ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bags31o13 |
|---|---|
| Clone Library Name | barley_pub |
>CHI3_CANAL (P40954) Chitinase 3 precursor (EC 3.2.1.14)| Length = 567 Score = 37.0 bits (84), Expect = 0.034 Identities = 29/82 (35%), Positives = 40/82 (48%) Frame = -1 Query: 401 VAGECSATSLFKSHTTSEDCSAISLFKSHTTSEDMSTEISPLASSTSTMFLSKECSEVFI 222 ++ S++ K+ TTS S+IS S TTS ST S +SSTS+ S S Sbjct: 335 ISSSSSSSKTSKTSTTSTTSSSISSTTSSTTS---STSSSSTSSSTSSTTSSSTTSSQIS 391 Query: 221 SISPATTDPKTSGRSHLSLSAS 156 + S A T + S +S SAS Sbjct: 392 TTSTAPTSSTSLSSSTISTSAS 413
>WSC3_YEAST (Q12215) Cell wall integrity and stress response component 3| precursor Length = 556 Score = 36.2 bits (82), Expect = 0.059 Identities = 25/78 (32%), Positives = 35/78 (44%) Frame = -1 Query: 404 IVAGECSATSLFKSHTTSEDCSAISLFKSHTTSEDMSTEISPLASSTSTMFLSKECSEVF 225 ++A S TS S T+S S S S TTS S+ S SST++ S S Sbjct: 181 MIATTVSTTSTTSSSTSSTTSSTTSSTTSSTTSSTTSSSTSSTTSSTTSSTTSSTTSSTT 240 Query: 224 ISISPATTDPKTSGRSHL 171 S + +TT TS + + Sbjct: 241 SSTTSSTTSSTTSSTTSI 258 Score = 35.8 bits (81), Expect = 0.076 Identities = 31/90 (34%), Positives = 40/90 (44%), Gaps = 1/90 (1%) Frame = -1 Query: 422 SSDLTVIVAGECSATSLFKSHTTSEDCSAI-SLFKSHTTSEDMSTEISPLASSTSTMFLS 246 SS++ S TS S TTS S+ S S TTS S+ S SST++ S Sbjct: 178 SSEMIATTVSTTSTTSSSTSSTTSSTTSSTTSSTTSSTTSSSTSSTTSSTTSSTTSSTTS 237 Query: 245 KECSEVFISISPATTDPKTSGRSHLSLSAS 156 S S + +TT TS S S S+S Sbjct: 238 STTSSTTSSTTSSTTSSTTSIFSVTSSSSS 267 Score = 30.0 bits (66), Expect = 4.2 Identities = 28/92 (30%), Positives = 42/92 (45%) Frame = -1 Query: 431 CFASSDLTVIVAGECSATSLFKSHTTSEDCSAISLFKSHTTSEDMSTEISPLASSTSTMF 252 C SS + V V E +S+ S +S++ S+ S S TTS S +IS TST Sbjct: 120 CGGSSYMNVYVNAETFVSSVESS--SSKEGSSTSYMPS-TTSSLSSAQISSTTRRTSTDM 176 Query: 251 LSKECSEVFISISPATTDPKTSGRSHLSLSAS 156 S E +S + T+ +S S + S + Sbjct: 177 KSSEMIATTVSTTSTTSSSTSSTTSSTTSSTT 208
>MID2_YEAST (P36027) Mating process protein MID2 (Serine-rich protein SMS1)| (Protein kinase A interference protein) Length = 376 Score = 34.7 bits (78), Expect = 0.17 Identities = 25/70 (35%), Positives = 34/70 (48%) Frame = -1 Query: 365 SHTTSEDCSAISLFKSHTTSEDMSTEISPLASSTSTMFLSKECSEVFISISPATTDPKTS 186 SHT+S A F S + S D ST S ASS S+ S S + +T+ +TS Sbjct: 82 SHTSSSTSIASISFTSFSFSSDSSTSSSSSASSDSSSSSSFSISSTSATSESSTSSTQTS 141 Query: 185 GRSHLSLSAS 156 S SLS++ Sbjct: 142 TSSSSSLSST 151
>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor| Length = 725 Score = 34.7 bits (78), Expect = 0.17 Identities = 24/79 (30%), Positives = 37/79 (46%) Frame = -1 Query: 386 SATSLFKSHTTSEDCSAISLFKSHTTSEDMSTEISPLASSTSTMFLSKECSEVFISISPA 207 S+++ S +TS S+ S S T++ ST S ++STS+ S S S S Sbjct: 214 SSSTSTSSSSTSTSPSSTSTSSSLTSTSSSSTSTSQSSTSTSSSSTSTSPSSTSTSSSST 273 Query: 206 TTDPKTSGRSHLSLSASXF 150 +T P + S S S S + Sbjct: 274 STSPSSKSTSASSTSTSSY 292 Score = 34.7 bits (78), Expect = 0.17 Identities = 39/139 (28%), Positives = 53/139 (38%), Gaps = 12/139 (8%) Frame = -1 Query: 524 SPSLILTAXXXXXXXXXXXXXXXXXXXXXXSCFASSDLTVIVAGECSATSLFKSHT---- 357 SPS T+ S ++S + + ++TS + T Sbjct: 192 SPSSTSTSPSSTSTSSSSTSTSSSSTSTSSSSTSTSPSSTSTSSSLTSTSSSSTSTSQSS 251 Query: 356 TSEDCSAISLFKSHTTSEDMSTEISPL-----ASSTSTMFLSKECSEVFISISP--ATTD 198 TS S+ S S T++ ST SP ASSTST S S S SP A+T Sbjct: 252 TSTSSSSTSTSPSSTSTSSSSTSTSPSSKSTSASSTSTSSYSTSTSPSLTSSSPTLASTS 311 Query: 197 PK-TSGRSHLSLSASXFGA 144 P TS S + S S G+ Sbjct: 312 PSSTSISSTFTDSTSSLGS 330 Score = 33.5 bits (75), Expect = 0.38 Identities = 24/70 (34%), Positives = 34/70 (48%) Frame = -1 Query: 365 SHTTSEDCSAISLFKSHTTSEDMSTEISPLASSTSTMFLSKECSEVFISISPATTDPKTS 186 S TTS + + SL S T++ ST SP ++STS+ S S S S +T P ++ Sbjct: 174 SSTTSSNPTTTSL--SSTSTSPSSTSTSPSSTSTSSSSTSTSSSSTSTSSSSTSTSPSST 231 Query: 185 GRSHLSLSAS 156 S S S Sbjct: 232 STSSSLTSTS 241 Score = 32.7 bits (73), Expect = 0.65 Identities = 28/88 (31%), Positives = 41/88 (46%) Frame = -1 Query: 419 SDLTVIVAGECSATSLFKSHTTSEDCSAISLFKSHTTSEDMSTEISPLASSTSTMFLSKE 240 S ++I + +S S+ T+ S+ S S T++ ST S +SSTST S Sbjct: 161 SSASIISPVTSTLSSTTSSNPTTTSLSSTSTSPSSTSTSPSSTSTS--SSSTSTSSSSTS 218 Query: 239 CSEVFISISPATTDPKTSGRSHLSLSAS 156 S S SP++T +S S S S S Sbjct: 219 TSSSSTSTSPSSTSTSSSLTSTSSSSTS 246 Score = 28.9 bits (63), Expect = 9.3 Identities = 21/82 (25%), Positives = 40/82 (48%) Frame = -1 Query: 422 SSDLTVIVAGECSATSLFKSHTTSEDCSAISLFKSHTTSEDMSTEISPLASSTSTMFLSK 243 SS ++ +A + + T+S ++IS + +TS + + E S L + S++FLS Sbjct: 605 SSTSEILQPTSSTAIATISASTSSLSATSIS---TPSTSVESTIESSSLTPTVSSIFLSS 661 Query: 242 ECSEVFISISPATTDPKTSGRS 177 + + S TT+ T+ S Sbjct: 662 SSAPSSLQTSVTTTEVSTTSIS 683
>BSC1_YEAST (Q12140) Bypass of stop codon protein 1| Length = 328 Score = 34.3 bits (77), Expect = 0.22 Identities = 32/123 (26%), Positives = 47/123 (38%) Frame = -1 Query: 524 SPSLILTAXXXXXXXXXXXXXXXXXXXXXXSCFASSDLTVIVAGECSATSLFKSHTTSED 345 S S I T+ + +S+ + + +++S S TTS Sbjct: 161 SSSSITTSSITTSSTTTSSTTTSSTTTSSSTTSSSTTSSSTTSSSTTSSSTTSSSTTSSS 220 Query: 344 CSAISLFKSHTTSEDMSTEISPLASSTSTMFLSKECSEVFISISPATTDPKTSGRSHLSL 165 ++ S S TTS +T S +SST T S S S S + D TS SH S Sbjct: 221 TTSSSTTSSSTTSSS-TTSSSTTSSSTKT---STTTSSTVKSSSTTSIDFTTSVDSHTSS 276 Query: 164 SAS 156 S + Sbjct: 277 SVA 279 Score = 30.4 bits (67), Expect = 3.2 Identities = 23/90 (25%), Positives = 42/90 (46%) Frame = -1 Query: 431 CFASSDLTVIVAGECSATSLFKSHTTSEDCSAISLFKSHTTSEDMSTEISPLASSTSTMF 252 C +S ++ + ++++ S TTS ++ S S TTS +T S +SST++ Sbjct: 157 CTKASSSSITTSSITTSSTTTSSTTTSSTTTSSSTTSSSTTSSS-TTSSSTTSSSTTSSS 215 Query: 251 LSKECSEVFISISPATTDPKTSGRSHLSLS 162 + + + S +TT T+ S S S Sbjct: 216 TTSSSTTSSSTTSSSTTSSSTTSSSTTSSS 245
>ARFG_ARATH (P93022) Auxin response factor 7 (Non-phototropic hypocotyl 4)| (Protein BIPOSTO) (Auxin-responsive protein IAA21/IAA23/IAA25) Length = 1164 Score = 33.5 bits (75), Expect = 0.38 Identities = 28/96 (29%), Positives = 39/96 (40%) Frame = -2 Query: 409 Q*LLQENAQQHRYSNHIQRVKTAQQYHCSNHIPRVKTCQQKYHPWPPQLQQCFFLKNAQK 230 Q LLQ+ QQ H Q ++ Q R + Q HP P QLQQ + Sbjct: 555 QQLLQQQQQQQLQQQHQQPLQQQTQQQQL----RTQPLQSHSHPQPQQLQQHKLQQLQVP 610 Query: 229 YSFLYHQPQQIPRHQEDHICHCQLHXLVLAGSGAMS 122 + LY+ Q +HQ L +++GS A S Sbjct: 611 QNQLYNGQQAAQQHQSQQASTHHLQPQLVSGSMASS 646
>YQ23_CAEEL (Q09452) Putative zinc finger protein C09F5.3| Length = 359 Score = 32.3 bits (72), Expect = 0.85 Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 4/93 (4%) Frame = -1 Query: 377 SLFKSHTTSEDCSAISLFKSHTTSE---DMSTEISPLASSTSTMFLS-KECSEVFISISP 210 +L K S CS+IS +SHT SE + IS S+ ST ++ ++C + F + Sbjct: 74 NLLKCELCSTVCSSISQLQSHTLSEHVPEKKPSISTSNSAPSTKRVACQQCEDTFEDFAQ 133 Query: 209 ATTDPKTSGRSHLSLSASXFGACWIRCNVNXPW 111 K SHLS S C I C V P+ Sbjct: 134 FAIHMK----SHLSSVTSQLFFCPI-CPVGTPF 161
>SDG41_ARATH (Q3ECY6) Protein SET DOMAIN GROUP 41| Length = 558 Score = 31.6 bits (70), Expect = 1.4 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = -1 Query: 302 DMSTEISPLASSTSTMFLSKECSEVFISISPATTDP 195 D+ +SPLASS FLS CS F + P+ P Sbjct: 14 DLFPPLSPLASSLYDSFLSSHCSSCFSLLPPSPPQP 49
>RECK_MOUSE (Q9Z0J1) Reversion-inducing cysteine-rich protein with Kazal motifs| precursor (mRECK) Length = 971 Score = 30.8 bits (68), Expect = 2.5 Identities = 13/38 (34%), Positives = 21/38 (55%) Frame = +3 Query: 39 NEVVDDCCDGSGRYASCRDV*CQXPWXVDIAPDPASTK 152 NE+ CC +G + +CR+ CQ + D +P P+ K Sbjct: 145 NEMGSVCCSYAGHHTNCREF-CQAIFRTDSSPGPSQIK 181
>RECK_HUMAN (O95980) Reversion-inducing cysteine-rich protein with Kazal motifs| precursor (hRECK) (Suppressor of tumorigenicity 15) (ST15) Length = 971 Score = 30.8 bits (68), Expect = 2.5 Identities = 13/38 (34%), Positives = 21/38 (55%) Frame = +3 Query: 39 NEVVDDCCDGSGRYASCRDV*CQXPWXVDIAPDPASTK 152 NE+ CC +G + +CR+ CQ + D +P P+ K Sbjct: 145 NEMGSVCCSYAGHHTNCREY-CQAIFRTDSSPGPSQIK 181
>FSH_DROME (P13709) Homeotic protein female sterile (Fragile-chorion membrane| protein) Length = 2038 Score = 30.4 bits (67), Expect = 3.2 Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 1/76 (1%) Frame = -2 Query: 400 LQENAQQHRYSNHIQRVKTAQQYH-CSNHIPRVKTCQQKYHPWPPQLQQCFFLKNAQKYS 224 LQ+ QQ + H+Q+ + QQ+H +N + + + P PP QQ L+ QK Sbjct: 1544 LQQQQQQQQQQQHLQQQQHQQQHHQAANKLLIIPKPIESMMPSPPDKQQ---LQQHQKVL 1600 Query: 223 FLYHQPQQIPRHQEDH 176 PQQ P + H Sbjct: 1601 ----PPQQSPSDMKLH 1612
>YTFL_ECOLI (P0AE45) UPF0053 inner membrane protein ytfL| Length = 447 Score = 30.4 bits (67), Expect = 3.2 Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 3/85 (3%) Frame = +1 Query: 187 DVLGSVVAGDIE--MNTSEHSLERNIVEVEEAKGDISVDMSSLVVC-DLNNDIAEQSSLV 357 D+ V AG + + EH L N+ E+E S+ V+ DL+ D EQS Sbjct: 179 DIYAVVEAGALAGVLRKQEHELIENVFELESRTVPSSMTPRENVIWFDLHED--EQS--- 233 Query: 358 VCDLNNDVAEHSPATITVKSEDAKH 432 L N VAEH + V +ED H Sbjct: 234 ---LKNKVAEHPHSKFLVCNEDIDH 255
>YTFL_ECOL6 (P0AE46) UPF0053 inner membrane protein ytfL| Length = 447 Score = 30.4 bits (67), Expect = 3.2 Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 3/85 (3%) Frame = +1 Query: 187 DVLGSVVAGDIE--MNTSEHSLERNIVEVEEAKGDISVDMSSLVVC-DLNNDIAEQSSLV 357 D+ V AG + + EH L N+ E+E S+ V+ DL+ D EQS Sbjct: 179 DIYAVVEAGALAGVLRKQEHELIENVFELESRTVPSSMTPRENVIWFDLHED--EQS--- 233 Query: 358 VCDLNNDVAEHSPATITVKSEDAKH 432 L N VAEH + V +ED H Sbjct: 234 ---LKNKVAEHPHSKFLVCNEDIDH 255
>YTFL_ECO57 (P0AE47) UPF0053 inner membrane protein ytfL| Length = 447 Score = 30.4 bits (67), Expect = 3.2 Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 3/85 (3%) Frame = +1 Query: 187 DVLGSVVAGDIE--MNTSEHSLERNIVEVEEAKGDISVDMSSLVVC-DLNNDIAEQSSLV 357 D+ V AG + + EH L N+ E+E S+ V+ DL+ D EQS Sbjct: 179 DIYAVVEAGALAGVLRKQEHELIENVFELESRTVPSSMTPRENVIWFDLHED--EQS--- 233 Query: 358 VCDLNNDVAEHSPATITVKSEDAKH 432 L N VAEH + V +ED H Sbjct: 234 ---LKNKVAEHPHSKFLVCNEDIDH 255
>CRH1_YEAST (P53301) Probable glycosidase CRH1 precursor (EC 3.2.-.-) (Congo| red hypersensitive protein 1) Length = 507 Score = 30.0 bits (66), Expect = 4.2 Identities = 23/80 (28%), Positives = 35/80 (43%) Frame = -1 Query: 425 ASSDLTVIVAGECSATSLFKSHTTSEDCSAISLFKSHTTSEDMSTEISPLASSTSTMFLS 246 A D V+ G ++S S T S S+ T S +S+ +S ASST + +S Sbjct: 289 AQEDFAVLANGGSISSSSTSSSTVSSSASS-------TVSSSVSSTVSSSASSTVSSSVS 341 Query: 245 KECSEVFISISPATTDPKTS 186 S S ++T P +S Sbjct: 342 STVSSSSSVSSSSSTSPSSS 361
>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c| precursor Length = 943 Score = 30.0 bits (66), Expect = 4.2 Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 4/94 (4%) Frame = -1 Query: 425 ASSDLTVIVAGECSATSLFKSHTTSEDCSAISLFKSHTTSEDMSTEISPLASSTSTMFLS 246 +++ T A TS+ + TTS + +S S ++ ST +PL+S ST S Sbjct: 294 SANSTTATSASSTPLTSVNSTTTTSASSTPLSSVSSANSTTATSTSSTPLSSVNSTTATS 353 Query: 245 KECSEV----FISISPATTDPKTSGRSHLSLSAS 156 + + + + A++ P TS S + SAS Sbjct: 354 ASSTPLTSVNSTTATSASSTPLTSVNSTSATSAS 387
>TCPD_ASHGO (Q75A36) T-complex protein 1 subunit delta (TCP-1-delta)| (CCT-delta) Length = 529 Score = 30.0 bits (66), Expect = 4.2 Identities = 18/59 (30%), Positives = 29/59 (49%) Frame = -1 Query: 380 TSLFKSHTTSEDCSAISLFKSHTTSEDMSTEISPLASSTSTMFLSKECSEVFISISPAT 204 T L H + E + IS+ +S TT+ + P+ STS + L+ EC + + I T Sbjct: 468 TELRSRHESGETNAGISVRRSGTTNTYDEHILQPVLVSTSAITLAAECVKSILRIDDIT 526
>OR8D4_HUMAN (Q8NGM9) Olfactory receptor 8D4| Length = 314 Score = 30.0 bits (66), Expect = 4.2 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%) Frame = -1 Query: 422 SSDLTVIVAGECSATSLFKSHTTSEDCSAISLFKSHTTS------EDMSTEISPLASSTS 261 ++ LT+I++ TS+ + H+ C A S SH T+ MS + P +SS+ Sbjct: 209 ATSLTIIISYAFILTSILRIHSKKGRCKAFSTCSSHLTAVLMFYGSLMSMYLKPASSSSL 268 Query: 260 TMFLSKECSEVF 225 T ++ S VF Sbjct: 269 T---QEKVSSVF 277
>NCAP_MEASE (P04851) Nucleoprotein (Protein N) (Nucleocapsid protein) (NP| protein) Length = 523 Score = 29.6 bits (65), Expect = 5.5 Identities = 18/56 (32%), Positives = 28/56 (50%) Frame = -1 Query: 398 AGECSATSLFKSHTTSEDCSAISLFKSHTTSEDMSTEISPLASSTSTMFLSKECSE 231 AG+ S+T + T+ED +S HTT + +S + P + S FL + SE Sbjct: 373 AGKVSSTLASELGITAEDARLVSEIAMHTTEDKISRAVGPRQAQVS--FLQGDQSE 426
>RPIA_CHLCV (Q822P7) Ribose-5-phosphate isomerase A (EC 5.3.1.6)| (Phosphoriboisomerase A) (PRI) Length = 233 Score = 29.6 bits (65), Expect = 5.5 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = -2 Query: 253 FFLKNAQKYSFLYHQPQQIPRHQEDHICHCQLHXLVLAG 137 FF+ N Y + H P P +ED + Q+H ++ AG Sbjct: 170 FFITNNGNYIYDIHTPNVYPHPEEDLLKLLQIHGIIEAG 208
>GBF_DICDI (P36417) G-box-binding factor (GBF)| Length = 708 Score = 29.6 bits (65), Expect = 5.5 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%) Frame = -2 Query: 397 QENAQQHRYSNHIQRVKTAQQYH-CSNHIPRVKTCQQKYHPWPPQLQQCFFLKNAQKYSF 221 Q+ QQH+ +H Q+ + QQ+H H + QQ H Q Q N Q++ Sbjct: 196 QQQQQQHQQQHHQQQQQQQQQHHQQQQHHQHSQPQQQHQHNQQQQHQH-----NQQQHQQ 250 Query: 220 LYHQPQQIPRHQE 182 +Q Q +P+ + Sbjct: 251 QQNQIQMVPQQPQ 263
>PRDM4_MOUSE (Q80V63) PR domain zinc finger protein 4 (PR domain-containing| protein 4) Length = 803 Score = 29.6 bits (65), Expect = 5.5 Identities = 21/75 (28%), Positives = 29/75 (38%) Frame = -2 Query: 274 PPQLQQCFFLKNAQKYSFLYHQPQQIPRHQEDHICHCQLHXLVLAGSGAMSTXHGXWH*T 95 PP+ + F+ YS Y Q +P H + H+C+C G S H T Sbjct: 522 PPESELLFY------YSRNYAQQIGVPEHPDVHLCNC--------GKECSSYSEFKAHLT 567 Query: 94 SRQDAYLPEPSQQSS 50 S +LP SS Sbjct: 568 SHIHNHLPSQGHSSS 582
>MTF1_HUMAN (Q14872) Metal-regulatory transcription factor 1 (Transcription| factor MTF-1) (MRE-binding transcription factor) Length = 753 Score = 29.6 bits (65), Expect = 5.5 Identities = 18/65 (27%), Positives = 30/65 (46%) Frame = +1 Query: 235 EHSLERNIVEVEEAKGDISVDMSSLVVCDLNNDIAEQSSLVVCDLNNDVAEHSPATITVK 414 EHS + NI+ E + +++ D L D N + SS V D + E P T+ + Sbjct: 3 EHSPDNNIIYFEAEEDELTPDDKMLRFVD-KNGLVPSSSGTVYDRTTVLIEQDPGTLEDE 61 Query: 415 SEDAK 429 +D + Sbjct: 62 DDDGQ 66
>WSC2_YEAST (P53832) Cell wall integrity and stress response component 2| precursor Length = 503 Score = 29.6 bits (65), Expect = 5.5 Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 6/86 (6%) Frame = -1 Query: 425 ASSDLTVIVAGECSATSLFKSHTTSEDCSAISLFKS-HTTSEDMSTEISPLASST----- 264 +SS+ T + S++S + TTS S S S TTS S S SST Sbjct: 176 SSSETTTSSSSSSSSSSTSTTSTTSTTSSTTSTSSSPSTTSSSTSASSSSETSSTQATSS 235 Query: 263 STMFLSKECSEVFISISPATTDPKTS 186 ST S S ++ +P++T TS Sbjct: 236 STTSTSSSTSTATVTSTPSSTSIGTS 261 Score = 28.9 bits (63), Expect = 9.3 Identities = 27/81 (33%), Positives = 35/81 (43%) Frame = -1 Query: 398 AGECSATSLFKSHTTSEDCSAISLFKSHTTSEDMSTEISPLASSTSTMFLSKECSEVFIS 219 A S++S S TTS S TT+ S+ S S+TST S S S Sbjct: 161 ATHSSSSSSTTSTTTS---------SSETTTSSSSSSSSSSTSTTST--TSTTSSTTSTS 209 Query: 218 ISPATTDPKTSGRSHLSLSAS 156 SP+TT TS S S++ Sbjct: 210 SSPSTTSSSTSASSSSETSST 230
>SRY_MUSSI (Q62565) Sex-determining region Y protein (Testis-determining| factor) Length = 311 Score = 29.3 bits (64), Expect = 7.2 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 5/75 (6%) Frame = -2 Query: 385 QQHRYSNHIQRVKTAQQYHCSNHIPRVK-----TCQQKYHPWPPQLQQCFFLKNAQKYSF 221 QQ ++ +H Q+ QQ H +H + + QQ++H P Q QQ F + Q+ F Sbjct: 201 QQQQFHDHQQQ---QQQLHNHHHQQQQQFHDYPQQQQQFHDHPQQKQQ-FHDRPQQQQQF 256 Query: 220 LYHQPQQIPRHQEDH 176 H QQ H H Sbjct: 257 HDHHQQQQQFHDHHH 271
>ABDB_DROME (P09087) Homeobox protein abdominal-B (P3) (Infraabdominal 7)| (IAB-7) (PH189) Length = 493 Score = 29.3 bits (64), Expect = 7.2 Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 3/75 (4%) Frame = -2 Query: 397 QENAQQHRYSNHIQRVKTAQQ---YHCSNHIPRVKTCQQKYHPWPPQLQQCFFLKNAQKY 227 Q+ QQ + H+Q + Q +H +H+P+ +H P LQQ + Q++ Sbjct: 9 QQQQQQQQEQQHLQEQQQHLQQLHHHAHHHLPQPLHTTSHHHSAHPHLQQ---QQQQQQH 65 Query: 226 SFLYHQPQQIPRHQE 182 + + P + + Q+ Sbjct: 66 AVVASSPSSVLQQQQ 80
>NCAP_MEASM (Q77M43) Nucleoprotein (Protein N) (Nucleocapsid protein) (NP| protein) Length = 525 Score = 29.3 bits (64), Expect = 7.2 Identities = 18/56 (32%), Positives = 28/56 (50%) Frame = -1 Query: 398 AGECSATSLFKSHTTSEDCSAISLFKSHTTSEDMSTEISPLASSTSTMFLSKECSE 231 AG+ S+T + T+ED +S HTT + +S + P + S FL + SE Sbjct: 373 AGKVSSTLASELGITAEDARLVSEIAMHTTEDKISRAVGPRQAQVS--FLHGDQSE 426
>NCAP_MEASH (P10050) Nucleoprotein (Protein N) (Nucleocapsid protein) (NP| protein) Length = 525 Score = 29.3 bits (64), Expect = 7.2 Identities = 18/56 (32%), Positives = 28/56 (50%) Frame = -1 Query: 398 AGECSATSLFKSHTTSEDCSAISLFKSHTTSEDMSTEISPLASSTSTMFLSKECSE 231 AG+ S+T + T+ED +S HTT + +S + P + S FL + SE Sbjct: 373 AGKVSSTLASELGITAEDARLVSEIAMHTTEDKISRAVGPRQAQVS--FLHGDQSE 426
>NCAP_MEASF (Q89933) Nucleoprotein (Protein N) (Nucleocapsid protein) (NP| protein) Length = 525 Score = 29.3 bits (64), Expect = 7.2 Identities = 18/56 (32%), Positives = 28/56 (50%) Frame = -1 Query: 398 AGECSATSLFKSHTTSEDCSAISLFKSHTTSEDMSTEISPLASSTSTMFLSKECSE 231 AG+ S+T + T+ED +S HTT + +S + P + S FL + SE Sbjct: 373 AGKVSSTLASELGITAEDARLVSEIAMHTTEDKISRAVGPRQAQVS--FLHGDQSE 426
>NCAP_MEASA (P35972) Nucleoprotein (Protein N) (Nucleocapsid protein) (NP| protein) Length = 525 Score = 29.3 bits (64), Expect = 7.2 Identities = 18/56 (32%), Positives = 28/56 (50%) Frame = -1 Query: 398 AGECSATSLFKSHTTSEDCSAISLFKSHTTSEDMSTEISPLASSTSTMFLSKECSE 231 AG+ S+T + T+ED +S HTT + +S + P + S FL + SE Sbjct: 373 AGKVSSTLASELGITAEDARLVSEIAMHTTEDKISRAVGPRQAQVS--FLHGDQSE 426
>HDC_DROME (Q9N2M8) Headcase protein [Contains: Headcase short protein]| Length = 1080 Score = 29.3 bits (64), Expect = 7.2 Identities = 24/95 (25%), Positives = 34/95 (35%), Gaps = 2/95 (2%) Frame = -2 Query: 397 QENAQQHRYSNHIQRVKTAQQYHCSNHIPRVKTCQQKYHPWPPQ--LQQCFFLKNAQKYS 224 Q+ QQ + Q+ + QQ H P V T Q+ P + KY Sbjct: 742 QQQQQQQQQQTQQQQSQQQQQQQQQQHQPVVSTFQRGNFPQQSHKTMNMMAMADVMSKYQ 801 Query: 223 FLYHQPQQIPRHQEDHICHCQLHXLVLAGSGAMST 119 HQ QQ R Q+ ++ Q H G + T Sbjct: 802 QQQHQQQQQQRQQQHNLQPQQQHATQKGLEGLLLT 836
>GCSH1_THETN (Q8RDF0) Glycine cleavage system H protein 1| Length = 125 Score = 29.3 bits (64), Expect = 7.2 Identities = 21/83 (25%), Positives = 37/83 (44%) Frame = +1 Query: 118 KLTLHLIQQAPKXEADNDRCDLPDVLGSVVAGDIEMNTSEHSLERNIVEVEEAKGDISVD 297 K + + A D + +LP+V AGD+ ++E +A D+ + Sbjct: 22 KAYIGITDYAQDSLGDAEYIELPEVGTEFTAGDV----------LGVIESAKAASDVYIP 71 Query: 298 MSSLVVCDLNNDIAEQSSLVVCD 366 + V+ ++NN +AE SLV D Sbjct: 72 VDGEVI-EVNNAVAEDPSLVNSD 93
>TCPD_KLULA (Q6CL82) T-complex protein 1 subunit delta (TCP-1-delta)| (CCT-delta) Length = 530 Score = 29.3 bits (64), Expect = 7.2 Identities = 18/59 (30%), Positives = 28/59 (47%) Frame = -1 Query: 380 TSLFKSHTTSEDCSAISLFKSHTTSEDMSTEISPLASSTSTMFLSKECSEVFISISPAT 204 T L H E S IS+ +S T++ + P+ STS + L+ EC + + I T Sbjct: 469 TELRLRHENGESNSGISVRRSGTSNTYEDHILQPVLVSTSAIRLASECVKSILRIDDIT 527
>WDR24_CHICK (Q5ZMV9) WD-repeat protein 24| Length = 705 Score = 29.3 bits (64), Expect = 7.2 Identities = 10/36 (27%), Positives = 23/36 (63%) Frame = -2 Query: 400 LQENAQQHRYSNHIQRVKTAQQYHCSNHIPRVKTCQ 293 + E Q+H Y+++I ++ Q ++ SN + ++ TC+ Sbjct: 583 IDEQTQEHWYTSYIDLLQRFQLWNISNEVIKLSTCR 618
>CF2_DROME (P20385) Chorion transcription factor Cf2, isoforms I/II| Length = 510 Score = 28.9 bits (63), Expect = 9.3 Identities = 18/55 (32%), Positives = 27/55 (49%) Frame = -2 Query: 229 YSFLYHQPQQIPRHQEDHICHCQLHXLVLAGSGAMSTXHGXWH*TSRQDAYLPEP 65 Y + HQ + P+H DH+ C H + L GA++T G H ++Q L P Sbjct: 75 YCPMCHQQFERPQHVADHMQLC--HGITLNAQGAIATLDGG-HPQAQQHPKLSHP 126
>PRDM4_RAT (Q9QZP2) PR domain zinc finger protein 4 (PR domain-containing| protein 4) Length = 798 Score = 28.9 bits (63), Expect = 9.3 Identities = 21/75 (28%), Positives = 29/75 (38%) Frame = -2 Query: 274 PPQLQQCFFLKNAQKYSFLYHQPQQIPRHQEDHICHCQLHXLVLAGSGAMSTXHGXWH*T 95 PP+ + F+ YS Y Q +P H + H+C+C G S H T Sbjct: 515 PPENELLFY------YSRDYAQQIGVPEHPDVHLCNC--------GKECSSYSEFKAHLT 560 Query: 94 SRQDAYLPEPSQQSS 50 S +LP SS Sbjct: 561 SHIHNHLPSQGHSSS 575
>NCAP_MEASY (P26030) Nucleoprotein (Protein N) (Nucleocapsid protein) (NP| protein) Length = 525 Score = 28.9 bits (63), Expect = 9.3 Identities = 18/56 (32%), Positives = 28/56 (50%) Frame = -1 Query: 398 AGECSATSLFKSHTTSEDCSAISLFKSHTTSEDMSTEISPLASSTSTMFLSKECSE 231 AG+ S+T + T+ED +S HTT + +S + P + S FL + SE Sbjct: 373 AGKVSSTLASELGITAEDARLVSEIAMHTTEDRISRAVGPRQAQVS--FLHGDQSE 426
>NCAP_MEASI (P26029) Nucleoprotein (Protein N) (Nucleocapsid protein) (NP| protein) Length = 525 Score = 28.9 bits (63), Expect = 9.3 Identities = 18/56 (32%), Positives = 28/56 (50%) Frame = -1 Query: 398 AGECSATSLFKSHTTSEDCSAISLFKSHTTSEDMSTEISPLASSTSTMFLSKECSE 231 AG+ S+T + T+ED +S HTT + +S + P + S FL + SE Sbjct: 373 AGKVSSTLASELGITAEDARLVSEIAMHTTEDRISRAVGPRQAQVS--FLHGDQSE 426
>CF23_DROME (Q01522) Chorion transcription factor Cf2, isoform III| Length = 514 Score = 28.9 bits (63), Expect = 9.3 Identities = 18/55 (32%), Positives = 27/55 (49%) Frame = -2 Query: 229 YSFLYHQPQQIPRHQEDHICHCQLHXLVLAGSGAMSTXHGXWH*TSRQDAYLPEP 65 Y + HQ + P+H DH+ C H + L GA++T G H ++Q L P Sbjct: 75 YCPMCHQQFERPQHVADHMQLC--HGITLNAQGAIATLDGG-HPQAQQHPKLSHP 126 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,656,273 Number of Sequences: 219361 Number of extensions: 1177733 Number of successful extensions: 3632 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 3330 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3588 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4142954952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
