ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags32d02 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1199 bits (605), Expect = 0.0 Identities = 653/667 (97%), Gaps = 3/667 (0%) Strand = Plus / Minus Query: 2 ggaagataaaaaat--agggattgtat-aagaactatatacaaaagaataggaaaaaggg 58 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 79731 ggaagataaaaaaataagggattgtatcaagaactatatacaaaagaataggaaaaaggg 79672 Query: 59 ctcgaatagaaaaatagaatnagactcaagttccgaagtaattacacataatagaaaaat 118 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 79671 ctcgaatagaaaaatagaatcagactcaagttccgaagtaattacacataatagaaaaat 79612 Query: 119 ggactcaggttcaagttccgaagtaattacacatatagaaattcaaaaagaaatcgatac 178 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 79611 ggactcaggttcaagttccgaagtaattacacatatagaaatccaaaaagaaatcgatac 79552 Query: 179 gatccacgtcataatccatattggattcccaaatttattaaagaaaaaaggagcaatcga 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79551 gatccacgtcataatccatattggattcccaaatttattaaagaaaaaaggagcaatcga 79492 Query: 239 agaattagagaaagatctacaaaaggaaattaactctgtaaaccagagatttaatatttc 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79491 agaattagagaaagatctacaaaaggaaattaactctgtaaaccagagatttaatatttc 79432 Query: 299 tatcgaaaaagttaaagaaccttatagacagcctaacattcttgcagaatatatagcttt 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79431 tatcgaaaaagttaaagaaccttatagacagcctaacattcttgcagaatatatagcttt 79372 Query: 359 ccaattaaaaaatagagtttcattccgaaaggcaatgaaaaaagccattgaattaactaa 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79371 ccaattaaaaaatagagtttcattccgaaaggcaatgaaaaaagccattgaattaactaa 79312 Query: 419 aaaagcagatataaggggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaat 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79311 aaaagcagatataaggggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaat 79252 Query: 479 tgcacgtgccgaatccattaaaaggggcagacttcccctccaaacaatccgcgctaaaat 538 |||||| |||||||||||||||| ||| |||||||||||||||||||| ||||||||||| Sbjct: 79251 tgcacgcgccgaatccattaaaaagggtagacttcccctccaaacaattcgcgctaaaat 79192 Query: 539 tgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaaatttggat 598 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 79191 tgattattgctgctatccaattcggactatctatggagtattaggtgtaaaaatttggat 79132 Query: 599 attcgtagacgaagaataactaatcttgtcttcgaattctgtccattgatagaataaaaa 658 ||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||| Sbjct: 79131 attcgtagacgaagaataagtaatcttgtcttcggattctgtccattgatagaatcaaaa 79072 Query: 659 atgacaa 665 ||||||| Sbjct: 79071 atgacaa 79065
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 959 bits (484), Expect = 0.0 Identities = 600/639 (93%) Strand = Plus / Minus Query: 27 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaatnagactca 86 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 79890 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaagcagactca 79831 Query: 87 agttccgaagtaattacacataatagaaaaatggactcaggttcaagttccgaagtaatt 146 |||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 79830 agtttcgaagtaattacacataataaaaaaatggactcaggctcaagttccgaagtaatt 79771 Query: 147 acacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattggattc 206 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 79770 acacatatagaaattcaaaaagaaatcgatacaatccacgtcataatccatattggattc 79711 Query: 207 ccaaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaggaa 266 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 79710 cccaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaagaa 79651 Query: 267 attaactctgtaaaccagagatttaatatttctatcgaaaaagttaaagaaccttataga 326 |||| ||||||||||||||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 79650 gttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttataga 79591 Query: 327 cagcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 386 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79590 caacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 79531 Query: 387 aaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagta 446 |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 79530 aaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagta 79471 Query: 447 aaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggc 506 |||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || Sbjct: 79470 aaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggt 79411 Query: 507 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 566 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 79410 agacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaact 79351 Query: 567 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 626 ||||||||||||||||| || ||||||||||||||||||||||||||||||| || | || Sbjct: 79350 atctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctg 79291 Query: 627 tcttcgaattctgtccattgatagaataaaaaatgacaa 665 ||||| ||||||| || | ||||||||||||||||||| Sbjct: 79290 tcttcccattctgttcagtaatagaataaaaaatgacaa 79252
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 959 bits (484), Expect = 0.0 Identities = 600/639 (93%) Strand = Plus / Plus Query: 27 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaatnagactca 86 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 70807 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaagcagactca 70866 Query: 87 agttccgaagtaattacacataatagaaaaatggactcaggttcaagttccgaagtaatt 146 |||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 70867 agtttcgaagtaattacacataataaaaaaatggactcaggctcaagttccgaagtaatt 70926 Query: 147 acacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattggattc 206 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 70927 acacatatagaaattcaaaaagaaatcgatacaatccacgtcataatccatattggattc 70986 Query: 207 ccaaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaggaa 266 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 70987 cccaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaagaa 71046 Query: 267 attaactctgtaaaccagagatttaatatttctatcgaaaaagttaaagaaccttataga 326 |||| ||||||||||||||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 71047 gttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttataga 71106 Query: 327 cagcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 386 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71107 caacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 71166 Query: 387 aaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagta 446 |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 71167 aaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagta 71226 Query: 447 aaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggc 506 |||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || Sbjct: 71227 aaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggt 71286 Query: 507 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 566 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 71287 agacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaact 71346 Query: 567 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 626 ||||||||||||||||| || ||||||||||||||||||||||||||||||| || | || Sbjct: 71347 atctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctg 71406 Query: 627 tcttcgaattctgtccattgatagaataaaaaatgacaa 665 ||||| ||||||| || | ||||||||||||||||||| Sbjct: 71407 tcttcccattctgttcagtaatagaataaaaaatgacaa 71445
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 959 bits (484), Expect = 0.0 Identities = 600/639 (93%) Strand = Plus / Plus Query: 27 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaatnagactca 86 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 9189734 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaagcagactca 9189793 Query: 87 agttccgaagtaattacacataatagaaaaatggactcaggttcaagttccgaagtaatt 146 |||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 9189794 agtttcgaagtaattacacataataaaaaaatggactcaggctcaagttccgaagtaatt 9189853 Query: 147 acacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattggattc 206 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 9189854 acacatatagaaattcaaaaagaaatcgatacaatccacgtcataatccatattggattc 9189913 Query: 207 ccaaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaggaa 266 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 9189914 cccaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaagaa 9189973 Query: 267 attaactctgtaaaccagagatttaatatttctatcgaaaaagttaaagaaccttataga 326 |||| ||||||||||||||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 9189974 gttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttataga 9190033 Query: 327 cagcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 386 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9190034 caacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 9190093 Query: 387 aaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagta 446 |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 9190094 aaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagta 9190153 Query: 447 aaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggc 506 |||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || Sbjct: 9190154 aaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggt 9190213 Query: 507 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 566 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 9190214 agacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaact 9190273 Query: 567 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 626 ||||||||||||||||| || ||||||||||||||||||||||||||||||| || | || Sbjct: 9190274 atctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctg 9190333 Query: 627 tcttcgaattctgtccattgatagaataaaaaatgacaa 665 ||||| ||||||| || | ||||||||||||||||||| Sbjct: 9190334 tcttcccattctgttcagtaatagaataaaaaatgacaa 9190372 Score = 959 bits (484), Expect = 0.0 Identities = 600/639 (93%) Strand = Plus / Plus Query: 27 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaatnagactca 86 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 9112781 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaagcagactca 9112840 Query: 87 agttccgaagtaattacacataatagaaaaatggactcaggttcaagttccgaagtaatt 146 |||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 9112841 agtttcgaagtaattacacataataaaaaaatggactcaggctcaagttccgaagtaatt 9112900 Query: 147 acacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattggattc 206 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 9112901 acacatatagaaattcaaaaagaaatcgatacaatccacgtcataatccatattggattc 9112960 Query: 207 ccaaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaggaa 266 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 9112961 cccaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaagaa 9113020 Query: 267 attaactctgtaaaccagagatttaatatttctatcgaaaaagttaaagaaccttataga 326 |||| ||||||||||||||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 9113021 gttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttataga 9113080 Query: 327 cagcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 386 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9113081 caacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 9113140 Query: 387 aaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagta 446 |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 9113141 aaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagta 9113200 Query: 447 aaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggc 506 |||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || Sbjct: 9113201 aaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggt 9113260 Query: 507 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 566 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 9113261 agacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaact 9113320 Query: 567 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 626 ||||||||||||||||| || ||||||||||||||||||||||||||||||| || | || Sbjct: 9113321 atctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctg 9113380 Query: 627 tcttcgaattctgtccattgatagaataaaaaatgacaa 665 ||||| ||||||| || | ||||||||||||||||||| Sbjct: 9113381 tcttcccattctgttcagtaatagaataaaaaatgacaa 9113419
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 959 bits (484), Expect = 0.0 Identities = 600/639 (93%) Strand = Plus / Minus Query: 27 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaatnagactca 86 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 79887 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaagcagactca 79828 Query: 87 agttccgaagtaattacacataatagaaaaatggactcaggttcaagttccgaagtaatt 146 |||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 79827 agtttcgaagtaattacacataataaaaaaatggactcaggctcaagttccgaagtaatt 79768 Query: 147 acacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattggattc 206 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 79767 acacatatagaaattcaaaaagaaatcgatacaatccacgtcataatccatattggattc 79708 Query: 207 ccaaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaggaa 266 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 79707 cccaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaagaa 79648 Query: 267 attaactctgtaaaccagagatttaatatttctatcgaaaaagttaaagaaccttataga 326 |||| ||||||||||||||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 79647 gttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttataga 79588 Query: 327 cagcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 386 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79587 caacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 79528 Query: 387 aaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagta 446 |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 79527 aaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagta 79468 Query: 447 aaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggc 506 |||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || Sbjct: 79467 aaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggt 79408 Query: 507 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 566 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 79407 agacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaact 79348 Query: 567 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 626 ||||||||||||||||| || ||||||||||||||||||||||||||||||| || | || Sbjct: 79347 atctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctg 79288 Query: 627 tcttcgaattctgtccattgatagaataaaaaatgacaa 665 ||||| ||||||| || | ||||||||||||||||||| Sbjct: 79287 tcttcccattctgttcagtaatagaataaaaaatgacaa 79249
>ref|XM_481016.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2472 Score = 952 bits (480), Expect = 0.0 Identities = 599/639 (93%) Strand = Plus / Plus Query: 27 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaatnagactca 86 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 969 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaagcagactca 1028 Query: 87 agttccgaagtaattacacataatagaaaaatggactcaggttcaagttccgaagtaatt 146 |||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 1029 agtttcgaagtaattacacataataaaaaaatggactcaggctcaagttccgaagtaatt 1088 Query: 147 acacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattggattc 206 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1089 acacatatagaaattcaaaaagaaatcgatacaatccacgtcataatccatattggattc 1148 Query: 207 ccaaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaggaa 266 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1149 cccaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaagaa 1208 Query: 267 attaactctgtaaaccagagatttaatatttctatcgaaaaagttaaagaaccttataga 326 |||| ||||||||||||||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 1209 gttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttataga 1268 Query: 327 cagcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 386 || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1269 caacctaacattcttgtagaatatatagctttccaattaaaaaatagagtttcattccga 1328 Query: 387 aaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagta 446 |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 1329 aaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagta 1388 Query: 447 aaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggc 506 |||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || Sbjct: 1389 aaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggt 1448 Query: 507 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 566 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1449 agacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaact 1508 Query: 567 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 626 ||||||||||||||||| || ||||||||||||||||||||||||||||||| || | || Sbjct: 1509 atctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctg 1568 Query: 627 tcttcgaattctgtccattgatagaataaaaaatgacaa 665 ||||| ||||||| || | ||||||||||||||||||| Sbjct: 1569 tcttcccattctgttcagtaatagaataaaaaatgacaa 1607
>ref|XM_481017.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2472 Score = 952 bits (480), Expect = 0.0 Identities = 599/639 (93%) Strand = Plus / Plus Query: 27 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaatnagactca 86 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 969 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaagcagactca 1028 Query: 87 agttccgaagtaattacacataatagaaaaatggactcaggttcaagttccgaagtaatt 146 |||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 1029 agtttcgaagtaattacacataataaaaaaatggactcaggctcaagttccgaagtaatt 1088 Query: 147 acacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattggattc 206 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1089 acacatatagaaattcaaaaagaaatcgatacaatccacgtcataatccatattggattc 1148 Query: 207 ccaaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaggaa 266 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1149 cccaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaagaa 1208 Query: 267 attaactctgtaaaccagagatttaatatttctatcgaaaaagttaaagaaccttataga 326 |||| ||||||||||||||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 1209 gttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttataga 1268 Query: 327 cagcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 386 || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1269 caacctaacattcttgtagaatatatagctttccaattaaaaaatagagtttcattccga 1328 Query: 387 aaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagta 446 |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 1329 aaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagta 1388 Query: 447 aaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggc 506 |||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || Sbjct: 1389 aaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggt 1448 Query: 507 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 566 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1449 agacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaact 1508 Query: 567 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 626 ||||||||||||||||| || ||||||||||||||||||||||||||||||| || | || Sbjct: 1509 atctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctg 1568 Query: 627 tcttcgaattctgtccattgatagaataaaaaatgacaa 665 ||||| ||||||| || | ||||||||||||||||||| Sbjct: 1569 tcttcccattctgttcagtaatagaataaaaaatgacaa 1607
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 952 bits (480), Expect = 0.0 Identities = 599/639 (93%) Strand = Plus / Minus Query: 27 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaatnagactca 86 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 79947 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaagcagactca 79888 Query: 87 agttccgaagtaattacacataatagaaaaatggactcaggttcaagttccgaagtaatt 146 |||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 79887 agtttcgaagtaattacacataataaaaaaatggactcaggctcaagttccgaagtaatt 79828 Query: 147 acacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattggattc 206 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 79827 acacatatagaaattcaaaaagaaatcgatacaatccacgtcataatccatattggattc 79768 Query: 207 ccaaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaggaa 266 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 79767 cccaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaagaa 79708 Query: 267 attaactctgtaaaccagagatttaatatttctatcgaaaaagttaaagaaccttataga 326 |||| ||||||||||||||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 79707 gttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttataga 79648 Query: 327 cagcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 386 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79647 caacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 79588 Query: 387 aaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagta 446 |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 79587 aaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagta 79528 Query: 447 aaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggc 506 |||||||| || ||||||| |||||||||||||| |||||||| | ||| |||| || Sbjct: 79527 aaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgagtgcatcaaaaaaggt 79468 Query: 507 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 566 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 79467 agacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaact 79408 Query: 567 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 626 ||||||||||||||||| || ||||||||||||||||||||||||||||||| || | || Sbjct: 79407 atctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctg 79348 Query: 627 tcttcgaattctgtccattgatagaataaaaaatgacaa 665 ||||| ||||||| || | ||||||||||||||||||| Sbjct: 79347 tcttcccattctgttcagtaatagaataaaaaatgacaa 79309
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 952 bits (480), Expect = 0.0 Identities = 599/639 (93%) Strand = Plus / Minus Query: 27 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaatnagactca 86 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 79947 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaagcagactca 79888 Query: 87 agttccgaagtaattacacataatagaaaaatggactcaggttcaagttccgaagtaatt 146 |||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 79887 agtttcgaagtaattacacataataaaaaaatggactcaggctcaagttccgaagtaatt 79828 Query: 147 acacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattggattc 206 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 79827 acacatatagaaattcaaaaagaaatcgatacaatccacgtcataatccatattggattc 79768 Query: 207 ccaaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaggaa 266 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 79767 cccaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaagaa 79708 Query: 267 attaactctgtaaaccagagatttaatatttctatcgaaaaagttaaagaaccttataga 326 |||| ||||||||||||||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 79707 gttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttataga 79648 Query: 327 cagcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 386 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79647 caacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 79588 Query: 387 aaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagta 446 |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 79587 aaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagta 79528 Query: 447 aaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggc 506 |||||||| || ||||||| |||||||||||||| |||||||| | ||| |||| || Sbjct: 79527 aaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgagtgcatcaaaaaaggt 79468 Query: 507 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 566 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 79467 agacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaact 79408 Query: 567 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 626 ||||||||||||||||| || ||||||||||||||||||||||||||||||| || | || Sbjct: 79407 atctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctg 79348 Query: 627 tcttcgaattctgtccattgatagaataaaaaatgacaa 665 ||||| ||||||| || | ||||||||||||||||||| Sbjct: 79347 tcttcccattctgttcagtaatagaataaaaaatgacaa 79309
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 952 bits (480), Expect = 0.0 Identities = 599/639 (93%) Strand = Plus / Minus Query: 27 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaatnagactca 86 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 79934 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaagcagactca 79875 Query: 87 agttccgaagtaattacacataatagaaaaatggactcaggttcaagttccgaagtaatt 146 |||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 79874 agtttcgaagtaattacacataataaaaaaatggactcaggctcaagttccgaagtaatt 79815 Query: 147 acacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattggattc 206 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 79814 acacatatagaaattcaaaaagaaatcgatacaatccacgtcataatccatattggattc 79755 Query: 207 ccaaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaggaa 266 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 79754 cccaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaagaa 79695 Query: 267 attaactctgtaaaccagagatttaatatttctatcgaaaaagttaaagaaccttataga 326 |||| ||||||||||||||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 79694 gttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttataga 79635 Query: 327 cagcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 386 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79634 caacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 79575 Query: 387 aaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagta 446 |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 79574 aaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagta 79515 Query: 447 aaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggc 506 |||||||| || ||||||| |||||||||||||| |||||||| | ||| |||| || Sbjct: 79514 aaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgagtgcatcaaaaaaggt 79455 Query: 507 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 566 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 79454 agacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaact 79395 Query: 567 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 626 ||||||||||||||||| || ||||||||||||||||||||||||||||||| || | || Sbjct: 79394 atctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctg 79335 Query: 627 tcttcgaattctgtccattgatagaataaaaaatgacaa 665 ||||| ||||||| || | ||||||||||||||||||| Sbjct: 79334 tcttcccattctgttcagtaatagaataaaaaatgacaa 79296
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 952 bits (480), Expect = 0.0 Identities = 599/639 (93%) Strand = Plus / Minus Query: 27 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaatnagactca 86 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 78127 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaagcagactca 78068 Query: 87 agttccgaagtaattacacataatagaaaaatggactcaggttcaagttccgaagtaatt 146 |||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 78067 agtttcgaagtaattacacataataaaaaaatggactcaggctcaagttccgaagtaatt 78008 Query: 147 acacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattggattc 206 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 78007 acacatatagaaattcaaaaagaaatcgatacaatccacgtcataatccatattggattc 77948 Query: 207 ccaaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaggaa 266 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 77947 cccaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaagaa 77888 Query: 267 attaactctgtaaaccagagatttaatatttctatcgaaaaagttaaagaaccttataga 326 |||| ||||||||||||||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 77887 gttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttataga 77828 Query: 327 cagcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 386 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77827 caacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 77768 Query: 387 aaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagta 446 |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 77767 aaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagta 77708 Query: 447 aaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggc 506 |||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || Sbjct: 77707 aaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggt 77648 Query: 507 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 566 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 77647 agacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaact 77588 Query: 567 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 626 ||||||||||||||||| || ||||||||||||||||||||| ||||||||| || | || Sbjct: 77587 atctatggagtattaggagttaaaatttggatattcgtagacaaagaataaccaaccctg 77528 Query: 627 tcttcgaattctgtccattgatagaataaaaaatgacaa 665 ||||| ||||||| || | ||||||||||||||||||| Sbjct: 77527 tcttcccattctgttcagtaatagaataaaaaatgacaa 77489
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 952 bits (480), Expect = 0.0 Identities = 599/639 (93%) Strand = Plus / Minus Query: 27 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaatnagactca 86 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 12191 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaagcagactca 12132 Query: 87 agttccgaagtaattacacataatagaaaaatggactcaggttcaagttccgaagtaatt 146 |||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 12131 agtttcgaagtaattacacataataaaaaaatggactcaggctcaagttccgaagtaatt 12072 Query: 147 acacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattggattc 206 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 12071 acacatatagaaattcaaaaagaaatcgatacaatccacgtcataatccatattggattc 12012 Query: 207 ccaaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaggaa 266 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 12011 cccaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaagaa 11952 Query: 267 attaactctgtaaaccagagatttaatatttctatcgaaaaagttaaagaaccttataga 326 |||| ||||||||||||||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 11951 gttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttataga 11892 Query: 327 cagcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 386 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11891 caacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 11832 Query: 387 aaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagta 446 |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 11831 aaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagta 11772 Query: 447 aaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggc 506 |||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || Sbjct: 11771 aaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggt 11712 Query: 507 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 566 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 11711 agacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaact 11652 Query: 567 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 626 ||||||||||||||||| || ||||||||||||||||||||| ||||||||| || | || Sbjct: 11651 atctatggagtattaggagttaaaatttggatattcgtagacaaagaataaccaaccctg 11592 Query: 627 tcttcgaattctgtccattgatagaataaaaaatgacaa 665 ||||| ||||||| || | ||||||||||||||||||| Sbjct: 11591 tcttcccattctgttcagtaatagaataaaaaatgacaa 11553
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 952 bits (480), Expect = 0.0 Identities = 599/639 (93%) Strand = Plus / Minus Query: 27 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaatnagactca 86 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 10371735 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaagcagactca 10371676 Query: 87 agttccgaagtaattacacataatagaaaaatggactcaggttcaagttccgaagtaatt 146 |||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 10371675 agtttcgaagtaattacacataataaaaaaatggactcaggctcaagttccgaagtaatt 10371616 Query: 147 acacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattggattc 206 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 10371615 acacatatagaaattcaaaaagaaatcgatacaatccacgtcataatccatattggattc 10371556 Query: 207 ccaaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaggaa 266 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 10371555 cccaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaagaa 10371496 Query: 267 attaactctgtaaaccagagatttaatatttctatcgaaaaagttaaagaaccttataga 326 |||| ||||||||||||||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 10371495 gttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttataga 10371436 Query: 327 cagcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 386 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10371435 caacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 10371376 Query: 387 aaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagta 446 |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 10371375 aaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagta 10371316 Query: 447 aaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggc 506 |||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || Sbjct: 10371315 aaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggt 10371256 Query: 507 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 566 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 10371255 agacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaact 10371196 Query: 567 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 626 ||||||||||||||||| || ||||||||||||||||||||| ||||||||| || | || Sbjct: 10371195 atctatggagtattaggagttaaaatttggatattcgtagacaaagaataaccaaccctg 10371136 Query: 627 tcttcgaattctgtccattgatagaataaaaaatgacaa 665 ||||| ||||||| || | ||||||||||||||||||| Sbjct: 10371135 tcttcccattctgttcagtaatagaataaaaaatgacaa 10371097 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 tacaaaagaataggaaaaag 56 |||||||||||||||||||| Sbjct: 12236939 tacaaaagaataggaaaaag 12236920
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 952 bits (480), Expect = 0.0 Identities = 599/639 (93%) Strand = Plus / Plus Query: 27 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaatnagactca 86 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 14453752 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaagcagactca 14453811 Query: 87 agttccgaagtaattacacataatagaaaaatggactcaggttcaagttccgaagtaatt 146 |||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 14453812 agtttcgaagtaattacacataataaaaaaatggactcaggctcaagttccgaagtaatt 14453871 Query: 147 acacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattggattc 206 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 14453872 acacatatagaaattcaaaaagaaatcgatacaatccacgtcataatccatattggattc 14453931 Query: 207 ccaaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaggaa 266 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 14453932 cccaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaagaa 14453991 Query: 267 attaactctgtaaaccagagatttaatatttctatcgaaaaagttaaagaaccttataga 326 |||| ||||||||||||||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 14453992 gttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttataga 14454051 Query: 327 cagcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 386 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14454052 caacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 14454111 Query: 387 aaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagta 446 |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 14454112 aaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagta 14454171 Query: 447 aaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggc 506 |||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || Sbjct: 14454172 aaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggt 14454231 Query: 507 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 566 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 14454232 agacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaact 14454291 Query: 567 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 626 ||||||||||||||||| || ||||||||||||||||||||||||||||||| || | || Sbjct: 14454292 atctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctg 14454351 Query: 627 tcttcgaattctgtccattgatagaataaaaaatgacaa 665 ||||| ||||||| || | | ||||||||||||||||| Sbjct: 14454352 tcttcccattctgttcagtaagagaataaaaaatgacaa 14454390 Score = 870 bits (439), Expect = 0.0 Identities = 593/641 (92%), Gaps = 4/641 (0%) Strand = Plus / Plus Query: 27 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaatnagactca 86 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 11893960 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaagcagactca 11894019 Query: 87 agttccgaagtaattacacataatagaaaaa-tggactcaggttcaagttccgaagtaat 145 |||| |||||||||||||||||||| ||||| |||||||||| ||||||||||||||||| Sbjct: 11894020 agtttcgaagtaattacacataataaaaaaaatggactcaggctcaagttccgaagtaat 11894079 Query: 146 tacacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattggatt 205 |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||| Sbjct: 11894080 tacacata--gaaattcaaaaagaaatcgatacaatccatgtcataatacatattggatt 11894137 Query: 206 cccaaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaagga 265 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 11894138 ccccaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaaga 11894197 Query: 266 aattaactctgtaaaccagagatttaatatttctatcgaaaaagttaaagaaccttatag 325 | |||| ||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 11894198 agttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttatag 11894257 Query: 326 acagcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccg 385 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11894258 acaacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattcca 11894317 Query: 386 aaaggcaatgaaaaaagccattgaattaact-aaaaaagcagatataaggggagtaaaag 444 ||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||| Sbjct: 11894318 aaaggcaatgaaaaaagccattgaattaactaaaaaaaacagatataaagggagtaaaag 11894377 Query: 445 taaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggg 504 |||||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| | Sbjct: 11894378 taaaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaag 11894437 Query: 505 gcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaa 564 |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 11894438 atagacttcccctccaaacaattcacgctaaaattgattattgctgctatccaattcgaa 11894497 Query: 565 ctatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatct 624 ||||||||||||||||||| || ||||||||||||||||||||||||||||||| || | Sbjct: 11894498 ctatctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccc 11894557 Query: 625 tgtcttcgaattctgtccattgatagaataaaaaatgacaa 665 ||||||| ||||||| || | ||||||||||||||||||| Sbjct: 11894558 tgtcttcccattctgttcagtaatagaataaaaaatgacaa 11894598
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 952 bits (480), Expect = 0.0 Identities = 599/639 (93%) Strand = Plus / Plus Query: 27 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaatnagactca 86 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 9257124 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaagcagactca 9257183 Query: 87 agttccgaagtaattacacataatagaaaaatggactcaggttcaagttccgaagtaatt 146 |||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 9257184 agtttcgaagtaattacacataataaaaaaatggactcaggctcaagttccgaagtaatt 9257243 Query: 147 acacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattggattc 206 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 9257244 acacatatagaaattcaaaaagaaatcgatacaatccacgtcataatccatattggattc 9257303 Query: 207 ccaaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaggaa 266 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 9257304 cccaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaagaa 9257363 Query: 267 attaactctgtaaaccagagatttaatatttctatcgaaaaagttaaagaaccttataga 326 |||| ||||||||||||||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 9257364 gttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttataga 9257423 Query: 327 cagcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 386 || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9257424 caacctaacattcttgtagaatatatagctttccaattaaaaaatagagtttcattccga 9257483 Query: 387 aaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagta 446 |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 9257484 aaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagta 9257543 Query: 447 aaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggc 506 |||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || Sbjct: 9257544 aaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggt 9257603 Query: 507 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 566 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 9257604 agacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaact 9257663 Query: 567 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 626 ||||||||||||||||| || ||||||||||||||||||||||||||||||| || | || Sbjct: 9257664 atctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctg 9257723 Query: 627 tcttcgaattctgtccattgatagaataaaaaatgacaa 665 ||||| ||||||| || | ||||||||||||||||||| Sbjct: 9257724 tcttcccattctgttcagtaatagaataaaaaatgacaa 9257762 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 tacaaaagaataggaaaaag 56 |||||||||||||||||||| Sbjct: 7605837 tacaaaagaataggaaaaag 7605856
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 952 bits (480), Expect = 0.0 Identities = 599/639 (93%) Strand = Plus / Plus Query: 27 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaatnagactca 86 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 68337 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaagcagactca 68396 Query: 87 agttccgaagtaattacacataatagaaaaatggactcaggttcaagttccgaagtaatt 146 |||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 68397 agtttcgaagtaattacacataataaaaaaatggactcaggctcaagttccgaagtaatt 68456 Query: 147 acacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattggattc 206 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 68457 acacatatagaaattcaaaaagaaatcgatacaatccacgtcataatccatattggattc 68516 Query: 207 ccaaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaggaa 266 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 68517 cccaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaagaa 68576 Query: 267 attaactctgtaaaccagagatttaatatttctatcgaaaaagttaaagaaccttataga 326 |||| ||||||||||||||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 68577 gttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttataga 68636 Query: 327 cagcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 386 || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68637 caacctaacattcttgtagaatatatagctttccaattaaaaaatagagtttcattccga 68696 Query: 387 aaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagta 446 |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 68697 aaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagta 68756 Query: 447 aaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggc 506 |||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || Sbjct: 68757 aaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggt 68816 Query: 507 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 566 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 68817 agacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaact 68876 Query: 567 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 626 ||||||||||||||||| || ||||||||||||||||||||||||||||||| || | || Sbjct: 68877 atctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctg 68936 Query: 627 tcttcgaattctgtccattgatagaataaaaaatgacaa 665 ||||| ||||||| || | ||||||||||||||||||| Sbjct: 68937 tcttcccattctgttcagtaatagaataaaaaatgacaa 68975
>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0465E03 Length = 151206 Score = 952 bits (480), Expect = 0.0 Identities = 599/639 (93%) Strand = Plus / Plus Query: 27 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaatnagactca 86 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 145555 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaagcagactca 145614 Query: 87 agttccgaagtaattacacataatagaaaaatggactcaggttcaagttccgaagtaatt 146 |||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 145615 agtttcgaagtaattacacataataaaaaaatggactcaggctcaagttccgaagtaatt 145674 Query: 147 acacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattggattc 206 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 145675 acacatatagaaattcaaaaagaaatcgatacaatccacgtcataatccatattggattc 145734 Query: 207 ccaaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaggaa 266 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 145735 cccaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaagaa 145794 Query: 267 attaactctgtaaaccagagatttaatatttctatcgaaaaagttaaagaaccttataga 326 |||| ||||||||||||||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 145795 gttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttataga 145854 Query: 327 cagcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 386 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145855 caacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 145914 Query: 387 aaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagta 446 |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 145915 aaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagta 145974 Query: 447 aaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggc 506 |||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || Sbjct: 145975 aaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggt 146034 Query: 507 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 566 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 146035 agacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaact 146094 Query: 567 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 626 ||||||||||||||||| || ||||||||||||||||||||||||||||||| || | || Sbjct: 146095 atctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctg 146154 Query: 627 tcttcgaattctgtccattgatagaataaaaaatgacaa 665 ||||| ||||||| || | | ||||||||||||||||| Sbjct: 146155 tcttcccattctgttcagtaagagaataaaaaatgacaa 146193
>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1585_D02 Length = 103172 Score = 952 bits (480), Expect = 0.0 Identities = 599/639 (93%) Strand = Plus / Plus Query: 27 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaatnagactca 86 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 53317 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaagcagactca 53376 Query: 87 agttccgaagtaattacacataatagaaaaatggactcaggttcaagttccgaagtaatt 146 |||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 53377 agtttcgaagtaattacacataataaaaaaatggactcaggctcaagttccgaagtaatt 53436 Query: 147 acacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattggattc 206 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 53437 acacatatagaaattcaaaaagaaatcgatacaatccacgtcataatccatattggattc 53496 Query: 207 ccaaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaggaa 266 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 53497 cccaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaagaa 53556 Query: 267 attaactctgtaaaccagagatttaatatttctatcgaaaaagttaaagaaccttataga 326 |||| ||||||||||||||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 53557 gttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttataga 53616 Query: 327 cagcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 386 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53617 caacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 53676 Query: 387 aaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagta 446 |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 53677 aaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagta 53736 Query: 447 aaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggc 506 |||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || Sbjct: 53737 aaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggt 53796 Query: 507 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 566 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 53797 agacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaact 53856 Query: 567 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 626 ||||||||||||||||| || ||||||||||||||||||||||||||||||| || | || Sbjct: 53857 atctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctg 53916 Query: 627 tcttcgaattctgtccattgatagaataaaaaatgacaa 665 ||||| ||||||| || | | ||||||||||||||||| Sbjct: 53917 tcttcccattctgttcagtaagagaataaaaaatgacaa 53955
>dbj|AK072149.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128P04, full insert sequence Length = 2475 Score = 952 bits (480), Expect = 0.0 Identities = 599/639 (93%) Strand = Plus / Plus Query: 27 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaatnagactca 86 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 969 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaagcagactca 1028 Query: 87 agttccgaagtaattacacataatagaaaaatggactcaggttcaagttccgaagtaatt 146 |||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 1029 agtttcgaagtaattacacataataaaaaaatggactcaggctcaagttccgaagtaatt 1088 Query: 147 acacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattggattc 206 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1089 acacatatagaaattcaaaaagaaatcgatacaatccacgtcataatccatattggattc 1148 Query: 207 ccaaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaggaa 266 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1149 cccaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaagaa 1208 Query: 267 attaactctgtaaaccagagatttaatatttctatcgaaaaagttaaagaaccttataga 326 |||| ||||||||||||||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 1209 gttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttataga 1268 Query: 327 cagcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 386 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1269 caacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 1328 Query: 387 aaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagta 446 |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 1329 aaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagta 1388 Query: 447 aaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggc 506 |||||||| || ||||||| |||||||||||||| |||||||| | ||| |||| || Sbjct: 1389 aaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgagtgcatcaaaaaaggt 1448 Query: 507 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 566 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1449 agacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaact 1508 Query: 567 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 626 ||||||||||||||||| || ||||||||||||||||||||||||||||||| || | || Sbjct: 1509 atctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctg 1568 Query: 627 tcttcgaattctgtccattgatagaataaaaaatgacaa 665 ||||| ||||||| || | ||||||||||||||||||| Sbjct: 1569 tcttcccattctgttcagtaatagaataaaaaatgacaa 1607
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 952 bits (480), Expect = 0.0 Identities = 599/639 (93%) Strand = Plus / Minus Query: 27 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaatnagactca 86 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 10377774 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaagcagactca 10377715 Query: 87 agttccgaagtaattacacataatagaaaaatggactcaggttcaagttccgaagtaatt 146 |||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 10377714 agtttcgaagtaattacacataataaaaaaatggactcaggctcaagttccgaagtaatt 10377655 Query: 147 acacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattggattc 206 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 10377654 acacatatagaaattcaaaaagaaatcgatacaatccacgtcataatccatattggattc 10377595 Query: 207 ccaaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaggaa 266 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 10377594 cccaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaagaa 10377535 Query: 267 attaactctgtaaaccagagatttaatatttctatcgaaaaagttaaagaaccttataga 326 |||| ||||||||||||||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 10377534 gttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttataga 10377475 Query: 327 cagcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 386 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10377474 caacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 10377415 Query: 387 aaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagta 446 |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 10377414 aaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagta 10377355 Query: 447 aaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggc 506 |||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || Sbjct: 10377354 aaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggt 10377295 Query: 507 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 566 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 10377294 agacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaact 10377235 Query: 567 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 626 ||||||||||||||||| || ||||||||||||||||||||| ||||||||| || | || Sbjct: 10377234 atctatggagtattaggagttaaaatttggatattcgtagacaaagaataaccaaccctg 10377175 Query: 627 tcttcgaattctgtccattgatagaataaaaaatgacaa 665 ||||| ||||||| || | ||||||||||||||||||| Sbjct: 10377174 tcttcccattctgttcagtaatagaataaaaaatgacaa 10377136 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 tacaaaagaataggaaaaag 56 |||||||||||||||||||| Sbjct: 12244279 tacaaaagaataggaaaaag 12244260
>ref|XM_479425.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2380 Score = 944 bits (476), Expect = 0.0 Identities = 598/639 (93%) Strand = Plus / Plus Query: 27 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaatnagactca 86 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 877 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaagcagactca 936 Query: 87 agttccgaagtaattacacataatagaaaaatggactcaggttcaagttccgaagtaatt 146 |||| |||||||||||||||||||| |||||||||||| || |||||||||||||||||| Sbjct: 937 agtttcgaagtaattacacataataaaaaaatggactcgggctcaagttccgaagtaatt 996 Query: 147 acacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattggattc 206 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 997 acacatatagaaattcaaaaagaaatcgatacaatccacgtcataatccatattggattc 1056 Query: 207 ccaaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaggaa 266 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1057 cccaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaagaa 1116 Query: 267 attaactctgtaaaccagagatttaatatttctatcgaaaaagttaaagaaccttataga 326 |||| ||||||||||||||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 1117 gttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttataga 1176 Query: 327 cagcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 386 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1177 caacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 1236 Query: 387 aaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagta 446 |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 1237 aaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagta 1296 Query: 447 aaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggc 506 |||||||| || |||||| |||||||||||||| |||||||||| ||| |||| || Sbjct: 1297 aaaattgcaggctgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggt 1356 Query: 507 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 566 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1357 agacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaact 1416 Query: 567 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 626 ||||||||||||||||| || ||||||||||||||||||||||||||||||| || | || Sbjct: 1417 atctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctg 1476 Query: 627 tcttcgaattctgtccattgatagaataaaaaatgacaa 665 ||||| ||||||| || | ||||||||||||||||||| Sbjct: 1477 tcttcccattctgttcagtaatagaataaaaaatgacaa 1515
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 944 bits (476), Expect = 0.0 Identities = 598/639 (93%) Strand = Plus / Minus Query: 27 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaatnagactca 86 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 27925419 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaagcagactca 27925360 Query: 87 agttccgaagtaattacacataatagaaaaatggactcaggttcaagttccgaagtaatt 146 |||| |||||||||||||||||||| |||||||||||| || |||||||||||||||||| Sbjct: 27925359 agtttcgaagtaattacacataataaaaaaatggactcgggctcaagttccgaagtaatt 27925300 Query: 147 acacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattggattc 206 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 27925299 acacatatagaaattcaaaaagaaatcgatacaatccacgtcataatccatattggattc 27925240 Query: 207 ccaaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaggaa 266 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 27925239 cccaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaagaa 27925180 Query: 267 attaactctgtaaaccagagatttaatatttctatcgaaaaagttaaagaaccttataga 326 |||| ||||||||||||||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 27925179 gttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttataga 27925120 Query: 327 cagcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 386 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27925119 caacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 27925060 Query: 387 aaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagta 446 |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 27925059 aaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagta 27925000 Query: 447 aaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggc 506 |||||||| || |||||| |||||||||||||| |||||||||| ||| |||| || Sbjct: 27924999 aaaattgcaggctgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggt 27924940 Query: 507 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 566 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 27924939 agacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaact 27924880 Query: 567 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 626 ||||||||||||||||| || ||||||||||||||||||||||||||||||| || | || Sbjct: 27924879 atctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctg 27924820 Query: 627 tcttcgaattctgtccattgatagaataaaaaatgacaa 665 ||||| ||||||| || | ||||||||||||||||||| Sbjct: 27924819 tcttcccattctgttcagtaatagaataaaaaatgacaa 27924781
>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E03 Length = 159980 Score = 944 bits (476), Expect = 0.0 Identities = 598/639 (93%) Strand = Plus / Minus Query: 27 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaatnagactca 86 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 88777 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaagcagactca 88718 Query: 87 agttccgaagtaattacacataatagaaaaatggactcaggttcaagttccgaagtaatt 146 |||| |||||||||||||||||||| |||||||||||| || |||||||||||||||||| Sbjct: 88717 agtttcgaagtaattacacataataaaaaaatggactcgggctcaagttccgaagtaatt 88658 Query: 147 acacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattggattc 206 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 88657 acacatatagaaattcaaaaagaaatcgatacaatccacgtcataatccatattggattc 88598 Query: 207 ccaaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaggaa 266 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 88597 cccaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaagaa 88538 Query: 267 attaactctgtaaaccagagatttaatatttctatcgaaaaagttaaagaaccttataga 326 |||| ||||||||||||||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 88537 gttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttataga 88478 Query: 327 cagcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 386 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88477 caacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 88418 Query: 387 aaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagta 446 |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 88417 aaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagta 88358 Query: 447 aaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggc 506 |||||||| || |||||| |||||||||||||| |||||||||| ||| |||| || Sbjct: 88357 aaaattgcaggctgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggt 88298 Query: 507 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 566 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 88297 agacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaact 88238 Query: 567 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 626 ||||||||||||||||| || ||||||||||||||||||||||||||||||| || | || Sbjct: 88237 atctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctg 88178 Query: 627 tcttcgaattctgtccattgatagaataaaaaatgacaa 665 ||||| ||||||| || | ||||||||||||||||||| Sbjct: 88177 tcttcccattctgttcagtaatagaataaaaaatgacaa 88139
>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1343_D04 Length = 143407 Score = 944 bits (476), Expect = 0.0 Identities = 598/639 (93%) Strand = Plus / Minus Query: 27 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaatnagactca 86 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 14753 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaagcagactca 14694 Query: 87 agttccgaagtaattacacataatagaaaaatggactcaggttcaagttccgaagtaatt 146 |||| |||||||||||||||||||| |||||||||||| || |||||||||||||||||| Sbjct: 14693 agtttcgaagtaattacacataataaaaaaatggactcgggctcaagttccgaagtaatt 14634 Query: 147 acacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattggattc 206 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 14633 acacatatagaaattcaaaaagaaatcgatacaatccacgtcataatccatattggattc 14574 Query: 207 ccaaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaggaa 266 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 14573 cccaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaagaa 14514 Query: 267 attaactctgtaaaccagagatttaatatttctatcgaaaaagttaaagaaccttataga 326 |||| ||||||||||||||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 14513 gttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttataga 14454 Query: 327 cagcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 386 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14453 caacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccga 14394 Query: 387 aaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagta 446 |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 14393 aaggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagta 14334 Query: 447 aaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggc 506 |||||||| || |||||| |||||||||||||| |||||||||| ||| |||| || Sbjct: 14333 aaaattgcaggctgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggt 14274 Query: 507 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 566 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 14273 agacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaact 14214 Query: 567 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 626 ||||||||||||||||| || ||||||||||||||||||||||||||||||| || | || Sbjct: 14213 atctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctg 14154 Query: 627 tcttcgaattctgtccattgatagaataaaaaatgacaa 665 ||||| ||||||| || | ||||||||||||||||||| Sbjct: 14153 tcttcccattctgttcagtaatagaataaaaaatgacaa 14115
>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1001_G09 Length = 118018 Score = 870 bits (439), Expect = 0.0 Identities = 593/641 (92%), Gaps = 4/641 (0%) Strand = Plus / Plus Query: 27 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaatnagactca 86 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 75450 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaagcagactca 75509 Query: 87 agttccgaagtaattacacataatagaaaaa-tggactcaggttcaagttccgaagtaat 145 |||| |||||||||||||||||||| ||||| |||||||||| ||||||||||||||||| Sbjct: 75510 agtttcgaagtaattacacataataaaaaaaatggactcaggctcaagttccgaagtaat 75569 Query: 146 tacacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattggatt 205 |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||| Sbjct: 75570 tacacata--gaaattcaaaaagaaatcgatacaatccatgtcataatacatattggatt 75627 Query: 206 cccaaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaagga 265 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 75628 ccccaatttattaaagaaaaaaggagcaatcgaagaattagagaaagatctacaaaaaga 75687 Query: 266 aattaactctgtaaaccagagatttaatatttctatcgaaaaagttaaagaaccttatag 325 | |||| ||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 75688 agttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttatag 75747 Query: 326 acagcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccg 385 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75748 acaacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattcca 75807 Query: 386 aaaggcaatgaaaaaagccattgaattaact-aaaaaagcagatataaggggagtaaaag 444 ||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||| Sbjct: 75808 aaaggcaatgaaaaaagccattgaattaactaaaaaaaacagatataaagggagtaaaag 75867 Query: 445 taaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggg 504 |||||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| | Sbjct: 75868 taaaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaag 75927 Query: 505 gcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaa 564 |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 75928 atagacttcccctccaaacaattcacgctaaaattgattattgctgctatccaattcgaa 75987 Query: 565 ctatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatct 624 ||||||||||||||||||| || ||||||||||||||||||||||||||||||| || | Sbjct: 75988 ctatctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccc 76047 Query: 625 tgtcttcgaattctgtccattgatagaataaaaaatgacaa 665 ||||||| ||||||| || | ||||||||||||||||||| Sbjct: 76048 tgtcttcccattctgttcagtaatagaataaaaaatgacaa 76088
>dbj|AK060382.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-E08, full insert sequence Length = 622 Score = 858 bits (433), Expect = 0.0 Identities = 555/596 (93%) Strand = Plus / Plus Query: 70 aaatagaatnagactcaagttccgaagtaattacacataatagaaaaatggactcaggtt 129 |||||||| ||||| ||||| |||||||||||||||||||| ||||||||||||||| | Sbjct: 1 aaatagaagcagacttaagtttcgaagtaattacacataataaaaaaatggactcaggct 60 Query: 130 caagttccgaagtaattacacatatagaaattcaaaaagaaatcgatacgatccacgtca 189 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 61 caagttccgaagtaattacacatatagaaattcaaaaagaaatcgatacaatccacgtca 120 Query: 190 taatccatattggattcccaaatttattaaagaaaaaaggagcaatcgaagaattagaga 249 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 121 taatccatattggattccccaatttattaaagaaaaaaggagcaatcgaagaattagaga 180 Query: 250 aagatctacaaaaggaaattaactctgtaaaccagagatttaatatttctatcgaaaaag 309 ||||||||||||| ||| |||| ||||||||||||||| |||||||| |||||||||| Sbjct: 181 aagatctacaaaaagaagttaattctgtaaaccagagacttaatattgggatcgaaaaag 240 Query: 310 ttaaagaaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaa 369 | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tgaaagaaccttatagacaacctaacattcttgcagaatatatagctttccaattaaaaa 300 Query: 370 atagagtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagata 429 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 301 atagagtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaaacagata 360 Query: 430 taaggggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccg 489 ||| ||||||||||||||||||||| || ||||||| |||||||||||||| ||||||| Sbjct: 361 taaagggagtaaaagtaaaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccg 420 Query: 490 aatccattaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgct 549 | | ||| |||| || |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 421 agtgcatcaaaaaaggtagacttcccctccaaacaattcgcgctaaaattgattattgct 480 Query: 550 gctatccaattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacg 609 |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 481 gctatccaattcgaactatctatggagtattaggagttaaaatttggatattcgtagacg 540 Query: 610 aagaataactaatcttgtcttcgaattctgtccattgatagaataaaaaatgacaa 665 ||||||||| || | ||||||| ||||||| || | ||||||||||||||||||| Sbjct: 541 aagaataaccaaccctgtcttcccattctgttcagtaatagaataaaaaatgacaa 596 Score = 54.0 bits (27), Expect = 6e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 63 aatagaaaaatagaatnagactcaagttccgaagtaattacacata 108 |||| |||||| || | || |||||||||||||||||||||||||| Sbjct: 39 aataaaaaaatggactcaggctcaagttccgaagtaattacacata 84
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 823 bits (415), Expect = 0.0 Identities = 523/559 (93%) Strand = Plus / Minus Query: 107 taatagaaaaatggactcaggttcaagttccgaagtaattacacatatagaaattcaaaa 166 ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 55873 taataaaaaaatggactcaggctcaagttccgaagtaattacacatatagaaattcaaaa 55814 Query: 167 agaaatcgatacgatccacgtcataatccatattggattcccaaatttattaaagaaaaa 226 |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 55813 agaaatcgatacaatccacgtcataatccatattggattccccaatttattaaagaaaaa 55754 Query: 227 aggagcaatcgaagaattagagaaagatctacaaaaggaaattaactctgtaaaccagag 286 |||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||| Sbjct: 55753 aggagcaatcgaagaattagagaaagatctacaaaaagaagttaattctgtaaaccagag 55694 Query: 287 atttaatatttctatcgaaaaagttaaagaaccttatagacagcctaacattcttgcaga 346 | |||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 55693 acttaatattgggatcgaaaaagtgaaagaaccttatagacaacctaacattcttgcaga 55634 Query: 347 atatatagctttccaattaaaaaatagagtttcattccgaaaggcaatgaaaaaagccat 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 55633 atatatagctttccaattaaaaaatagagtttcattccgaaaggcaatgaaaaaagccat 55574 Query: 407 tgaattaactaaaaaagcagatataaggggagtaaaagtaaaaattgcgggtcgtctcgg 466 |||||||||||||||| ||||||||| ||||||||||||||||||||| || ||||||| Sbjct: 55573 tgaattaactaaaaaaacagatataaagggagtaaaagtaaaaattgcaggccgtctcgc 55514 Query: 467 aggaaaagaaattgcacgtgccgaatccattaaaaggggcagacttcccctccaaacaat 526 |||||||||||||| |||||||||| ||| |||| || |||||||||||||||||||| Sbjct: 55513 gggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggtagacttcccctccaaacaat 55454 Query: 527 ccgcgctaaaattgattattgctgctatccaattcgaactatctatggagtattaggtgt 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 55453 tcgcgctaaaattgattattgctgctatccaattcgaactatctatggagtattaggagt 55394 Query: 587 aaaaatttggatattcgtagacgaagaataactaatcttgtcttcgaattctgtccattg 646 ||||||||||||||||||||||||||||||| || | ||||||| ||||||| || | Sbjct: 55393 taaaatttggatattcgtagacgaagaataaccaaccctgtcttcccattctgttcagta 55334 Query: 647 atagaataaaaaatgacaa 665 ||||||||||||||||||| Sbjct: 55333 atagaataaaaaatgacaa 55315 Score = 54.0 bits (27), Expect = 6e-04 Identities = 41/46 (89%) Strand = Plus / Minus Query: 63 aatagaaaaatagaatnagactcaagttccgaagtaattacacata 108 |||| |||||| || | || |||||||||||||||||||||||||| Sbjct: 55872 aataaaaaaatggactcaggctcaagttccgaagtaattacacata 55827
>gb|AC134345.2| Oryza sativa (jpaonica cultivar-group) chromosome 5 PAC clone P0012A07, complete sequence Length = 136858 Score = 823 bits (415), Expect = 0.0 Identities = 523/559 (93%) Strand = Plus / Minus Query: 107 taatagaaaaatggactcaggttcaagttccgaagtaattacacatatagaaattcaaaa 166 ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 128701 taataaaaaaatggactcaggctcaagttccgaagtaattacacatatagaaattcaaaa 128642 Query: 167 agaaatcgatacgatccacgtcataatccatattggattcccaaatttattaaagaaaaa 226 |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 128641 agaaatcgatacaatccacgtcataatccatattggattccccaatttattaaagaaaaa 128582 Query: 227 aggagcaatcgaagaattagagaaagatctacaaaaggaaattaactctgtaaaccagag 286 |||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||| Sbjct: 128581 aggagcaatcgaagaattagagaaagatctacaaaaagaagttaattctgtaaaccagag 128522 Query: 287 atttaatatttctatcgaaaaagttaaagaaccttatagacagcctaacattcttgcaga 346 | |||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 128521 acttaatattgggatcgaaaaagtgaaagaaccttatagacaacctaacattcttgcaga 128462 Query: 347 atatatagctttccaattaaaaaatagagtttcattccgaaaggcaatgaaaaaagccat 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128461 atatatagctttccaattaaaaaatagagtttcattccgaaaggcaatgaaaaaagccat 128402 Query: 407 tgaattaactaaaaaagcagatataaggggagtaaaagtaaaaattgcgggtcgtctcgg 466 |||||||||||||||| ||||||||| ||||||||||||||||||||| || ||||||| Sbjct: 128401 tgaattaactaaaaaaacagatataaagggagtaaaagtaaaaattgcaggccgtctcgc 128342 Query: 467 aggaaaagaaattgcacgtgccgaatccattaaaaggggcagacttcccctccaaacaat 526 |||||||||||||| |||||||||| ||| |||| || |||||||||||||||||||| Sbjct: 128341 gggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggtagacttcccctccaaacaat 128282 Query: 527 ccgcgctaaaattgattattgctgctatccaattcgaactatctatggagtattaggtgt 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 128281 tcgcgctaaaattgattattgctgctatccaattcgaactatctatggagtattaggagt 128222 Query: 587 aaaaatttggatattcgtagacgaagaataactaatcttgtcttcgaattctgtccattg 646 ||||||||||||||||||||||||||||||| || | ||||||| ||||||| || | Sbjct: 128221 taaaatttggatattcgtagacgaagaataaccaaccctgtcttcccattctgttcagta 128162 Query: 647 atagaataaaaaatgacaa 665 ||||||||||||||||||| Sbjct: 128161 atagaataaaaaatgacaa 128143 Score = 54.0 bits (27), Expect = 6e-04 Identities = 41/46 (89%) Strand = Plus / Minus Query: 63 aatagaaaaatagaatnagactcaagttccgaagtaattacacata 108 |||| |||||| || | || |||||||||||||||||||||||||| Sbjct: 128700 aataaaaaaatggactcaggctcaagttccgaagtaattacacata 128655
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 823 bits (415), Expect = 0.0 Identities = 523/559 (93%) Strand = Plus / Minus Query: 107 taatagaaaaatggactcaggttcaagttccgaagtaattacacatatagaaattcaaaa 166 ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 12758414 taataaaaaaatggactcaggctcaagttccgaagtaattacacatatagaaattcaaaa 12758355 Query: 167 agaaatcgatacgatccacgtcataatccatattggattcccaaatttattaaagaaaaa 226 |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 12758354 agaaatcgatacaatccacgtcataatccatattggattccccaatttattaaagaaaaa 12758295 Query: 227 aggagcaatcgaagaattagagaaagatctacaaaaggaaattaactctgtaaaccagag 286 |||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||| Sbjct: 12758294 aggagcaatcgaagaattagagaaagatctacaaaaagaagttaattctgtaaaccagag 12758235 Query: 287 atttaatatttctatcgaaaaagttaaagaaccttatagacagcctaacattcttgcaga 346 | |||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 12758234 acttaatattgggatcgaaaaagtgaaagaaccttatagacaacctaacattcttgcaga 12758175 Query: 347 atatatagctttccaattaaaaaatagagtttcattccgaaaggcaatgaaaaaagccat 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12758174 atatatagctttccaattaaaaaatagagtttcattccgaaaggcaatgaaaaaagccat 12758115 Query: 407 tgaattaactaaaaaagcagatataaggggagtaaaagtaaaaattgcgggtcgtctcgg 466 |||||||||||||||| ||||||||| ||||||||||||||||||||| || ||||||| Sbjct: 12758114 tgaattaactaaaaaaacagatataaagggagtaaaagtaaaaattgcaggccgtctcgc 12758055 Query: 467 aggaaaagaaattgcacgtgccgaatccattaaaaggggcagacttcccctccaaacaat 526 |||||||||||||| |||||||||| ||| |||| || |||||||||||||||||||| Sbjct: 12758054 gggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggtagacttcccctccaaacaat 12757995 Query: 527 ccgcgctaaaattgattattgctgctatccaattcgaactatctatggagtattaggtgt 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 12757994 tcgcgctaaaattgattattgctgctatccaattcgaactatctatggagtattaggagt 12757935 Query: 587 aaaaatttggatattcgtagacgaagaataactaatcttgtcttcgaattctgtccattg 646 ||||||||||||||||||||||||||||||| || | ||||||| ||||||| || | Sbjct: 12757934 taaaatttggatattcgtagacgaagaataaccaaccctgtcttcccattctgttcagta 12757875 Query: 647 atagaataaaaaatgacaa 665 ||||||||||||||||||| Sbjct: 12757874 atagaataaaaaatgacaa 12757856 Score = 289 bits (146), Expect = 6e-75 Identities = 234/262 (89%), Gaps = 1/262 (0%) Strand = Plus / Plus Query: 404 cattgaattaactaaaaaagcagatataaggggagtaaaagtaaaaattgcgggtcgtct 463 ||||||||||||||||||| || |||||| ||||||||||||||||||||| || ||||| Sbjct: 19543473 cattgaattaactaaaaaa-catatataaagggagtaaaagtaaaaattgcaggccgtct 19543531 Query: 464 cggaggaaaagaaattgcacgtgccgaatccattaaaaggggcagacttcccctccaaac 523 || |||||||||||||| |||||||||| ||| |||| || ||||||||||||||||| Sbjct: 19543532 cgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggtagacttcccctccaaac 19543591 Query: 524 aatccgcgctaaaattgattattgctgctatccaattcgaactatctatggagtattagg 583 ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19543592 aattcgatctaaaattgattattgctgctatccaattcgaactatctatggagtattagg 19543651 Query: 584 tgtaaaaatttggatattcgtagacgaagaataactaatcttgtcttcgaattctgtcca 643 || |||||||||||||||||||| |||||||||| || | ||||||| ||||||| | Sbjct: 19543652 agttaaaatttggatattcgtagatgaagaataaccaaccctgtcttcccattctgttaa 19543711 Query: 644 ttgatagaataaaaaatgacaa 665 | ||||||||||||||||||| Sbjct: 19543712 gtaatagaataaaaaatgacaa 19543733 Score = 54.0 bits (27), Expect = 6e-04 Identities = 41/46 (89%) Strand = Plus / Minus Query: 63 aatagaaaaatagaatnagactcaagttccgaagtaattacacata 108 |||| |||||| || | || |||||||||||||||||||||||||| Sbjct: 12758413 aataaaaaaatggactcaggctcaagttccgaagtaattacacata 12758368 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 atttattaaagaaaaaagga 230 |||||||||||||||||||| Sbjct: 19753360 atttattaaagaaaaaagga 19753379
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 777 bits (392), Expect = 0.0 Identities = 512/552 (92%) Strand = Plus / Minus Query: 108 aatagaaaaatggactcaggttcaagttccgaagtaattacacatatagaaattcaaaaa 167 |||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 2763 aatagaaaaatggaatcagactcaagttctgaagtaattacacatatagaaattcaaaaa 2704 Query: 168 gaaatcgatacgatccacgtcataatccatattggattcccaaatttattaaagaaaaaa 227 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2703 gaaatcgatacaatccacgtcataatccatattggattcccaaatttattaaagaaaaag 2644 Query: 228 ggagcaatcgaagaattagagaaagatctacaaaaggaaattaactctgtaaaccagaga 287 ||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||| Sbjct: 2643 ggagcaatcgaagaattagagaaagatctccaaaaggaagttaattctgtaaaccagaga 2584 Query: 288 tttaatatttctatcgaaaaagttaaagaaccttatagacagcctaacattcttgcagaa 347 |||||||| |||||||||| |||||||||||||||||||| ||||| |||||||| ||| Sbjct: 2583 cttaatattgctatcgaaaaggttaaagaaccttatagacaacctaatattcttgcggaa 2524 Query: 348 tatatagctttccaattaaaaaatagagtttcattccgaaaggcaatgaaaaaagccatt 407 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 2523 tatatagctttccaattaaaaaatagagtttcattccgaaaagcaatgaaaaaagctatt 2464 Query: 408 gaattaactaaaaaagcagatataaggggagtaaaagtaaaaattgcgggtcgtctcgga 467 ||||||||||||||||| ||||||| |||| ||||| | |||||||||||||||| | | Sbjct: 2463 gaattaactaaaaaagcggatataaagggaataaaaatccaaattgcgggtcgtctagca 2404 Query: 468 ggaaaagaaattgcacgtgccgaatccattaaaaggggcagacttcccctccaaacaatc 527 ||||||||||||||||||||||||| ||| |||| ||| ||||| |||||||||||||| Sbjct: 2403 ggaaaagaaattgcacgtgccgaatgcatcaaaaagggtagactacccctccaaacaatt 2344 Query: 528 cgcgctaaaattgattattgctgctatccaattcgaactatctatggagtattaggtgta 587 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2343 cgcgctaaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtc 2284 Query: 588 aaaatttggatattcgtagacgaagaataactaatcttgtcttcgaattctgtccattga 647 |||||||||||||||||||| ||||||||||||| | ||||||| |||| | ||| ||| Sbjct: 2283 aaaatttggatattcgtagaagaagaataactaaccatgtcttcccattccgcccagtga 2224 Query: 648 tagaataaaaaa 659 |||||||||||| Sbjct: 2223 tagaataaaaaa 2212 Score = 133 bits (67), Expect = 8e-28 Identities = 78/82 (95%) Strand = Plus / Minus Query: 27 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaatnagactca 86 ||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||| Sbjct: 2799 aagaactatatacaaaagaataggaaaaaaggctcgaatagaaaaatggaatcagactca 2740 Query: 87 agttccgaagtaattacacata 108 ||||| |||||||||||||||| Sbjct: 2739 agttctgaagtaattacacata 2718
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 777 bits (392), Expect = 0.0 Identities = 512/552 (92%) Strand = Plus / Minus Query: 108 aatagaaaaatggactcaggttcaagttccgaagtaattacacatatagaaattcaaaaa 167 |||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 82320 aatagaaaaatggaatcagactcaagttctgaagtaattacacatatagaaattcaaaaa 82261 Query: 168 gaaatcgatacgatccacgtcataatccatattggattcccaaatttattaaagaaaaaa 227 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82260 gaaatcgatacaatccacgtcataatccatattggattcccaaatttattaaagaaaaag 82201 Query: 228 ggagcaatcgaagaattagagaaagatctacaaaaggaaattaactctgtaaaccagaga 287 ||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||| Sbjct: 82200 ggagcaatcgaagaattagagaaagatctccaaaaggaagttaattctgtaaaccagaga 82141 Query: 288 tttaatatttctatcgaaaaagttaaagaaccttatagacagcctaacattcttgcagaa 347 |||||||| |||||||||| |||||||||||||||||||| ||||| |||||||| ||| Sbjct: 82140 cttaatattgctatcgaaaaggttaaagaaccttatagacaacctaatattcttgcggaa 82081 Query: 348 tatatagctttccaattaaaaaatagagtttcattccgaaaggcaatgaaaaaagccatt 407 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 82080 tatatagctttccaattaaaaaatagagtttcattccgaaaagcaatgaaaaaagctatt 82021 Query: 408 gaattaactaaaaaagcagatataaggggagtaaaagtaaaaattgcgggtcgtctcgga 467 ||||||||||||||||| ||||||| |||| ||||| | |||||||||||||||| | | Sbjct: 82020 gaattaactaaaaaagcggatataaagggaataaaaatccaaattgcgggtcgtctagca 81961 Query: 468 ggaaaagaaattgcacgtgccgaatccattaaaaggggcagacttcccctccaaacaatc 527 ||||||||||||||||||||||||| ||| |||| ||| ||||| |||||||||||||| Sbjct: 81960 ggaaaagaaattgcacgtgccgaatgcatcaaaaagggtagactacccctccaaacaatt 81901 Query: 528 cgcgctaaaattgattattgctgctatccaattcgaactatctatggagtattaggtgta 587 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81900 cgcgctaaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtc 81841 Query: 588 aaaatttggatattcgtagacgaagaataactaatcttgtcttcgaattctgtccattga 647 |||||||||||||||||||| ||||||||||||| | ||||||| |||| | ||| ||| Sbjct: 81840 aaaatttggatattcgtagaagaagaataactaaccatgtcttcccattccgcccagtga 81781 Query: 648 tagaataaaaaa 659 |||||||||||| Sbjct: 81780 tagaataaaaaa 81769 Score = 133 bits (67), Expect = 8e-28 Identities = 78/82 (95%) Strand = Plus / Minus Query: 27 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaatnagactca 86 ||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||| Sbjct: 82356 aagaactatatacaaaagaataggaaaaaaggctcgaatagaaaaatggaatcagactca 82297 Query: 87 agttccgaagtaattacacata 108 ||||| |||||||||||||||| Sbjct: 82296 agttctgaagtaattacacata 82275
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 761 bits (384), Expect = 0.0 Identities = 510/552 (92%) Strand = Plus / Minus Query: 108 aatagaaaaatggactcaggttcaagttccgaagtaattacacatatagaaattcaaaaa 167 |||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 81652 aatagaaaaatggaatcagactcaagttctgaagtaattacacatatagaaattcaaaaa 81593 Query: 168 gaaatcgatacgatccacgtcataatccatattggattcccaaatttattaaagaaaaaa 227 ||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 81592 gaaatcgatacaatccacgtcataatccatattggattccccaacttattaaagaaaaag 81533 Query: 228 ggagcaatcgaagaattagagaaagatctacaaaaggaaattaactctgtaaaccagaga 287 ||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||| Sbjct: 81532 ggagcaatcgaagaattagagaaagatctccaaaaggaagttaattctgtaaaccagaga 81473 Query: 288 tttaatatttctatcgaaaaagttaaagaaccttatagacagcctaacattcttgcagaa 347 |||||||| |||||||||| |||||||||||||||||||| ||||| |||||||| ||| Sbjct: 81472 cttaatattgctatcgaaaaggttaaagaaccttatagacaacctaatattcttgcggaa 81413 Query: 348 tatatagctttccaattaaaaaatagagtttcattccgaaaggcaatgaaaaaagccatt 407 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 81412 tatatagctttccaattaaaaaatagagtttcattccgaaaagcaatgaaaaaagctatt 81353 Query: 408 gaattaactaaaaaagcagatataaggggagtaaaagtaaaaattgcgggtcgtctcgga 467 ||||||||||||||||| ||||||| |||| ||||| | |||||||||||||||| | | Sbjct: 81352 gaattaactaaaaaagcggatataaagggaataaaaatccaaattgcgggtcgtctagca 81293 Query: 468 ggaaaagaaattgcacgtgccgaatccattaaaaggggcagacttcccctccaaacaatc 527 ||||||||||||||||||||||||| ||| |||| ||| ||||| |||||||||||||| Sbjct: 81292 ggaaaagaaattgcacgtgccgaatgcatcaaaaagggtagactacccctccaaacaatt 81233 Query: 528 cgcgctaaaattgattattgctgctatccaattcgaactatctatggagtattaggtgta 587 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81232 cgcgctaaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtc 81173 Query: 588 aaaatttggatattcgtagacgaagaataactaatcttgtcttcgaattctgtccattga 647 |||||||||||||||||||| ||||||||||||| | ||||||| |||| | ||| ||| Sbjct: 81172 aaaatttggatattcgtagaagaagaataactaaccatgtcttcccattccgcccagtga 81113 Query: 648 tagaataaaaaa 659 |||||||||||| Sbjct: 81112 tagaataaaaaa 81101 Score = 133 bits (67), Expect = 8e-28 Identities = 78/82 (95%) Strand = Plus / Minus Query: 27 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaatnagactca 86 ||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||| Sbjct: 81688 aagaactatatacaaaagaataggaaaaaaggctcgaatagaaaaatggaatcagactca 81629 Query: 87 agttccgaagtaattacacata 108 ||||| |||||||||||||||| Sbjct: 81628 agttctgaagtaattacacata 81607
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 753 bits (380), Expect = 0.0 Identities = 510/552 (92%), Gaps = 1/552 (0%) Strand = Plus / Minus Query: 108 aatagaaaaatggactcaggttcaagttccgaagtaattacacatatagaaattcaaaaa 167 |||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 81622 aatagaaaaatggaatcagactcaagttctgaagtaattacacatatagaaattcaaaaa 81563 Query: 168 gaaatcgatacgatccacgtcataatccatattggattcccaaatttattaaagaaaaaa 227 ||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 81562 gaaatcgatacaatccacgtcataatccatattggattccccaacttattaaagaaaaag 81503 Query: 228 ggagcaatcgaagaattagagaaagatctacaaaaggaaattaactctgtaaaccagaga 287 ||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||| Sbjct: 81502 ggagcaatcgaagaattagagaaagatctccaaaaggaagttaattctgtaaaccagaga 81443 Query: 288 tttaatatttctatcgaaaaagttaaagaaccttatagacagcctaacattcttgcagaa 347 |||||||| |||||||||| |||||||||||||||||||| ||||| |||||||| ||| Sbjct: 81442 cttaatattgctatcgaaaaggttaaagaaccttatagacaacctaatattcttgcggaa 81383 Query: 348 tatatagctttccaattaaaaaatagagtttcattccgaaaggcaatgaaaaaagccatt 407 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 81382 tatatagctttccaattaaaaaatagagtttcattccgaaaagcaatgaaaaaagctatt 81323 Query: 408 gaattaactaaaaaagcagatataaggggagtaaaagtaaaaattgcgggtcgtctcgga 467 ||||||||||||||||| ||||||| |||| ||||| | |||||||||||||||| | | Sbjct: 81322 gaattaactaaaaaagcggatataaagggaataaaaatccaaattgcgggtcgtctagca 81263 Query: 468 ggaaaagaaattgcacgtgccgaatccattaaaaggggcagacttcccctccaaacaatc 527 ||||||||||||||||||||||||| ||| |||| ||| ||||| |||||||||||||| Sbjct: 81262 ggaaaagaaattgcacgtgccgaatgcatcaaaaagggtagactacccctccaaacaatt 81203 Query: 528 cgcgctaaaattgattattgctgctatccaattcgaactatctatggagtattaggtgta 587 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81202 cgcgctaaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtc 81143 Query: 588 aaaatttggatattcgtagacgaagaataactaatcttgtcttcgaattctgtccattga 647 |||||||||||||||||||| ||||||||||||| | ||||||| |||| | ||| ||| Sbjct: 81142 aaaatttggatattcgtagaagaagaataactaaccatgtcttcccattccg-ccagtga 81084 Query: 648 tagaataaaaaa 659 |||||||||||| Sbjct: 81083 tagaataaaaaa 81072 Score = 133 bits (67), Expect = 8e-28 Identities = 78/82 (95%) Strand = Plus / Minus Query: 27 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaatnagactca 86 ||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||| Sbjct: 81658 aagaactatatacaaaagaataggaaaaaaggctcgaatagaaaaatggaatcagactca 81599 Query: 87 agttccgaagtaattacacata 108 ||||| |||||||||||||||| Sbjct: 81598 agttctgaagtaattacacata 81577
>emb|Y00340.1|CHZMRPS3 Maize chloroplast rps3 gene for ribosomal protein S3 Length = 731 Score = 745 bits (376), Expect = 0.0 Identities = 487/524 (92%) Strand = Plus / Plus Query: 108 aatagaaaaatggactcaggttcaagttccgaagtaattacacatatagaaattcaaaaa 167 |||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 194 aatagaaaaatggaatcagactcaagttctgaagtaattacacatatagaaattcaaaaa 253 Query: 168 gaaatcgatacgatccacgtcataatccatattggattcccaaatttattaaagaaaaaa 227 ||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 254 gaaatcgatacaatccacgtcataatccatattggattccccaacttattaaagaaaaag 313 Query: 228 ggagcaatcgaagaattagagaaagatctacaaaaggaaattaactctgtaaaccagaga 287 ||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||| Sbjct: 314 ggagcaatcgaagaattagagaaagatctccaaaaggaagttaattctgtaaaccagaga 373 Query: 288 tttaatatttctatcgaaaaagttaaagaaccttatagacagcctaacattcttgcagaa 347 |||||||| |||||||||| |||||||||||||||||||| ||||| |||||||| ||| Sbjct: 374 cttaatattgctatcgaaaaggttaaagaaccttatagacaacctaatattcttgcggaa 433 Query: 348 tatatagctttccaattaaaaaatagagtttcattccgaaaggcaatgaaaaaagccatt 407 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 434 tatatagctttccaattaaaaaatagagtttcattccgaaaagcaatgaaaaaagctatt 493 Query: 408 gaattaactaaaaaagcagatataaggggagtaaaagtaaaaattgcgggtcgtctcgga 467 ||||||||||||||||| ||||||| |||| ||||| | |||||||||||||||| | | Sbjct: 494 gaattaactaaaaaagcggatataaagggaataaaaatccaaattgcgggtcgtctagca 553 Query: 468 ggaaaagaaattgcacgtgccgaatccattaaaaggggcagacttcccctccaaacaatc 527 ||||||||||||||||||||||||| ||| |||| ||| ||||| |||||||||||||| Sbjct: 554 ggaaaagaaattgcacgtgccgaatgcatcaaaaagggtagactacccctccaaacaatt 613 Query: 528 cgcgctaaaattgattattgctgctatccaattcgaactatctatggagtattaggtgta 587 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 614 cgcgctaaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtc 673 Query: 588 aaaatttggatattcgtagacgaagaataactaatcttgtcttc 631 |||||||||||||||||||| ||||||||||||| | ||||||| Sbjct: 674 aaaatttggatattcgtagaagaagaataactaaccatgtcttc 717 Score = 133 bits (67), Expect = 8e-28 Identities = 78/82 (95%) Strand = Plus / Plus Query: 27 aagaactatatacaaaagaataggaaaaagggctcgaatagaaaaatagaatnagactca 86 ||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||| Sbjct: 158 aagaactatatacaaaagaataggaaaaaaggctcgaatagaaaaatggaatcagactca 217 Query: 87 agttccgaagtaattacacata 108 ||||| |||||||||||||||| Sbjct: 218 agttctgaagtaattacacata 239
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 466 bits (235), Expect = e-128 Identities = 359/399 (89%), Gaps = 1/399 (0%) Strand = Plus / Minus Query: 268 ttaactctgtaaaccagagatttaatatttctatcgaaaaagttaaagaaccttatagac 327 |||| ||||||||||||||| |||||||| ||||||||||| |||||| ||||||||| Sbjct: 17405191 ttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaatcttatagac 17405132 Query: 328 agcctaacattcttgcagaatatatagctttccaattaaaaaa-tagagtttcattccga 386 | |||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 17405131 aacctatcattcttgtagaatatatagctttccaattaaaaaaatagagtttcattccga 17405072 Query: 387 aaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagta 446 |||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 17405071 aaggcaatgaaaaaaggcattgaattaactaaaaaaatggatataaagggagtaaaagta 17405012 Query: 447 aaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggc 506 |||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || Sbjct: 17405011 aaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggt 17404952 Query: 507 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 566 |||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||| Sbjct: 17404951 agacttcccctccaaacaattcgtgctaaaattgattattgctgctattcaattcgaact 17404892 Query: 567 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 626 ||||||||||||||||| || ||||||||||||||||||||||||||||||| || | || Sbjct: 17404891 atctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctg 17404832 Query: 627 tcttcgaattctgtccattgatagaataaaaaatgacaa 665 ||||| ||| ||| || | ||||||||||||||||||| Sbjct: 17404831 tcttcccattatgttcagtaatagaataaaaaatgacaa 17404793 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 349 atatagctttccaattaaaaaata 372 |||||| ||||||||||||||||| Sbjct: 2333544 atatagatttccaattaaaaaata 2333521
>dbj|AP003203.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1080D07 Length = 173856 Score = 466 bits (235), Expect = e-128 Identities = 359/399 (89%), Gaps = 1/399 (0%) Strand = Plus / Minus Query: 268 ttaactctgtaaaccagagatttaatatttctatcgaaaaagttaaagaaccttatagac 327 |||| ||||||||||||||| |||||||| ||||||||||| |||||| ||||||||| Sbjct: 171452 ttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaatcttatagac 171393 Query: 328 agcctaacattcttgcagaatatatagctttccaattaaaaaa-tagagtttcattccga 386 | |||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 171392 aacctatcattcttgtagaatatatagctttccaattaaaaaaatagagtttcattccga 171333 Query: 387 aaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagta 446 |||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 171332 aaggcaatgaaaaaaggcattgaattaactaaaaaaatggatataaagggagtaaaagta 171273 Query: 447 aaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggc 506 |||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || Sbjct: 171272 aaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggt 171213 Query: 507 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 566 |||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||| Sbjct: 171212 agacttcccctccaaacaattcgtgctaaaattgattattgctgctattcaattcgaact 171153 Query: 567 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 626 ||||||||||||||||| || ||||||||||||||||||||||||||||||| || | || Sbjct: 171152 atctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctg 171093 Query: 627 tcttcgaattctgtccattgatagaataaaaaatgacaa 665 ||||| ||| ||| || | ||||||||||||||||||| Sbjct: 171092 tcttcccattatgttcagtaatagaataaaaaatgacaa 171054
>dbj|AP003144.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0507H06 Length = 136351 Score = 466 bits (235), Expect = e-128 Identities = 359/399 (89%), Gaps = 1/399 (0%) Strand = Plus / Minus Query: 268 ttaactctgtaaaccagagatttaatatttctatcgaaaaagttaaagaaccttatagac 327 |||| ||||||||||||||| |||||||| ||||||||||| |||||| ||||||||| Sbjct: 58583 ttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaatcttatagac 58524 Query: 328 agcctaacattcttgcagaatatatagctttccaattaaaaaa-tagagtttcattccga 386 | |||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 58523 aacctatcattcttgtagaatatatagctttccaattaaaaaaatagagtttcattccga 58464 Query: 387 aaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagta 446 |||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 58463 aaggcaatgaaaaaaggcattgaattaactaaaaaaatggatataaagggagtaaaagta 58404 Query: 447 aaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggc 506 |||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || Sbjct: 58403 aaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggt 58344 Query: 507 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 566 |||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||| Sbjct: 58343 agacttcccctccaaacaattcgtgctaaaattgattattgctgctattcaattcgaact 58284 Query: 567 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 626 ||||||||||||||||| || ||||||||||||||||||||||||||||||| || | || Sbjct: 58283 atctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctg 58224 Query: 627 tcttcgaattctgtccattgatagaataaaaaatgacaa 665 ||||| ||| ||| || | ||||||||||||||||||| Sbjct: 58223 tcttcccattatgttcagtaatagaataaaaaatgacaa 58185
>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006J12, complete sequence Length = 157069 Score = 289 bits (146), Expect = 6e-75 Identities = 234/262 (89%), Gaps = 1/262 (0%) Strand = Plus / Plus Query: 404 cattgaattaactaaaaaagcagatataaggggagtaaaagtaaaaattgcgggtcgtct 463 ||||||||||||||||||| || |||||| ||||||||||||||||||||| || ||||| Sbjct: 144185 cattgaattaactaaaaaa-catatataaagggagtaaaagtaaaaattgcaggccgtct 144243 Query: 464 cggaggaaaagaaattgcacgtgccgaatccattaaaaggggcagacttcccctccaaac 523 || |||||||||||||| |||||||||| ||| |||| || ||||||||||||||||| Sbjct: 144244 cgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggtagacttcccctccaaac 144303 Query: 524 aatccgcgctaaaattgattattgctgctatccaattcgaactatctatggagtattagg 583 ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144304 aattcgatctaaaattgattattgctgctatccaattcgaactatctatggagtattagg 144363 Query: 584 tgtaaaaatttggatattcgtagacgaagaataactaatcttgtcttcgaattctgtcca 643 || |||||||||||||||||||| |||||||||| || | ||||||| ||||||| | Sbjct: 144364 agttaaaatttggatattcgtagatgaagaataaccaaccctgtcttcccattctgttaa 144423 Query: 644 ttgatagaataaaaaatgacaa 665 | ||||||||||||||||||| Sbjct: 144424 gtaatagaataaaaaatgacaa 144445
>gb|AC104708.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1174_H11, complete sequence Length = 102567 Score = 289 bits (146), Expect = 6e-75 Identities = 234/262 (89%), Gaps = 1/262 (0%) Strand = Plus / Plus Query: 404 cattgaattaactaaaaaagcagatataaggggagtaaaagtaaaaattgcgggtcgtct 463 ||||||||||||||||||| || |||||| ||||||||||||||||||||| || ||||| Sbjct: 3372 cattgaattaactaaaaaa-catatataaagggagtaaaagtaaaaattgcaggccgtct 3430 Query: 464 cggaggaaaagaaattgcacgtgccgaatccattaaaaggggcagacttcccctccaaac 523 || |||||||||||||| |||||||||| ||| |||| || ||||||||||||||||| Sbjct: 3431 cgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggtagacttcccctccaaac 3490 Query: 524 aatccgcgctaaaattgattattgctgctatccaattcgaactatctatggagtattagg 583 ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3491 aattcgatctaaaattgattattgctgctatccaattcgaactatctatggagtattagg 3550 Query: 584 tgtaaaaatttggatattcgtagacgaagaataactaatcttgtcttcgaattctgtcca 643 || |||||||||||||||||||| |||||||||| || | ||||||| ||||||| | Sbjct: 3551 agttaaaatttggatattcgtagatgaagaataaccaaccctgtcttcccattctgttaa 3610 Query: 644 ttgatagaataaaaaatgacaa 665 | ||||||||||||||||||| Sbjct: 3611 gtaatagaataaaaaatgacaa 3632
>gb|DQ069461.1| Typha latifolia ribosomal protein S3 (rps3) gene, partial cds; chloroplast Length = 654 Score = 287 bits (145), Expect = 2e-74 Identities = 396/480 (82%), Gaps = 6/480 (1%) Strand = Plus / Plus Query: 137 cgaagtaattacacatatagaaattcaaaaagaaatcgatacgatccacgtcataatcca 196 ||||| |||| ||| ||||| |||||||||| |||||||| |||||| ||||||||||| Sbjct: 171 cgaaggaattgcacgtataggaattcaaaaaaaaatcgatttgatccaggtcataatcca 230 Query: 197 tattggattcccaaatttattaaa------gaaaaaaggagcaatcgaagaattagagaa 250 ||||||||||||||||||||||| | ||| | ||| |||||||||||| ||| Sbjct: 231 tattggattcccaaatttattaatcgaggggcaaacacgaggaatcgaagaattgcagat 290 Query: 251 agatctacaaaaggaaattaactctgtaaaccagagatttaatatttctatcgaaaaagt 310 | || ||||||| || || | |||||||||| ||| | || ||| ||||| || ||| Sbjct: 291 aaatgtacaaaaagagttttattctgtaaaccgaagactcaacattgctatcacaagagt 350 Query: 311 taaagaaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaa 370 | || |||||||| |||| ||||| |||||| |||||||||||||||| ||||||||||| Sbjct: 351 tgaaaaaccttatggacaacctaatattctttcagaatatatagctttacaattaaaaaa 410 Query: 371 tagagtttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatat 430 ||||||||| || ||||| |||||||||||||| |||||||||||| || || | |||| Sbjct: 411 tagagtttcgtttcgaaaagcaatgaaaaaagctattgaattaactgaacaaacggatac 470 Query: 431 aaggggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccga 490 || ||| | |||| ||||||| || ||| ||| ||||||||||||||||||| ||| Sbjct: 471 aaaaggaattcaagtgcaaattgcaggccgtatcgacggaaaagaaattgcacgtgtcga 530 Query: 491 atccattaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctg 550 || || | | ||| ||| ||||||| |||||||| ||||||||||||||| |||| | Sbjct: 531 atggatcagagagggtagagttcccctacaaacaattcgcgctaaaattgatcattgttc 590 Query: 551 ctatccaattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacga 610 |||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||| Sbjct: 591 ctatacaattcgaactatctatggagtattaggcataaaaatttggatatttgtagacga 650 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 27 aagaactatatacaaaagaatagga 51 ||||||||| ||||||||||||||| Sbjct: 130 aagaactatgtacaaaagaatagga 154
>gb|DQ069462.1| Yucca schidigera ribosomal protein S3 (rps3) gene, partial cds; chloroplast Length = 660 Score = 204 bits (103), Expect = 3e-49 Identities = 250/299 (83%) Strand = Plus / Plus Query: 316 aaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagag 375 |||||||| |||| ||||| ||||||||||||||||| |||| ||||||| |||||||| Sbjct: 362 aaccttatggacaccctaatattcttgcagaatatatggcttcacaattaagaaatagag 421 Query: 376 tttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggg 435 |||| ||||||||||||||||||| ||| |||||||||||| || || |||||| || || Sbjct: 422 tttcgttccgaaaggcaatgaaaagagctattgaattaactgaacaaacagatacaaagg 481 Query: 436 gagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatcca 495 || | || || ||||||| || ||| ||| ||||||||||||||||||| ||||| | Sbjct: 482 gaattcaaatacaaattgcagggcgtatcgacggaaaagaaattgcacgtgtcgaatgga 541 Query: 496 ttaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatc 555 | | | || || |||| || |||||||| ||||||||||||||| |||| | |||| Sbjct: 542 tcagagaaggtagggttcctctacaaacaattcgcgctaaaattgatcattgttcctata 601 Query: 556 caattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaa 614 |||||||||||||| ||||||||||||| |||||||||||||||| || || |||||| Sbjct: 602 caattcgaactatccatggagtattaggcctaaaaatttggatatttgtggatgaagaa 660 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 153 atagaaattcaaaaagaaatcgatacgatccacgtcataatccatattggattcccaaat 212 ||||||||||||||| ||||||| |||||| ||||||||| ||||||| ||||||||| Sbjct: 193 atagaaattcaaaaaagaatcgatttgatccaagtcataatctatattgggttcccaaat 252 Query: 213 ttattaa 219 ||||||| Sbjct: 253 ttattaa 259
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 180 bits (91), Expect = 4e-42 Identities = 142/159 (89%) Strand = Plus / Minus Query: 507 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 566 ||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 9414579 agacttcccctacaaacaattcgcgctaaaattgattattgctgctatccaatctgaact 9414520 Query: 567 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 626 ||||||||||||||||| || |||||||||||||||||||| ||| |||||| || | || Sbjct: 9414519 atctatggagtattaggagttaaaatttggatattcgtagatgaataataaccaaccctg 9414460 Query: 627 tcttcgaattctgtccattgatagaataaaaaatgacaa 665 |||| ||||||| || | ||||||||||||||||||| Sbjct: 9414459 tctttccattctgttcagtaatagaataaaaaatgacaa 9414421
>dbj|AP004683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0006C08 Length = 151987 Score = 180 bits (91), Expect = 4e-42 Identities = 142/159 (89%) Strand = Plus / Minus Query: 507 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 566 ||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 28140 agacttcccctacaaacaattcgcgctaaaattgattattgctgctatccaatctgaact 28081 Query: 567 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 626 ||||||||||||||||| || |||||||||||||||||||| ||| |||||| || | || Sbjct: 28080 atctatggagtattaggagttaaaatttggatattcgtagatgaataataaccaaccctg 28021 Query: 627 tcttcgaattctgtccattgatagaataaaaaatgacaa 665 |||| ||||||| || | ||||||||||||||||||| Sbjct: 28020 tctttccattctgttcagtaatagaataaaaaatgacaa 27982
>dbj|AP005924.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0011J03 Length = 176461 Score = 180 bits (91), Expect = 4e-42 Identities = 142/159 (89%) Strand = Plus / Minus Query: 507 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 566 ||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 174833 agacttcccctacaaacaattcgcgctaaaattgattattgctgctatccaatctgaact 174774 Query: 567 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 626 ||||||||||||||||| || |||||||||||||||||||| ||| |||||| || | || Sbjct: 174773 atctatggagtattaggagttaaaatttggatattcgtagatgaataataaccaaccctg 174714 Query: 627 tcttcgaattctgtccattgatagaataaaaaatgacaa 665 |||| ||||||| || | ||||||||||||||||||| Sbjct: 174713 tctttccattctgttcagtaatagaataaaaaatgacaa 174675
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 163 bits (82), Expect = 9e-37 Identities = 247/302 (81%) Strand = Plus / Minus Query: 316 aaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagag 375 |||||||| |||| ||||| ||||||||||||||||||||| |||||||| ||||||| Sbjct: 84232 aaccttatggacaacctaatattcttgcagaatatatagctcgacaattaaagaatagag 84173 Query: 376 tttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggg 435 |||| || ||||||||||||||||||| |||||||||||| || |||| || | || | Sbjct: 84172 tttcctttcgaaaggcaatgaaaaaagttattgaattaactgaacaagcggacacaaaag 84113 Query: 436 gagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatcca 495 || | |||| ||||||| || ||| ||| ||||||||||||||||||| ||||| | Sbjct: 84112 gaattcaagtgcaaattgcagggcgtatcgacggaaaagaaattgcacgtgtcgaatgga 84053 Query: 496 ttaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatc 555 | | | ||||| ||||||| ||||| || || |||||||||||| |||| | |||| Sbjct: 84052 tcagagaaggcagggttcccctacaaaccattcgagctaaaattgatcattgttcctata 83993 Query: 556 caattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaat 615 || ||||||| || ||||| ||||| || |||||||||||||||| ||||||||| ||| Sbjct: 83992 cagttcgaaccatatatggggtattgggcataaaaatttggatatttgtagacgaacaat 83933 Query: 616 aa 617 || Sbjct: 83932 aa 83931 Score = 69.9 bits (35), Expect = 1e-08 Identities = 71/83 (85%) Strand = Plus / Minus Query: 137 cgaagtaattacacatatagaaattcaaaaagaaatcgatacgatccacgtcataatcca 196 ||||| |||| | |||||||| ||||||||| |||| ||| |||||| ||||||||| Sbjct: 84417 cgaaggaattgcgcatatagagattcaaaaaaaaatggatctgatccaggtcataatctc 84358 Query: 197 tattggattcccaaatttattaa 219 |||||||||||||||||| |||| Sbjct: 84357 tattggattcccaaattttttaa 84335
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 163 bits (82), Expect = 9e-37 Identities = 247/302 (81%) Strand = Plus / Minus Query: 316 aaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagag 375 ||||||| |||| ||||| ||||| ||||||||||||||||| |||||||||||||||| Sbjct: 85220 aaccttacggacaacctaatattctcgcagaatatatagctttacaattaaaaaatagag 85161 Query: 376 tttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggg 435 | ||||| |||||||||||||||||||| |||||||||||| || || | | || || | Sbjct: 85160 tctcatttcgaaaggcaatgaaaaaagctattgaattaactgaacaaaccggtacaaaag 85101 Query: 436 gagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatcca 495 || | |||| ||||||| || ||| ||| |||||||| |||||||||| ||||| | Sbjct: 85100 gaattcaagtgcaaattgcaggacgtatcgacggaaaagagattgcacgtgtcgaatgga 85041 Query: 496 ttaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatc 555 | | | ||||| ||||||| |||||||| ||||||||||||||| | || | | || Sbjct: 85040 tcagagaaggcagggttcccctacaaacaattcgcgctaaaattgatcactgttcccata 84981 Query: 556 caattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaat 615 || || |||||||||||||| | |||||| | |||||||||||||| ||| || |||||| Sbjct: 84980 cagttagaactatctatggaatcttaggtatcaaaatttggatatttgtaaaccaagaat 84921 Query: 616 aa 617 || Sbjct: 84920 aa 84919
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 159 bits (80), Expect = 1e-35 Identities = 236/288 (81%) Strand = Plus / Minus Query: 330 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 389 ||||| ||||||||||||| ||||||| |||||||| |||||||||||||| ||||| Sbjct: 85776 cctaatattcttgcagaatttatagctggacaattaaagaatagagtttcatttcgaaaa 85717 Query: 390 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 449 ||||||||||| || ||||||||||| || ||||||||| || ||| | || || || Sbjct: 85716 gcaatgaaaaaggctattgaattaacagaacaagcagatacaaaaggaattcaaatacaa 85657 Query: 450 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 509 |||||||| ||| ||| ||||||||||||||||||| ||||| || | | || || Sbjct: 85656 attgcggggcgtatcgacggaaaagaaattgcacgtgtcgaatggatcagagaaggtagg 85597 Query: 510 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 569 ||||||| ||||| || || |||||||||||||||||| ||| || ||||||||||| Sbjct: 85596 gttcccctacaaacgattcgagctaaaattgattattgcgcttatacagttcgaactatc 85537 Query: 570 tatggagtattaggtgtaaaaatttggatattcgtagacgaagaataa 617 ||||||||||| || | |||||||||||||| ||||||| |||||| Sbjct: 85536 tatggagtattgggcatcaaaatttggatatttctagacgaggaataa 85489 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 143 aattacacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattgg 202 |||| ||| |||||| ||||||||| ||||||| |||||| ||||||||| ||| || Sbjct: 85969 aattgcacgtatagagattcaaaaaagaatcgatctgatccaggtcataatctttatggg 85910 Query: 203 attcccaaatttattaa 219 ||||||||| ||||||| Sbjct: 85909 attcccaaaattattaa 85893
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 159 bits (80), Expect = 1e-35 Identities = 236/288 (81%) Strand = Plus / Minus Query: 330 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 389 ||||| ||||||||||||| ||||||| |||||||| |||||||||||||| ||||| Sbjct: 84654 cctaatattcttgcagaatttatagctggacaattaaagaatagagtttcatttcgaaaa 84595 Query: 390 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 449 ||||||||||| || ||||||||||| || |||| |||| || ||| | || || || Sbjct: 84594 gcaatgaaaaaggctattgaattaacagaacaagcggatacaaaaggaattcaaatacaa 84535 Query: 450 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 509 |||||||| ||| ||| ||||||||||||||||||| ||||| || | | ||||| Sbjct: 84534 attgcggggcgtatcgacggaaaagaaattgcacgtgtcgaatggatcagagaaggcagg 84475 Query: 510 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 569 ||||||| ||||| || || ||||||||||||||||||| ||| || ||||||||||| Sbjct: 84474 gttcccctacaaacgattcgagctaaaattgattattgctcttatacagttcgaactatc 84415 Query: 570 tatggagtattaggtgtaaaaatttggatattcgtagacgaagaataa 617 |||||| |||| || | |||||||||||||| ||||||| |||||| Sbjct: 84414 tatggaatattgggcatcaaaatttggatatttctagacgaggaataa 84367 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 143 aattacacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattgg 202 |||| ||| |||||| ||||||||| ||||||| |||||| ||||||||| ||| || Sbjct: 84847 aattgcacgtatagagattcaaaaaagaatcgatctgatccaggtcataatctttatggg 84788 Query: 203 attcccaaatttattaa 219 ||||||||| ||||||| Sbjct: 84787 attcccaaaattattaa 84771
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 159 bits (80), Expect = 1e-35 Identities = 236/288 (81%) Strand = Plus / Minus Query: 330 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 389 ||||| ||||||||||||| ||||||| |||||||| |||||||||||||| ||||| Sbjct: 84818 cctaatattcttgcagaatttatagctggacaattaaagaatagagtttcatttcgaaaa 84759 Query: 390 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 449 ||||||||||| || ||||||||||| || |||| |||| || ||| | || || || Sbjct: 84758 gcaatgaaaaaggctattgaattaacagaacaagcggatacaaaaggaattcaaatacaa 84699 Query: 450 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 509 |||||||| ||| ||| ||||||||||||||||||| ||||| || | | ||||| Sbjct: 84698 attgcggggcgtatcgacggaaaagaaattgcacgtgtcgaatggatcagagaaggcagg 84639 Query: 510 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 569 ||||||| ||||| || || ||||||||||||||||||| ||| || ||||||||||| Sbjct: 84638 gttcccctacaaacgattcgagctaaaattgattattgctcttatacagttcgaactatc 84579 Query: 570 tatggagtattaggtgtaaaaatttggatattcgtagacgaagaataa 617 |||||| |||| || | |||||||||||||| ||||||| |||||| Sbjct: 84578 tatggaatattgggcatcaaaatttggatatttctagacgaggaataa 84531 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 143 aattacacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattgg 202 |||| ||| |||||| ||||||||| ||||||| |||||| ||||||||| ||| || Sbjct: 85011 aattgcacgtatagagattcaaaaaagaatcgatctgatccaggtcataatctttatggg 84952 Query: 203 attcccaaatttattaa 219 ||||||||| ||||||| Sbjct: 84951 attcccaaaattattaa 84935
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 159 bits (80), Expect = 1e-35 Identities = 236/288 (81%) Strand = Plus / Minus Query: 330 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 389 ||||| ||||||||||||| ||||||| |||||||| |||||||||||||| ||||| Sbjct: 84815 cctaatattcttgcagaatttatagctggacaattaaagaatagagtttcatttcgaaaa 84756 Query: 390 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 449 ||||||||||| || ||||||||||| || |||| |||| || ||| | || || || Sbjct: 84755 gcaatgaaaaaggctattgaattaacagaacaagcggatacaaaaggaattcaaatacaa 84696 Query: 450 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 509 |||||||| ||| ||| ||||||||||||||||||| ||||| || | | ||||| Sbjct: 84695 attgcggggcgtatcgacggaaaagaaattgcacgtgtcgaatggatcagagaaggcagg 84636 Query: 510 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 569 ||||||| ||||| || || ||||||||||||||||||| ||| || ||||||||||| Sbjct: 84635 gttcccctacaaacgattcgagctaaaattgattattgctcttatacagttcgaactatc 84576 Query: 570 tatggagtattaggtgtaaaaatttggatattcgtagacgaagaataa 617 |||||| |||| || | |||||||||||||| ||||||| |||||| Sbjct: 84575 tatggaatattgggcatcaaaatttggatatttctagacgaggaataa 84528 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 143 aattacacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattgg 202 |||| ||| |||||| ||||||||| ||||||| |||||| ||||||||| ||| || Sbjct: 85008 aattgcacgtatagagattcaaaaaagaatcgatctgatccaggtcataatctttatggg 84949 Query: 203 attcccaaatttattaa 219 ||||||||| ||||||| Sbjct: 84948 attcccaaaattattaa 84932
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 159 bits (80), Expect = 1e-35 Identities = 236/288 (81%) Strand = Plus / Minus Query: 330 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 389 ||||| ||||||||||||| ||||||| |||||||| |||||||||||||| ||||| Sbjct: 84701 cctaatattcttgcagaatttatagctggacaattaaagaatagagtttcatttcgaaaa 84642 Query: 390 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 449 ||||||||||| || ||||||||||| || |||| |||| || ||| | || || || Sbjct: 84641 gcaatgaaaaaggctattgaattaacagaacaagcggatacaaaaggaattcaaatacaa 84582 Query: 450 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 509 |||||||| ||| ||| ||||||||||||||||||| ||||| || | | ||||| Sbjct: 84581 attgcggggcgtatcgacggaaaagaaattgcacgtgtcgaatggatcagagaaggcagg 84522 Query: 510 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 569 ||||||| ||||| || || ||||||||||||||||||| ||| || ||||||||||| Sbjct: 84521 gttcccctacaaacgattcgagctaaaattgattattgctcttatacagttcgaactatc 84462 Query: 570 tatggagtattaggtgtaaaaatttggatattcgtagacgaagaataa 617 |||||| |||| || | |||||||||||||| ||||||| |||||| Sbjct: 84461 tatggaatattgggcatcaaaatttggatatttctagacgaggaataa 84414 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 143 aattacacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattgg 202 |||| ||| |||||| ||||||||| ||||||| |||||| ||||||||| ||| || Sbjct: 84894 aattgcacgtatagagattcaaaaaagaatcgatctgatccaggtcataatctttatggg 84835 Query: 203 attcccaaatttattaa 219 ||||||||| ||||||| Sbjct: 84834 attcccaaaattattaa 84818
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 159 bits (80), Expect = 1e-35 Identities = 236/288 (81%) Strand = Plus / Minus Query: 330 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 389 ||||| ||||||||||||| ||||||| |||||||| |||||||||||||| ||||| Sbjct: 84666 cctaatattcttgcagaatttatagctggacaattaaagaatagagtttcatttcgaaaa 84607 Query: 390 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 449 ||||||||||| || ||||||||||| || |||| |||| || ||| | || || || Sbjct: 84606 gcaatgaaaaaggctattgaattaacagaacaagcggatacaaaaggaattcaaatacaa 84547 Query: 450 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 509 |||||||| ||| ||| ||||||||||||||||||| ||||| || | | ||||| Sbjct: 84546 attgcggggcgtatcgacggaaaagaaattgcacgtgtcgaatggatcagagaaggcagg 84487 Query: 510 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 569 ||||||| ||||| || || ||||||||||||||||||| ||| || ||||||||||| Sbjct: 84486 gttcccctacaaacgattcgagctaaaattgattattgctcttatacagttcgaactatc 84427 Query: 570 tatggagtattaggtgtaaaaatttggatattcgtagacgaagaataa 617 |||||| |||| || | |||||||||||||| ||||||| |||||| Sbjct: 84426 tatggaatattgggcatcaaaatttggatatttctagacgaggaataa 84379 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 143 aattacacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattgg 202 |||| ||| |||||| ||||||||| ||||||| |||||| ||||||||| ||| || Sbjct: 84859 aattgcacgtatagagattcaaaaaagaatcgatctgatccaggtcataatctttatggg 84800 Query: 203 attcccaaatttattaa 219 ||||||||| ||||||| Sbjct: 84799 attcccaaaattattaa 84783
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 155 bits (78), Expect = 2e-34 Identities = 246/302 (81%) Strand = Plus / Minus Query: 316 aaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagag 375 |||||||| || | ||||| ||||||||||||| ||||||| |||||||| ||||||| Sbjct: 85543 aaccttatggaaaccctaatattcttgcagaatttatagctggacaattaaagaatagag 85484 Query: 376 tttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggg 435 |||| || ||||| ||||||||||| || ||||||||||| || ||||||||| || | Sbjct: 85483 tttcctttcgaaaagcaatgaaaaaggctattgaattaacagaacaagcagatacaaaag 85424 Query: 436 gagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatcca 495 || | || || |||||||||| ||| ||| ||||||||||||||||||| ||||| | Sbjct: 85423 gaattcaaatacaaattgcggggcgtatcgacggaaaagaaattgcacgtgtcgaatgga 85364 Query: 496 ttaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatc 555 | | | || || ||||||| ||||| || || || |||||||||||||||| ||| Sbjct: 85363 tcagagaaggtagggttcccctacaaacgattcgagcgaaaattgattattgctcttata 85304 Query: 556 caattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaat 615 || |||||||||||||||||||||| || | |||||||||||||| ||||||| |||| Sbjct: 85303 cagttcgaactatctatggagtattgggcatcaaaatttggatatttctagacgaggaat 85244 Query: 616 aa 617 || Sbjct: 85243 aa 85242 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 143 aattacacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattgg 202 |||| ||| |||||| ||||||||| ||||||| |||||| ||||||||| ||| || Sbjct: 85722 aattgcacgtatagagattcaaaaaagaatcgatctgatccaggtcataatctttatggg 85663 Query: 203 attcccaaatttattaa 219 ||||||||| ||||||| Sbjct: 85662 attcccaaaattattaa 85646
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 155 bits (78), Expect = 2e-34 Identities = 246/302 (81%) Strand = Plus / Minus Query: 316 aaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagag 375 |||||||| || | ||||| ||||||||||||| ||||||| |||||||| ||||||| Sbjct: 85541 aaccttatggaaaccctaatattcttgcagaatttatagctggacaattaaagaatagag 85482 Query: 376 tttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggg 435 |||| || ||||| ||||||||||| || ||||||||||| || ||||||||| || | Sbjct: 85481 tttcctttcgaaaagcaatgaaaaaggctattgaattaacagaacaagcagatacaaaag 85422 Query: 436 gagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatcca 495 || | || || |||||||||| ||| ||| ||||||||||||||||||| ||||| | Sbjct: 85421 gaattcaaatacaaattgcggggcgtatcgacggaaaagaaattgcacgtgtcgaatgga 85362 Query: 496 ttaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatc 555 | | | || || ||||||| ||||| || || || |||||||||||||||| ||| Sbjct: 85361 tcagagaaggtagggttcccctacaaacgattcgagcgaaaattgattattgctcttata 85302 Query: 556 caattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaat 615 || |||||||||||||||||||||| || | |||||||||||||| ||||||| |||| Sbjct: 85301 cagttcgaactatctatggagtattgggcatcaaaatttggatatttctagacgaggaat 85242 Query: 616 aa 617 || Sbjct: 85241 aa 85240 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 143 aattacacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattgg 202 |||| ||| |||||| ||||||||| ||||||| |||||| ||||||||| ||| || Sbjct: 85720 aattgcacgtatagagattcaaaaaagaatcgatctgatccaggtcataatctttatggg 85661 Query: 203 attcccaaatttattaa 219 ||||||||| ||||||| Sbjct: 85660 attcccaaaattattaa 85644
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 151 bits (76), Expect = 3e-33 Identities = 235/288 (81%) Strand = Plus / Minus Query: 330 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 389 ||||| ||||||||||||| ||||||| ||||||||||||| | ||||| || ||||| Sbjct: 82216 cctaatattcttgcagaatttatagctggccaattaaaaaatcgcgtttcttttcgaaaa 82157 Query: 390 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 449 |||||||||||||| |||||||||||| || | || ||| || ||| | ||||| || Sbjct: 82156 gcaatgaaaaaagctattgaattaactgaacaggcgaatacaaaaggaattcaagtacaa 82097 Query: 450 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 509 ||||| || ||| ||| ||||||||||||||||||| |||| || | | |||||| Sbjct: 82096 attgcaggacgtatcgacggaaaagaaattgcacgtgttgaatggatcagagaaggcaga 82037 Query: 510 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 569 |||| | |||||||| ||||||||||||||||| | |||| || |||||||||| Sbjct: 82036 gttcctttacaaacaattgaagctaaaattgattattgttcctatacagttcgaactatt 81977 Query: 570 tatggagtattaggtgtaaaaatttggatattcgtagacgaagaataa 617 ||||| || ||||| |||||||||||||||||||||||||||||||| Sbjct: 81976 tatggggttttaggaataaaaatttggatattcgtagacgaagaataa 81929
>gb|DQ069459.1| Nuphar advena ribosomal protein S3 (rps3) gene, partial cds; chloroplast Length = 654 Score = 143 bits (72), Expect = 8e-31 Identities = 222/272 (81%) Strand = Plus / Plus Query: 330 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 389 ||||| ||||||||||||||||| ||| | |||||||| ||||||||||| || |||||| Sbjct: 370 cctaatattcttgcagaatatatcgctctgcaattaaagaatagagtttcctttcgaaag 429 Query: 390 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 449 |||||||||||||| ||||||||| || || |||||||| || |||| | | ||| || Sbjct: 430 gcaatgaaaaaagctattgaattagctgaacaagcagatgcaaagggaattcaggtacaa 489 Query: 450 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 509 ||||| || |||||| ||||| |||||||| || | |||| |||| | ||| || Sbjct: 490 attgcaggacgtctcaacggaaacgaaattgcccgcgttgaatggattagagagggtagg 549 Query: 510 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 569 ||||||| || || || || | |||||||||| |||| | ||||||| ||||||||||| Sbjct: 550 gttcccctacagaccattcgagttaaaattgatcattgttcctatccagttcgaactatc 609 Query: 570 tatggagtattaggtgtaaaaatttggatatt 601 |||||||||||||| | |||||||||||||| Sbjct: 610 tatggagtattagggatcaaaatttggatatt 641 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 179 gatccacgtcataatccatattggattc 206 |||||| |||||||| |||||||||||| Sbjct: 213 gatccaagtcataattcatattggattc 240
>gb|AF536225.1| Vigna angularis chloroplast S10B operon, partial sequence Length = 6550 Score = 141 bits (71), Expect = 3e-30 Identities = 230/283 (81%) Strand = Plus / Plus Query: 319 cttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagagttt 378 |||||| ||| ||||| ||||||||||||| ||||||| |||||||| |||||||||| Sbjct: 3538 cttataaacaccctaatattcttgcagaatttatagctggacaattaaagaatagagttt 3597 Query: 379 cattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggag 438 |||| || || |||||||||||||| |||||||||||| || |||||| || || |||| Sbjct: 3598 catttcgtaaagcaatgaaaaaagctattgaattaactgaacaagcaggtacaaaaggag 3657 Query: 439 taaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccatta 498 | ||||| | ||||| || ||| | | ||||||||||||||||||| ||||| |||| Sbjct: 3658 ttcaagtacagattgcaggacgtattgatggaaaagaaattgcacgtgtcgaatggatta 3717 Query: 499 aaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaa 558 | || || |||| || ||||| || || ||||||||||| ||||| || ||| || Sbjct: 3718 gagaaggtagggttcctctacaaaccattcgagctaaaattgaatattgttgttatacag 3777 Query: 559 ttcgaactatctatggagtattaggtgtaaaaatttggatatt 601 |||||||||| |||||||| ||||| ||||| |||||||||| Sbjct: 3778 ttcgaactatttatggagttttagggataaaagtttggatatt 3820
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 139 bits (70), Expect = 1e-29 Identities = 244/302 (80%) Strand = Plus / Minus Query: 316 aaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagag 375 ||||||| |||| ||||| ||||||||||||| |||||| ||||||| ||||||| Sbjct: 87981 aaccttacggacatcctaatattcttgcagaatttatagccggacaattaaggaatagag 87922 Query: 376 tttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggg 435 |||| || || |||||||| |||||||| |||||||||||| || | ||||||| || | Sbjct: 87921 tttcgtttcgcaaggcaataaaaaaagctattgaattaactgaacaggcagatacaaaag 87862 Query: 436 gagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatcca 495 || | ||||| ||||||| || ||| ||| ||||||||||||||||||| |||| | Sbjct: 87861 gaattcaagtacaaattgcagggcgtatcgacggaaaagaaattgcacgtgttgaatgga 87802 Query: 496 ttaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatc 555 ||| | || || ||||||| ||||| || || ||||||||||||||||| | |||| Sbjct: 87801 ttagagaaggaagggttcccctacaaaccattcgagctaaaattgattattgttcctata 87742 Query: 556 caattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaat 615 | |||||||||| ||||| |||||||| | |||||||||||||| |||||||| |||| Sbjct: 87741 gagttcgaactatatatggggtattaggcatcaaaatttggatatttgtagacgaggaat 87682 Query: 616 aa 617 || Sbjct: 87681 aa 87680 Score = 56.0 bits (28), Expect = 2e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 143 aattacacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattgg 202 |||| ||| |||||| ||||||||| ||||||| ||| || ||||||||| |||| || Sbjct: 88160 aattgcacgtatagagattcaaaaaagaatcgatctgattcaggtcataatctatatggg 88101 Query: 203 attcccaaatttatta 218 ||||||||| |||||| Sbjct: 88100 attcccaaagttatta 88085
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 139 bits (70), Expect = 1e-29 Identities = 229/282 (81%) Strand = Plus / Minus Query: 336 attcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaaggcaatg 395 |||||||| |||||||||||||| ||| |||||||||||||||| || ||||| |||||| Sbjct: 82736 attcttgctgaatatatagctttacaactaaaaaatagagtttcgtttcgaaaagcaatg 82677 Query: 396 aaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaaattgcg 455 |||||||| |||||||| ||| || ||||||||| || ||| | || | |||| || Sbjct: 82676 aaaaaagctattgaattgactgaacaagcagatacaaaaggaattcaaattcaaatcgca 82617 Query: 456 ggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcagacttccc 515 || ||| ||| ||||||||||||||||||| ||||| || | | || || ||||| Sbjct: 82616 ggacgtatcgatggaaaagaaattgcacgtgtcgaatggataagagaaggtagggttccc 82557 Query: 516 ctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatctatgga 575 || ||||| || || |||||||||||| |||| | | || | ||| |||||||||||| Sbjct: 82556 ctacaaaccattcgagctaaaattgatcattgtttccataaagttcaaactatctatggg 82497 Query: 576 gtattaggtgtaaaaatttggatattcgtagacgaagaataa 617 |||||||| |||||||||||||||| |||||||| |||||| Sbjct: 82496 gtattaggcataaaaatttggatatttgtagacgaggaataa 82455 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 152 tatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattggattcccaaa 211 |||||||||| ||||| ||||||| |||||| ||||||||| |||| ||||||||||| Sbjct: 82926 tatagaaattaaaaaaagaatcgatctgatccaggtcataatctatatcggattcccaaa 82867 Query: 212 tttatt 217 |||||| Sbjct: 82866 tttatt 82861
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 139 bits (70), Expect = 1e-29 Identities = 232/286 (81%) Strand = Plus / Minus Query: 316 aaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagag 375 |||||||| || | ||||| ||||||||||||| ||||||| |||||||| ||||||| Sbjct: 85312 aaccttatggaaaccctaatattcttgcagaatttatagctggacaattaaagaatagag 85253 Query: 376 tttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggg 435 |||| || ||||| ||||||||||| || ||||||||||| || ||||||||| || | Sbjct: 85252 tttcctttcgaaaagcaatgaaaaaggctattgaattaacagaacaagcagatacaaaag 85193 Query: 436 gagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatcca 495 || | || || |||||||||| ||| ||| ||||||||||||||||||| |||| | Sbjct: 85192 gaattcaaatacaaattgcggggcgtatcgacggaaaagaaattgcacgtgttgaatgga 85133 Query: 496 ttaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatc 555 | | | || || ||||||| ||||| || || || |||||||||||||||| ||| Sbjct: 85132 tcagagaaggtagggttcccctacaaacgattcgagcgaaaattgattattgctcttata 85073 Query: 556 caattcgaactatctatggagtattaggtgtaaaaatttggatatt 601 || |||||||||||||||||||||| || | |||||||||||||| Sbjct: 85072 cagttcgaactatctatggagtattgggcatcaaaatttggatatt 85027 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 143 aattacacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattgg 202 |||| ||| |||||||||| ||||| ||||||| |||||| ||||||||| ||| || Sbjct: 85491 aattgcacgtatagaaattaaaaaaagaatcgatctgatccaggtcataatctttatggg 85432 Query: 203 attcccaaatttattaa 219 ||||||||| ||||||| Sbjct: 85431 attcccaaaattattaa 85415
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 135 bits (68), Expect = 2e-28 Identities = 233/288 (80%) Strand = Plus / Minus Query: 330 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 389 ||||| ||||||||||||| ||| ||| |||||||||||| | ||||| || ||||| Sbjct: 83113 cctaatattcttgcagaatttatcgctggacaattaaaaaatcgcgtttcttttcgaaaa 83054 Query: 390 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 449 |||||||||||||| |||||||||||| || | || ||| || ||| | ||||| || Sbjct: 83053 gcaatgaaaaaagctattgaattaactgaacaggcgaatacaaaaggaattcaagtacaa 82994 Query: 450 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 509 ||||| || ||| ||| ||||||||||||||||||| |||| || | | |||||| Sbjct: 82993 attgcaggacgtatcgacggaaaagaaattgcacgtgttgaatggatcagagaaggcaga 82934 Query: 510 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 569 |||| | |||||||| ||||||||||||||||| | |||| || |||||||||| Sbjct: 82933 gttcctttacaaacaattgaagctaaaattgattattgttcctatacagttcgaactatt 82874 Query: 570 tatggagtattaggtgtaaaaatttggatattcgtagacgaagaataa 617 ||||| || ||||| |||||||||||||||||||||||||||||||| Sbjct: 82873 tatggggttttaggaataaaaatttggatattcgtagacgaagaataa 82826
>gb|DQ069457.1| Acorus americanus ribosomal protein S3 (rps3) gene, partial cds; chloroplast Length = 654 Score = 133 bits (67), Expect = 8e-28 Identities = 223/275 (81%) Strand = Plus / Plus Query: 336 attcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaaggcaatg 395 |||||||| |||||||||||||| ||| |||||||||||||||| || ||||| |||||| Sbjct: 376 attcttgctgaatatatagctttacaactaaaaaatagagtttcgtttcgaaaagcaatg 435 Query: 396 aaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaaattgcg 455 |||||||| |||||||| ||| || ||||||||| || ||| | || | |||| || Sbjct: 436 aaaaaagctattgaattgactgaacaagcagatacaaaaggaattcaaattcaaatcgca 495 Query: 456 ggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcagacttccc 515 || ||| ||| ||||||||||||||||||| ||||| || | | || || ||||| Sbjct: 496 ggacgtatcgatggaaaagaaattgcacgtgtcgaatggataagagaaggtagggttccc 555 Query: 516 ctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatctatgga 575 || ||||| || || |||||||||||| |||| | | || | ||| |||||||||||| Sbjct: 556 ctacaaaccattcgagctaaaattgatcattgtttccataaagttcaaactatctatggg 615 Query: 576 gtattaggtgtaaaaatttggatattcgtagacga 610 |||||||| |||||||||||||||| |||||||| Sbjct: 616 gtattaggcataaaaatttggatatttgtagacga 650 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 152 tatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattggattcccaaa 211 |||||||||| ||||| ||||||| |||||| ||||||||| |||| ||||||||||| Sbjct: 186 tatagaaattaaaaaaagaatcgatctgatccaggtcataatctatatcggattcccaaa 245 Query: 212 tttatt 217 |||||| Sbjct: 246 tttatt 251
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 133 bits (67), Expect = 8e-28 Identities = 97/107 (90%) Strand = Plus / Plus Query: 559 ttcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataac 618 ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 23179707 ttcgaactatctatggagtattaggagttaaaatttggatattcgtagacgaagaataac 23179766 Query: 619 taatcttgtcttcgaattctgtccattgatagaataaaaaatgacaa 665 || | ||||||| ||||||| || | ||||||||||||||||||| Sbjct: 23179767 caaccctgtcttcccattctgttcagtaatagaataaaaaatgacaa 23179813 Score = 44.1 bits (22), Expect = 0.58 Identities = 80/98 (81%), Gaps = 1/98 (1%) Strand = Plus / Plus Query: 429 ataaggggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgcc 488 |||| |||||| |||||||||||||| | | ||||| || |||||||||| | |||| | Sbjct: 28024386 ataaagggagttaaagtaaaaattgcatgccatctcgtagaaaaagaaattacgcgtgtc 28024445 Query: 489 gaatccattaaaaggggcagacttcccctccaaacaat 526 |||| ||| |||| || ||||||| |||| ||||||| Sbjct: 28024446 gaatacatgaaaa-aggtagacttcacctctaaacaat 28024482
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 133 bits (67), Expect = 8e-28 Identities = 97/107 (90%) Strand = Plus / Plus Query: 559 ttcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataac 618 ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 130355 ttcgaactatctatggagtattaggagttaaaatttggatattcgtagacgaagaataac 130414 Query: 619 taatcttgtcttcgaattctgtccattgatagaataaaaaatgacaa 665 || | ||||||| ||||||| || | ||||||||||||||||||| Sbjct: 130415 caaccctgtcttcccattctgttcagtaatagaataaaaaatgacaa 130461
>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0642B07 Length = 139297 Score = 133 bits (67), Expect = 8e-28 Identities = 97/107 (90%) Strand = Plus / Plus Query: 559 ttcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataac 618 ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 14469 ttcgaactatctatggagtattaggagttaaaatttggatattcgtagacgaagaataac 14528 Query: 619 taatcttgtcttcgaattctgtccattgatagaataaaaaatgacaa 665 || | ||||||| ||||||| || | ||||||||||||||||||| Sbjct: 14529 caaccctgtcttcccattctgttcagtaatagaataaaaaatgacaa 14575
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 127 bits (64), Expect = 5e-26 Identities = 220/272 (80%) Strand = Plus / Minus Query: 330 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 389 ||||| ||||||||||||| |||||| ||||||||||||||||||||| || || || Sbjct: 82993 cctaatattcttgcagaatttatagcgggccaattaaaaaatagagtttcttttcgcaaa 82934 Query: 390 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 449 ||||||||||| || || ||||||||| || ||||||||| || ||| | |||| || Sbjct: 82933 gcaatgaaaaaggctatagaattaactgaacaagcagatacaaaaggaattcaagtgcaa 82874 Query: 450 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 509 ||||| || ||| ||| |||||||||||||| |||| |||| || | | ||| || Sbjct: 82873 attgcaggacgtatcgacggaaaagaaattgcgcgtgttgaatggatcagagaggggagg 82814 Query: 510 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 569 |||| || ||||| || || ||||||||||||||||| |||||| || ||||||| ||| Sbjct: 82813 gttccactacaaaccattcgagctaaaattgattattgttgctatacagttcgaacgatc 82754 Query: 570 tatggagtattaggtgtaaaaatttggatatt 601 ||||| |||||||| | |||||||||||||| Sbjct: 82753 tatggggtattaggcatcaaaatttggatatt 82722
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 127 bits (64), Expect = 5e-26 Identities = 220/272 (80%) Strand = Plus / Minus Query: 330 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 389 ||||| ||||||||||||| |||||| ||||||||||||||||||||| || || || Sbjct: 82991 cctaatattcttgcagaatttatagcgggccaattaaaaaatagagtttcttttcgcaaa 82932 Query: 390 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 449 ||||||||||| || || ||||||||| || ||||||||| || ||| | |||| || Sbjct: 82931 gcaatgaaaaaggctatagaattaactgaacaagcagatacaaaaggaattcaagtgcaa 82872 Query: 450 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 509 ||||| || ||| ||| |||||||||||||| |||| |||| || | | ||| || Sbjct: 82871 attgcaggacgtatcgacggaaaagaaattgcgcgtgttgaatggatcagagaggggagg 82812 Query: 510 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 569 |||| || ||||| || || ||||||||||||||||| |||||| || ||||||| ||| Sbjct: 82811 gttccactacaaaccattcgagctaaaattgattattgttgctatacagttcgaacgatc 82752 Query: 570 tatggagtattaggtgtaaaaatttggatatt 601 ||||| |||||||| | |||||||||||||| Sbjct: 82751 tatggggtattaggcatcaaaatttggatatt 82720
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 119 bits (60), Expect = 1e-23 Identities = 231/288 (80%) Strand = Plus / Minus Query: 330 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 389 ||||| ||||||||||||||||| ||| | ||||||||||||||||||||||| ||||| Sbjct: 89740 cctaatattcttgcagaatatattgctctgcaattaaaaaatagagtttcatttcgaaaa 89681 Query: 390 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 449 |||||||||||||| ||||||||| || || ||||| ||| || ||| | ||| || Sbjct: 89680 gcaatgaaaaaagctattgaattagctgaacaagcaaatacaaaggggattcgggtacaa 89621 Query: 450 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 509 |||||||| ||||| |||||||| ||||| |||| ||||| || | | ||||| Sbjct: 89620 attgcggggcgtctgaacggaaaagagattgcccgtgtcgaatggatcagagaaggcagg 89561 Query: 510 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 569 ||||||| || || || || ||||||||||||||||| | ||| ||| ||||||| Sbjct: 89560 gttcccctacacactattcgagctaaaattgattattgttcttatatggttcaaactatc 89501 Query: 570 tatggagtattaggtgtaaaaatttggatattcgtagacgaagaataa 617 || || |||||||| | |||||||||||||| ||||| ||||||||| Sbjct: 89500 tacggggtattagggatcaaaatttggatatttgtagatgaagaataa 89453
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 119 bits (60), Expect = 1e-23 Identities = 219/272 (80%) Strand = Plus / Plus Query: 330 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 389 ||||| ||||||||||||| ||||||| |||||||| |||||| |||| || | || Sbjct: 42655 cctaatattcttgcagaatttatagctggacaattaaagaatagaatttcgtttaggaaa 42714 Query: 390 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 449 ||||| |||||||| ||||||||| || || | |||| || || ||||| ||||| || Sbjct: 42715 gcaatcaaaaaagctattgaattagctgaacaggcaggtacaaaaggagttcaagtacaa 42774 Query: 450 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 509 |||||||| ||| ||| ||||||||||||||||||| ||||| |||| | || || Sbjct: 42775 attgcgggacgtatcgacggaaaagaaattgcacgtgtcgaatggattagagaaggtagg 42834 Query: 510 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 569 |||| || ||||| || || ||||||||||||||||| | ||||||| |||||||||| Sbjct: 42835 gttcctctacaaaccattcgagctaaaattgattattgttcctatccagttcgaactatt 42894 Query: 570 tatggagtattaggtgtaaaaatttggatatt 601 ||||| |||||||| | ||| |||||||||| Sbjct: 42895 tatggggtattaggaatcaaagtttggatatt 42926
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 119 bits (60), Expect = 1e-23 Identities = 219/272 (80%) Strand = Plus / Minus Query: 330 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 389 ||||| |||||||| |||| |||||| ||||||||| |||||||||||||| ||||| Sbjct: 84969 cctaatattcttgcggaatttatagccggccaattaaagaatagagtttcatttcgaaaa 84910 Query: 390 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 449 ||||||||||| || ||||||||||| || ||||||||| || ||| | ||||| || Sbjct: 84909 gcaatgaaaaaggctattgaattaaccgaacaagcagatacaaaaggaattcaagtacaa 84850 Query: 450 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 509 ||||| || ||| ||| |||||||||||||| |||| |||| || | | || || Sbjct: 84849 attgcagggcgtatcgacggaaaagaaattgcgcgtgtggaatggatcagagaaggtagg 84790 Query: 510 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 569 ||||||| ||||| || || |||||||| |||||||| | |||| | |||||||||| Sbjct: 84789 gttcccctgcaaaccattcgagctaaaatcgattattgttcctatactgttcgaactatt 84730 Query: 570 tatggagtattaggtgtaaaaatttggatatt 601 |||||||||||||| | |||||||||||||| Sbjct: 84729 tatggagtattaggcatcaaaatttggatatt 84698 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 143 aattacacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccatattgg 202 |||| ||| |||||| ||||||||| ||||||| |||||| ||||||||| |||| || Sbjct: 85162 aattgcacgtatagagattcaaaaacgaatcgatctgatccaggtcataatctatatggg 85103 Query: 203 attcccaaatttattaa 219 ||||||||| ||||||| Sbjct: 85102 attcccaaagttattaa 85086
>gb|DQ069460.1| Ranunculus macranthus ribosomal protein S3 (rps3) gene, partial cds; chloroplast Length = 651 Score = 115 bits (58), Expect = 2e-22 Identities = 229/286 (80%) Strand = Plus / Plus Query: 316 aaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagag 375 |||||||| | || ||||| ||||||||||||| ||||||| |||||||| ||| ||| Sbjct: 353 aaccttatgggcaacctaatattcttgcagaatttatagctggacaattaaagaatcgag 412 Query: 376 tttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggg 435 ||||||| |||||||||||||||||||| |||||||||||| || | ||||||| || | Sbjct: 413 tttcatttcgaaaggcaatgaaaaaagctattgaattaactgaacaggcagatacaaaag 472 Query: 436 gagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatcca 495 || | || || ||||||| || ||| | | ||||||||||| ||||||| ||||| | Sbjct: 473 gaattcaaatacaaattgcagggcgtattgacggaaaagaaatagcacgtgtcgaatgga 532 Query: 496 ttaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatc 555 | | | || || ||||||| ||||| || || || |||||||||||||| | ||| Sbjct: 533 tcagagaaggtagggttcccctacaaaccattcgagccaaaattgattattgttcttata 592 Query: 556 caattcgaactatctatggagtattaggtgtaaaaatttggatatt 601 || |||||||||| ||||| | |||||| | |||||||||||||| Sbjct: 593 cagttcgaactatttatggggcattaggaatcaaaatttggatatt 638
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 113 bits (57), Expect = 8e-22 Identities = 216/269 (80%) Strand = Plus / Minus Query: 330 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 389 ||||| ||||||||||||| |||||| |||||||||||||||||||| || || || Sbjct: 82462 cctaatattcttgcagaatttatagccggacaattaaaaaatagagtttcttttcgcaaa 82403 Query: 390 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 449 ||||||||||| || || ||||||||| || ||||||||| || ||| | |||| || Sbjct: 82402 gcaatgaaaaaggctatagaattaactgaacaagcagatacaaaaggaattcaagtgcaa 82343 Query: 450 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 509 ||||| || ||| ||| |||||||||||||| |||| |||| || | | ||| || Sbjct: 82342 attgcaggacgtatcgacggaaaagaaattgcgcgtgttgaatggatcagagagggtagg 82283 Query: 510 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 569 |||| || ||||| || |||||||||||||||||||| | |||| || ||||||| ||| Sbjct: 82282 gttccactacaaaccattcgcgctaaaattgattattgttcctatacagttcgaacaatc 82223 Query: 570 tatggagtattaggtgtaaaaatttggat 598 ||||| |||||||| | ||||||||||| Sbjct: 82222 tatggggtattaggcatcaaaatttggat 82194
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 103 bits (52), Expect = 7e-19 Identities = 73/80 (91%) Strand = Plus / Minus Query: 531 gctaaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaa 590 ||||||||||||||||| ||||||||| |||||||||||||||| ||||||| ||||| Sbjct: 85236 gctaaaattgattattgttgctatccagttcgaactatctatgggatattaggcataaaa 85177 Query: 591 atttggatattcgtagacga 610 ||||||||||| |||||||| Sbjct: 85176 atttggatatttgtagacga 85157 Score = 93.7 bits (47), Expect = 7e-16 Identities = 143/175 (81%) Strand = Plus / Minus Query: 318 ccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagagtt 377 |||||| |||| ||||| ||||| ||||||| |||||| |||||||| ||||||||| Sbjct: 85449 ccttatggacaccctaatattctcgcagaatttatagccggacaattaaagaatagagtt 85390 Query: 378 tcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataagggga 437 ||||| || || |||||||||||||| |||||||||||| || | || | || || |||| Sbjct: 85389 tcatttcgcaaagcaatgaaaaaagctattgaattaactgaacaggcgggtacaaaggga 85330 Query: 438 gtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaat 492 | ||||| ||||||| || ||| | | ||||||||||||||||||| ||||| Sbjct: 85329 attcaagtacaaattgccggacgtatagacggaaaagaaattgcacgtgtcgaat 85275
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 103 bits (52), Expect = 7e-19 Identities = 76/84 (90%) Strand = Plus / Minus Query: 330 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 389 ||||| ||||||||||||||||| ||| | |||||||| ||||||||||| || |||||| Sbjct: 88763 cctaatattcttgcagaatatatcgctctgcaattaaagaatagagtttcctttcgaaag 88704 Query: 390 gcaatgaaaaaagccattgaatta 413 |||||||||||||| ||||||||| Sbjct: 88703 gcaatgaaaaaagctattgaatta 88680 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Minus Query: 533 taaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaaat 592 |||||||||| |||| | ||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 88560 taaaattgatcattgttcctatccagttcgaactatctatggagtattagggataaaaat 88501 Query: 593 ttggatatt 601 ||||||||| Sbjct: 88500 ttggatatt 88492 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/69 (84%) Strand = Plus / Minus Query: 138 gaagtaattacacatatagaaattcaaaaagaaatcgatacgatccacgtcataatccat 197 |||| |||| ||| |||||| ||| ||||| ||||||| |||||| |||||||| ||| Sbjct: 88961 gaaggaattgcacgtatagatattaaaaaaagaatcgatttgatccaagtcataattcat 88902 Query: 198 attggattc 206 ||||||||| Sbjct: 88901 attggattc 88893
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 103 bits (52), Expect = 7e-19 Identities = 73/80 (91%) Strand = Plus / Minus Query: 531 gctaaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaa 590 ||||||||||||||||| ||||||||| |||||||||||||||| ||||||| ||||| Sbjct: 85465 gctaaaattgattattgttgctatccagttcgaactatctatgggatattaggcataaaa 85406 Query: 591 atttggatattcgtagacga 610 ||||||||||| |||||||| Sbjct: 85405 atttggatatttgtagacga 85386 Score = 93.7 bits (47), Expect = 7e-16 Identities = 143/175 (81%) Strand = Plus / Minus Query: 318 ccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagagtt 377 |||||| |||| ||||| ||||| ||||||| |||||| |||||||| ||||||||| Sbjct: 85678 ccttatggacaccctaatattctcgcagaatttatagccggacaattaaagaatagagtt 85619 Query: 378 tcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataagggga 437 ||||| || || |||||||||||||| |||||||||||| || | || | || || |||| Sbjct: 85618 tcatttcgcaaagcaatgaaaaaagctattgaattaactgaacaggcgggtacaaaggga 85559 Query: 438 gtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaat 492 | ||||| ||||||| || ||| | | ||||||||||||||||||| ||||| Sbjct: 85558 attcaagtacaaattgccggacgtatagacggaaaagaaattgcacgtgtcgaat 85504
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 101 bits (51), Expect = 3e-18 Identities = 225/283 (79%) Strand = Plus / Minus Query: 319 cttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagagttt 378 |||||| ||| ||||| ||| ||||||||| ||||||| |||||||| |||||||||| Sbjct: 82246 cttataaacaccctaatattattgcagaatttatagctggacaattaaagaatagagttt 82187 Query: 379 cattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggag 438 | || || || |||||||||||||| |||||||||||| || | || | || || |||| Sbjct: 82186 cgtttcgtaaagcaatgaaaaaagctattgaattaactgaacaggcgggtacaaaaggag 82127 Query: 439 taaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccatta 498 | ||||| ||||||| || ||| ||| ||||||||||||||||||| |||| || | Sbjct: 82126 ttcaagtacaaattgcaggacgtatcgacggaaaagaaattgcacgtgttgaatggatca 82067 Query: 499 aaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaa 558 | || ||| |||| || ||||| || || || ||||| |||||||| |||||| || Sbjct: 82066 gagaaggtagagttcctctacaaaccattcgagcgaaaatagattattgttgctatacag 82007 Query: 559 ttcgaactatctatggagtattaggtgtaaaaatttggatatt 601 |||||||||| ||||| || ||||| | ||| |||||||||| Sbjct: 82006 ttcgaactatttatggggttttagggatcaaagtttggatatt 81964
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 87.7 bits (44), Expect = 4e-14 Identities = 215/272 (79%) Strand = Plus / Minus Query: 330 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 389 ||||| ||||||||||||| |||||| || ||||| |||||||||||||| || || Sbjct: 87829 cctaatattcttgcagaatttatagccggacagttaaagaatagagtttcatttcgcaaa 87770 Query: 390 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 449 ||||| ||||| || ||||||||||| || | ||||||| || ||| | ||||| || Sbjct: 87769 gcaataaaaaaggctattgaattaaccgaacaggcagatacaaaaggaattcaagtacaa 87710 Query: 450 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 509 ||||| ||||| || | ||||||||||||||||||| ||||| || | | || || Sbjct: 87709 attgcaggtcgcctggacggaaaagaaattgcacgtgtcgaatggatgagagaaggtagg 87650 Query: 510 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 569 |||| || ||||| || || ||||||||||||||||| | |||| | | ||||| || Sbjct: 87649 gttcctctacaaaccattcgagctaaaattgattattgttcctatggagtccgaacggtc 87590 Query: 570 tatggagtattaggtgtaaaaatttggatatt 601 |||||||||||||| | |||||||||||||| Sbjct: 87589 tatggagtattaggcatcaaaatttggatatt 87558
>emb|AJ560717.1|OMI560717 Orobanche minor chloroplast rps19 gene (partial), rpl22 gene and rps3 gene (partial) Length = 1121 Score = 83.8 bits (42), Expect = 7e-13 Identities = 93/110 (84%) Strand = Plus / Plus Query: 316 aaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagag 375 ||||||||||| | || || ||| ||||||||| |||||| ||||||||| ||||||| Sbjct: 980 aaccttatagaaaccccaatattattgcagaatttatagccaaccaattaaataatagag 1039 Query: 376 tttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagca 425 ||||||| |||| ||||||||||| || |||||||||||| || ||||| Sbjct: 1040 tttcatttagaaaagcaatgaaaaaggctattgaattaactgaacaagca 1089
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 83.8 bits (42), Expect = 7e-13 Identities = 135/166 (81%) Strand = Plus / Minus Query: 319 cttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagagttt 378 |||||||| | ||||| ||||||||||||| ||||| ||||||||||||||||||| Sbjct: 80984 cttatagagatcctaatattcttgcagaattcatagccggacaattaaaaaatagagttt 80925 Query: 379 cattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggag 438 | || || || |||||||||||||| ||||| |||||| || | || | | || |||| Sbjct: 80924 cgtttcgtaaagcaatgaaaaaagctattgagttaactgaacaggcggggacaaaaggag 80865 Query: 439 taaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacg 484 | ||||| |||||||||| ||| ||| ||||||||||||||||| Sbjct: 80864 ttcaagtacaaattgcgggacgtatcgacggaaaagaaattgcacg 80819 Score = 69.9 bits (35), Expect = 1e-08 Identities = 77/91 (84%) Strand = Plus / Minus Query: 511 ttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatct 570 ||||||| ||||| || || ||||||||||||||||| | |||| || |||||||||| | Sbjct: 80792 ttcccctacaaaccattcgagctaaaattgattattgttcctatacagttcgaactattt 80733 Query: 571 atggagtattaggtgtaaaaatttggatatt 601 |||| |||||||| | ||| |||||||||| Sbjct: 80732 atggcgtattagggatcaaagtttggatatt 80702
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 79.8 bits (40), Expect = 1e-11 Identities = 85/100 (85%) Strand = Plus / Minus Query: 316 aaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagag 375 ||||||||||| | ||||| ||||||||||||| |||||| |||||||| ||||||| Sbjct: 19120 aaccttatagaaaccctaatattcttgcagaatttatagccgatcaattaaagaatagag 19061 Query: 376 tttcattccgaaaggcaatgaaaaaagccattgaattaac 415 |||| || |||| ||||||||||||| ||||||||||| Sbjct: 19060 tttcttttagaaaaacaatgaaaaaagctattgaattaac 19021
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 77.8 bits (39), Expect = 4e-11 Identities = 75/87 (86%) Strand = Plus / Minus Query: 330 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 389 ||||| |||||||| |||| |||||| |||||||| ||| |||||||||| |||||| Sbjct: 87582 cctaatattcttgccgaatttatagccggacaattaaagaatcgagtttcatttcgaaag 87523 Query: 390 gcaatgaaaaaagccattgaattaact 416 ||||||||||| || |||||||||||| Sbjct: 87522 gcaatgaaaaaggctattgaattaact 87496 Score = 71.9 bits (36), Expect = 3e-09 Identities = 72/84 (85%) Strand = Plus / Minus Query: 534 aaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaaatt 593 |||||||| ||||||| ||| | |||||||||||||||| |||||||| | |||||| Sbjct: 87378 aaaattgagtattgctcttatagagttcgaactatctatggggtattaggaatcaaaatt 87319 Query: 594 tggatattcgtagacgaagaataa 617 |||||||| |||||||||||||| Sbjct: 87318 tggatatttatagacgaagaataa 87295
>gb|AC153125.10| Medicago truncatula clone mth2-74f16, complete sequence Length = 128458 Score = 69.9 bits (35), Expect = 1e-08 Identities = 131/163 (80%) Strand = Plus / Minus Query: 330 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 389 ||||| ||||||||||||| ||||||| |||||||| |||||| ||||||| | || Sbjct: 26310 cctaatattcttgcagaatttatagctggacaattaaagaatagaatttcatttaggaaa 26251 Query: 390 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 449 ||||| |||||||| ||||||||| || || | || || || ||||| ||||| || Sbjct: 26250 gcaatcaaaaaagctattgaattagctgaacagacatgtacaaaaggagttcaagtacaa 26191 Query: 450 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaat 492 |||||||| ||| ||| ||||||||||||||| ||| ||||| Sbjct: 26190 attgcgggacgtatcgacggaaaagaaattgcatgtgtcgaat 26148
>emb|X13336.1|CHSORP Spinacia oleracea plastid genes rps3, rps19, rpl14, rpl16 and rpl22 for ribosomal proteins S3, S19, L14, L16 and L22 Length = 4102 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 137 cgaagtaattacacatatagaaattcaaaaagaaatcgatacgatccacgtcataatcca 196 ||||| |||| ||| ||| |||||||||||| ||||||| ||| || || |||||||| Sbjct: 1202 cgaaggaattgcacgtattgaaattcaaaaaagaatcgatctgatacaggtgataatcca 1261 Query: 197 tattggattcccaaatttattaa 219 ||| ||||||||||| ||||||| Sbjct: 1262 tatgggattcccaaaattattaa 1284 Score = 56.0 bits (28), Expect = 2e-04 Identities = 211/272 (77%) Strand = Plus / Plus Query: 330 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 389 ||||| ||||||||||||| |||||| ||| |||| | ||| || ||||| ||||| Sbjct: 1401 cctaatattcttgcagaatttatagccggacaactaaagagtagggtatcatttcgaaaa 1460 Query: 390 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 449 |||||||||||||| || |||||||| || |||| |||| || ||| | || | || Sbjct: 1461 gcaatgaaaaaagctatcgaattaaccgaacaagctgatacaaaaggaattcaaatccaa 1520 Query: 450 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 509 ||||| || ||| ||| |||||||||||||||||| ||||| || | | || || Sbjct: 1521 attgccggccgtatcgatggaaaagaaattgcacgtatcgaatggataagagaaggtagg 1580 Query: 510 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 569 ||||||| ||||| || ||||| ||||| |||||||| |||| | ||||||| ||| Sbjct: 1581 gttcccctacaaacgattcgcgcaaaaatcgattattgtgcctataccgttcgaacaatc 1640 Query: 570 tatggagtattaggtgtaaaaatttggatatt 601 ||||| ||||| || |||||||||||||||| Sbjct: 1641 tatggcgtattggggataaaaatttggatatt 1672
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 137 cgaagtaattacacatatagaaattcaaaaagaaatcgatacgatccacgtcataatcca 196 ||||| |||| ||| ||| |||||||||||| ||||||| ||| || || |||||||| Sbjct: 81740 cgaaggaattgcacgtattgaaattcaaaaaagaatcgatctgatacaggtgataatcca 81681 Query: 197 tattggattcccaaatttattaa 219 ||| ||||||||||| ||||||| Sbjct: 81680 tatgggattcccaaaattattaa 81658 Score = 56.0 bits (28), Expect = 2e-04 Identities = 211/272 (77%) Strand = Plus / Minus Query: 330 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 389 ||||| ||||||||||||| |||||| ||| |||| | ||| || ||||| ||||| Sbjct: 81541 cctaatattcttgcagaatttatagccggacaactaaagagtagggtatcatttcgaaaa 81482 Query: 390 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 449 |||||||||||||| || |||||||| || |||| |||| || ||| | || | || Sbjct: 81481 gcaatgaaaaaagctatcgaattaaccgaacaagctgatacaaaaggaattcaaatccaa 81422 Query: 450 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 509 ||||| || ||| ||| |||||||||||||||||| ||||| || | | || || Sbjct: 81421 attgccggccgtatcgatggaaaagaaattgcacgtatcgaatggataagagaaggtagg 81362 Query: 510 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 569 ||||||| ||||| || ||||| ||||| |||||||| |||| | ||||||| ||| Sbjct: 81361 gttcccctacaaacgattcgcgcaaaaatcgattattgtgcctataccgttcgaacaatc 81302 Query: 570 tatggagtattaggtgtaaaaatttggatatt 601 ||||| ||||| || |||||||||||||||| Sbjct: 81301 tatggcgtattggggataaaaatttggatatt 81270
>dbj|AB087104.1| Neonotonia wightii chloroplast DNA, rps3-rpl16 intergenic spacer, complete sequence, strain:O00002 Length = 301 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 531 gctaaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaa 590 ||||||||||||||||| |||||| || |||||||||| ||||| || ||||| | ||| Sbjct: 63 gctaaaattgattattgttgctatacagttcgaactatttatggggttttagggatcaaa 122 Query: 591 atttggatatt 601 |||||||||| Sbjct: 123 gtttggatatt 133
>dbj|AB087103.1| Neonotonia wightii chloroplast DNA, rps3-rpl16 intergenic spacer, complete sequence, strain:O00001 Length = 301 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 531 gctaaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaa 590 ||||||||||||||||| |||||| || |||||||||| ||||| || ||||| | ||| Sbjct: 63 gctaaaattgattattgttgctatacagttcgaactatttatggggttttagggatcaaa 122 Query: 591 atttggatatt 601 |||||||||| Sbjct: 123 gtttggatatt 133
>dbj|AB087086.1| Glycine cyrtoloba chloroplast DNA, rps3-rpl16 intergenic spacer, complete sequence Length = 306 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 511 ttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatct 570 |||| |||||||| || || || |||||||||||||| |||||| || |||||||||| | Sbjct: 44 ttcctctccaaaccattcgagcgaaaattgattattgttgctatacagttcgaactattt 103 Query: 571 atggagtattaggtgtaaaaatttggatatt 601 |||| || ||||| | ||| |||||||||| Sbjct: 104 atggggttttagggatcaaagtttggatatt 134
>dbj|AB087102.1| Glycine dolichocarpa chloroplast DNA, rps3-rpl16 intergenic spacer, complete sequence Length = 302 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 534 aaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaaatt 593 |||||||||||||| |||||| || |||||||||| ||||| || ||||| | ||| || Sbjct: 66 aaaattgattattgttgctatacagttcgaactatttatggcgttttagggatcaaagtt 125 Query: 594 tggatatt 601 |||||||| Sbjct: 126 tggatatt 133
>dbj|AB087101.1| Glycine tomentella chloroplast DNA, rps3-rpl16 intergenic spacer, complete sequence, strain:E00015-5-23 Length = 302 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 534 aaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaaatt 593 |||||||||||||| |||||| || |||||||||| ||||| || ||||| | ||| || Sbjct: 66 aaaattgattattgttgctatacagttcgaactatttatggcgttttagggatcaaagtt 125 Query: 594 tggatatt 601 |||||||| Sbjct: 126 tggatatt 133
>dbj|AB087100.1| Glycine tomentella chloroplast DNA, rps3-rpl16 intergenic spacer, complete sequence, strain:E00008-2 Length = 302 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 534 aaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaaatt 593 |||||||||||||| |||||| || |||||||||| ||||| || ||||| | ||| || Sbjct: 66 aaaattgattattgttgctatacagttcgaactatttatggcgttttagggatcaaagtt 125 Query: 594 tggatatt 601 |||||||| Sbjct: 126 tggatatt 133
>dbj|AB087099.1| Glycine tomentella chloroplast DNA, rps3-rpl16 intergenic spacer, complete sequence, strain:E00007-3 Length = 302 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 534 aaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaaatt 593 |||||||||||||| |||||| || |||||||||| ||||| || ||||| | ||| || Sbjct: 66 aaaattgattattgttgctatacagttcgaactatttatggcgttttagggatcaaagtt 125 Query: 594 tggatatt 601 |||||||| Sbjct: 126 tggatatt 133
>dbj|AB087098.1| Glycine tomentella chloroplast DNA, rps3-rpl16 intergenic spacer, complete sequence, strain:PI 339657 Length = 302 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 534 aaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaaatt 593 |||||||||||||| |||||| || |||||||||| ||||| || ||||| | ||| || Sbjct: 66 aaaattgattattgttgctatacagttcgaactatttatggcgttttagggatcaaagtt 125 Query: 594 tggatatt 601 |||||||| Sbjct: 126 tggatatt 133
>dbj|AB087097.1| Glycine tomentella chloroplast DNA, rps3-rpl16 intergenic spacer, complete sequence, strain:PI 446993 Length = 302 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 534 aaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaaatt 593 |||||||||||||| |||||| || |||||||||| ||||| || ||||| | ||| || Sbjct: 66 aaaattgattattgttgctatacagttcgaactatttatggcgttttagggatcaaagtt 125 Query: 594 tggatatt 601 |||||||| Sbjct: 126 tggatatt 133
>dbj|AB087096.1| Glycine tabacina chloroplast DNA, rps3-rpl16 intergenic spacer, complete sequence, strain:D00022-7 Length = 302 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 534 aaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaaatt 593 |||||||||||||| |||||| || |||||||||| ||||| || ||||| | ||| || Sbjct: 66 aaaattgattattgttgctatacagttcgaactatttatggcgttttagggatcaaagtt 125 Query: 594 tggatatt 601 |||||||| Sbjct: 126 tggatatt 133
>dbj|AB087095.1| Glycine tabacina chloroplast DNA, rps3-rpl16 intergenic spacer, complete sequence, strain:D00018-1 Length = 302 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 534 aaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaaatt 593 |||||||||||||| |||||| || |||||||||| ||||| || ||||| | ||| || Sbjct: 66 aaaattgattattgttgctatacagttcgaactatttatggcgttttagggatcaaagtt 125 Query: 594 tggatatt 601 |||||||| Sbjct: 126 tggatatt 133
>dbj|AB087094.1| Glycine tabacina chloroplast DNA, rps3-rpl16 intergenic spacer, complete sequence, strain:D00014 Length = 302 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 534 aaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaaatt 593 |||||||||||||| |||||| || |||||||||| ||||| || ||||| | ||| || Sbjct: 66 aaaattgattattgttgctatacagttcgaactatttatggcgttttagggatcaaagtt 125 Query: 594 tggatatt 601 |||||||| Sbjct: 126 tggatatt 133
>dbj|AB087093.1| Glycine tabacina chloroplast DNA, rps3-rpl16 intergenic spacer, complete sequence, strain:PI 483204 Length = 304 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 534 aaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaaatt 593 |||||||||||||| |||||| || |||||||||| ||||| || ||||| | ||| || Sbjct: 66 aaaattgattattgttgctatacagttcgaactatttatggggttttagggatcaaagtt 125 Query: 594 tggatatt 601 |||||||| Sbjct: 126 tggatatt 133
>dbj|AB087092.1| Glycine tabacina chloroplast DNA, rps3-rpl16 intergenic spacer, complete sequence, strain:PI 440996 Length = 303 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 534 aaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaaatt 593 |||||||||||||| |||||| || |||||||||| ||||| || ||||| | ||| || Sbjct: 67 aaaattgattattgttgctatacagttcgaactatttatggcgttttagggatcaaagtt 126 Query: 594 tggatatt 601 |||||||| Sbjct: 127 tggatatt 134
>dbj|AB087091.1| Glycine tabacina chloroplast DNA, rps3-rpl16 intergenic spacer, complete sequence, strain:PI 373990 Length = 307 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 534 aaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaaatt 593 |||||||||||||| |||||| || |||||||||| ||||| || ||||| | ||| || Sbjct: 67 aaaattgattattgttgctatacagttcgaactatttatggggttttagggatcaaagtt 126 Query: 594 tggatatt 601 |||||||| Sbjct: 127 tggatatt 134
>dbj|AB087090.1| Glycine microphylla chloroplast DNA, rps3-rpl16 intergenic spacer, complete sequence, strain:PI 440956 Length = 305 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 534 aaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaaatt 593 |||||||||||||| |||||| || |||||||||| ||||| || ||||| | ||| || Sbjct: 67 aaaattgattattgttgctatacagttcgaactatttatggggttttagggatcaaagtt 126 Query: 594 tggatatt 601 |||||||| Sbjct: 127 tggatatt 134
>dbj|AB087089.1| Glycine microphylla chloroplast DNA, rps3-rpl16 intergenic spacer, complete sequence, strain:IL449 PK#1 Length = 304 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 534 aaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaaatt 593 |||||||||||||| |||||| || |||||||||| ||||| || ||||| | ||| || Sbjct: 66 aaaattgattattgttgctatacagttcgaactatttatggggttttagggatcaaagtt 125 Query: 594 tggatatt 601 |||||||| Sbjct: 126 tggatatt 133
>dbj|AB087088.1| Glycine latrobeana chloroplast DNA, rps3-rpl16 intergenic spacer, complete sequence Length = 303 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 534 aaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaaatt 593 |||||||||||||| |||||| || |||||||||| ||||| || ||||| | ||| || Sbjct: 67 aaaattgattattgttgctatacagttcgaactatttatggcgttttagggatcaaagtt 126 Query: 594 tggatatt 601 |||||||| Sbjct: 127 tggatatt 134
>dbj|AB087087.1| Glycine latifolia chloroplast DNA, rps3-rpl16 intergenic spacer, complete sequence Length = 306 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 534 aaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaaatt 593 |||||||||||||| |||||| || |||||||||| ||||| || ||||| | ||| || Sbjct: 67 aaaattgattattgttgctatacagttcgaactatttatggggttttagggatcaaagtt 126 Query: 594 tggatatt 601 |||||||| Sbjct: 127 tggatatt 134
>dbj|AB087085.1| Glycine curvata chloroplast DNA, rps3-rpl16 intergenic spacer, complete sequence Length = 305 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 534 aaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaaatt 593 |||||||||||||| |||||| || |||||||||| ||||| || ||||| | ||| || Sbjct: 67 aaaattgattattgttgctatacagttcgaactatttatggggttttagggatcaaagtt 126 Query: 594 tggatatt 601 |||||||| Sbjct: 127 tggatatt 134
>dbj|AB087084.1| Glycine clandestina chloroplast DNA, rps3-rpl16 intergenic spacer, complete sequence Length = 302 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 534 aaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaaatt 593 |||||||||||||| |||||| || |||||||||| ||||| || ||||| | ||| || Sbjct: 66 aaaattgattattgttgctatacagttcgaactatttatggcgttttagggatcaaagtt 125 Query: 594 tggatatt 601 |||||||| Sbjct: 126 tggatatt 133
>dbj|AB087083.1| Glycine canescens chloroplast DNA, rps3-rpl16 intergenic spacer, complete sequence Length = 303 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 534 aaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaaatt 593 |||||||||||||| |||||| || |||||||||| ||||| || ||||| | ||| || Sbjct: 67 aaaattgattattgttgctatacagttcgaactatttatggcgttttagggatcaaagtt 126 Query: 594 tggatatt 601 |||||||| Sbjct: 127 tggatatt 134
>dbj|AB087082.1| Glycine argyrea chloroplast DNA, rps3-rpl16 intergenic spacer, complete sequence Length = 303 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 534 aaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaaatt 593 |||||||||||||| |||||| || |||||||||| ||||| || ||||| | ||| || Sbjct: 67 aaaattgattattgttgctatacagttcgaactatttatggcgttttagggatcaaagtt 126 Query: 594 tggatatt 601 |||||||| Sbjct: 127 tggatatt 134
>dbj|AB087081.1| Glycine arenaria chloroplast DNA, rps3-rpl16 intergenic spacer, complete sequence Length = 303 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 534 aaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaaatt 593 |||||||||||||| |||||| || |||||||||| ||||| || ||||| | ||| || Sbjct: 67 aaaattgattattgttgctatacagttcgaactatttatggcgttttagggatcaaagtt 126 Query: 594 tggatatt 601 |||||||| Sbjct: 127 tggatatt 134
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 391 caatgaaaaaagccattgaattaactaaaaaagcagatataa 432 ||||||||||||||||||||||| | ||||||| | |||||| Sbjct: 77969 caatgaaaaaagccattgaattagcaaaaaaaggaaatataa 77928
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Minus Query: 157 aaattcaaaaagaaatcgatacgatccacgtcataatccatatt 200 |||||||||| |||| | |||| |||||||||||||| |||||| Sbjct: 1887483 aaattcaaaaggaaaacaatacaatccacgtcataattcatatt 1887440
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 48.1 bits (24), Expect = 0.037 Identities = 54/64 (84%) Strand = Plus / Plus Query: 535 aaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaaattt 594 ||||||||||||| | ||||||| | |||||| |||||||||||||| ||||||| | Sbjct: 3488 aaattgattattgttactatccagcccaaactatttatggagtattaggaataaaaatct 3547 Query: 595 ggat 598 |||| Sbjct: 3548 ggat 3551
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Minus Query: 157 aaattcaaaaagaaatcgatacgatccacgtcataatccatatt 200 |||||||||| |||| | |||| |||||||||||||| |||||| Sbjct: 1887434 aaattcaaaaggaaaacaatacaatccacgtcataattcatatt 1887391
>emb|AL935154.2|CNS08CCP Oryza sativa chromosome 12, . BAC OSJNBb0109O08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128619 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Minus Query: 157 aaattcaaaaagaaatcgatacgatccacgtcataatccatatt 200 |||||||||| |||| | |||| |||||||||||||| |||||| Sbjct: 82174 aaattcaaaaggaaaacaatacaatccacgtcataattcatatt 82131
>emb|AL928752.2|CNS08CBP Oryza sativa chromosome 12, . BAC OSJNBb0034E23 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 107247 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Plus Query: 157 aaattcaaaaagaaatcgatacgatccacgtcataatccatatt 200 |||||||||| |||| | |||| |||||||||||||| |||||| Sbjct: 80738 aaattcaaaaggaaaacaatacaatccacgtcataattcatatt 80781
>gb|AC004849.1| Homo sapiens PAC clone RP4-659J6 from 7, complete sequence Length = 126801 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 353 agctttccaattaaaaaatagag 375 ||||||||||||||||||||||| Sbjct: 118801 agctttccaattaaaaaatagag 118779
>gb|AC146125.2| Pan troglodytes BAC clone RP43-4K13 from 7, complete sequence Length = 172424 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 353 agctttccaattaaaaaatagag 375 ||||||||||||||||||||||| Sbjct: 131079 agctttccaattaaaaaatagag 131101
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 46.1 bits (23), Expect = 0.15 Identities = 59/71 (83%) Strand = Plus / Minus Query: 531 gctaaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaa 590 ||||||||||||||||| |||| || | ||||||||| |||| ||||||| | ||| Sbjct: 88072 gctaaaattgattattgtgtctatacagtccgaactatccatgggctattaggcatcaaa 88013 Query: 591 atttggatatt 601 ||||||||||| Sbjct: 88012 atttggatatt 88002
>emb|BX255929.7| Zebrafish DNA sequence from clone CH211-271P5 in linkage group 14, complete sequence Length = 147460 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 142 taattacacatatagaaattcaaaaagaaat 172 |||||||| ||||||||||| |||||||||| Sbjct: 128164 taattacaaatatagaaattaaaaaagaaat 128134
>emb|BX004822.12| Zebrafish DNA sequence from clone DKEY-18F18, complete sequence Length = 201902 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 142 taattacacatatagaaattcaaaaagaaat 172 |||||||| ||||||||||| |||||||||| Sbjct: 111422 taattacaaatatagaaattaaaaaagaaat 111392
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 46.1 bits (23), Expect = 0.15 Identities = 71/87 (81%) Strand = Plus / Minus Query: 336 attcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaaggcaatg 395 ||||||||||||||||| ||||| |||||| ||| | ||||| | || ||| | ||| Sbjct: 81980 attcttgcagaatatattgctttgcaattagaaagtcgagttgcttttagaagaactatg 81921 Query: 396 aaaaaagccattgaattaactaaaaaa 422 |||||||| ||||||||| | |||||| Sbjct: 81920 aaaaaagctattgaattagcaaaaaaa 81894 Score = 46.1 bits (23), Expect = 0.15 Identities = 59/71 (83%) Strand = Plus / Minus Query: 531 gctaaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaa 590 ||||||||||||||||| | || ||| || ||| || ||||||||||| || ||||| Sbjct: 81785 gctaaaattgattattgttattacccagctcaaacaatttatggagtattgggaataaaa 81726 Query: 591 atttggatatt 601 ||||||||||| Sbjct: 81725 atttggatatt 81715
>gb|AY540612.1| Thompsonella spathulata ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 361 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 588 aaaatttggatattcgtagacgaagaataa 617 |||||||||||||| |||||||||| |||| Sbjct: 352 aaaatttggatatttgtagacgaagtataa 323
>gb|AY540611.1| Thompsonella minutiflora ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 361 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 588 aaaatttggatattcgtagacgaagaataa 617 |||||||||||||| |||||||||| |||| Sbjct: 352 aaaatttggatatttgtagacgaagtataa 323
>gb|AY540609.1| Sedum palmeri ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1369 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 588 aaaatttggatattcgtagacgaagaataa 617 |||||||||||||| |||||||||| |||| Sbjct: 1361 aaaatttggatattagtagacgaagtataa 1332
>gb|AY540608.1| Sedum corynephyllum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1369 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 588 aaaatttggatattcgtagacgaagaataa 617 |||||||||||||| |||||||||| |||| Sbjct: 1360 aaaatttggatatttgtagacgaagtataa 1331
>gb|AY540607.1| Sedum clavatum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1362 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 588 aaaatttggatattcgtagacgaagaataa 617 |||||||||||||| |||||||||| |||| Sbjct: 1353 aaaatttggatatttgtagacgaagtataa 1324
>gb|AY540606.1| Pachyphytum viride ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1373 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 588 aaaatttggatattcgtagacgaagaataa 617 |||||||||||||| |||||||||| |||| Sbjct: 1364 aaaatttggatatttgtagacgaagtataa 1335
>gb|AY540605.1| Graptopetalum superbum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1365 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 588 aaaatttggatattcgtagacgaagaataa 617 |||||||||||||| |||||||||| |||| Sbjct: 1356 aaaatttggatatttgtagacgaagtataa 1327
>gb|AY540604.1| Graptopetalum suaveolens ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1130 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 588 aaaatttggatattcgtagacgaagaataa 617 |||||||||||||| |||||||||| |||| Sbjct: 1121 aaaatttggatatttgtagacgaagtataa 1092
>gb|AY540603.1| Graptopetalum saxifragoides ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1373 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 588 aaaatttggatattcgtagacgaagaataa 617 |||||||||||||| |||||||||| |||| Sbjct: 1364 aaaatttggatatttgtagacgaagtataa 1335
>gb|AY540602.1| Graptopetalum rusbyi ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 355 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 588 aaaatttggatattcgtagacgaagaataa 617 |||||||||||||| |||||||||| |||| Sbjct: 346 aaaatttggatatttgtagacgaagtataa 317
>gb|AY540600.1| Graptopetalum pentandrum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1283 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 588 aaaatttggatattcgtagacgaagaataa 617 |||||||||||||| |||||||||| |||| Sbjct: 1274 aaaatttggatatttgtagacgaagtataa 1245
>gb|AY540599.1| Graptopetalum paraguayense ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1205 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 588 aaaatttggatattcgtagacgaagaataa 617 |||||||||||||| |||||||||| |||| Sbjct: 1195 aaaatttggatatttgtagacgaagtataa 1166
>gb|AY540598.1| Graptopetalum pachyphyllum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1378 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 588 aaaatttggatattcgtagacgaagaataa 617 |||||||||||||| |||||||||| |||| Sbjct: 1369 aaaatttggatatttgtagacgaagtataa 1340
>gb|AY540597.1| Graptopetalum mendozae ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1363 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 588 aaaatttggatattcgtagacgaagaataa 617 |||||||||||||| |||||||||| |||| Sbjct: 1354 aaaatttggatatttgtagacgaagtataa 1325
>gb|AY540596.1| Graptopetalum marginatum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1368 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 588 aaaatttggatattcgtagacgaagaataa 617 |||||||||||||| |||||||||| |||| Sbjct: 1359 aaaatttggatatttgtagacgaagtataa 1330
>gb|AY540595.1| Graptopetalum macdougallii ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 361 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 588 aaaatttggatattcgtagacgaagaataa 617 |||||||||||||| |||||||||| |||| Sbjct: 352 aaaatttggatatttgtagacgaagtataa 323
>gb|AY540594.1| Graptopetalum grande ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 361 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 588 aaaatttggatattcgtagacgaagaataa 617 |||||||||||||| |||||||||| |||| Sbjct: 352 aaaatttggatatttgtagacgaagtataa 323
>gb|AY540593.1| Graptopetalum glassii ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1360 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 588 aaaatttggatattcgtagacgaagaataa 617 |||||||||||||| |||||||||| |||| Sbjct: 1351 aaaatttggatatttgtagacgaagtataa 1322
>gb|AY540592.1| Graptopetalum fruticosum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1361 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 588 aaaatttggatattcgtagacgaagaataa 617 |||||||||||||| |||||||||| |||| Sbjct: 1353 aaaatttggatatttgtagacgaagtataa 1324
>gb|AY540590.1| Graptopetalum craigii ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1364 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 588 aaaatttggatattcgtagacgaagaataa 617 |||||||||||||| |||||||||| |||| Sbjct: 1355 aaaatttggatatttgtagacgaagtataa 1326
>gb|AY540589.1| Graptopetalum bernalense ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1363 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 588 aaaatttggatattcgtagacgaagaataa 617 |||||||||||||| |||||||||| |||| Sbjct: 1355 aaaatttggatatttgtagacgaagtataa 1326
>gb|AY540588.1| Graptopetalum bartramii ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1123 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 588 aaaatttggatattcgtagacgaagaataa 617 |||||||||||||| |||||||||| |||| Sbjct: 1114 aaaatttggatatttgtagacgaagtataa 1085
>gb|AY540587.1| Graptopetalum amethystinum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1361 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 588 aaaatttggatattcgtagacgaagaataa 617 |||||||||||||| |||||||||| |||| Sbjct: 1352 aaaatttggatatttgtagacgaagtataa 1323
>gb|AY540586.1| Echeveria pringlei ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 361 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 588 aaaatttggatattcgtagacgaagaataa 617 |||||||||||||| |||||||||| |||| Sbjct: 352 aaaatttggatatttgtagacgaagtataa 323
>gb|AY540585.1| Echeveria gibbiflora ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 361 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 588 aaaatttggatattcgtagacgaagaataa 617 |||||||||||||| |||||||||| |||| Sbjct: 352 aaaatttggatatttgtagacgaagtataa 323
>gb|AY540584.1| Echeveria fulgens ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 361 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 588 aaaatttggatattcgtagacgaagaataa 617 |||||||||||||| |||||||||| |||| Sbjct: 352 aaaatttggatatttgtagacgaagtataa 323
>gb|AY540583.1| Cremnophila nutans ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 355 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 588 aaaatttggatattcgtagacgaagaataa 617 |||||||||||||| |||||||||| |||| Sbjct: 346 aaaatttggatatttgtagacgaagtataa 317
>gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca coagulata), complete genome Length = 686194 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 334 acattcttgcagaatatatagc 355 |||||||||||||||||||||| Sbjct: 76253 acattcttgcagaatatatagc 76274
>gb|AC091298.2| Danio rerio clone 116A2, complete sequence Length = 50944 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 279 aaccagagatttaatatttcta 300 |||||||||||||||||||||| Sbjct: 15630 aaccagagatttaatatttcta 15651
>emb|BX901917.9| Zebrafish DNA sequence from clone DKEY-32E10 in linkage group 5, complete sequence Length = 238589 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 279 aaccagagatttaatatttcta 300 |||||||||||||||||||||| Sbjct: 76955 aaccagagatttaatatttcta 76976
>emb|CR385064.7| Zebrafish DNA sequence from clone CH211-236H18 in linkage group 5, complete sequence Length = 185245 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 279 aaccagagatttaatatttcta 300 |||||||||||||||||||||| Sbjct: 145981 aaccagagatttaatatttcta 145960
>dbj|AP004797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0547F09 Length = 140615 Score = 44.1 bits (22), Expect = 0.58 Identities = 80/98 (81%), Gaps = 1/98 (1%) Strand = Plus / Plus Query: 429 ataaggggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgcc 488 |||| |||||| |||||||||||||| | | ||||| || |||||||||| | |||| | Sbjct: 69205 ataaagggagttaaagtaaaaattgcatgccatctcgtagaaaaagaaattacgcgtgtc 69264 Query: 489 gaatccattaaaaggggcagacttcccctccaaacaat 526 |||| ||| |||| || ||||||| |||| ||||||| Sbjct: 69265 gaatacatgaaaa-aggtagacttcacctctaaacaat 69301
>emb|AJ459317.1|SPO459317 Sweet potato mild mottle virus partial cp gene for polyprotein, genomic RNA, isolate KAM Length = 1817 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 232 caatcgaagaattagagaaaga 253 |||||||||||||||||||||| Sbjct: 614 caatcgaagaattagagaaaga 635
>gb|AY722948.2| Borrelia garinii PBi variable plasmid segment G1a13d03.r1, WORKING DRAFT SEQUENCE Length = 2075 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 293 tatttctatcgaaaaagttaaagaa 317 ||||||||| ||||||||||||||| Sbjct: 670 tatttctattgaaaaagttaaagaa 646
>gb|AY540601.1| Graptopetalum pusillum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1375 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 588 aaaatttggatattcgtagacgaag 612 |||||||||||||| |||||||||| Sbjct: 1366 aaaatttggatatttgtagacgaag 1342
>gb|AY540582.1| Cremnophila linguifolia ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1369 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 589 aaatttggatattcgtagacgaagaataa 617 ||||||||||||| |||||||||| |||| Sbjct: 1360 aaatttggatatttgtagacgaagtataa 1332
>gb|DQ069458.1| Ginkgo biloba ribosomal protein S3 (rps3) gene, partial cds; chloroplast Length = 654 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 370 atagagtttcattccgaaaggcaatgaaaaaagccattgaa 410 |||||||||||||| |||| || |||||||||| |||||| Sbjct: 410 atagagtttcattcagaaaaacagtgaaaaaagctattgaa 450
>gb|AC099798.4| Homo sapiens BAC clone RP11-559E21 from 7, complete sequence Length = 131328 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 267 attaactctgtaaaccagaga 287 ||||||||||||||||||||| Sbjct: 64895 attaactctgtaaaccagaga 64915
>gb|AC060225.12| Homo sapiens 3 BAC RP11-23J16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172464 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 352 tagctttccaattaaaaaata 372 ||||||||||||||||||||| Sbjct: 55771 tagctttccaattaaaaaata 55751
>gb|AC125610.4| Homo sapiens 3 BAC RP11-189B7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 159706 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 taattacacatatagaaattc 162 ||||||||||||||||||||| Sbjct: 83576 taattacacatatagaaattc 83596
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 597 atattcgtagacgaagaataa 617 ||||||||||||||||||||| Sbjct: 2241129 atattcgtagacgaagaataa 2241109
>ref|XM_626441.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd2_2370), partial mRNA Length = 405 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 209 aaatttattaaagaaaaaaggagca 233 ||||||||||||||||||| ||||| Sbjct: 34 aaatttattaaagaaaaaatgagca 58
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete sequence Length = 4332241 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 155 agaaattcaaaaagaaatcga 175 ||||||||||||||||||||| Sbjct: 3776602 agaaattcaaaaagaaatcga 3776582
>gb|AC073181.8|AC073181 Homo sapiens clone RP13-493F23, complete sequence Length = 105036 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 attaactctgtaaaccagaga 287 ||||||||||||||||||||| Sbjct: 55673 attaactctgtaaaccagaga 55653
>gb|AE000784.1| Borrelia burgdorferi B31 plasmid lp28-3, complete sequence Length = 28601 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 293 tatttctatcgaaaaagttaaagaa 317 ||||||||| ||||||||||||||| Sbjct: 19118 tatttctattgaaaaagttaaagaa 19142
>gb|AC016562.7| Homo sapiens chromosome 5 clone CTC-484A9, complete sequence Length = 185774 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 taaaccagagatttaatattt 297 ||||||||||||||||||||| Sbjct: 42500 taaaccagagatttaatattt 42480
>emb|BX004814.8| Zebrafish DNA sequence from clone CH211-103I6 in linkage group 1, complete sequence Length = 171710 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 258 caaaaggaaattaactctgtaaacc 282 ||||||| ||||||||||||||||| Sbjct: 82165 caaaaggcaattaactctgtaaacc 82189
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, complete sequence Length = 4277185 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 155 agaaattcaaaaagaaatcga 175 ||||||||||||||||||||| Sbjct: 497460 agaaattcaaaaagaaatcga 497480
>emb|AL928653.4| Mouse DNA sequence from clone RP23-410F9 on chromosome 2, complete sequence Length = 72045 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 346 aatatatagctttccaattaaaaaa 370 |||||||| |||||||||||||||| Sbjct: 63913 aatatataactttccaattaaaaaa 63937
>gb|AC137928.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0040B10, complete sequence Length = 150825 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 atttattaaagaaaaaagga 230 |||||||||||||||||||| Sbjct: 81434 atttattaaagaaaaaagga 81453
>gb|AC163295.2| Mus musculus BAC clone RP23-132K20 from chromosome 14, complete sequence Length = 212576 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 tgtaaaccagagatttaatatttc 298 |||||| ||||||||||||||||| Sbjct: 100139 tgtaaagcagagatttaatatttc 100116
>gb|AC117750.7| Mus musculus chromosome 8, clone RP24-325F22, complete sequence Length = 187432 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 aaatttattaaagaaaaaag 228 |||||||||||||||||||| Sbjct: 183960 aaatttattaaagaaaaaag 183941
>gb|AC078839.4| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBa0094J09, complete sequence Length = 168192 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 tacaaaagaataggaaaaag 56 |||||||||||||||||||| Sbjct: 36095 tacaaaagaataggaaaaag 36076
>gb|AC114984.18| Mus musculus chromosome 18, clone RP23-248F9, complete sequence Length = 185563 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 aagaataggaaaaagggctc 61 |||||||||||||||||||| Sbjct: 135399 aagaataggaaaaagggctc 135380
>gb|U88314.4| Caenorhabditis elegans cosmid C46H11, complete sequence Length = 49293 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 acatatagaaattcaaaaagaaat 172 ||||||| |||||||||||||||| Sbjct: 252 acatataaaaattcaaaaagaaat 275
>gb|AC182652.2| Populus trichocarpa clone Pop1-120B14, complete sequence Length = 103155 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 agctttccaattaaaaaata 372 |||||||||||||||||||| Sbjct: 96748 agctttccaattaaaaaata 96767
>ref|NG_004113.1| Homo sapiens CCL3L1-CCL4L1 chemokine gene cluster (CCL3L1-CCL4L1@) on chromosome 17 Length = 149781 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 ttaaaaaatagagtttcatt 382 |||||||||||||||||||| Sbjct: 123321 ttaaaaaatagagtttcatt 123340 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 ttaaaaaatagagtttcatt 382 |||||||||||||||||||| Sbjct: 109795 ttaaaaaatagagtttcatt 109814 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 ttaaaaaatagagtttcatt 382 |||||||||||||||||||| Sbjct: 21731 ttaaaaaatagagtttcatt 21750
>gb|AC137620.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0014K18, complete sequence Length = 123508 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 atttattaaagaaaaaagga 230 |||||||||||||||||||| Sbjct: 5984 atttattaaagaaaaaagga 6003
>ref|XM_715962.1| Candida albicans SC5314 hypothetical protein (CaO19_8429), mRNA Length = 1365 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 aagaattagagaaagatctacaaa 261 |||||||||||||||||| ||||| Sbjct: 1305 aagaattagagaaagatcaacaaa 1328
>ref|XM_715840.1| Candida albicans SC5314 hypothetical protein (CaO19_809), mRNA Length = 1365 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 aagaattagagaaagatctacaaa 261 |||||||||||||||||| ||||| Sbjct: 1305 aagaattagagaaagatcaacaaa 1328
>gb|AC147030.3| Pan troglodytes BAC clone RP43-95K17 from 7, complete sequence Length = 166955 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 atttattaaagaaaaaagga 230 |||||||||||||||||||| Sbjct: 56303 atttattaaagaaaaaagga 56322
>gb|AC123075.5| Mus musculus BAC clone RP23-181C16 from chromosome 3, complete sequence Length = 198063 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 aatgaaaaaagccattgaat 411 |||||||||||||||||||| Sbjct: 90338 aatgaaaaaagccattgaat 90319
>gb|AC073900.6| Homo sapiens BAC clone RP11-172J11 from 7, complete sequence Length = 86735 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 atttattaaagaaaaaagga 230 |||||||||||||||||||| Sbjct: 15677 atttattaaagaaaaaagga 15658
>gb|AC101775.10| Mus musculus chromosome 19, clone RP24-116B5, complete sequence Length = 167945 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 141 gtaattacacatatagaaattcaaaaagaaat 172 ||||||| | ||||| |||||||||||||||| Sbjct: 86834 gtaattaaatatataaaaattcaaaaagaaat 86803
>gb|AC132357.3| Mus musculus BAC clone RP24-120G2 from chromosome 18, complete sequence Length = 189088 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 aagaataggaaaaagggctc 61 |||||||||||||||||||| Sbjct: 24927 aagaataggaaaaagggctc 24946
>gb|AC138717.2| Mus musculus BAC clone RP23-268G21 from chromosome 7, complete sequence Length = 141977 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 ttattaaagaaaaaaggagc 232 |||||||||||||||||||| Sbjct: 22148 ttattaaagaaaaaaggagc 22167
>gb|AC124536.4| Mus musculus BAC clone RP23-332H4 from chromosome 3, complete sequence Length = 165047 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 taaaaaatagagtttcattc 383 |||||||||||||||||||| Sbjct: 23321 taaaaaatagagtttcattc 23302
>gb|AC110508.8| Mus musculus chromosome 3, clone RP23-382L1, complete sequence Length = 224790 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 ttaaaaaatagagtttcatt 382 |||||||||||||||||||| Sbjct: 56663 ttaaaaaatagagtttcatt 56682
>ref|XM_643202.1| Entamoeba histolytica HM-1:IMSS Sec1 family protein (487.t00008) partial mRNA Length = 1590 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 tgaattaactaaaaaagcag 426 |||||||||||||||||||| Sbjct: 837 tgaattaactaaaaaagcag 856
>ref|XM_644152.1| Entamoeba histolytica HM-1:IMSS Sec1 family protein (328.t00006) partial mRNA Length = 1515 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 tgaattaactaaaaaagcag 426 |||||||||||||||||||| Sbjct: 762 tgaattaactaaaaaagcag 781
>ref|XM_644321.1| Entamoeba histolytica HM-1:IMSS Sec1 family protein (306.t00005) partial mRNA Length = 1590 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 tgaattaactaaaaaagcag 426 |||||||||||||||||||| Sbjct: 837 tgaattaactaaaaaagcag 856
>gb|AC098715.3| Mus musculus BAC clone RP23-2D23 from 7, complete sequence Length = 247835 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 caaatttattaaagaaaaaa 227 |||||||||||||||||||| Sbjct: 132881 caaatttattaaagaaaaaa 132862
>gb|U88165.1| Caenorhabditis elegans cosmid F54C1, complete sequence Length = 31433 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 acatatagaaattcaaaaagaaat 172 ||||||| |||||||||||||||| Sbjct: 31285 acatataaaaattcaaaaagaaat 31308
>gb|AC102092.7| Mus musculus chromosome 3, clone RP23-20B1, complete sequence Length = 234874 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 taaaaaatagagtttcattc 383 |||||||||||||||||||| Sbjct: 90974 taaaaaatagagtttcattc 90993
>emb|AL512326.25| Human DNA sequence from clone RP11-345I18 on chromosome 1 Contains the 5' end of the ABL2 gene for v-abl Abelson murine leukemia viral oncogene homolog 2 (arg, Abelson-related gene), a ubiquinol-cytochrome c reductase (6.4kD) subunit (UQCR) pseudogene, a pseudogene similar to mouse SET translocation, a eukaryotic translation initiation factor 4A, isoform 1 pseudogene, a UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 3 (B3GALT3) pseudogene, a cytochrome c oxidase subunit Vb (COX5B) pseudogene, the 5' end of the SOAT1 gene for sterol O-acyltransferase (acyl-Coenzyme A: cholesterol acyltransferase) 1, complete sequence Length = 187270 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 aaaccagagatttaatattt 297 |||||||||||||||||||| Sbjct: 27340 aaaccagagatttaatattt 27321
>emb|AL391123.19| Human DNA sequence from clone RP11-184L18 on chromosome 13 Contains a pseudogene similar to part of a novel protein (KIAA0802), complete sequence Length = 121496 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 250 aagatctacaaaaggaaattaact 273 ||||| |||||||||||||||||| Sbjct: 80516 aagatgtacaaaaggaaattaact 80539
>emb|AL353646.9| Human DNA sequence from clone RP11-186A13 on chromosome 13, complete sequence Length = 49820 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 ttgtataagaactatatacaaaag 44 ||||||||||| |||||||||||| Sbjct: 3835 ttgtataagaaatatatacaaaag 3858
>emb|AL031769.1|HS194O8 Human DNA sequence from clone RP1-194O8 on chromosome 6q24.1-25.3, complete sequence Length = 126839 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 aatagaaaaatggactcagg 127 |||||||||||||||||||| Sbjct: 23389 aatagaaaaatggactcagg 23408
>ref|XM_962669.1| PREDICTED: Tribolium castaneum similar to CG18578-PA (LOC656120), mRNA Length = 1587 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 227 aggagcaatcgaagaattagagaa 250 ||||||||| |||||||||||||| Sbjct: 237 aggagcaatggaagaattagagaa 260
>emb|X87371.1|SCX731 S.cerevisiae DNA from chromosome X (cosmids 7,31) Length = 40724 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 aaagaaaaaaggagcaatcg 237 |||||||||||||||||||| Sbjct: 29190 aaagaaaaaaggagcaatcg 29171
>gb|AC165086.4| Mus musculus BAC clone RP23-209B2 from chromosome 7, complete sequence Length = 195905 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 ttattaaagaaaaaaggagc 232 |||||||||||||||||||| Sbjct: 75375 ttattaaagaaaaaaggagc 75356
>gb|AE016828.2| Coxiella burnetii RSA 493, complete genome Length = 1995281 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 caaaaagaaatcgatacgat 181 |||||||||||||||||||| Sbjct: 767012 caaaaagaaatcgatacgat 767031
>gb|AC087376.5| Homo sapiens chromosome 11, clone RP11-230O19, complete sequence Length = 164441 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 355 ctttccaattaaaaaatagagttt 378 |||| ||||||||||||||||||| Sbjct: 156629 cttttcaattaaaaaatagagttt 156606
>emb|X56445.1|SCMRS3G Yeast nuclear DNA fragment N3/2.0 with MRS3 gene, involved in mtRNA splicing Length = 2096 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 aaagaaaaaaggagcaatcg 237 |||||||||||||||||||| Sbjct: 576 aaagaaaaaaggagcaatcg 557
>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 Length = 1841713 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 559 ttcgaactatctatggagta 578 |||||||||||||||||||| Sbjct: 281593 ttcgaactatctatggagta 281574
>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome Length = 2878529 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 acatatagaaattcaaaaagaaat 172 ||||| |||||||||||||||||| Sbjct: 1219119 acatagagaaattcaaaaagaaat 1219142
>gb|AC027104.6| Homo sapiens chromosome 15, clone RP11-326L17, complete sequence Length = 180202 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 aaatttattaaagaaaaaag 228 |||||||||||||||||||| Sbjct: 95312 aaatttattaaagaaaaaag 95331
>gb|AC097498.3| Homo sapiens BAC clone RP11-326N15 from 4, complete sequence Length = 144511 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 405 attgaattaactaaaaaagc 424 |||||||||||||||||||| Sbjct: 93150 attgaattaactaaaaaagc 93169
>gb|AC019294.7| Homo sapiens chromosome , clone RP11-24M17, complete sequence Length = 164310 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 aaatttattaaagaaaaaag 228 |||||||||||||||||||| Sbjct: 7538 aaatttattaaagaaaaaag 7557
>gb|AC013714.8| Homo sapiens chromosome , clone RP11-22P4, complete sequence Length = 140009 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 355 ctttccaattaaaaaatagagttt 378 |||| ||||||||||||||||||| Sbjct: 7609 cttttcaattaaaaaatagagttt 7586
>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome Length = 3544738 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 445 taaaaattgcgggtcgtctcggag 468 ||||||||||||||||| |||||| Sbjct: 990828 taaaaattgcgggtcgtttcggag 990805
>gb|AC131056.5| Homo sapiens chromosome 17, clone RP11-893G17, complete sequence Length = 193646 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 ttaaaaaatagagtttcatt 382 |||||||||||||||||||| Sbjct: 161558 ttaaaaaatagagtttcatt 161539 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 ttaaaaaatagagtttcatt 382 |||||||||||||||||||| Sbjct: 73494 ttaaaaaatagagtttcatt 73475 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 ttaaaaaatagagtttcatt 382 |||||||||||||||||||| Sbjct: 59968 ttaaaaaatagagtttcatt 59949
>emb|BX322541.12| Zebrafish DNA sequence from clone DKEY-78P10 in linkage group 5, complete sequence Length = 227940 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 caaatttattaaagaaaaaa 227 |||||||||||||||||||| Sbjct: 84371 caaatttattaaagaaaaaa 84352
>emb|BX537289.6| Zebrafish DNA sequence from clone DKEY-35M8 in linkage group 5, complete sequence Length = 135274 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 caaatttattaaagaaaaaa 227 |||||||||||||||||||| Sbjct: 27208 caaatttattaaagaaaaaa 27189
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 40.1 bits (20), Expect = 9.1 Identities = 71/88 (80%) Strand = Plus / Minus Query: 511 ttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatct 570 ||||||| || ||||| || |||| ||||||||||| | ||||| ||| ||| |||| Sbjct: 60584 ttcccctacagacaattcgggctaggattgattattgttattatccggttcaaaccatct 60525 Query: 571 atggagtattaggtgtaaaaatttggat 598 ||||||| ||||| | ||||||||||| Sbjct: 60524 atggagttttagggatcaaaatttggat 60497
>gb|AF316639.1|AF316639 Streptococcus pneumoniae serotype 4 capsular polysaccharide gene cluster, complete sequence Length = 20558 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 tagggattgtataagaactatata 38 |||||||||||||||||| ||||| Sbjct: 6290 tagggattgtataagaacgatata 6267
>gb|AC078994.3|AC078994 Homo sapiens chromosome 2 clone RP11-16B4 containing NRXN1 gene, partial cds, complete sequence Length = 179616 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 acacatatagaaattcaaaa 166 |||||||||||||||||||| Sbjct: 20380 acacatatagaaattcaaaa 20399
>gb|AC154545.2| Mus musculus BAC clone RP23-431G16 from chromosome 16, complete sequence Length = 202933 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 atagaaattcaaaaagaaat 172 |||||||||||||||||||| Sbjct: 145809 atagaaattcaaaaagaaat 145828
>gb|DQ009672.1| Homo sapiens v-abl Abelson murine leukemia viral oncogene homolog 2 (arg, Abelson-related gene) (ABL2) gene, complete cds Length = 125255 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 aaaccagagatttaatattt 297 |||||||||||||||||||| Sbjct: 77994 aaaccagagatttaatattt 78013
>gb|AC012353.6| Homo sapiens BAC clone RP11-82P18 from 2, complete sequence Length = 203755 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 attcccaaatttattaaaga 222 |||||||||||||||||||| Sbjct: 78965 attcccaaatttattaaaga 78984
>gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome Length = 2160842 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 tagggattgtataagaactatata 38 |||||||||||||||||| ||||| Sbjct: 324847 tagggattgtataagaacgatata 324824
>gb|AC024174.2|T21E18 Sequence of BAC T21E18 from Arabidopsis thaliana chromosome 1, complete sequence Length = 74316 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 143 aattacacatatagaaattcaaaa 166 ||||||||||||| |||||||||| Sbjct: 8517 aattacacatataaaaattcaaaa 8540
>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome Length = 2814816 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 acatatagaaattcaaaaagaaat 172 ||||| |||||||||||||||||| Sbjct: 1142791 acatagagaaattcaaaaagaaat 1142814
>dbj|AP003311.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0024G09 Length = 175565 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 349 atatagctttccaattaaaaaata 372 |||||| ||||||||||||||||| Sbjct: 62594 atatagatttccaattaaaaaata 62571
>dbj|AP002483.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0019D06 Length = 167405 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 349 atatagctttccaattaaaaaata 372 |||||| ||||||||||||||||| Sbjct: 117128 atatagatttccaattaaaaaata 117105
>dbj|AP004751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0494D11 Length = 149198 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 tacaaaagaataggaaaaag 56 |||||||||||||||||||| Sbjct: 31032 tacaaaagaataggaaaaag 31051
>dbj|AK024994.1| Homo sapiens cDNA: FLJ21341 fis, clone COL02653 Length = 1735 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 ttaaaaaatagagtttcatt 382 |||||||||||||||||||| Sbjct: 256 ttaaaaaatagagtttcatt 275
>gb|AC006427.13|AC006427 Homo sapiens chromosome 4 clone C0201M04, complete sequence Length = 178524 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 264 gaaattaactctgtaaaccagaga 287 |||||||||||||||||| ||||| Sbjct: 66607 gaaattaactctgtaaacaagaga 66630
>emb|CR931635.1| Streptococcus pneumoniae strain 600/62 (serotype 4) Length = 20936 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 tagggattgtataagaactatata 38 |||||||||||||||||| ||||| Sbjct: 6328 tagggattgtataagaacgatata 6305
>emb|CR931718.1| Streptococcus pneumoniae strain Eddy nr. 72 (serotype 45) Length = 27591 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 tagggattgtataagaactatata 38 |||||||||||||||||| ||||| Sbjct: 6360 tagggattgtataagaacgatata 6337
>emb|Z49410.1|SCYJL135W S.cerevisiae chromosome X reading frame ORF YJL135w Length = 3345 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 aaagaaaaaaggagcaatcg 237 |||||||||||||||||||| Sbjct: 3040 aaagaaaaaaggagcaatcg 3021
>emb|Z49408.1|SCYJL133W S.cerevisiae chromosome X reading frame ORF YJL133w Length = 2496 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 aaagaaaaaaggagcaatcg 237 |||||||||||||||||||| Sbjct: 896 aaagaaaaaaggagcaatcg 877
>emb|X06239.1|SCMRS3 Yeast MRS3 gene for suppression of a mitochondrial splice defect in the first intron of the COB gene Length = 1986 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 aaagaaaaaaggagcaatcg 237 |||||||||||||||||||| Sbjct: 537 aaagaaaaaaggagcaatcg 518
>gb|AC006442.1|AC006442 Homo sapiens, clone hRPK.7_A_1, complete sequence Length = 155935 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 ttgtataagaactatatacaaaag 44 ||||||||||| |||||||||||| Sbjct: 17366 ttgtataagaaatatatacaaaag 17343
>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence Length = 2906179 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 391 caatgaaaaaagccattgaattaa 414 |||| ||||||||||||||||||| Sbjct: 1496448 caattaaaaaagccattgaattaa 1496471
>gb|U92462.1|PAU92462 Picea abies ribosomal protein L16 (rpl16) partial cds, ribosomal proteins S3 (rps3), L22 (rpl22), S19 (rps19), L2 (rpl2), and L23 (rpl23) genes, complete cds, tRNA-Ile (trnI) gene, complete sequence and psbA, ndhC and ndhK pseudogenes, chloroplast genes encoding chloroplast products Length = 4723 Score = 40.1 bits (20), Expect = 9.1 Identities = 71/88 (80%) Strand = Plus / Minus Query: 511 ttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatct 570 ||||||| || ||||| || |||| ||||||||||| | ||||| ||| ||| |||| Sbjct: 257 ttcccctacagacaattcgggctaggattgattattgttattatccggttcaaaccatct 198 Query: 571 atggagtattaggtgtaaaaatttggat 598 ||||||| ||||| | ||||||||||| Sbjct: 197 atggagttttagggatcaaaatttggat 170
>gb|AC113464.17| Mus musculus chromosome 8, clone RP23-183P1, complete sequence Length = 191444 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 aaatttattaaagaaaaaag 228 |||||||||||||||||||| Sbjct: 170253 aaatttattaaagaaaaaag 170272
>emb|CT033786.13| Mouse DNA sequence from clone RP24-298F18 on chromosome 14, complete sequence Length = 185421 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 tgtaaaccagagatttaatatttc 298 |||||| ||||||||||||||||| Sbjct: 4200 tgtaaagcagagatttaatatttc 4177
>emb|AL929582.10| Zebrafish DNA sequence from clone CH211-117M12, complete sequence Length = 175577 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 tataagaactatatacaaaa 43 |||||||||||||||||||| Sbjct: 56707 tataagaactatatacaaaa 56688
>emb|AL935269.7| Zebrafish DNA sequence from clone DKEY-46J18, complete sequence Length = 177658 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 tataagaactatatacaaaa 43 |||||||||||||||||||| Sbjct: 121653 tataagaactatatacaaaa 121672
>gb|AC141895.4| Mus musculus BAC clone RP23-299L22 from 10, complete sequence Length = 178358 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 349 atatagctttccaattaaaaaata 372 ||||||||||||| |||||||||| Sbjct: 17818 atatagctttccatttaaaaaata 17795
>emb|AL845174.4| Mouse DNA sequence from clone RP23-156P22 on chromosome 2, complete sequence Length = 216475 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 aaagatctacaaaaggaaat 268 |||||||||||||||||||| Sbjct: 192100 aaagatctacaaaaggaaat 192119
>dbj|D45895.1| Caenorhabditis elegans DNA for troponin C, complete cds Length = 3471 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 149 acatatagaaattcaaaaagaaat 172 ||||||| |||||||||||||||| Sbjct: 1202 acatataaaaattcaaaaagaaat 1179
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 567 atctatggagtattaggtgtaaaaatttggat 598 ||||||||||| ||||| ||||||||||||| Sbjct: 62419 atctatggagttttagggataaaaatttggat 62388
>emb|AL627086.22| Mouse DNA sequence from clone RP23-477P14 on chromosome 3, complete sequence Length = 106019 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 ttaaaaaatagagtttcatt 382 |||||||||||||||||||| Sbjct: 19000 ttaaaaaatagagtttcatt 19019 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9,706,013 Number of Sequences: 3902068 Number of extensions: 9706013 Number of successful extensions: 230801 Number of sequences better than 10.0: 245 Number of HSP's better than 10.0 without gapping: 248 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 228357 Number of HSP's gapped (non-prelim): 2350 length of query: 665 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 642 effective length of database: 17,143,297,704 effective search space: 11005997125968 effective search space used: 11005997125968 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
