| Clone Name | bags32f04 |
|---|---|
| Clone Library Name | barley_pub |
>V040_FOWPV (Q9J5G3) Putative serpin-like protein FPV040| Length = 337 Score = 33.1 bits (74), Expect = 0.70 Identities = 27/82 (32%), Positives = 36/82 (43%) Frame = -2 Query: 385 LGLDRICKRAPAHDVRYDVIEG*YNDCIFSFGYRDVYVLINIQKTVLNTEVEKATIPIWR 206 L + +I + D+ Y G N CI R +L N KT E E +I Sbjct: 65 LYMKKINDNMNSSDIDYFCKLGLNNVCI---NQRTKNILYNCYKTCTVDETEGCSIKFKN 121 Query: 205 WLNFENLAHFPFVAPSLERIMK 140 L FE L + PF AP+ E+I K Sbjct: 122 VLEFEALWNRPFTAPTEEQIRK 143
>ELM1_YEAST (P32801) Serine/threonine-protein kinase ELM1 (EC 2.7.11.1)| Length = 640 Score = 31.6 bits (70), Expect = 2.0 Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%) Frame = +2 Query: 74 FSLSVWEMGTLLTLGLTDSCEFFHD-PFKGRSDEGKVRKVLKVEPTPDGNGRFFNLSVQN 250 F L +W +LG+T C +++ PF G ++ K+++V + NG N V Sbjct: 333 FKLDIW------SLGVTLYCLLYNELPFFGENEFETYHKIIEVSLSSKINGNTLNDLVIK 386 Query: 251 RLLNVDENIYIPI 289 RLL D + I I Sbjct: 387 RLLEKDVTLRISI 399
>BPH1_YEAST (P25356) Beige protein homolog 1| Length = 2167 Score = 30.8 bits (68), Expect = 3.5 Identities = 13/36 (36%), Positives = 23/36 (63%) Frame = +2 Query: 230 FNLSVQNRLLNVDENIYIPITKGEYAVIVSTFNYII 337 FN NR++ ++ +IY+ I +G++ +S NYII Sbjct: 248 FNSVTSNRIMTIERHIYLEIKEGQFC--ISNDNYII 281
>DNAE2_BRAJA (Q89QU8) Error-prone DNA polymerase (EC 2.7.7.7)| Length = 1151 Score = 30.8 bits (68), Expect = 3.5 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%) Frame = +1 Query: 277 IHPYNQRRICSHCINLQLHHTAHHGLEHVYK-FYQARGVAAIQ*AAVLARIGVAKVKNDD 453 +HPY +RR +N H + +YK ++ +GV Q A+ I AK +++ Sbjct: 627 VHPYLRRRNGQEKVNYPSPSPEHGPADELYKVLHKTKGVPLFQEQAMRIAIEAAKFTSEE 686 Query: 454 --GSRREMA 474 G RR MA Sbjct: 687 ANGLRRSMA 695
>NUDH_RHOPA (P61786) Probable (di)nucleoside polyphosphate hydrolase (EC| 3.6.1.-) Length = 168 Score = 29.6 bits (65), Expect = 7.7 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Frame = -2 Query: 229 KATIPIWRWLNFENLAHF--PFVAPSLERIMKELARI 125 KA WRW NL PF P ER++KE +++ Sbjct: 128 KAEFTSWRWEPMHNLPELIVPFKRPVYERVVKEFSQL 164
>HEM6_DROME (Q9V3D2) Coproporphyrinogen III oxidase (EC 1.3.3.3)| (Coproporphyrinogenase) (Coprogen oxidase) (COX) Length = 390 Score = 29.6 bits (65), Expect = 7.7 Identities = 15/31 (48%), Positives = 22/31 (70%) Frame = +2 Query: 104 LLTLGLTDSCEFFHDPFKGRSDEGKVRKVLK 196 L++L L E+ H+P K +S+EGK+ KVLK Sbjct: 355 LMSLPLHARWEYMHEP-KSQSEEGKLMKVLK 384 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,878,917 Number of Sequences: 219361 Number of extensions: 2048632 Number of successful extensions: 6309 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 6103 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6309 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5824436538 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)