||| ||| || ||||| || |||||| |||||||| || || |||||| Sbjct: 1402 caggtcaaatacttgaggcctctcagttctatgaaaaagttgcagggctgtggatgccag 1461 Query: 325 agtgtttgcctacccggcgatgcaaactgtgcttgtgggcaacataatggaggtgatcta 384 || |||||| | || ||||| || | ||||||||||| |||||||||||||| ||| || Sbjct: 1462 agcgtttgcttgcctggcgacgccagttgtgcttgtggacaacataatggaggcgattta 1521 Query: 385 ccgtacagctcagcaggagtgttggtgtgccgcaagccagtaatatatgaatgtggtgaa 444 || | ||| ||| ||||| ||||| |||||||| ||| || | || |||||||||||| Sbjct: 1522 cccttcagttcatcaggattgttgtcatgccgcaaaccaatagtctacgaatgtggtgaa 1581 Query: 445 gcttgccattgctccctgaattgtcggaacagagtaagccaaaagggggtcaggtgtcac 504 ||||| | || || ||||| |||||||||| | |||||| ||| |||| || Sbjct: 1582 tcttgcaactgttctacaaattgcaggaacagagtgacccaaaaagggtccaggctacat 1641 Query: 505 tttgaggtcttcaggaccacaaatcg 530 || ||||||||||||||||||||||| Sbjct: 1642 ttcgaggtcttcaggaccacaaatcg 1667
>gb|AY109913.1| Zea mays CL3507_1 mRNA sequence Length = 1269 Score = 143 bits (72), Expect = 7e-31 Identities = 213/262 (81%) Strand = Plus / Minus Query: 189 ggctgaaactttcccagtttgtgttgtcaatgaggtagagcatganaaaggacctgggca 248 |||||||||| | ||||||| | ||||||||||||| || ||||| |||||||||| || Sbjct: 1206 ggctgaaactattccagtttctcttgtcaatgaggttgaccatgagaaaggacctgcaca 1147 Query: 249 tttcacctatactactcaggtcaaatacccgagacccctcagctccatgaaagccttgca 308 |||||||||||||| |||||||||||| ||| || ||||| || ||| |||| Sbjct: 1146 tttcacctatactaaccaggtcaaatacgtgaggcctctcagttctatgnnnnngctgca 1087 Query: 309 gggttgcggttgccagagtgtttgcctacccggcgatgcaaactgtgcttgtgggcaaca 368 ||| || || ||||||||||||||||| ||||| ||||| | ||||||||||| ||||| Sbjct: 1086 gggctgtggatgccagagtgtttgcctgcccggtgatgccagttgtgcttgtggacaaca 1027 Query: 369 taatggaggtgatctaccgtacagctcagcaggagtgttggtgtgccgcaagccagtaat 428 ||||||||||||| |||| ||||| ||| |||| | ||| |||||||| || | || Sbjct: 1026 taatggaggtgatttaccctacagttcattaggattattgtcatgccgcaaaccgatgat 967 Query: 429 atatgaatgtggtgaagcttgc 450 ||||||||||||||| ||||| Sbjct: 966 ctatgaatgtggtgaatcttgc 945
>gb|BT024023.1| Zea mays clone EL01N0414B01 mRNA sequence Length = 1607 Score = 117 bits (59), Expect = 4e-23 Identities = 116/135 (85%) Strand = Plus / Plus Query: 4 gatggcctctatagaatccaggagtcttggaaggagagaacaaagtttggcatcaactgc 63 |||||||| || | ||| || ||||| |||||||||| ||||| || ||| ||||| ||| Sbjct: 217 gatggcctgtacaaaattcatgagtcctggaaggagaaaacaaggtctggtatcaattgc 276 Query: 64 ttcaagtacaggctgcagcgtgaacctggacagcgtgatggagctgcgatatggaagagg 123 |||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||| | Sbjct: 277 ttcaagtacaagctgctgcgtgaacctggacagcgtgatggagctgcattatggaagatg 336 Query: 124 acacagcgatggata 138 || ||| ||||||| Sbjct: 337 actcagaaatggata 351 Score = 77.8 bits (39), Expect = 3e-11 Identities = 144/179 (80%) Strand = Plus / Plus Query: 352 tgtgcttgtgggcaacataatggaggtgatctaccgtacagctcagcaggagtgttggtg 411 ||||||||||| |||||||||||||||||| |||| ||||| ||| |||| | ||| Sbjct: 578 tgtgcttgtggacaacataatggaggtgatttaccctacagttcattaggattattgtca 637 Query: 412 tgccgcaagccagtaatatatgaatgtggtgaagcttgccattgctccctgaattgtcgg 471 |||||||| || | || ||||||||||||||| ||||| | || || ||||| ||| Sbjct: 638 tgccgcaaaccgatgatctatgaatgtggtgaatcttgcaactgttctacaaattgccgg 697 Query: 472 aacagagtaagccaaaagggggtcaggtgtcactttgaggtcttcaggaccacaaatcg 530 |||||||| | |||||| ||| |||| || |||||||||||||||||||| ||||| Sbjct: 698 aacagagtgacccaaaaagggcccaggctacattttgaggtcttcaggaccaccaatcg 756
>gb|AY634575.1| Triticum aestivum cultivar PI-94640 SET domain protein gene, complete cds Length = 2259 Score = 79.8 bits (40), Expect = 8e-12 Identities = 67/76 (88%) Strand = Plus / Plus Query: 4 gatggcctctatagaatccaggagtcttggaaggagagaacaaagtttggcatcaactgc 63 ||||||||||||| ||||| ||||| |||||||||||||||||| ||| ||||| ||| Sbjct: 1216 gatggcctctataagatccatgagtcctggaaggagagaacaaagactgggatcaattgc 1275 Query: 64 ttcaagtacaggctgc 79 |||||||||| ||||| Sbjct: 1276 ttcaagtacaagctgc 1291 Score = 54.0 bits (27), Expect = 5e-04 Identities = 104/130 (80%) Strand = Plus / Plus Query: 149 caacaagaggcacggttatacaacatgacctatcatctggggctgaaactttcccagttt 208 |||| ||||||| ||| |||| | ||| ||||||||||| |||||| | | || || | Sbjct: 1361 caactagaggcagagttctacaccctgatctatcatctggtactgaaaatcttccggtgt 1420 Query: 209 gtgttgtcaatgaggtagagcatganaaaggacctgggcatttcacctatactactcagg 268 || |||||||||| || || ||| |||||||| || | ||||||||||| ||| |||| Sbjct: 1421 gtcttgtcaatgatgttgacagtgagaaaggaccaggccttttcacctatattacccagg 1480 Query: 269 tcaaataccc 278 |||||||||| Sbjct: 1481 tcaaataccc 1490 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 428 tatatgaatgtggtgaagcttgcca 452 ||||||||||||||||| ||||||| Sbjct: 1640 tatatgaatgtggtgaatcttgcca 1664
>ref|NM_191045.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2211 Score = 61.9 bits (31), Expect = 2e-06 Identities = 387/506 (76%) Strand = Plus / Plus Query: 25 gagtcttggaaggagagaacaaagtttggcatcaactgcttcaagtacaggctgcagcgt 84 ||||| ||||| || ||||||||| ||| ||||| || |||||||||| | ||||||| Sbjct: 1219 gagtcctggaaagaaagaacaaagactgggatcaattgtttcaagtacaagttgcagcga 1278 Query: 85 gaacctggacagcgtgatggagctgcgatatggaagaggacacagcgatggatacaaaat 144 || || ||||||| ||||| || ||| || ||||||| | ||| ||||| || ||||| Sbjct: 1279 gagccaggacagcctgatgcagttgcaatctggaagatgtgccagagatgggtagaaaat 1338 Query: 145 gcatcaacaagaggcacggttatacaacatgacctatcatctggggctgaaactttccca 204 || | | ||||||| ||| | || | ||| |||||||| || ||||||| | ||||| Sbjct: 1339 ccagctgctagaggcaaagttttgcaccctgatctatcatcaggtgctgaaaatctccca 1398 Query: 205 gtttgtgttgtcaatgaggtagagcatganaaaggacctgggcatttcacctatactact 264 || ||| || ||||||| || | ||| |||||||| ||||| |||| ||||| |||| Sbjct: 1399 gtgtgtcttatcaatgatgttaacagtgagaaaggaccagggcacttcaactatattact 1458 Query: 265 caggtcaaatacccgagacccctcagctccatgaaagccttgcagggttgcggttgccag 324 |||||||| ||| || || ||| |||| ||||| | || ||||||||| | ||| Sbjct: 1459 caggtcaagtacttgaagccactccgctctatgaagccatttcagggttgcagatgcact 1518 Query: 325 agtgtttgcctacccggcgatgcaaactgtgcttgtgggcaacataatggaggtgatcta 384 |||||||| || || || ||| | | |||| ||||| || |||||||||||||| || Sbjct: 1519 agtgtttgtctgcctggtgataccagttgtgattgtgcacagcataatggaggtgactta 1578 Query: 385 ccgtacagctcagcaggagtgttggtgtgccgcaagccagtaatatatgaatgtggtgaa 444 |||||||| ||| | ||| || | || || ||||||| | ||||||||||||||||| Sbjct: 1579 ccgtacagttcatccggattgcttgtatgtcgcaagcttatggtatatgaatgtggtgaa 1638 Query: 445 gcttgccattgctccctgaattgtcggaacagagtaagccaaaagggggtcaggtgtcac 504 |||||| || || | || ||||| || || ||| ||||||||| || ||| ||| Sbjct: 1639 tcttgccgatgttcaatcaactgtcgtaatagggtagcccaaaagggagtaaggatccac 1698 Query: 505 tttgaggtcttcaggaccacaaatcg 530 |||||||||||||||| |||||||| Sbjct: 1699 cttgaggtcttcaggacaacaaatcg 1724
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 61.9 bits (31), Expect = 2e-06 Identities = 387/506 (76%) Strand = Plus / Plus Query: 25 gagtcttggaaggagagaacaaagtttggcatcaactgcttcaagtacaggctgcagcgt 84 ||||| ||||| || ||||||||| ||| ||||| || |||||||||| | ||||||| Sbjct: 34475767 gagtcctggaaagaaagaacaaagactgggatcaattgtttcaagtacaagttgcagcga 34475826 Query: 85 gaacctggacagcgtgatggagctgcgatatggaagaggacacagcgatggatacaaaat 144 || || ||||||| ||||| || ||| || ||||||| | ||| ||||| || ||||| Sbjct: 34475827 gagccaggacagcctgatgcagttgcaatctggaagatgtgccagagatgggtagaaaat 34475886 Query: 145 gcatcaacaagaggcacggttatacaacatgacctatcatctggggctgaaactttccca 204 || | | ||||||| ||| | || | ||| |||||||| || ||||||| | ||||| Sbjct: 34475887 ccagctgctagaggcaaagttttgcaccctgatctatcatcaggtgctgaaaatctccca 34475946 Query: 205 gtttgtgttgtcaatgaggtagagcatganaaaggacctgggcatttcacctatactact 264 || ||| || ||||||| || | ||| |||||||| ||||| |||| ||||| |||| Sbjct: 34475947 gtgtgtcttatcaatgatgttaacagtgagaaaggaccagggcacttcaactatattact 34476006 Query: 265 caggtcaaatacccgagacccctcagctccatgaaagccttgcagggttgcggttgccag 324 |||||||| ||| || || ||| |||| ||||| | || ||||||||| | ||| Sbjct: 34476007 caggtcaagtacttgaagccactccgctctatgaagccatttcagggttgcagatgcact 34476066 Query: 325 agtgtttgcctacccggcgatgcaaactgtgcttgtgggcaacataatggaggtgatcta 384 |||||||| || || || ||| | | |||| ||||| || |||||||||||||| || Sbjct: 34476067 agtgtttgtctgcctggtgataccagttgtgattgtgcacagcataatggaggtgactta 34476126 Query: 385 ccgtacagctcagcaggagtgttggtgtgccgcaagccagtaatatatgaatgtggtgaa 444 |||||||| ||| | ||| || | || || ||||||| | ||||||||||||||||| Sbjct: 34476127 ccgtacagttcatccggattgcttgtatgtcgcaagcttatggtatatgaatgtggtgaa 34476186 Query: 445 gcttgccattgctccctgaattgtcggaacagagtaagccaaaagggggtcaggtgtcac 504 |||||| || || | || ||||| || || ||| ||||||||| || ||| ||| Sbjct: 34476187 tcttgccgatgttcaatcaactgtcgtaatagggtagcccaaaagggagtaaggatccac 34476246 Query: 505 tttgaggtcttcaggaccacaaatcg 530 |||||||||||||||| |||||||| Sbjct: 34476247 cttgaggtcttcaggacaacaaatcg 34476272
>dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0468B07 Length = 169071 Score = 61.9 bits (31), Expect = 2e-06 Identities = 387/506 (76%) Strand = Plus / Plus Query: 25 gagtcttggaaggagagaacaaagtttggcatcaactgcttcaagtacaggctgcagcgt 84 ||||| ||||| || ||||||||| ||| ||||| || |||||||||| | ||||||| Sbjct: 158111 gagtcctggaaagaaagaacaaagactgggatcaattgtttcaagtacaagttgcagcga 158170 Query: 85 gaacctggacagcgtgatggagctgcgatatggaagaggacacagcgatggatacaaaat 144 || || ||||||| ||||| || ||| || ||||||| | ||| ||||| || ||||| Sbjct: 158171 gagccaggacagcctgatgcagttgcaatctggaagatgtgccagagatgggtagaaaat 158230 Query: 145 gcatcaacaagaggcacggttatacaacatgacctatcatctggggctgaaactttccca 204 || | | ||||||| ||| | || | ||| |||||||| || ||||||| | ||||| Sbjct: 158231 ccagctgctagaggcaaagttttgcaccctgatctatcatcaggtgctgaaaatctccca 158290 Query: 205 gtttgtgttgtcaatgaggtagagcatganaaaggacctgggcatttcacctatactact 264 || ||| || ||||||| || | ||| |||||||| ||||| |||| ||||| |||| Sbjct: 158291 gtgtgtcttatcaatgatgttaacagtgagaaaggaccagggcacttcaactatattact 158350 Query: 265 caggtcaaatacccgagacccctcagctccatgaaagccttgcagggttgcggttgccag 324 |||||||| ||| || || ||| |||| ||||| | || ||||||||| | ||| Sbjct: 158351 caggtcaagtacttgaagccactccgctctatgaagccatttcagggttgcagatgcact 158410 Query: 325 agtgtttgcctacccggcgatgcaaactgtgcttgtgggcaacataatggaggtgatcta 384 |||||||| || || || ||| | | |||| ||||| || |||||||||||||| || Sbjct: 158411 agtgtttgtctgcctggtgataccagttgtgattgtgcacagcataatggaggtgactta 158470 Query: 385 ccgtacagctcagcaggagtgttggtgtgccgcaagccagtaatatatgaatgtggtgaa 444 |||||||| ||| | ||| || | || || ||||||| | ||||||||||||||||| Sbjct: 158471 ccgtacagttcatccggattgcttgtatgtcgcaagcttatggtatatgaatgtggtgaa 158530 Query: 445 gcttgccattgctccctgaattgtcggaacagagtaagccaaaagggggtcaggtgtcac 504 |||||| || || | || ||||| || || ||| ||||||||| || ||| ||| Sbjct: 158531 tcttgccgatgttcaatcaactgtcgtaatagggtagcccaaaagggagtaaggatccac 158590 Query: 505 tttgaggtcttcaggaccacaaatcg 530 |||||||||||||||| |||||||| Sbjct: 158591 cttgaggtcttcaggacaacaaatcg 158616
>dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0425G02 Length = 155432 Score = 61.9 bits (31), Expect = 2e-06 Identities = 387/506 (76%) Strand = Plus / Plus Query: 25 gagtcttggaaggagagaacaaagtttggcatcaactgcttcaagtacaggctgcagcgt 84 ||||| ||||| || ||||||||| ||| ||||| || |||||||||| | ||||||| Sbjct: 51486 gagtcctggaaagaaagaacaaagactgggatcaattgtttcaagtacaagttgcagcga 51545 Query: 85 gaacctggacagcgtgatggagctgcgatatggaagaggacacagcgatggatacaaaat 144 || || ||||||| ||||| || ||| || ||||||| | ||| ||||| || ||||| Sbjct: 51546 gagccaggacagcctgatgcagttgcaatctggaagatgtgccagagatgggtagaaaat 51605 Query: 145 gcatcaacaagaggcacggttatacaacatgacctatcatctggggctgaaactttccca 204 || | | ||||||| ||| | || | ||| |||||||| || ||||||| | ||||| Sbjct: 51606 ccagctgctagaggcaaagttttgcaccctgatctatcatcaggtgctgaaaatctccca 51665 Query: 205 gtttgtgttgtcaatgaggtagagcatganaaaggacctgggcatttcacctatactact 264 || ||| || ||||||| || | ||| |||||||| ||||| |||| ||||| |||| Sbjct: 51666 gtgtgtcttatcaatgatgttaacagtgagaaaggaccagggcacttcaactatattact 51725 Query: 265 caggtcaaatacccgagacccctcagctccatgaaagccttgcagggttgcggttgccag 324 |||||||| ||| || || ||| |||| ||||| | || ||||||||| | ||| Sbjct: 51726 caggtcaagtacttgaagccactccgctctatgaagccatttcagggttgcagatgcact 51785 Query: 325 agtgtttgcctacccggcgatgcaaactgtgcttgtgggcaacataatggaggtgatcta 384 |||||||| || || || ||| | | |||| ||||| || |||||||||||||| || Sbjct: 51786 agtgtttgtctgcctggtgataccagttgtgattgtgcacagcataatggaggtgactta 51845 Query: 385 ccgtacagctcagcaggagtgttggtgtgccgcaagccagtaatatatgaatgtggtgaa 444 |||||||| ||| | ||| || | || || ||||||| | ||||||||||||||||| Sbjct: 51846 ccgtacagttcatccggattgcttgtatgtcgcaagcttatggtatatgaatgtggtgaa 51905 Query: 445 gcttgccattgctccctgaattgtcggaacagagtaagccaaaagggggtcaggtgtcac 504 |||||| || || | || ||||| || || ||| ||||||||| || ||| ||| Sbjct: 51906 tcttgccgatgttcaatcaactgtcgtaatagggtagcccaaaagggagtaaggatccac 51965 Query: 505 tttgaggtcttcaggaccacaaatcg 530 |||||||||||||||| |||||||| Sbjct: 51966 cttgaggtcttcaggacaacaaatcg 51991
>dbj|AK065227.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H03, full insert sequence Length = 2926 Score = 61.9 bits (31), Expect = 2e-06 Identities = 387/506 (76%) Strand = Plus / Plus Query: 25 gagtcttggaaggagagaacaaagtttggcatcaactgcttcaagtacaggctgcagcgt 84 ||||| ||||| || ||||||||| ||| ||||| || |||||||||| | ||||||| Sbjct: 1522 gagtcctggaaagaaagaacaaagactgggatcaattgtttcaagtacaagttgcagcga 1581 Query: 85 gaacctggacagcgtgatggagctgcgatatggaagaggacacagcgatggatacaaaat 144 || || ||||||| ||||| || ||| || ||||||| | ||| ||||| || ||||| Sbjct: 1582 gagccaggacagcctgatgcagttgcaatctggaagatgtgccagagatgggtagaaaat 1641 Query: 145 gcatcaacaagaggcacggttatacaacatgacctatcatctggggctgaaactttccca 204 || | | ||||||| ||| | || | ||| |||||||| || ||||||| | ||||| Sbjct: 1642 ccagctgctagaggcaaagttttgcaccctgatctatcatcaggtgctgaaaatctccca 1701 Query: 205 gtttgtgttgtcaatgaggtagagcatganaaaggacctgggcatttcacctatactact 264 || ||| || ||||||| || | ||| |||||||| ||||| |||| ||||| |||| Sbjct: 1702 gtgtgtcttatcaatgatgttaacagtgagaaaggaccagggcacttcaactatattact 1761 Query: 265 caggtcaaatacccgagacccctcagctccatgaaagccttgcagggttgcggttgccag 324 |||||||| ||| || || ||| |||| ||||| | || ||||||||| | ||| Sbjct: 1762 caggtcaagtacttgaagccactccgctctatgaagccatttcagggttgcagatgcact 1821 Query: 325 agtgtttgcctacccggcgatgcaaactgtgcttgtgggcaacataatggaggtgatcta 384 |||||||| || || || ||| | | |||| ||||| || |||||||||||||| || Sbjct: 1822 agtgtttgtctgcctggtgataccagttgtgattgtgcacagcataatggaggtgactta 1881 Query: 385 ccgtacagctcagcaggagtgttggtgtgccgcaagccagtaatatatgaatgtggtgaa 444 |||||||| ||| | ||| || | || || ||||||| | ||||||||||||||||| Sbjct: 1882 ccgtacagttcatccggattgcttgtatgtcgcaagcttatggtatatgaatgtggtgaa 1941 Query: 445 gcttgccattgctccctgaattgtcggaacagagtaagccaaaagggggtcaggtgtcac 504 |||||| || || | || ||||| || || ||| ||||||||| || ||| ||| Sbjct: 1942 tcttgccgatgttcaatcaactgtcgtaatagggtagcccaaaagggagtaaggatccac 2001 Query: 505 tttgaggtcttcaggaccacaaatcg 530 |||||||||||||||| |||||||| Sbjct: 2002 cttgaggtcttcaggacaacaaatcg 2027
>gb|AC079277.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-65N7, complete sequence Length = 190328 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 374 gaggtgatctaccgtacagctc 395 |||||||||||||||||||||| Sbjct: 145673 gaggtgatctaccgtacagctc 145652
>gb|AF545813.1| Zea mays SET domain protein 113 (sdg113) mRNA, complete cds Length = 2428 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 4 gatggcctctatagaatccaggagtcttggaaggaga 40 |||||||||||||| || || ||||| |||||||||| Sbjct: 1325 gatggcctctataggattcacgagtcatggaaggaga 1361
>gb|AC105164.12| Mus musculus chromosome 6, clone RP24-296I7, complete sequence Length = 178877 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 gttgccagagtgtttgccta 336 |||||||||||||||||||| Sbjct: 175954 gttgccagagtgtttgccta 175973
>gb|AC166251.6| Mus musculus BAC RP23-298H20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 187073 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 gcagcgtgaacctggacagc 97 |||||||||||||||||||| Sbjct: 97291 gcagcgtgaacctggacagc 97272
>gb|AC155732.21| Mus musculus 6 BAC RP24-235I13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 165822 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 gttgccagagtgtttgccta 336 |||||||||||||||||||| Sbjct: 146235 gttgccagagtgtttgccta 146216 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 gcagcgtgaacctggacagc 97 |||||||||||||||||||| Sbjct: 56256 gcagcgtgaacctggacagc 56237
>emb|Z99288.1|CEZK262 Caenorhabditis elegans Cosmid ZK262, complete sequence Length = 39555 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 acaacatgacctatcatctg 187 |||||||||||||||||||| Sbjct: 5879 acaacatgacctatcatctg 5898
>emb|AL354858.16| Human DNA sequence from clone RP11-367P24 on chromosome 6 Contains STSs and GSSs, complete sequence Length = 155358 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 aaggagagaacaaagtttgg 53 |||||||||||||||||||| Sbjct: 109507 aaggagagaacaaagtttgg 109488
>emb|AL157788.16| Human DNA sequence from clone RP11-498J9 on chromosome 10 Contains a pseudogene similar to part of lactate dehydrogenase A (LDH1) (LDHD), two novel genes, the NANOS1 gene for nanos homolog 1 (Drosophila) and one CpG island, complete sequence Length = 119104 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 taatatatgaatgtggtgaa 444 |||||||||||||||||||| Sbjct: 101333 taatatatgaatgtggtgaa 101352
>emb|AL139152.7| Human DNA sequence from clone RP4-704D21 on chromosome 1 Contains the 3' end of a novel gene, a novel gene and the 3' end of an unprocessed pseudogene similar to part of a novel protein, complete sequence Length = 55543 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 agaatccaggagtcttggaa 35 |||||||||||||||||||| Sbjct: 38259 agaatccaggagtcttggaa 38278
>emb|AL138796.6| Human DNA sequence from clone RP4-791M13 on chromosome 1 Contains the 3' end of a novel gene and the 3' end of the PDE4DIP gene for phosphodiesterase 4D interacting protein (myomegalin), complete sequence Length = 120928 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 agaatccaggagtcttggaa 35 |||||||||||||||||||| Sbjct: 73594 agaatccaggagtcttggaa 73613
>gb|AC159000.2| Mus musculus BAC clone RP24-207K16 from chromosome 9, complete sequence Length = 152872 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 cttgccattgctccctgaat 465 |||||||||||||||||||| Sbjct: 79114 cttgccattgctccctgaat 79095
>gb|AC158681.3| Mus musculus 6 BAC RP23-338E5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 202460 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 gttgccagagtgtttgccta 336 |||||||||||||||||||| Sbjct: 14134 gttgccagagtgtttgccta 14115
>gb|AC153773.3| Loxodonta africana clone VMRC15-519D8, complete sequence Length = 86658 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 gtacagctcagcaggagtgt 406 |||||||||||||||||||| Sbjct: 2808 gtacagctcagcaggagtgt 2789
>gb|AC153771.3| Loxodonta africana clone VMRC15-435I22, complete sequence Length = 132352 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 gtacagctcagcaggagtgt 406 |||||||||||||||||||| Sbjct: 124780 gtacagctcagcaggagtgt 124761
>emb|CT486004.9| Mouse DNA sequence from clone RP23-424K3 on chromosome 9, complete sequence Length = 212874 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 cttgccattgctccctgaat 465 |||||||||||||||||||| Sbjct: 46513 cttgccattgctccctgaat 46494
>gb|AC161488.7| Mus musculus chromosome 7, clone RP24-300N16, complete sequence Length = 183220 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 gttgccagagtgtttgccta 336 |||||||||||||||||||| Sbjct: 177947 gttgccagagtgtttgccta 177928
>gb|AC161166.7| Mus musculus chromosome 7, clone RP23-26A14, complete sequence Length = 250028 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 gttgccagagtgtttgccta 336 |||||||||||||||||||| Sbjct: 24628 gttgccagagtgtttgccta 24609
>emb|AL928801.6| Mouse DNA sequence from clone RP23-116P4 on chromosome 2, complete sequence Length = 132674 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 caacataatggaggtgatct 383 |||||||||||||||||||| Sbjct: 99927 caacataatggaggtgatct 99946
>emb|AL807773.7| Mouse DNA sequence from clone RP23-228L24 on chromosome X, complete sequence Length = 186645 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 gaggtcttcaggaccacaaa 527 |||||||||||||||||||| Sbjct: 60206 gaggtcttcaggaccacaaa 60225 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,590,563 Number of Sequences: 3902068 Number of extensions: 4590563 Number of successful extensions: 86643 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 36 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 86480 Number of HSP's gapped (non-prelim): 151 length of query: 530 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 507 effective length of database: 17,143,297,704 effective search space: 8691651935928 effective search space used: 8691651935928 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)