Clone Name	bags32g22
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome	44	0.59
2	gb|AC116494.8| Mus musculus chromosome 7, clone RP24-291G23, com...	44	0.59
3	emb|CT009478.9| M.truncatula DNA sequence from clone MTH2-106O21...	42	2.3
4	emb|AL645784.20| Mouse DNA sequence from clone RP23-11C7 on chro...	42	2.3
5	gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome	42	2.3
6	dbj|AB224198.1| Aspergillus oryzae cDNA, contig sequence: AoEST1040	42	2.3
7	emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromo...	42	2.3
8	emb|AJ421970.1|VVU421970 Vulpes vulpes mRNA for sperm protein 8 ...	42	2.3
9	emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1...	42	2.3
10	dbj|AP003065.2| Homo sapiens genomic DNA, chromosome 11q clone:R...	42	2.3
11	gb|AC166370.3| Mus musculus BAC clone RP23-20I24 from chromosome...	40	9.2
12	gb|AC118000.14| Mus musculus chromosome 3, clone RP23-33M9, comp...	40	9.2
13	gb|AC125122.4| Mus musculus BAC clone RP24-269O4 from chromosome...	40	9.2
14	gb|AC128672.4| Mus musculus BAC clone RP23-136O15 from chromosom...	40	9.2
15	gb|AC125053.4| Mus musculus BAC clone RP23-389L19 from chromosom...	40	9.2
16	emb|CR729860.2|CNS0GQ3U Tetraodon nigroviridis full-length cDNA	40	9.2
17	gb|AF489905.1| Fluoribacter bozemanae ATCC 35545 RNA polymerase ...	40	9.2
18	gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ...	40	9.2
19	emb|AL078459.8|HSA123M24 Human DNA sequence from clone RP4-621F1...	40	9.2
20	emb|AL020994.1|HS929C8 Human DNA sequence from clone CTA-929C8 o...	40	9.2
21	gb|AC154776.2| Mus musculus BAC clone RP23-101N7 from chromosome...	40	9.2
22	gb|AC117602.9| Mus musculus chromosome 5, clone RP23-462C22, com...	40	9.2
23	emb|BX470159.8| Zebrafish DNA sequence from clone DKEY-34H12, co...	40	9.2
24	emb|BX571683.13| Zebrafish DNA sequence from clone CH211-279E7 i...	40	9.2
25	gb|AC144743.4| Oryza sativa (japonica cultivar-group) chromosome...	40	9.2
26	gb|AC163901.2| Mus musculus BAC clone RP23-269N21 from chromosom...	40	9.2
27	gb|AF367756.1| Legionella tucsonensis ATCC 49180 RNA polymerase ...	40	9.2
28	gb|AF367724.1| Fluoribacter bozemanae ATCC 33217 RNA polymerase ...	40	9.2
29	gb|AC104127.2| Homo sapiens chromosome 5 clone RP11-69G16, compl...	40	9.2
30	emb|BX511227.7| Zebrafish DNA sequence from clone DKEY-100E19 in...	40	9.2
31	gb|AC117528.2| Homo sapiens chromosome 5 clone RP11-22C17, compl...	40	9.2
32	gb|AF331478.1|AF331478 Clarias gariepinus clone ZM4 mitochondria...	40	9.2
33	gb|AC159741.2| Mus musculus BAC clone RP23-178B21 from chromosom...	40	9.2
34	gb|AF332859.1|AF332859S1 Mus musculus diadenosine triphosphate h...	40	9.2
35	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	40	9.2
36	gb|AC018809.5| Homo sapiens chromosome 3 clone RP11-1020A11 map ...	40	9.2
37	gb|AF101270.1|AF101270 Legionella bozemanii RNA polymerase B-sub...	40	9.2
38	gb|AC153574.4| Mus musculus 6 BAC RP23-265B8 (Roswell Park Cance...	40	9.2
39	gb|AC174928.2| Mus musculus BAC clone CH25-20L19 from chromosome...	40	9.2
40	gb|AC145743.4| Mus musculus BAC clone RP24-171K11 from 3, comple...	40	9.2
41	emb|CR956648.9| Pig DNA sequence from clone CH242-155F23 on chro...	40	9.2
42	gb|AC022382.4| Homo sapiens chromosome 3 clone RP11-266J6 map 3p...	40	9.2

---

>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 31      gccgaactcttcttcgccgata 52
               ||||||||||||||||||||||
Sbjct: 2084084 gccgaactcttcttcgccgata 2084105

---

>gb|AC116494.8| Mus musculus chromosome 7, clone RP24-291G23, complete sequence
          Length = 201187

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 69    tatccttcaaaaccagtttctgctgc 94
             ||||||||||||||||||| ||||||
Sbjct: 25526 tatccttcaaaaccagtttgtgctgc 25501

---

>emb|CT009478.9| M.truncatula DNA sequence from clone MTH2-106O21 on chromosome 3,
             complete sequence
          Length = 121373

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 70    atccttcaaaaccagtttctg 90
             |||||||||||||||||||||
Sbjct: 42000 atccttcaaaaccagtttctg 41980

---

>emb|AL645784.20| Mouse DNA sequence from clone RP23-11C7 on chromosome 11 Contains a zinc
              finger protein pseudogene, a chaperonin subunit 7 (eta)
              (Cct7) pseudogene, a novel pseudogene and a CpG island,
              complete sequence
          Length = 217352

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 368    tccctcttcccctctccttct 388
              |||||||||||||||||||||
Sbjct: 116979 tccctcttcccctctccttct 116959

---

>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 79      aaccagtttctgctgcagact 99
               |||||||||||||||||||||
Sbjct: 2402350 aaccagtttctgctgcagact 2402330

---

>dbj|AB224198.1| Aspergillus oryzae cDNA, contig sequence: AoEST1040
          Length = 925

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 12 aattcggacgaggcctcgtgccgaa 36
          |||||| ||||||||||||||||||
Sbjct: 27 aattcgcacgaggcctcgtgccgaa 3

---

>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia
          Length = 1923819

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 399    catcaccctccgccgtagcgcgtgg 423
              ||||||||||||||||| |||||||
Sbjct: 438715 catcaccctccgccgtaacgcgtgg 438691

---

>emb|AJ421970.1|VVU421970 Vulpes vulpes mRNA for sperm protein 8 (SP8)
          Length = 879

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 12 aattcggacgaggcctcgtgccgaa 36
          |||||| ||||||||||||||||||
Sbjct: 1  aattcgcacgaggcctcgtgccgaa 25

---

>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 368     tccctcttcccctctccttct 388
               |||||||||||||||||||||
Sbjct: 3848017 tccctcttcccctctccttct 3848037

---

>dbj|AP003065.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-31L22, complete
              sequences
          Length = 190102

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 368    tccctcttcccctctccttct 388
              |||||||||||||||||||||
Sbjct: 128716 tccctcttcccctctccttct 128696

---

>gb|AC166370.3| Mus musculus BAC clone RP23-20I24 from chromosome 9, complete sequence
          Length = 242229

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 66    ttctatccttcaaaaccagt 85
             ||||||||||||||||||||
Sbjct: 68498 ttctatccttcaaaaccagt 68517

---

>gb|AC118000.14| Mus musculus chromosome 3, clone RP23-33M9, complete sequence
          Length = 167218

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 368   tccctcttcccctctccttc 387
             ||||||||||||||||||||
Sbjct: 84557 tccctcttcccctctccttc 84576

---

>gb|AC125122.4| Mus musculus BAC clone RP24-269O4 from chromosome 18, complete sequence
          Length = 173614

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 368   tccctcttcccctctccttc 387
             ||||||||||||||||||||
Sbjct: 69172 tccctcttcccctctccttc 69153

---

>gb|AC128672.4| Mus musculus BAC clone RP23-136O15 from chromosome 18, complete sequence
          Length = 215137

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 290    aggaagtactgtgaagaaca 309
              ||||||||||||||||||||
Sbjct: 191693 aggaagtactgtgaagaaca 191712

---

>gb|AC125053.4| Mus musculus BAC clone RP23-389L19 from chromosome 18, complete sequence
          Length = 189741

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 290    aggaagtactgtgaagaaca 309
              ||||||||||||||||||||
Sbjct: 158376 aggaagtactgtgaagaaca 158357

---

>emb|CR729860.2|CNS0GQ3U Tetraodon nigroviridis full-length cDNA
          Length = 1008

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 180 ttgagtgtgattgtgatatt 199
           ||||||||||||||||||||
Sbjct: 432 ttgagtgtgattgtgatatt 451

---

>gb|AF489905.1| Fluoribacter bozemanae ATCC 35545 RNA polymerase B subunit (rpoB)
           gene, partial cds
          Length = 300

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 76  caaaaccagtttctgctgca 95
           ||||||||||||||||||||
Sbjct: 122 caaaaccagtttctgctgca 141

---

>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 530    cgtgggactcgccggcgtcg 549
              ||||||||||||||||||||
Sbjct: 694063 cgtgggactcgccggcgtcg 694082

---

>emb|AL078459.8|HSA123M24 Human DNA sequence from clone RP4-621F18 on chromosome 1p11.4-21.3
             Contains part of a novel gene, and the 3' end of the DDAH1
             gene for dimethylarginine dimethylaminohydrolase 1,
             complete sequence
          Length = 83946

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 324   agtattaattccaacggctg 343
             ||||||||||||||||||||
Sbjct: 55206 agtattaattccaacggctg 55225

---

>emb|AL020994.1|HS929C8 Human DNA sequence from clone CTA-929C8 on chromosome 22q12.1-12.3,
             complete sequence
          Length = 139190

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 368   tccctcttcccctctccttc 387
             ||||||||||||||||||||
Sbjct: 46165 tccctcttcccctctccttc 46146

---

>gb|AC154776.2| Mus musculus BAC clone RP23-101N7 from chromosome 14, complete sequence
          Length = 215871

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    gccattttctatccttcaaa 79
             ||||||||||||||||||||
Sbjct: 11054 gccattttctatccttcaaa 11073

---

>gb|AC117602.9| Mus musculus chromosome 5, clone RP23-462C22, complete sequence
          Length = 205604

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 369    ccctcttcccctctccttct 388
              ||||||||||||||||||||
Sbjct: 142372 ccctcttcccctctccttct 142353

---

>emb|BX470159.8| Zebrafish DNA sequence from clone DKEY-34H12, complete sequence
          Length = 210284

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 236    gagccagatttcgtcttgga 255
              ||||||||||||||||||||
Sbjct: 153600 gagccagatttcgtcttgga 153619

---

>emb|BX571683.13| Zebrafish DNA sequence from clone CH211-279E7 in linkage group 20
             Contains two CpG islands, complete sequence
          Length = 45633

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 607   tacttaatgtatccttttct 626
             ||||||||||||||||||||
Sbjct: 31200 tacttaatgtatccttttct 31219

---

>gb|AC144743.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0009H09,
              complete sequence
          Length = 148740

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     cattttctatccttcaaaac 81
              ||||||||||||||||||||
Sbjct: 103422 cattttctatccttcaaaac 103403

---

>gb|AC163901.2| Mus musculus BAC clone RP23-269N21 from chromosome 17, complete
             sequence
          Length = 202092

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 367   gtccctcttcccctctcctt 386
             ||||||||||||||||||||
Sbjct: 38630 gtccctcttcccctctcctt 38611

---

>gb|AF367756.1| Legionella tucsonensis ATCC 49180 RNA polymerase B subunit (rpoB)
           gene, partial cds
          Length = 300

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 76  caaaaccagtttctgctgca 95
           ||||||||||||||||||||
Sbjct: 122 caaaaccagtttctgctgca 141

---

>gb|AF367724.1| Fluoribacter bozemanae ATCC 33217 RNA polymerase B subunit (rpoB)
           gene, partial cds
          Length = 300

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 76  caaaaccagtttctgctgca 95
           ||||||||||||||||||||
Sbjct: 122 caaaaccagtttctgctgca 141

---

>gb|AC104127.2| Homo sapiens chromosome 5 clone RP11-69G16, complete sequence
          Length = 161764

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    accagtttctgctgcagact 99
             ||||||||||||||||||||
Sbjct: 95502 accagtttctgctgcagact 95521

---

>emb|BX511227.7| Zebrafish DNA sequence from clone DKEY-100E19 in linkage group 14,
              complete sequence
          Length = 262038

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 236    gagccagatttcgtcttgga 255
              ||||||||||||||||||||
Sbjct: 168800 gagccagatttcgtcttgga 168781

---

>gb|AC117528.2| Homo sapiens chromosome 5 clone RP11-22C17, complete sequence
          Length = 144236

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 80     accagtttctgctgcagact 99
              ||||||||||||||||||||
Sbjct: 121385 accagtttctgctgcagact 121366

---

>gb|AF331478.1|AF331478 Clarias gariepinus clone ZM4 mitochondrial D-loop, partial sequence
          Length = 841

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 62  cattttctatccttcaaaac 81
           ||||||||||||||||||||
Sbjct: 96  cattttctatccttcaaaac 115

---

>gb|AC159741.2| Mus musculus BAC clone RP23-178B21 from chromosome 9, complete sequence
          Length = 185878

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 66     ttctatccttcaaaaccagt 85
              ||||||||||||||||||||
Sbjct: 157268 ttctatccttcaaaaccagt 157287

---

>gb|AF332859.1|AF332859S1 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, exon 5 and
              partial cds
          Length = 270491

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     gccattttctatccttcaaa 79
              ||||||||||||||||||||
Sbjct: 206078 gccattttctatccttcaaa 206059

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 62       cattttctatccttcaaaac 81
                ||||||||||||||||||||
Sbjct: 23279365 cattttctatccttcaaaac 23279346

---

>gb|AC018809.5| Homo sapiens chromosome 3 clone RP11-1020A11 map 3p, complete sequence
          Length = 216911

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 72     ccttcaaaaccagtttctgctgca 95
              |||||||||||||||||| |||||
Sbjct: 182087 ccttcaaaaccagtttcttctgca 182064

---

>gb|AF101270.1|AF101270 Legionella bozemanii RNA polymerase B-subunit (rpoB) gene, partial
           cds
          Length = 311

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 76  caaaaccagtttctgctgca 95
           ||||||||||||||||||||
Sbjct: 108 caaaaccagtttctgctgca 127

---

>gb|AC153574.4| Mus musculus 6 BAC RP23-265B8 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 176152

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 368    tccctcttcccctctccttc 387
              ||||||||||||||||||||
Sbjct: 123438 tccctcttcccctctccttc 123457

---

>gb|AC174928.2| Mus musculus BAC clone CH25-20L19 from chromosome 6, complete sequence
          Length = 94653

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 368   tccctcttcccctctccttc 387
             ||||||||||||||||||||
Sbjct: 66122 tccctcttcccctctccttc 66103

---

>gb|AC145743.4| Mus musculus BAC clone RP24-171K11 from 3, complete sequence
          Length = 174136

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  tccctcttcccctctccttc 387
            ||||||||||||||||||||
Sbjct: 4496 tccctcttcccctctccttc 4477

---

>emb|CR956648.9| Pig DNA sequence from clone CH242-155F23 on chromosome 17, complete
              sequence
          Length = 168798

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 76     caaaaccagtttctgctgca 95
              ||||||||||||||||||||
Sbjct: 106311 caaaaccagtttctgctgca 106330

---

>gb|AC022382.4| Homo sapiens chromosome 3 clone RP11-266J6 map 3p, complete sequence
          Length = 185067

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 72    ccttcaaaaccagtttctgctgca 95
             |||||||||||||||||| |||||
Sbjct: 38528 ccttcaaaaccagtttcttctgca 38505


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,408,478
Number of Sequences: 3902068
Number of extensions: 4408478
Number of successful extensions: 93442
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93222
Number of HSP's gapped (non-prelim): 220
length of query: 675
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 652
effective length of database: 17,143,297,704
effective search space: 11177430103008
effective search space used: 11177430103008
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---