ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags32f04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 123 7e-25
2dbj|AP003767.3| Oryza sativa (japonica cultivar-group) genomic D... 123 7e-25
3dbj|AP003487.2| Oryza sativa (japonica cultivar-group) genomic D... 123 7e-25
4emb|CR376849.29| Zebrafish DNA sequence from clone CH211-145A9 i... 46 0.14
5emb|AL031776.7|HS312L17 Human DNA sequence from clone RP1-312L17... 44 0.55
6ref|NM_101308.2| Arabidopsis thaliana unknown protein AT1G14410 ... 42 2.2
7ref|NM_184307.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.2
8gb|AC087775.2| Rattus norvegicus strain Brown Norway clone RP31-... 42 2.2
9gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 42 2.2
10gb|AC119088.4| Rattus norvegicus 4 BAC CH230-222H3 (Children's H... 42 2.2
11gb|AF332452.1| Arabidopsis thaliana putative DNA-binding protein... 42 2.2
12gb|AY059097.1| Arabidopsis thaliana putative DNA-binding protein... 42 2.2
13gb|AF370156.1| Arabidopsis thaliana putative DNA-binding protein... 42 2.2
14gb|AC013564.7| Homo sapiens chromosome 15, clone RP11-321F6, com... 42 2.2
15gb|AC090016.11| Homo sapiens 12q BAC RP11-730K16 (Roswell Park C... 42 2.2
16gb|AC027654.3| Mus musculus strain C57BL6/J chromosome 6 clone R... 42 2.2
17gb|AF162137.2|AF162137 Mus musculus WNT-2 gene, partial cds; put... 42 2.2
18dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
19gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold 42 2.2
20dbj|AP002483.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
21gb|AC158663.2| Mus musculus BAC RP23-16J8 (Roswell Park Cancer ... 42 2.2
22emb|AL626762.10| Mouse DNA sequence from clone RP23-68F3 on chro... 42 2.2
23gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete... 40 8.6
24ref|XM_593344.2| PREDICTED: Bos taurus similar to N-acetylgalact... 40 8.6
25gb|AC140387.2| Mus musculus BAC clone RP24-185D21 from chromosom... 40 8.6
26ref|XM_537985.2| PREDICTED: Canis familiaris similar to DNA poly... 40 8.6
27emb|CR626875.10| Zebrafish DNA sequence from clone DKEY-31J4 in ... 40 8.6
28gb|AC136903.6| Mus musculus chromosome 9, clone RP23-475J16, com... 40 8.6
29emb|AL390061.9| Human DNA sequence from clone RP11-322I2 on chro... 40 8.6
30ref|XM_775596.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.6
31emb|AL049646.19|HSDJ568F9 Human DNA sequence from clone RP4-568F... 40 8.6
32dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
33dbj|BS000238.1| Pan troglodytes chromosome 22 clone:PTB-016O01, ... 40 8.6
34gb|AC108439.22| Mus musculus chromosome 8, clone RP23-214F1, com... 40 8.6
35emb|AL954242.1|PTB109N16 Pan troglodytes chromosome 22 BAC PTB-1... 40 8.6
36dbj|AP001752.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 8.6
37gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.6
38emb|AL731875.2|CNS08C8F Oryza sativa chromosome 12, . BAC OJ1060... 40 8.6
39dbj|AP001052.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 8.6 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  123 bits (62), Expect = 7e-25
 Identities = 89/98 (90%)
 Strand = Plus / Plus

                                                                           
Query: 68      caggtgttctcattatctgtgtgggagatgggaaccttgcttactcttggtctaacagat 127
               |||||||||||||||||||||||||||||||| | |||||||||||| |||| ||| |||
Sbjct: 2405425 caggtgttctcattatctgtgtgggagatgggtagcttgcttactctaggtccaactgat 2405484

                                                     
Query: 128     tcgtgcgagttctttcatgatcctttcaagggaaggag 165
               || ||||||||||| ||||| ||||||||||| |||||
Sbjct: 2405485 tcttgcgagttcttccatgaccctttcaaggggaggag 2405522



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 77/89 (86%)
 Strand = Plus / Plus

                                                                           
Query: 240     gtgttcaaaaccgtcttttgaatgttgatgagaacatatacatccctataaccaaaggag 299
               ||||||||||||||||  ||||  | |||||||| || ||||||||||||||||||||||
Sbjct: 2406307 gtgttcaaaaccgtctcctgaacatcgatgagaatatttacatccctataaccaaaggag 2406366

                                            
Query: 300     aatatgcagtcattgtatcaaccttcaat 328
               ||| ||| || |||||||| || ||||||
Sbjct: 2406367 aatttgctgtgattgtatcgactttcaat 2406395



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                           
Query: 170     gaagggaaagtgcgcaaggttctcaaagttgagccaacgccagatgggaatggtcgcttt 229
               ||||| |||||||| |||||||| |||||||||||||| |||||||| ||  ||||||||
Sbjct: 2406150 gaaggtaaagtgcggaaggttctaaaagttgagccaacaccagatggcaacagtcgcttt 2406209

                           
Query: 230     ttcaacctcagt 241
               ||||| ||||||
Sbjct: 2406210 ttcaatctcagt 2406221



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                            
Query: 347     atgggctggagcacgtttacaaattctat 375
               |||||||||||||| ||||||||||||||
Sbjct: 2406763 atgggctggagcacatttacaaattctat 2406791



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 61/72 (84%), Gaps = 1/72 (1%)
 Strand = Plus / Plus

                                                                           
Query: 2       ggaggggttcgtgctgctcc-gttcgcccccgcggtggggccccggcagtatgattgggc 60
               |||||| ||||||||||| | |||||| ||||| |||| | | || |||||||||||| |
Sbjct: 2404940 ggagggattcgtgctgctacagttcgcgcccgctgtggcgactcgtcagtatgattggac 2404999

                           
Query: 61      acgcaagcaggt 72
                |||||||||||
Sbjct: 2405000 tcgcaagcaggt 2405011
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>dbj|AP003767.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0036F10
          Length = 149415

 Score =  123 bits (62), Expect = 7e-25
 Identities = 89/98 (90%)
 Strand = Plus / Plus

                                                                         
Query: 68    caggtgttctcattatctgtgtgggagatgggaaccttgcttactcttggtctaacagat 127
             |||||||||||||||||||||||||||||||| | |||||||||||| |||| ||| |||
Sbjct: 36883 caggtgttctcattatctgtgtgggagatgggtagcttgcttactctaggtccaactgat 36942

                                                   
Query: 128   tcgtgcgagttctttcatgatcctttcaagggaaggag 165
             || ||||||||||| ||||| ||||||||||| |||||
Sbjct: 36943 tcttgcgagttcttccatgaccctttcaaggggaggag 36980



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 77/89 (86%)
 Strand = Plus / Plus

                                                                         
Query: 240   gtgttcaaaaccgtcttttgaatgttgatgagaacatatacatccctataaccaaaggag 299
             ||||||||||||||||  ||||  | |||||||| || ||||||||||||||||||||||
Sbjct: 37765 gtgttcaaaaccgtctcctgaacatcgatgagaatatttacatccctataaccaaaggag 37824

                                          
Query: 300   aatatgcagtcattgtatcaaccttcaat 328
             ||| ||| || |||||||| || ||||||
Sbjct: 37825 aatttgctgtgattgtatcgactttcaat 37853



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                         
Query: 170   gaagggaaagtgcgcaaggttctcaaagttgagccaacgccagatgggaatggtcgcttt 229
             ||||| |||||||| |||||||| |||||||||||||| |||||||| ||  ||||||||
Sbjct: 37608 gaaggtaaagtgcggaaggttctaaaagttgagccaacaccagatggcaacagtcgcttt 37667

                         
Query: 230   ttcaacctcagt 241
             ||||| ||||||
Sbjct: 37668 ttcaatctcagt 37679



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 347   atgggctggagcacgtttacaaattctat 375
             |||||||||||||| ||||||||||||||
Sbjct: 38221 atgggctggagcacatttacaaattctat 38249



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 61/72 (84%), Gaps = 1/72 (1%)
 Strand = Plus / Plus

                                                                         
Query: 2     ggaggggttcgtgctgctcc-gttcgcccccgcggtggggccccggcagtatgattgggc 60
             |||||| ||||||||||| | |||||| ||||| |||| | | || |||||||||||| |
Sbjct: 36398 ggagggattcgtgctgctacagttcgcgcccgctgtggcgactcgtcagtatgattggac 36457

                         
Query: 61    acgcaagcaggt 72
              |||||||||||
Sbjct: 36458 tcgcaagcaggt 36469
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>dbj|AP003487.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0007O20
          Length = 147363

 Score =  123 bits (62), Expect = 7e-25
 Identities = 89/98 (90%)
 Strand = Plus / Plus

                                                                          
Query: 68     caggtgttctcattatctgtgtgggagatgggaaccttgcttactcttggtctaacagat 127
              |||||||||||||||||||||||||||||||| | |||||||||||| |||| ||| |||
Sbjct: 127226 caggtgttctcattatctgtgtgggagatgggtagcttgcttactctaggtccaactgat 127285

                                                    
Query: 128    tcgtgcgagttctttcatgatcctttcaagggaaggag 165
              || ||||||||||| ||||| ||||||||||| |||||
Sbjct: 127286 tcttgcgagttcttccatgaccctttcaaggggaggag 127323



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 77/89 (86%)
 Strand = Plus / Plus

                                                                          
Query: 240    gtgttcaaaaccgtcttttgaatgttgatgagaacatatacatccctataaccaaaggag 299
              ||||||||||||||||  ||||  | |||||||| || ||||||||||||||||||||||
Sbjct: 128108 gtgttcaaaaccgtctcctgaacatcgatgagaatatttacatccctataaccaaaggag 128167

                                           
Query: 300    aatatgcagtcattgtatcaaccttcaat 328
              ||| ||| || |||||||| || ||||||
Sbjct: 128168 aatttgctgtgattgtatcgactttcaat 128196



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                          
Query: 170    gaagggaaagtgcgcaaggttctcaaagttgagccaacgccagatgggaatggtcgcttt 229
              ||||| |||||||| |||||||| |||||||||||||| |||||||| ||  ||||||||
Sbjct: 127951 gaaggtaaagtgcggaaggttctaaaagttgagccaacaccagatggcaacagtcgcttt 128010

                          
Query: 230    ttcaacctcagt 241
              ||||| ||||||
Sbjct: 128011 ttcaatctcagt 128022



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                           
Query: 347    atgggctggagcacgtttacaaattctat 375
              |||||||||||||| ||||||||||||||
Sbjct: 128564 atgggctggagcacatttacaaattctat 128592



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 61/72 (84%), Gaps = 1/72 (1%)
 Strand = Plus / Plus

                                                                          
Query: 2      ggaggggttcgtgctgctcc-gttcgcccccgcggtggggccccggcagtatgattgggc 60
              |||||| ||||||||||| | |||||| ||||| |||| | | || |||||||||||| |
Sbjct: 126741 ggagggattcgtgctgctacagttcgcgcccgctgtggcgactcgtcagtatgattggac 126800

                          
Query: 61     acgcaagcaggt 72
               |||||||||||
Sbjct: 126801 tcgcaagcaggt 126812
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>emb|CR376849.29| Zebrafish DNA sequence from clone CH211-145A9 in linkage group 11,
             complete sequence
          Length = 147098

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 526   tgctgtttggaaaatattttggt 548
             |||||||||||||||||||||||
Sbjct: 96341 tgctgtttggaaaatattttggt 96319
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>emb|AL031776.7|HS312L17 Human DNA sequence from clone RP1-312L17 on chromosome 6q22.2-23.1
             Contains the 5' end of the FLJ14440 gene for
             thrombospondin and a CpG island, complete sequence
          Length = 108208

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 32/34 (94%), Gaps = 1/34 (2%)
 Strand = Plus / Plus

                                               
Query: 567   tctctggtttagttaggaaatgatatattgggtt 600
             |||||| |||||||||||| ||||||||||||||
Sbjct: 22268 tctctgatttagttaggaa-tgatatattgggtt 22300
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>ref|NM_101308.2| Arabidopsis thaliana unknown protein AT1G14410 mRNA, complete cds
          Length = 1104

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 230 ttcaacctcagtgttcaaaaccgtcttttgaatgttgatgagaacatatacat 282
           |||||||| ||||||||||||   ||| ||||||| ||||||| ||| |||||
Sbjct: 657 ttcaacctaagtgttcaaaacaagcttgtgaatgtggatgagagcatttacat 709
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>ref|NM_184307.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 378

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 434 cgaaggtgaagaatgacgacg 454
           |||||||||||||||||||||
Sbjct: 302 cgaaggtgaagaatgacgacg 322
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>gb|AC087775.2| Rattus norvegicus strain Brown Norway clone RP31-464J4, complete sequence
          Length = 185081

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 523    aagtgctgtttggaaaatattttgg 547
              |||| ||||||||||||||||||||
Sbjct: 139589 aagtactgtttggaaaatattttgg 139565
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>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 175     gaaagtgcgcaaggttctcaa 195
               |||||||||||||||||||||
Sbjct: 2661527 gaaagtgcgcaaggttctcaa 2661507
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>gb|AC119088.4| Rattus norvegicus 4 BAC CH230-222H3 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 224687

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 523   aagtgctgtttggaaaatattttgg 547
             |||| ||||||||||||||||||||
Sbjct: 60676 aagtactgtttggaaaatattttgg 60700
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>gb|AF332452.1| Arabidopsis thaliana putative DNA-binding protein p24 (At1g14410)
           mRNA, complete cds
          Length = 792

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 230 ttcaacctcagtgttcaaaaccgtcttttgaatgttgatgagaacatatacat 282
           |||||||| ||||||||||||   ||| ||||||| ||||||| ||| |||||
Sbjct: 574 ttcaacctaagtgttcaaaacaagcttgtgaatgtggatgagagcatttacat 626
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>gb|AY059097.1| Arabidopsis thaliana putative DNA-binding protein p24 (At1g14410)
           mRNA, complete cds
          Length = 823

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 230 ttcaacctcagtgttcaaaaccgtcttttgaatgttgatgagaacatatacat 282
           |||||||| ||||||||||||   ||| ||||||| ||||||| ||| |||||
Sbjct: 574 ttcaacctaagtgttcaaaacaagcttgtgaatgtggatgagagcatttacat 626
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>gb|AF370156.1| Arabidopsis thaliana putative DNA-binding protein p24 (At1g14410)
           mRNA, complete cds
          Length = 1113

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 230 ttcaacctcagtgttcaaaaccgtcttttgaatgttgatgagaacatatacat 282
           |||||||| ||||||||||||   ||| ||||||| ||||||| ||| |||||
Sbjct: 657 ttcaacctaagtgttcaaaacaagcttgtgaatgtggatgagagcatttacat 709
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>gb|AC013564.7| Homo sapiens chromosome 15, clone RP11-321F6, complete sequence
          Length = 210133

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 487    ttttggtggagttccttccag 507
              |||||||||||||||||||||
Sbjct: 118041 ttttggtggagttccttccag 118021
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>gb|AC090016.11| Homo sapiens 12q BAC RP11-730K16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 121817

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 487   ttttggtggagttccttccag 507
             |||||||||||||||||||||
Sbjct: 56784 ttttggtggagttccttccag 56804
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>gb|AC027654.3| Mus musculus strain C57BL6/J chromosome 6 clone RP23-219K14, complete
             sequence
          Length = 223678

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 523   aagtgctgtttggaaaatattttgg 547
             |||| ||||||||||||||||||||
Sbjct: 13414 aagtactgtttggaaaatattttgg 13390
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>gb|AF162137.2|AF162137 Mus musculus WNT-2 gene, partial cds; putative ankyrin-related protein
              and cystic fibrosis transmembrane conductance regulator
              (CFTR) genes, complete cds; and unknown gene
          Length = 357856

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 523    aagtgctgtttggaaaatattttgg 547
              |||| ||||||||||||||||||||
Sbjct: 324697 aagtactgtttggaaaatattttgg 324673
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 434     cgaaggtgaagaatgacgacg 454
               |||||||||||||||||||||
Sbjct: 2223984 cgaaggtgaagaatgacgacg 2224004
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>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold
          Length = 1888123

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 523     aagtgctgtttggaaaatattttgg 547
               |||| ||||||||||||||||||||
Sbjct: 1472761 aagtactgtttggaaaatattttgg 1472737
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>dbj|AP002483.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
            clone:P0019D06
          Length = 167405

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 434  cgaaggtgaagaatgacgacg 454
            |||||||||||||||||||||
Sbjct: 7568 cgaaggtgaagaatgacgacg 7588
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>gb|AC158663.2| Mus musculus  BAC RP23-16J8 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 216101

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 523    aagtgctgtttggaaaatattttgg 547
              |||| ||||||||||||||||||||
Sbjct: 129512 aagtactgtttggaaaatattttgg 129488
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>emb|AL626762.10| Mouse DNA sequence from clone RP23-68F3 on chromosome 4, complete
             sequence
          Length = 228767

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 519   ttggaagtgctgtttggaaaa 539
             |||||||||||||||||||||
Sbjct: 92941 ttggaagtgctgtttggaaaa 92961
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>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome
          Length = 2201561

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 476    ggaggatgaacttttggtggagtt 499
              |||||||||| |||||||||||||
Sbjct: 510886 ggaggatgaaattttggtggagtt 510863
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>ref|XM_593344.2| PREDICTED: Bos taurus similar to N-acetylgalactosaminyltransferase A
            blood group-like enzyme, transcript variant 1
            (LOC515340), mRNA
          Length = 2118

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 492  gtggagttccttccagaagaggaa 515
            |||||||||| |||||||||||||
Sbjct: 1439 gtggagttccctccagaagaggaa 1416
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>gb|AC140387.2| Mus musculus BAC clone RP24-185D21 from chromosome 9, complete sequence
          Length = 158741

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 594   ttgggttctggcctattcct 613
             ||||||||||||||||||||
Sbjct: 18829 ttgggttctggcctattcct 18810
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>ref|XM_537985.2| PREDICTED: Canis familiaris similar to DNA polymerase alpha catalytic
            subunit (LOC480869), mRNA
          Length = 4773

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 197  gttgagccaacgccagatgggaat 220
            |||||||||||| |||||||||||
Sbjct: 3196 gttgagccaacgtcagatgggaat 3219
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>emb|CR626875.10| Zebrafish DNA sequence from clone DKEY-31J4 in linkage group 15, complete
              sequence
          Length = 212742

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 540    tattttggtgcataatttgg 559
              ||||||||||||||||||||
Sbjct: 194988 tattttggtgcataatttgg 194969
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>gb|AC136903.6| Mus musculus chromosome 9, clone RP23-475J16, complete sequence
          Length = 180530

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 594    ttgggttctggcctattcct 613
              ||||||||||||||||||||
Sbjct: 144606 ttgggttctggcctattcct 144587
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>emb|AL390061.9| Human DNA sequence from clone RP11-322I2 on chromosome 10 Contains a
              novel gene and a pseudogene similar to MAP
              kinase-interacting serine/threonine kinase 1 (MKNK1),
              complete sequence
          Length = 174818

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 531    tttggaaaatattttggtgc 550
              ||||||||||||||||||||
Sbjct: 136309 tttggaaaatattttggtgc 136328
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>ref|XM_775596.1| PREDICTED: Strongylocentrotus purpuratus similar to tudor domain
           containing 1 (LOC575181), mRNA
          Length = 7881

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 516 ttcttggaagtgctgtttgg 535
           ||||||||||||||||||||
Sbjct: 812 ttcttggaagtgctgtttgg 793
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>emb|AL049646.19|HSDJ568F9 Human DNA sequence from clone RP4-568F9 on chromosome 20 Contains the
              ZNF133 gene for zinc finger protein 133, three novel genes,
              the 3' end of the C20orf12 gene for chromosome 20 open
              reading frame 12 and two CpG islands, complete sequence
          Length = 155432

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 227    tttttcaacctcagtgttca 246
              ||||||||||||||||||||
Sbjct: 105413 tttttcaacctcagtgttca 105394
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 504      ccagaagaggaattcttgga 523
                ||||||||||||||||||||
Sbjct: 11211281 ccagaagaggaattcttgga 11211300
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>dbj|BS000238.1| Pan troglodytes chromosome 22 clone:PTB-016O01, map 22, complete
              sequences
          Length = 168017

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 211    agatgggaatggtcgctttttcaa 234
              |||||||||||||| |||||||||
Sbjct: 131954 agatgggaatggtccctttttcaa 131977
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>gb|AC108439.22| Mus musculus chromosome 8, clone RP23-214F1, complete sequence
          Length = 205732

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 533    tggaaaatattttggtgcataatt 556
              ||||||||| ||||||||||||||
Sbjct: 104780 tggaaaataatttggtgcataatt 104803
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>emb|AL954242.1|PTB109N16 Pan troglodytes chromosome 22 BAC PTB-109N16, complete sequence
          Length = 190477

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 211   agatgggaatggtcgctttttcaa 234
             |||||||||||||| |||||||||
Sbjct: 36780 agatgggaatggtccctttttcaa 36803
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>dbj|AP001752.1| Homo sapiens genomic DNA, chromosome 21q, section 96/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 211   agatgggaatggtcgctttttcaa 234
             |||||||||||||| |||||||||
Sbjct: 69810 agatgggaatggtccctttttcaa 69833
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 504      ccagaagaggaattcttgga 523
                ||||||||||||||||||||
Sbjct: 11210952 ccagaagaggaattcttgga 11210971
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>emb|AL731875.2|CNS08C8F Oryza sativa chromosome 12, . BAC OJ1060_G11 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 108805

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 504   ccagaagaggaattcttgga 523
             ||||||||||||||||||||
Sbjct: 45377 ccagaagaggaattcttgga 45358
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>dbj|AP001052.1| Homo sapiens genomic DNA, chromosome 21, clone:KB22A5, MX1-D21S171
             region, complete sequence
          Length = 145540

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 211   agatgggaatggtcgctttttcaa 234
             |||||||||||||| |||||||||
Sbjct: 47989 agatgggaatggtccctttttcaa 48012


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,565,872
Number of Sequences: 3902068
Number of extensions: 5565872
Number of successful extensions: 106039
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 105822
Number of HSP's gapped (non-prelim): 214
length of query: 629
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 606
effective length of database: 17,143,297,704
effective search space: 10388838408624
effective search space used: 10388838408624
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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