>Y5161_ARATH (Q9M015) Protein At5g01610|
          Length = 170

 Score = 33.9 bits (76), Expect = 0.27
 Identities = 31/111 (27%), Positives = 53/111 (47%)
 Frame = +1

Query: 109 MLAETELPSGLLPLKDIIECGYVEETGFVWLKQKKRVDHYFAKAGRHVSYATEVCAIAEK 288
           +L E +LP G+ P  D     + EET  + +      +  + K    + + T V    EK
Sbjct: 57  LLKEYDLPIGIFP-GDATNYEFDEETKKLTVLIPSICEVGY-KDSSVLKFTTTVTGHLEK 114

Query: 289 GRLKKISGVKAKEMLIWVNLHEICVDDPPTGKLHCKALGGLSRSFPVEAFE 441
           G+L  + G+K K ++IWV +  I  D     K++  A  G+ +S   +A+E
Sbjct: 115 GKLTDVEGIKTK-VMIWVKVTSISTD---ASKVYFTA--GMKKSRSRDAYE 159

>SYRB2_RHIME (Q9Z3Q1) Probable transcriptional regulator syrB2|
          Length = 151

 Score = 33.9 bits (76), Expect = 0.27
 Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
 Frame = +1

Query: 91  QEKTRLMLAETELPSGLLPLKDIIE-CGYVEETGFVWLKQKKRVDHYFAKAGRHVSYATE 267
           Q K +L L ET++  G + LKD I+  G  E+T + W +  K V+    KA + +    E
Sbjct: 59  QRKEKLKLIETQVTEGKVTLKDAIKSAGISEQTYYQWKRTVKPVEQ---KAEKRLPTGEE 115

Query: 268 VCAIA----EKGRLKKISGVKAK 324
           +  +     E  RL+K+   K +
Sbjct: 116 LADLVRLEEENQRLRKLLAEKLR 138

>UC25_MAIZE (P80631) Unknown protein from 2D-PAGE of etiolated coleoptile (Spot|
           77) (Fragment)
          Length = 15

 Score = 32.3 bits (72), Expect = 0.78
 Identities = 14/15 (93%), Positives = 15/15 (100%)
 Frame = +1

Query: 397 ALGGLSRSFPVEAFE 441
           A+GGLSRSFPVEAFE
Sbjct: 1   AIGGLSRSFPVEAFE 15

>THIC1_METAC (Q8TI28) Thiamine biosynthesis protein thiC 1|
          Length = 428

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = -1

Query: 461 TGRASAASNASTGKLRDRPPRALQWSLPVGGSSTQISWRLTQMSISLALTPE 306
           TG  ++   A  G +   P RA QW L +G +  ++ W   +   SLA+ PE
Sbjct: 343 TGVKTSRIAAHVGDMIKYPERARQWDLDMGRARRELDW---EKMYSLAIDPE 391

>THIC1_METMA (Q8PY39) Thiamine biosynthesis protein thiC 1|
          Length = 428

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = -1

Query: 461 TGRASAASNASTGKLRDRPPRALQWSLPVGGSSTQISWRLTQMSISLALTPE 306
           TG  ++   A  G +   P RA QW L +G +   + W   +   SLAL PE
Sbjct: 343 TGVKTSKIAAHIGDMVKYPERARQWDLDMGRARRDLDW---EKMYSLALDPE 391

>SYRB_RHISN (P55361) Probable transcriptional regulator syrB|
          Length = 148

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +1

Query: 103 RLMLAETELPSGLLPLKDIIE-CGYVEETGFVWLKQKKRVD 222
           +L L E E+  G   LKD I+  G  E+T +VW K  K  D
Sbjct: 60  KLNLIEAEVAQGNSTLKDAIKSAGISEQTYYVWKKSAKPAD 100

>YE63_SCHPO (O14249) Hypothetical protein C6G10.03c in chromosome I|
          Length = 428

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
 Frame = +1

Query: 172 YVEETGFVWLKQKKRVDHYFAK-AGRHVSYATEVCAIAEKGRLKKISGVKAKEMLIWVN- 345
           Y +  G  W + ++     +AK   R V +  +     EK   + +  V +K   I+ N 
Sbjct: 17  YTQTFGMSWRQWRQACSEEYAKQCEREVLHTVDFIRENEKDPERLVEVVDSK---IYDND 73

Query: 346 --LHEICVDDPPTGKLHCKAL 402
             +HE+CV D  TGK + +++
Sbjct: 74  GLVHEVCVSDKATGKANKRSI 94

>RNF25_HUMAN (Q96BH1) RING finger protein 25 (EC 6.3.2.-)|
          Length = 459

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -1

Query: 251 TCRPALAK*WSTRFFCLSHTKPVSSTYPHSMMSLSGRSPLG 129
           T  PA A+   +++ C +    V + YPH +  +S R+P G
Sbjct: 48  TLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNPRG 88

>RNF25_BOVIN (Q5E9N3) RING finger protein 25 (EC 6.3.2.-)|
          Length = 458

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -1

Query: 251 TCRPALAK*WSTRFFCLSHTKPVSSTYPHSMMSLSGRSPLG 129
           T  PA A+   +++ C +    V + YPH +  +S R+P G
Sbjct: 48  TLHPATAEDQDSQYVCFTLVLQVPTQYPHEVPQISIRNPRG 88

>COX2_WILSA (P06029) Cytochrome c oxidase subunit 2 precursor (EC 1.9.3.1)|
           (Cytochrome c oxidase polypeptide II)
          Length = 247

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = +1

Query: 214 RVDHYFAKAGRHVSYATEVCAIAEKGRLKKISGVKAKEMLIWVN 345
           +V     + G +    +E C +A      KI  V  KE L W+N
Sbjct: 202 QVSALIQREGVYYGMCSETCGVAHSAMPMKIEVVSTKEFLTWLN 245

>COX2_PICCA (P48871) Cytochrome c oxidase subunit 2 precursor (EC 1.9.3.1)|
           (Cytochrome c oxidase polypeptide II)
          Length = 247

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +1

Query: 214 RVDHYFAKAGRHVSYATEVCAIAEKGRLKKISGVKAKEMLIWVN 345
           +V     + G +    +E+C +A      K+  V  KE L W+N
Sbjct: 202 QVSALIQREGVYYGQCSELCGVAHSAMPIKVEAVSLKEFLTWLN 245

>CYAA_LEIDO (Q27675) Receptor-type adenylate cyclase A (EC 4.6.1.1) (ATP|
            pyrophosphate-lyase) (Adenylyl cyclase)
          Length = 1380

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -1

Query: 437  NASTGKLRDRPPRALQWSLPVGGSSTQISWRL 342
            +++ G +R R P +   SLP GGSS+   WR+
Sbjct: 1275 DSAAGGVRPRLPGSPVTSLPAGGSSSMREWRV 1306


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.135    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,301,383
Number of Sequences: 219361
Number of extensions: 806405
Number of successful extensions: 2570
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2569
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3812186532
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)