ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags31o23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 385 e-103
2dbj|AK109434.2| Oryza sativa (japonica cultivar-group) cDNA clon... 385 e-103
3dbj|AK069514.1| Oryza sativa (japonica cultivar-group) cDNA clon... 385 e-103
4dbj|AK060891.1| Oryza sativa (japonica cultivar-group) cDNA clon... 385 e-103
5gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 385 e-103
6emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC OSJNBb... 385 e-103
7dbj|AK105895.1| Oryza sativa (japonica cultivar-group) cDNA clon... 377 e-101
8ref|NM_192397.1| Oryza sativa (japonica cultivar-group), predic... 54 5e-04
9dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
10dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
11dbj|AP003709.2| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
12gb|AY106955.1| Zea mays PCO141660 mRNA sequence 52 0.002
13gb|AC135190.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.11
14dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
15dbj|AK119461.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
16gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.11
17ref|NM_194194.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.44
18ref|NM_194186.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.44
19ref|NM_194169.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.44
20gb|AF296010.1| Unidentified bacterium SM-A75 RNAase P (rnpB) gen... 44 0.44
21gb|CP000133.1| Rhizobium etli CFN 42, complete genome 44 0.44
22dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.44
23dbj|AP003810.6| Oryza sativa (japonica cultivar-group) genomic D... 44 0.44
24gb|U28110.1|UEU28110 Unidentified eubacterium clone PS#27 ribonu... 44 0.44
25dbj|AP004262.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.44
26gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 44 0.44
27gb|AY168440.1| Oryza sativa (indica cultivar-group) IPK (ipk) ge... 42 1.8
28gb|AF312920.1| Oryza sativa protein kinase-like protein mRNA, co... 42 1.8
29gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 42 1.8
30ref|NM_194192.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.8
31ref|NM_194170.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.8
32ref|XM_955545.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.8
33ref|XM_330340.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.8
34gb|AY596538.1| Saccharum officinarum clone SCCCRZ2C04A03, comple... 42 1.8
35gb|AC144700.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
36gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
37gb|AY597278.1| Pseudomonas viridiflava strain PNA3.3a pathogenic... 42 1.8
38gb|AY597277.1| Pseudomonas viridiflava strain LP23.1a pathogenic... 42 1.8
39gb|AC116071.5| Rattus norvegicus 3 BAC CH230-230O7 (Children's H... 42 1.8
40emb|BX294009.1|NC64C2 Neurospora crassa DNA linkage group V Cosm... 42 1.8
41ref|XM_215812.3| PREDICTED: Rattus norvegicus transformation rel... 42 1.8
42dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 42 1.8
43dbj|AK072981.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
44gb|AY110901.1| Zea mays CL7341_1 mRNA sequence 42 1.8
45gb|L24492.1|REREUTPBC Rhodococcus erythropolis ORF1, ethanolamin... 42 1.8
46emb|BX842241.1|CNS0B0PM Oryza sativa chromosome 12, . Partial se... 42 1.8
47emb|AL845332.11| Mouse DNA sequence from clone RP23-326D18 on ch... 42 1.8
48gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, ... 40 6.9
49ref|NM_188295.1| Oryza sativa (japonica cultivar-group), predic... 40 6.9
50gb|BT016587.1| Zea mays clone Contig420 mRNA sequence 40 6.9
51gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 6.9
52gb|AC102505.8| Mus musculus chromosome 1, clone RP24-73K7, compl... 40 6.9
53ref|XM_588936.2| PREDICTED: Bos taurus similar to Potassium volt... 40 6.9
54ref|XM_656612.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 6.9
55gb|AY049859.1| Urobatis jamaicensis 5.8S ribosomal RNA gene, and... 40 6.9
56emb|AJ698944.1| Equus caballus csf1R gene, smf gene, tigd14 gene... 40 6.9
57gb|AC115361.5| Mus musculus BAC clone RP24-76P12 from chromosome... 40 6.9
58gb|AC124367.4| Mus musculus BAC clone RP24-545D20 from chromosom... 40 6.9
59gb|AC124720.3| Mus musculus BAC clone RP23-387F14 from chromosom... 40 6.9
60gb|AC091001.3| Papio anubis clone RP41-36M16, complete sequence 40 6.9
61gb|AC107781.9| Mus musculus, clone RP23-56O1, complete sequence 40 6.9
62emb|AL445664.14| Human DNA sequence from clone RP11-343J18 on ch... 40 6.9
63gb|AC087442.13| Homo sapiens chromosome 11, clone RP11-495O11, c... 40 6.9
64emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 6.9
65emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete ... 40 6.9
66emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete ... 40 6.9
67gb|AC106845.8| Homo sapiens chromosome 8, clone RP11-183J19, com... 40 6.9
68gb|AC103855.3| Homo sapiens chromosome 11, clone RP11-958J22, co... 40 6.9
69emb|BX469902.7| Zebrafish DNA sequence from clone CH211-277G23 i... 40 6.9
70gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 6.9
71gb|AE005877.1| Caulobacter crescentus CB15 section 203 of 359 of... 40 6.9
72gb|AE005694.1| Caulobacter crescentus CB15 section 20 of 359 of ... 40 6.9
73ref|NM_135440.1| Drosophila melanogaster CG4450-RA (CG4450), mRNA 40 6.9
74gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 6.9
75gb|CP000249.1| Frankia sp. CcI3, complete genome 40 6.9
76gb|AC092492.1|AC092492 Drosophila melanogaster, chromosome 2L, r... 40 6.9
77gb|AC007299.18|AC007299 Drosophila melanogaster, chromosome 2L, ... 40 6.9
78gb|AC062032.5| Homo sapiens BAC clone RP11-515K12 from 2, comple... 40 6.9
79dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
80dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 6.9
81gb|AF056943.1|AF056943 Oryctolagus cuniculus potassium channel K... 40 6.9
82ref|XM_317267.2| Anopheles gambiae str. PEST ENSANGP00000021912 ... 40 6.9
83gb|AE003624.3| Drosophila melanogaster chromosome 2L, section 33... 40 6.9
84dbj|D45025.1|RABPCA Oryctolagus cuniculus mRNA for potassium cha... 40 6.9
85gb|AC126445.5| Mus musculus BAC clone RP23-307P24 from 8, comple... 40 6.9
86gb|AC158363.2| Mus musculus BAC clone RP23-214J3 from chromosome... 40 6.9
87emb|AL935175.6| Mouse DNA sequence from clone RP23-397E13 on chr... 40 6.9 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  385 bits (194), Expect = e-103
 Identities = 371/430 (86%)
 Strand = Plus / Plus

                                                                            
Query: 15       gccggcgacgatgccgatgctcatccccgacgacgttcgcgccaaggcggagatctacac 74
                ||||||||||||| || ||   ||||| |||||||| || || ||||||||| | |||  
Sbjct: 23149214 gccggcgacgatgacgctgacgatcccggacgacgtgcgggcgaaggcggaggtgtacgt 23149273

                                                                            
Query: 75       cggcgacgcggcggggcaggagaagacgcggctgatgctggcggagacggagctccccag 134
                |||||||| ||| ||||||||||||||||||||| |||||| |||||||| |||||||||
Sbjct: 23149274 cggcgacgaggccgggcaggagaagacgcggctgctgctggaggagacggggctccccag 23149333

                                                                            
Query: 135      cgggctcctgccactcaaggacatcatcgagtgcgggtacgttgaggagaccggcttcgt 194
                ||| ||||| || |||   ||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 23149334 cggcctcctccctctccgcgacatcatcgagtgcggctacgtggaggagaccgggttcgt 23149393

                                                                            
Query: 195      gtggctcaagcagaagaagcgggtggaccactacttcgccaaggccggccggcacgtctc 254
                |||||| ||||||  |  |  ||||||||||| |||||||||||||||||| ||||||  
Sbjct: 23149394 gtggctgaagcagcggcggaaggtggaccacttcttcgccaaggccggccgccacgtcag 23149453

                                                                            
Query: 255      ctacgccaccgaggtctgcgccatcgccgagaagggccgcctgaagaagatctccggcgt 314
                ||||||| ||||||||| |||| |||||||||||||||||||    |||||| |||||||
Sbjct: 23149454 ctacgccgccgaggtctccgccgtcgccgagaagggccgcctccgcaagatcaccggcgt 23149513

                                                                            
Query: 315      caaggccaaggagatgctcatctgggtcaacctccacgagatctgcgtcgacgacccgcc 374
                ||||||||||||| | ||||||||||||| |||||||||||||  |||||||||||| ||
Sbjct: 23149514 caaggccaaggagctcctcatctgggtcaccctccacgagatcgccgtcgacgacccccc 23149573

                                                                            
Query: 375      caccggcaagctccactgcaaggccctcggcggcctgtcccgcagcttccccgtggaggc 434
                |||||||||||||  |||||||||| |||||||||| ||||||||||||||||| || ||
Sbjct: 23149574 caccggcaagctcacctgcaaggccatcggcggcctctcccgcagcttccccgtcgacgc 23149633

                          
Query: 435      gttcgaggcc 444
                 |||||||||
Sbjct: 23149634 cttcgaggcc 23149643



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 429     ggaggcgttcgaggccgccgacgcc 453
               |||||||||||||| ||||||||||
Sbjct: 7112008 ggaggcgttcgaggacgccgacgcc 7112032
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>dbj|AK109434.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-G11, full
           insert sequence
          Length = 960

 Score =  385 bits (194), Expect = e-103
 Identities = 371/430 (86%)
 Strand = Plus / Plus

                                                                       
Query: 15  gccggcgacgatgccgatgctcatccccgacgacgttcgcgccaaggcggagatctacac 74
           ||||||||||||| || ||   ||||| |||||||| || || ||||||||| | |||  
Sbjct: 81  gccggcgacgatgacgctgacgatcccggacgacgtgcgggcgaaggcggaggtgtacgt 140

                                                                       
Query: 75  cggcgacgcggcggggcaggagaagacgcggctgatgctggcggagacggagctccccag 134
           |||||||| ||| ||||||||||||||||||||| |||||| |||||||| |||||||||
Sbjct: 141 cggcgacgaggccgggcaggagaagacgcggctgctgctggaggagacggggctccccag 200

                                                                       
Query: 135 cgggctcctgccactcaaggacatcatcgagtgcgggtacgttgaggagaccggcttcgt 194
           ||| ||||| || |||   ||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 201 cggcctcctccctctccgcgacatcatcgagtgcggctacgtggaggagaccgggttcgt 260

                                                                       
Query: 195 gtggctcaagcagaagaagcgggtggaccactacttcgccaaggccggccggcacgtctc 254
           |||||| ||||||  |  |  ||||||||||| |||||||||||||||||| ||||||  
Sbjct: 261 gtggctgaagcagcggcggaaggtggaccacttcttcgccaaggccggccgccacgtcag 320

                                                                       
Query: 255 ctacgccaccgaggtctgcgccatcgccgagaagggccgcctgaagaagatctccggcgt 314
           ||||||| ||||||||| |||| |||||||||||||||||||    |||||| |||||||
Sbjct: 321 ctacgccgccgaggtctccgccgtcgccgagaagggccgcctccgcaagatcaccggcgt 380

                                                                       
Query: 315 caaggccaaggagatgctcatctgggtcaacctccacgagatctgcgtcgacgacccgcc 374
           ||||||||||||| | ||||||||||||| |||||||||||||  |||||||||||| ||
Sbjct: 381 caaggccaaggagctcctcatctgggtcaccctccacgagatcgccgtcgacgacccccc 440

                                                                       
Query: 375 caccggcaagctccactgcaaggccctcggcggcctgtcccgcagcttccccgtggaggc 434
           |||||||||||||  |||||||||| |||||||||| ||||||||||||||||| || ||
Sbjct: 441 caccggcaagctcacctgcaaggccatcggcggcctctcccgcagcttccccgtcgacgc 500

                     
Query: 435 gttcgaggcc 444
            |||||||||
Sbjct: 501 cttcgaggcc 510
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>dbj|AK069514.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020B07, full
           insert sequence
          Length = 1046

 Score =  385 bits (194), Expect = e-103
 Identities = 371/430 (86%)
 Strand = Plus / Plus

                                                                       
Query: 15  gccggcgacgatgccgatgctcatccccgacgacgttcgcgccaaggcggagatctacac 74
           ||||||||||||| || ||   ||||| |||||||| || || ||||||||| | |||  
Sbjct: 82  gccggcgacgatgacgctgacgatcccggacgacgtgcgggcgaaggcggaggtgtacgt 141

                                                                       
Query: 75  cggcgacgcggcggggcaggagaagacgcggctgatgctggcggagacggagctccccag 134
           |||||||| ||| ||||||||||||||||||||| |||||| |||||||| |||||||||
Sbjct: 142 cggcgacgaggccgggcaggagaagacgcggctgctgctggaggagacggggctccccag 201

                                                                       
Query: 135 cgggctcctgccactcaaggacatcatcgagtgcgggtacgttgaggagaccggcttcgt 194
           ||| ||||| || |||   ||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 202 cggcctcctccctctccgcgacatcatcgagtgcggctacgtggaggagaccgggttcgt 261

                                                                       
Query: 195 gtggctcaagcagaagaagcgggtggaccactacttcgccaaggccggccggcacgtctc 254
           |||||| ||||||  |  |  ||||||||||| |||||||||||||||||| ||||||  
Sbjct: 262 gtggctgaagcagcggcggaaggtggaccacttcttcgccaaggccggccgccacgtcag 321

                                                                       
Query: 255 ctacgccaccgaggtctgcgccatcgccgagaagggccgcctgaagaagatctccggcgt 314
           ||||||| ||||||||| |||| |||||||||||||||||||    |||||| |||||||
Sbjct: 322 ctacgccgccgaggtctccgccgtcgccgagaagggccgcctccgcaagatcaccggcgt 381

                                                                       
Query: 315 caaggccaaggagatgctcatctgggtcaacctccacgagatctgcgtcgacgacccgcc 374
           ||||||||||||| | ||||||||||||| |||||||||||||  |||||||||||| ||
Sbjct: 382 caaggccaaggagctcctcatctgggtcaccctccacgagatcgccgtcgacgacccccc 441

                                                                       
Query: 375 caccggcaagctccactgcaaggccctcggcggcctgtcccgcagcttccccgtggaggc 434
           |||||||||||||  |||||||||| |||||||||| ||||||||||||||||| || ||
Sbjct: 442 caccggcaagctcacctgcaaggccatcggcggcctctcccgcagcttccccgtcgacgc 501

                     
Query: 435 gttcgaggcc 444
            |||||||||
Sbjct: 502 cttcgaggcc 511
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>dbj|AK060891.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-C01, full
           insert sequence
          Length = 1001

 Score =  385 bits (194), Expect = e-103
 Identities = 371/430 (86%)
 Strand = Plus / Plus

                                                                       
Query: 15  gccggcgacgatgccgatgctcatccccgacgacgttcgcgccaaggcggagatctacac 74
           ||||||||||||| || ||   ||||| |||||||| || || ||||||||| | |||  
Sbjct: 83  gccggcgacgatgacgctgacgatcccggacgacgtgcgggcgaaggcggaggtgtacgt 142

                                                                       
Query: 75  cggcgacgcggcggggcaggagaagacgcggctgatgctggcggagacggagctccccag 134
           |||||||| ||| ||||||||||||||||||||| |||||| |||||||| |||||||||
Sbjct: 143 cggcgacgaggccgggcaggagaagacgcggctgctgctggaggagacggggctccccag 202

                                                                       
Query: 135 cgggctcctgccactcaaggacatcatcgagtgcgggtacgttgaggagaccggcttcgt 194
           ||| ||||| || |||   ||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 203 cggcctcctccctctccgcgacatcatcgagtgcggctacgtggaggagaccgggttcgt 262

                                                                       
Query: 195 gtggctcaagcagaagaagcgggtggaccactacttcgccaaggccggccggcacgtctc 254
           |||||| ||||||  |  |  ||||||||||| |||||||||||||||||| ||||||  
Sbjct: 263 gtggctgaagcagcggcggaaggtggaccacttcttcgccaaggccggccgccacgtcag 322

                                                                       
Query: 255 ctacgccaccgaggtctgcgccatcgccgagaagggccgcctgaagaagatctccggcgt 314
           ||||||| ||||||||| |||| |||||||||||||||||||    |||||| |||||||
Sbjct: 323 ctacgccgccgaggtctccgccgtcgccgagaagggccgcctccgcaagatcaccggcgt 382

                                                                       
Query: 315 caaggccaaggagatgctcatctgggtcaacctccacgagatctgcgtcgacgacccgcc 374
           ||||||||||||| | ||||||||||||| |||||||||||||  |||||||||||| ||
Sbjct: 383 caaggccaaggagctcctcatctgggtcaccctccacgagatcgccgtcgacgacccccc 442

                                                                       
Query: 375 caccggcaagctccactgcaaggccctcggcggcctgtcccgcagcttccccgtggaggc 434
           |||||||||||||  |||||||||| |||||||||| ||||||||||||||||| || ||
Sbjct: 443 caccggcaagctcacctgcaaggccatcggcggcctctcccgcagcttccccgtcgacgc 502

                     
Query: 435 gttcgaggcc 444
            |||||||||
Sbjct: 503 cttcgaggcc 512
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  385 bits (194), Expect = e-103
 Identities = 371/430 (86%)
 Strand = Plus / Plus

                                                                            
Query: 15       gccggcgacgatgccgatgctcatccccgacgacgttcgcgccaaggcggagatctacac 74
                ||||||||||||| || ||   ||||| |||||||| || || ||||||||| | |||  
Sbjct: 23077405 gccggcgacgatgacgctgacgatcccggacgacgtgcgggcgaaggcggaggtgtacgt 23077464

                                                                            
Query: 75       cggcgacgcggcggggcaggagaagacgcggctgatgctggcggagacggagctccccag 134
                |||||||| ||| ||||||||||||||||||||| |||||| |||||||| |||||||||
Sbjct: 23077465 cggcgacgaggccgggcaggagaagacgcggctgctgctggaggagacggggctccccag 23077524

                                                                            
Query: 135      cgggctcctgccactcaaggacatcatcgagtgcgggtacgttgaggagaccggcttcgt 194
                ||| ||||| || |||   ||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 23077525 cggcctcctccctctccgcgacatcatcgagtgcggctacgtggaggagaccgggttcgt 23077584

                                                                            
Query: 195      gtggctcaagcagaagaagcgggtggaccactacttcgccaaggccggccggcacgtctc 254
                |||||| ||||||  |  |  ||||||||||| |||||||||||||||||| ||||||  
Sbjct: 23077585 gtggctgaagcagcggcggaaggtggaccacttcttcgccaaggccggccgccacgtcag 23077644

                                                                            
Query: 255      ctacgccaccgaggtctgcgccatcgccgagaagggccgcctgaagaagatctccggcgt 314
                ||||||| ||||||||| |||| |||||||||||||||||||    |||||| |||||||
Sbjct: 23077645 ctacgccgccgaggtctccgccgtcgccgagaagggccgcctccgcaagatcaccggcgt 23077704

                                                                            
Query: 315      caaggccaaggagatgctcatctgggtcaacctccacgagatctgcgtcgacgacccgcc 374
                ||||||||||||| | ||||||||||||| |||||||||||||  |||||||||||| ||
Sbjct: 23077705 caaggccaaggagctcctcatctgggtcaccctccacgagatcgccgtcgacgacccccc 23077764

                                                                            
Query: 375      caccggcaagctccactgcaaggccctcggcggcctgtcccgcagcttccccgtggaggc 434
                |||||||||||||  |||||||||| |||||||||| ||||||||||||||||| || ||
Sbjct: 23077765 caccggcaagctcacctgcaaggccatcggcggcctctcccgcagcttccccgtcgacgc 23077824

                          
Query: 435      gttcgaggcc 444
                 |||||||||
Sbjct: 23077825 cttcgaggcc 23077834



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 429     ggaggcgttcgaggccgccgacgcc 453
               |||||||||||||| ||||||||||
Sbjct: 7111887 ggaggcgttcgaggacgccgacgcc 7111911
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>emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC OSJNBb0076G11 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 135323

 Score =  385 bits (194), Expect = e-103
 Identities = 371/430 (86%)
 Strand = Plus / Minus

                                                                         
Query: 15    gccggcgacgatgccgatgctcatccccgacgacgttcgcgccaaggcggagatctacac 74
             ||||||||||||| || ||   ||||| |||||||| || || ||||||||| | |||  
Sbjct: 29183 gccggcgacgatgacgctgacgatcccggacgacgtgcgggcgaaggcggaggtgtacgt 29124

                                                                         
Query: 75    cggcgacgcggcggggcaggagaagacgcggctgatgctggcggagacggagctccccag 134
             |||||||| ||| ||||||||||||||||||||| |||||| |||||||| |||||||||
Sbjct: 29123 cggcgacgaggccgggcaggagaagacgcggctgctgctggaggagacggggctccccag 29064

                                                                         
Query: 135   cgggctcctgccactcaaggacatcatcgagtgcgggtacgttgaggagaccggcttcgt 194
             ||| ||||| || |||   ||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 29063 cggcctcctccctctccgcgacatcatcgagtgcggctacgtggaggagaccgggttcgt 29004

                                                                         
Query: 195   gtggctcaagcagaagaagcgggtggaccactacttcgccaaggccggccggcacgtctc 254
             |||||| ||||||  |  |  ||||||||||| |||||||||||||||||| ||||||  
Sbjct: 29003 gtggctgaagcagcggcggaaggtggaccacttcttcgccaaggccggccgccacgtcag 28944

                                                                         
Query: 255   ctacgccaccgaggtctgcgccatcgccgagaagggccgcctgaagaagatctccggcgt 314
             ||||||| ||||||||| |||| |||||||||||||||||||    |||||| |||||||
Sbjct: 28943 ctacgccgccgaggtctccgccgtcgccgagaagggccgcctccgcaagatcaccggcgt 28884

                                                                         
Query: 315   caaggccaaggagatgctcatctgggtcaacctccacgagatctgcgtcgacgacccgcc 374
             ||||||||||||| | ||||||||||||| |||||||||||||  |||||||||||| ||
Sbjct: 28883 caaggccaaggagctcctcatctgggtcaccctccacgagatcgccgtcgacgacccccc 28824

                                                                         
Query: 375   caccggcaagctccactgcaaggccctcggcggcctgtcccgcagcttccccgtggaggc 434
             |||||||||||||  |||||||||| |||||||||| ||||||||||||||||| || ||
Sbjct: 28823 caccggcaagctcacctgcaaggccatcggcggcctctcccgcagcttccccgtcgacgc 28764

                       
Query: 435   gttcgaggcc 444
              |||||||||
Sbjct: 28763 cttcgaggcc 28754
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>dbj|AK105895.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-E12, full
           insert sequence
          Length = 1044

 Score =  377 bits (190), Expect = e-101
 Identities = 370/430 (86%)
 Strand = Plus / Plus

                                                                       
Query: 15  gccggcgacgatgccgatgctcatccccgacgacgttcgcgccaaggcggagatctacac 74
           ||||||||||||| || ||   ||||| |||||||| || || ||||||||| | |||  
Sbjct: 76  gccggcgacgatgacgctgacgatcccggacgacgtgcgggcgaaggcggaggtgtacgt 135

                                                                       
Query: 75  cggcgacgcggcggggcaggagaagacgcggctgatgctggcggagacggagctccccag 134
           |||||||| ||| ||||||||||||||||||||| |||||| |||||||| |||||||||
Sbjct: 136 cggcgacgaggccgggcaggagaagacgcggctgctgctggaggagacggggctccccag 195

                                                                       
Query: 135 cgggctcctgccactcaaggacatcatcgagtgcgggtacgttgaggagaccggcttcgt 194
           ||| ||||| || |||   ||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 196 cggcctcctccctctccgcgacatcatcgagtgcggctacgtggaggagaccgggttcgt 255

                                                                       
Query: 195 gtggctcaagcagaagaagcgggtggaccactacttcgccaaggccggccggcacgtctc 254
           |||||| ||||||  |  |  ||||||||||| |||||||||||||||||| ||||||  
Sbjct: 256 gtggctgaagcagcggcggaaggtggaccacttcttcgccaaggccggccgccacgtcag 315

                                                                       
Query: 255 ctacgccaccgaggtctgcgccatcgccgagaagggccgcctgaagaagatctccggcgt 314
           ||||||| ||||||||| |||| |||||||||||||||||||    |||||| |||||||
Sbjct: 316 ctacgccgccgaggtctccgccgtcgccgagaagggccgcctccgcaagatcaccggcgt 375

                                                                       
Query: 315 caaggccaaggagatgctcatctgggtcaacctccacgagatctgcgtcgacgacccgcc 374
           ||||||||||||| | ||||||||||||| |||||||||||||  |||||||||| | ||
Sbjct: 376 caaggccaaggagctcctcatctgggtcaccctccacgagatcgccgtcgacgacacccc 435

                                                                       
Query: 375 caccggcaagctccactgcaaggccctcggcggcctgtcccgcagcttccccgtggaggc 434
           |||||||||||||  |||||||||| |||||||||| ||||||||||||||||| || ||
Sbjct: 436 caccggcaagctcacctgcaaggccatcggcggcctctcccgcagcttccccgtcgacgc 495

                     
Query: 435 gttcgaggcc 444
            |||||||||
Sbjct: 496 cttcgaggcc 505
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>ref|NM_192397.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 411

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 350 acgagatctgcgtcgacgacccgcccaccggcaagctccactgcaag 396
           ||||||||  ||||||| ||||||||||||||||| |||||| ||||
Sbjct: 308 acgagatcaccgtcgacaacccgcccaccggcaagatccacttcaag 354
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                               
Query: 350      acgagatctgcgtcgacgacccgcccaccggcaagctccactgcaag 396
                ||||||||  ||||||| ||||||||||||||||| |||||| ||||
Sbjct: 26391829 acgagatcaccgtcgacaacccgcccaccggcaagatccacttcaag 26391875



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 263     ccgaggtctgcgccatcgccgagaaggg 290
               |||||| | |||||||||||||||||||
Sbjct: 5529512 ccgaggaccgcgccatcgccgagaaggg 5529485
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>dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0032K15
          Length = 126195

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                            
Query: 350   acgagatctgcgtcgacgacccgcccaccggcaagctccactgcaag 396
             ||||||||  ||||||| ||||||||||||||||| |||||| ||||
Sbjct: 65694 acgagatcaccgtcgacaacccgcccaccggcaagatccacttcaag 65740
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>dbj|AP003709.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
           BAC clone:OSJNBb0006H05
          Length = 154821

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 350 acgagatctgcgtcgacgacccgcccaccggcaagctccactgcaag 396
           ||||||||  ||||||| ||||||||||||||||| |||||| ||||
Sbjct: 448 acgagatcaccgtcgacaacccgcccaccggcaagatccacttcaag 494
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>gb|AY106955.1| Zea mays PCO141660 mRNA sequence
          Length = 630

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 363 cgacgacccgcccaccggcaagctccactgcaag 396
           |||||||||||||||||||||| |||||| ||||
Sbjct: 396 cgacgacccgcccaccggcaagatccacttcaag 429
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>gb|AC135190.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0064H09, complete sequence
          Length = 146742

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                         
Query: 151   aaggacatcatcgagtgcgggtacgttgaggagaccggcttcgtgtggctcaagcagaag 210
             |||||||| || ||||| || || |||||||| || || || |||||||||||||| |||
Sbjct: 77048 aaggacataatggagtgtggctatgttgaggaaactggatttgtgtggctcaagcaaaag 77107

                
Query: 211   aag 213
             |||
Sbjct: 77108 aag 77110
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                            
Query: 151      aaggacatcatcgagtgcgggtacgttgaggagaccggcttcgtgtggctcaagcagaag 210
                |||||||| || ||||| || || |||||||| || || || |||||||||||||| |||
Sbjct: 26772418 aaggacataatggagtgtggctatgttgaggaaactggatttgtgtggctcaagcaaaag 26772477

                   
Query: 211      aag 213
                |||
Sbjct: 26772478 aag 26772480



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 249      cgtctcctacgccaccgaggt 269
                |||||||||||||||||||||
Sbjct: 21797762 cgtctcctacgccaccgaggt 21797782
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>dbj|AK119461.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-133-E10, full
            insert sequence
          Length = 3007

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                        
Query: 151  aaggacatcatcgagtgcgggtacgttgaggagaccggcttcgtgtggctcaagcagaag 210
            |||||||| || ||||| || || |||||||| || || || |||||||||||||| |||
Sbjct: 2507 aaggacataatggagtgtggctatgttgaggaaactggatttgtgtggctcaagcaaaag 2448

               
Query: 211  aag 213
            |||
Sbjct: 2447 aag 2445
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                            
Query: 151      aaggacatcatcgagtgcgggtacgttgaggagaccggcttcgtgtggctcaagcagaag 210
                |||||||| || ||||| || || |||||||| || || || |||||||||||||| |||
Sbjct: 27099653 aaggacataatggagtgtggctatgttgaggaaactggatttgtgtggctcaagcaaaag 27099712

                   
Query: 211      aag 213
                |||
Sbjct: 27099713 aag 27099715



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 249      cgtctcctacgccaccgaggt 269
                |||||||||||||||||||||
Sbjct: 22107961 cgtctcctacgccaccgaggt 22107981
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>ref|NM_194194.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 429

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 295 ctgaagaagatctccggcgtcaaggccaaggagatgct 332
           |||||||||||| ||||||| ||| |||||||| ||||
Sbjct: 271 ctgaagaagatcaccggcgtgaagaccaaggagctgct 308
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>ref|NM_194186.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 432

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 295 ctgaagaagatctccggcgtcaaggccaaggagatgct 332
           |||||||||||| ||||||| ||| |||||||| ||||
Sbjct: 274 ctgaagaagatcgccggcgtgaagaccaaggagctgct 311
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>ref|NM_194169.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 429

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 295 ctgaagaagatctccggcgtcaaggccaaggagatgct 332
           |||||||||||| ||||||| ||| |||||||| ||||
Sbjct: 271 ctgaagaagatcaccggcgtgaagaccaaggagctgct 308
to top
>gb|AF296010.1| Unidentified bacterium SM-A75 RNAase P (rnpB) gene, partial
           sequence
          Length = 289

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 462 gcccgtcaccggacgcctcaag 483
           ||||||||||||||||||||||
Sbjct: 249 gcccgtcaccggacgcctcaag 228
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 14      ggccggcgacgatgccgatgct 35
               ||||||||||||||||||||||
Sbjct: 2829201 ggccggcgacgatgccgatgct 2829222



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 277     atcgccgagaagggccgcct 296
               ||||||||||||||||||||
Sbjct: 2403241 atcgccgagaagggccgcct 2403260



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 53     gcgccaaggcggagatctac 72
              ||||||||||||||||||||
Sbjct: 632049 gcgccaaggcggagatctac 632068
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                     
Query: 295     ctgaagaagatctccggcgtcaaggccaaggagatgct 332
               |||||||||||| ||||||| ||| |||||||| ||||
Sbjct: 1094414 ctgaagaagatcaccggcgtgaagaccaaggagctgct 1094377



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                     
Query: 295     ctgaagaagatctccggcgtcaaggccaaggagatgct 332
               |||||||||||| ||||||| ||| |||||||| ||||
Sbjct: 1088822 ctgaagaagatcaccggcgtgaagaccaaggagctgct 1088785



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                     
Query: 295     ctgaagaagatctccggcgtcaaggccaaggagatgct 332
               |||||||||||| ||||||| ||| |||||||| ||||
Sbjct: 1066400 ctgaagaagatcgccggcgtgaagaccaaggagctgct 1066437



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                    
Query: 295    ctgaagaagatctccggcgtcaaggccaaggagatgct 332
              |||||||||||| ||||||| ||| |||||||| ||||
Sbjct: 972212 ctgaagaagatcaccggcgtgaagaccaaggagctgct 972249



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 295     ctgaagaagatctccggcgtcaaggccaaggag 327
               |||||||||||| ||||||| ||| ||||||||
Sbjct: 1084960 ctgaagaagatcgccggcgtgaagaccaaggag 1084928



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 295    ctgaagaagatctccggcgtcaaggccaaggag 327
              |||||||||||| ||||||| ||| ||||||||
Sbjct: 975591 ctgaagaagatcaccggcgtgaagaccaaggag 975623
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>dbj|AP003810.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1119_A04
          Length = 128906

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 295   ctgaagaagatctccggcgtcaaggccaaggagatgct 332
             |||||||||||| ||||||| ||| |||||||| ||||
Sbjct: 76559 ctgaagaagatcaccggcgtgaagaccaaggagctgct 76596



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 295   ctgaagaagatctccggcgtcaaggccaaggag 327
             |||||||||||| ||||||| ||| ||||||||
Sbjct: 79938 ctgaagaagatcaccggcgtgaagaccaaggag 79970
to top
>gb|U28110.1|UEU28110 Unidentified eubacterium clone PS#27 ribonuclease P RNA (rnpB)
           gene, partial sequence
          Length = 342

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 462 gcccgtcaccggacgcctcaag 483
           ||||||||||||||||||||||
Sbjct: 289 gcccgtcaccggacgcctcaag 268
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>dbj|AP004262.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0022B05
          Length = 151317

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 295   ctgaagaagatctccggcgtcaaggccaaggagatgct 332
             |||||||||||| ||||||| ||| |||||||| ||||
Sbjct: 92002 ctgaagaagatcaccggcgtgaagaccaaggagctgct 91965



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 295   ctgaagaagatctccggcgtcaaggccaaggagatgct 332
             |||||||||||| ||||||| ||| |||||||| ||||
Sbjct: 86410 ctgaagaagatcaccggcgtgaagaccaaggagctgct 86373



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 295   ctgaagaagatctccggcgtcaaggccaaggagatgct 332
             |||||||||||| ||||||| ||| |||||||| ||||
Sbjct: 63988 ctgaagaagatcgccggcgtgaagaccaaggagctgct 64025



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 295   ctgaagaagatctccggcgtcaaggccaaggag 327
             |||||||||||| ||||||| ||| ||||||||
Sbjct: 82548 ctgaagaagatcgccggcgtgaagaccaaggag 82516
to top
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 72      caccggcgacgcggcggggcag 93
               ||||||||||||||||||||||
Sbjct: 3025158 caccggcgacgcggcggggcag 3025179
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>gb|AY168440.1| Oryza sativa (indica cultivar-group) IPK (ipk) gene, complete cds
          Length = 5207

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 429  ggaggcgttcgaggccgccgacgcc 453
            |||||||||||||| ||||||||||
Sbjct: 2062 ggaggcgttcgaggacgccgacgcc 2086
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>gb|AF312920.1| Oryza sativa protein kinase-like protein mRNA, complete cds
          Length = 2138

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 429 ggaggcgttcgaggccgccgacgcc 453
           |||||||||||||| ||||||||||
Sbjct: 648 ggaggcgttcgaggacgccgacgcc 672
to top
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 12      ccggccggcgacgatgccgat 32
               |||||||||||||||||||||
Sbjct: 2492061 ccggccggcgacgatgccgat 2492041
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>ref|NM_194192.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 429

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 295 ctgaagaagatctccggcgtcaaggccaaggag 327
           |||||||||||| ||||||| ||| ||||||||
Sbjct: 271 ctgaagaagatcgccggcgtgaagaccaaggag 303
to top
>ref|NM_194170.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 429

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 295 ctgaagaagatctccggcgtcaaggccaaggag 327
           |||||||||||| ||||||| ||| ||||||||
Sbjct: 271 ctgaagaagatcaccggcgtgaagaccaaggag 303
to top
>ref|XM_955545.1| Neurospora crassa OR74A hypothetical protein (NCU09691.1) partial
           mRNA
          Length = 393

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 353 agatctgcgtcgacgacccgc 373
           |||||||||||||||||||||
Sbjct: 191 agatctgcgtcgacgacccgc 211
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>ref|XM_330340.1| Neurospora crassa OR74A hypothetical protein (NCU09691.1) partial
           mRNA
          Length = 393

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 353 agatctgcgtcgacgacccgc 373
           |||||||||||||||||||||
Sbjct: 191 agatctgcgtcgacgacccgc 211
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>gb|AY596538.1| Saccharum officinarum clone SCCCRZ2C04A03, complete sequence
          Length = 1227

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 442 gccgccgacgccctgcccgtgcccg 466
           ||||||| |||||||||||||||||
Sbjct: 498 gccgccggcgccctgcccgtgcccg 522
to top
>gb|AC144700.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
            OSJNBa0017H17, complete sequence
          Length = 156331

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 249  cgtctcctacgccaccgaggt 269
            |||||||||||||||||||||
Sbjct: 8605 cgtctcctacgccaccgaggt 8625
to top
>gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0074L11, complete sequence
          Length = 180703

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 249    cgtctcctacgccaccgaggt 269
              |||||||||||||||||||||
Sbjct: 149815 cgtctcctacgccaccgaggt 149835
to top
>gb|AY597278.1| Pseudomonas viridiflava strain PNA3.3a pathogenicity island
             PAI-Region-1, partial sequence
          Length = 54118

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 103   cggctgatgctggcggagacg 123
             |||||||||||||||||||||
Sbjct: 18193 cggctgatgctggcggagacg 18173
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>gb|AY597277.1| Pseudomonas viridiflava strain LP23.1a pathogenicity island
             PAI-Region-1, partial sequence
          Length = 60908

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 103   cggctgatgctggcggagacg 123
             |||||||||||||||||||||
Sbjct: 23437 cggctgatgctggcggagacg 23417
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>gb|AC116071.5| Rattus norvegicus 3 BAC CH230-230O7 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 224778

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 478    ctcaagaagaagacagagaag 498
              |||||||||||||||||||||
Sbjct: 178810 ctcaagaagaagacagagaag 178830
to top
>emb|BX294009.1|NC64C2 Neurospora crassa DNA linkage group V Cosmid contig 64C2
          Length = 81866

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 353   agatctgcgtcgacgacccgc 373
             |||||||||||||||||||||
Sbjct: 19308 agatctgcgtcgacgacccgc 19328
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>ref|XM_215812.3| PREDICTED: Rattus norvegicus transformation related protein 53
            binding protein 1 (predicted) (Trp53bp1_predicted), mRNA
          Length = 6045

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 478  ctcaagaagaagacagagaag 498
            |||||||||||||||||||||
Sbjct: 3200 ctcaagaagaagacagagaag 3220
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 273    cgccatcgccgagaagggccgcctg 297
              ||||||||||||||||||| |||||
Sbjct: 750686 cgccatcgccgagaagggcagcctg 750662
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>dbj|AK072981.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150E22, full
           insert sequence
          Length = 2390

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 429 ggaggcgttcgaggccgccgacgcc 453
           |||||||||||||| ||||||||||
Sbjct: 704 ggaggcgttcgaggacgccgacgcc 728
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>gb|AY110901.1| Zea mays CL7341_1 mRNA sequence
          Length = 746

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 308 ccggcgtcaaggccaaggagatgctcatctgggtcaacctc 348
           |||| |||||| |||||||| | ||||||||||||| ||||
Sbjct: 315 ccggggtcaagaccaaggagctcctcatctgggtcaccctc 355
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>gb|L24492.1|REREUTPBC Rhodococcus erythropolis ORF1, ethanolamine permease (eutP),
           ethanolamine ammonia-lyase large subunit (eutB),
           ethanolamine ammonia-lyase small subunit (eutC) genes,
           complete cds  and ORF2 gene, partial cds
          Length = 5173

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 283 gagaagggccgcctgaagaagatct 307
           ||||| |||||||||||||||||||
Sbjct: 586 gagaacggccgcctgaagaagatct 610
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>emb|BX842241.1|CNS0B0PM Oryza sativa chromosome 12, . Partial sequence from chromosome 12 of
             cultivar Nipponbare of ssp. japonica of Oryza sativa
             (rice), complete sequence
          Length = 45687

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 429   ggaggcgttcgaggccgccgacgcc 453
             |||||||||||||| ||||||||||
Sbjct: 20308 ggaggcgttcgaggacgccgacgcc 20332
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>emb|AL845332.11| Mouse DNA sequence from clone RP23-326D18 on chromosome 2, complete
             sequence
          Length = 200453

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 199   ctcaagcagaagaagcgggtg 219
             |||||||||||||||||||||
Sbjct: 68977 ctcaagcagaagaagcgggtg 68957
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>gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, complete sequence
          Length = 491611

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     gcgccaaggcggagatctac 72
              ||||||||||||||||||||
Sbjct: 282694 gcgccaaggcggagatctac 282675
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>ref|NM_188295.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 639

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 263 ccgaggtctgcgccatcgccgagaaggg 290
           |||||| | |||||||||||||||||||
Sbjct: 503 ccgaggaccgcgccatcgccgagaaggg 530
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>gb|BT016587.1| Zea mays clone Contig420 mRNA sequence
          Length = 999

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 263 ccgaggtctgcgccatcgccgagaaggg 290
           |||||| | |||||||||||||||||||
Sbjct: 562 ccgaggaccgcgccatcgccgagaaggg 589
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 75      cggcgacgcggcggggcagg 94
               ||||||||||||||||||||
Sbjct: 1229103 cggcgacgcggcggggcagg 1229122
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>gb|AC102505.8| Mus musculus chromosome 1, clone RP24-73K7, complete sequence
          Length = 209838

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 486    gaagacagagaaggagagca 505
              ||||||||||||||||||||
Sbjct: 126495 gaagacagagaaggagagca 126476
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>ref|XM_588936.2| PREDICTED: Bos taurus similar to Potassium voltage-gated channel
            subfamily A member 6 (Voltage-gated potassium channel
            subunit Kv1.6) (HBK2) (LOC539714), mRNA
          Length = 1869

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 450  cgccctgcccgtgcccgtca 469
            ||||||||||||||||||||
Sbjct: 1347 cgccctgcccgtgcccgtca 1366
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>ref|XM_656612.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4100.2), mRNA
          Length = 630

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 269 tctgcgccatcgccgagaag 288
           ||||||||||||||||||||
Sbjct: 477 tctgcgccatcgccgagaag 496
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>gb|AY049859.1| Urobatis jamaicensis 5.8S ribosomal RNA gene, and internal
           transcribed spacer 2, partial sequence
          Length = 527

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 413 cccgcagcttccccgtggag 432
           ||||||||||||||||||||
Sbjct: 164 cccgcagcttccccgtggag 183
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>emb|AJ698944.1| Equus caballus csf1R gene, smf gene, tigd14 gene, slc26a2 gene, ORF1 and
              cGMP-alpha gene
          Length = 142625

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 482    agaagaagacagagaaggag 501
              ||||||||||||||||||||
Sbjct: 105615 agaagaagacagagaaggag 105634
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>gb|AC115361.5| Mus musculus BAC clone RP24-76P12 from chromosome 8, complete sequence
          Length = 235095

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 483    gaagaagacagagaaggaga 502
              ||||||||||||||||||||
Sbjct: 224204 gaagaagacagagaaggaga 224223
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>gb|AC124367.4| Mus musculus BAC clone RP24-545D20 from chromosome 18, complete
             sequence
          Length = 169912

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 481   aagaagaagacagagaagga 500
             ||||||||||||||||||||
Sbjct: 81188 aagaagaagacagagaagga 81207
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>gb|AC124720.3| Mus musculus BAC clone RP23-387F14 from chromosome 5, complete sequence
          Length = 193210

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 480   caagaagaagacagagaagg 499
             ||||||||||||||||||||
Sbjct: 67827 caagaagaagacagagaagg 67846
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>gb|AC091001.3| Papio anubis clone RP41-36M16, complete sequence
          Length = 177066

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 380   gcaagctccactgcaaggcc 399
             ||||||||||||||||||||
Sbjct: 68478 gcaagctccactgcaaggcc 68497
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>gb|AC107781.9| Mus musculus, clone RP23-56O1, complete sequence
          Length = 174437

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 479    tcaagaagaagacagagaaggaga 502
              |||||||||| |||||||||||||
Sbjct: 123655 tcaagaagaaaacagagaaggaga 123678
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>emb|AL445664.14| Human DNA sequence from clone RP11-343J18 on chromosome 9 Contains part
             of a novel gene, the 3' end of a novel gene and a CpG
             island, complete sequence
          Length = 161002

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   gcggctgatgctggcggaga 121
             ||||||||||||||||||||
Sbjct: 44646 gcggctgatgctggcggaga 44627
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>gb|AC087442.13| Homo sapiens chromosome 11, clone RP11-495O11, complete sequence
          Length = 200269

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                         
Query: 313   gtcaaggccaaggagatgctcatctggg 340
             ||||||||||||||||||| ||||||||
Sbjct: 24195 gtcaaggccaaggagatgc-catctggg 24169
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 14      ggccggcgacgatgccgatg 33
               ||||||||||||||||||||
Sbjct: 3817667 ggccggcgacgatgccgatg 3817686
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>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29
          Length = 302007

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 447    cgacgccctgcccgtgcccg 466
              ||||||||||||||||||||
Sbjct: 126614 cgacgccctgcccgtgcccg 126633
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>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29
          Length = 295150

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 258    cgccaccgaggtctgcgcca 277
              ||||||||||||||||||||
Sbjct: 153363 cgccaccgaggtctgcgcca 153382



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 258    cgccaccgaggtctgcgcca 277
              ||||||||||||||||||||
Sbjct: 153348 cgccaccgaggtctgcgcca 153367
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>gb|AC106845.8| Homo sapiens chromosome 8, clone RP11-183J19, complete sequence
          Length = 166676

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 486   gaagacagagaaggagagca 505
             ||||||||||||||||||||
Sbjct: 56338 gaagacagagaaggagagca 56357
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>gb|AC103855.3| Homo sapiens chromosome 11, clone RP11-958J22, complete sequence
          Length = 183720

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                          
Query: 313    gtcaaggccaaggagatgctcatctggg 340
              ||||||||||||||||||| ||||||||
Sbjct: 171084 gtcaaggccaaggagatgc-catctggg 171058
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>emb|BX469902.7| Zebrafish DNA sequence from clone CH211-277G23 in linkage group 9,
             complete sequence
          Length = 179135

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 487   aagacagagaaggagagcac 506
             ||||||||||||||||||||
Sbjct: 84182 aagacagagaaggagagcac 84163
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 437     tcgaggccgccgacgccctg 456
               ||||||||||||||||||||
Sbjct: 3729456 tcgaggccgccgacgccctg 3729475



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 54      cgccaaggcggagatctacaccgg 77
               ||||||||||||||||| ||||||
Sbjct: 2387660 cgccaaggcggagatcttcaccgg 2387683
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>gb|AE005877.1| Caulobacter crescentus CB15 section 203 of 359 of the complete genome
          Length = 12778

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 438  cgaggccgccgacgccctgc 457
            ||||||||||||||||||||
Sbjct: 3251 cgaggccgccgacgccctgc 3232
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>gb|AE005694.1| Caulobacter crescentus CB15 section 20 of 359 of the complete
           genome
          Length = 14034

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 438 cgaggccgccgacgccctgc 457
           ||||||||||||||||||||
Sbjct: 252 cgaggccgccgacgccctgc 233
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>ref|NM_135440.1| Drosophila melanogaster CG4450-RA (CG4450), mRNA
          Length = 2158

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 450  cgccctgcccgtgcccgtca 469
            ||||||||||||||||||||
Sbjct: 1501 cgccctgcccgtgcccgtca 1520
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 15     gccggcgacgatgccgatgc 34
              ||||||||||||||||||||
Sbjct: 758832 gccggcgacgatgccgatgc 758813
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 225     ctacttcgccaaggccggcc 244
               ||||||||||||||||||||
Sbjct: 2825984 ctacttcgccaaggccggcc 2825965
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>gb|AC092492.1|AC092492 Drosophila melanogaster, chromosome 2L, region 30B-30E, BAC clone
              BACR20B09, complete sequence
          Length = 177997

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 450    cgccctgcccgtgcccgtca 469
              ||||||||||||||||||||
Sbjct: 159631 cgccctgcccgtgcccgtca 159612
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>gb|AC007299.18|AC007299 Drosophila melanogaster, chromosome 2L, region 30B-, BAC clone
            BACR07D23, complete sequence
          Length = 176610

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 450  cgccctgcccgtgcccgtca 469
            ||||||||||||||||||||
Sbjct: 2500 cgccctgcccgtgcccgtca 2481
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>gb|AC062032.5| Homo sapiens BAC clone RP11-515K12 from 2, complete sequence
          Length = 182147

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 327    gatgctcatctgggtcaacc 346
              ||||||||||||||||||||
Sbjct: 148751 gatgctcatctgggtcaacc 148770
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>dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1015E06
          Length = 164583

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 263    ccgaggtctgcgccatcgccgagaaggg 290
              |||||| | |||||||||||||||||||
Sbjct: 126352 ccgaggaccgcgccatcgccgagaaggg 126325
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 14      ggccggcgacgatgccgatg 33
               ||||||||||||||||||||
Sbjct: 4463457 ggccggcgacgatgccgatg 4463476



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 426     cgtggaggcgttcgaggccg 445
               ||||||||||||||||||||
Sbjct: 3261777 cgtggaggcgttcgaggccg 3261758
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>gb|AF056943.1|AF056943 Oryctolagus cuniculus potassium channel Kv1.5 mRNA, complete cds
          Length = 1872

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 450  cgccctgcccgtgcccgtca 469
            ||||||||||||||||||||
Sbjct: 1497 cgccctgcccgtgcccgtca 1516
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>ref|XM_317267.2| Anopheles gambiae str. PEST ENSANGP00000021912 (ENSANGG00000019423),
            partial mRNA
          Length = 1341

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 450  cgccctgcccgtgcccgtca 469
            ||||||||||||||||||||
Sbjct: 1044 cgccctgcccgtgcccgtca 1063
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>gb|AE003624.3| Drosophila melanogaster chromosome 2L, section 33 of 83 of the complete
              sequence
          Length = 270771

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 450    cgccctgcccgtgcccgtca 469
              ||||||||||||||||||||
Sbjct: 213406 cgccctgcccgtgcccgtca 213387
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>dbj|D45025.1|RABPCA Oryctolagus cuniculus mRNA for potassium channel, complete cds
          Length = 1866

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 450  cgccctgcccgtgcccgtca 469
            ||||||||||||||||||||
Sbjct: 1492 cgccctgcccgtgcccgtca 1511
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>gb|AC126445.5| Mus musculus BAC clone RP23-307P24 from 8, complete sequence
          Length = 167770

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 483    gaagaagacagagaaggaga 502
              ||||||||||||||||||||
Sbjct: 158121 gaagaagacagagaaggaga 158102
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>gb|AC158363.2| Mus musculus BAC clone RP23-214J3 from chromosome 15, complete sequence
          Length = 228138

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 483    gaagaagacagagaaggaga 502
              ||||||||||||||||||||
Sbjct: 113787 gaagaagacagagaaggaga 113768
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>emb|AL935175.6| Mouse DNA sequence from clone RP23-397E13 on chromosome 2, complete
              sequence
          Length = 158592

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 481    aagaagaagacagagaagga 500
              ||||||||||||||||||||
Sbjct: 108221 aagaagaagacagagaagga 108240


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,562,926
Number of Sequences: 3902068
Number of extensions: 3562926
Number of successful extensions: 82324
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 80099
Number of HSP's gapped (non-prelim): 2220
length of query: 512
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 489
effective length of database: 17,143,297,704
effective search space: 8383072577256
effective search space used: 8383072577256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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