ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags31n23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478636.1| Oryza sativa (japonica cultivar-group), mRNA 285 7e-74
2dbj|AK100024.1| Oryza sativa (japonica cultivar-group) cDNA clon... 285 7e-74
3dbj|AK058282.1| Oryza sativa (japonica cultivar-group) cDNA clon... 285 7e-74
4gb|AY106172.1| Zea mays PCO060652 mRNA sequence 139 1e-29
5dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 90 9e-15
6dbj|AP004235.4| Oryza sativa (japonica cultivar-group) genomic D... 90 9e-15
7dbj|AP003960.2| Oryza sativa (japonica cultivar-group) genomic D... 90 9e-15
8gb|AY020474.1| Oryza sativa microsatellite MRG2799 containing (G... 58 3e-05
9ref|NM_197788.1| Oryza sativa (japonica cultivar-group) hypothet... 42 1.8
10emb|AL121586.31|HSDJ477O4 Human DNA sequence from clone RP3-477O... 42 1.8
11gb|AC087599.14| Oryza sativa chromosome 10 BAC OSJNBa0057L21 gen... 42 1.8
12dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
13dbj|AK122019.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
14dbj|AK109505.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
15gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
16gb|AY307231.1| Corydoras sodalis voucher LBP434 NADH dehydrogena... 40 7.1
17gb|AE009373.1| Agrobacterium tumefaciens str. C58 linear chromos... 40 7.1
18gb|AE009247.1| Agrobacterium tumefaciens str. C58 linear chromos... 40 7.1
19gb|AE008366.1| Agrobacterium tumefaciens str. C58 linear chromos... 40 7.1
20gb|AE008240.1| Agrobacterium tumefaciens str. C58 linear chromos... 40 7.1
21gb|AF252827.5| Homo sapiens chromosome 8 clone RP11-166E20 map q... 40 7.1
22gb|AF228660.5| Homo sapiens chromosome 8 clone RP11-37N22 map q2... 40 7.1
23emb|AL670399.4| Mouse DNA sequence from clone RP23-263M10 on chr... 40 7.1
24emb|AL928651.13| Mouse DNA sequence from clone RP23-167A19 on ch... 40 7.1
25emb|AL832425.1|HSM803733 Homo sapiens mRNA; cDNA DKFZp762P042 (f... 40 7.1
26ref|NM_001039963.1| Pan troglodytes cytospin A (LOC458713), mRNA 40 7.1
27gb|AC154127.2| Ornithorhynchus anatinus BAC clone OABb-20A1 from... 40 7.1
28ref|NM_015330.1| Homo sapiens KIAA0376 protein (KIAA0376), mRNA 40 7.1
29dbj|AK097129.1| Homo sapiens cDNA FLJ39810 fis, clone SPLEN2009555 40 7.1
30gb|AC090964.10| Papio anubis clone rp41-177g23, complete sequence 40 7.1
31gb|AC090921.7| Homo sapiens chromosome 8, clone RP11-37N22, comp... 40 7.1
32gb|AC100871.2| Homo sapiens chromosome 8, clone RP11-959I15, com... 40 7.1
33gb|BC005093.1|BC005093 Homo sapiens, clone IMAGE:3843328, mRNA 40 7.1
34gb|AY884294.1| Pan troglodytes cytospin A mRNA, complete cds 40 7.1
35gb|AY884293.1| Homo sapiens cytospin A mRNA, complete cds 40 7.1
36emb|CT476832.2| Pig DNA sequence from clone XX-BE284E13 on chrom... 40 7.1
37dbj|AB209022.1| Homo sapiens mRNA for KIAA0376 protein variant p... 40 7.1
38dbj|AP000354.1| Homo sapiens genomic DNA, chromosome 22q11.2, cl... 40 7.1 
>ref|XM_478636.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2195

 Score =  285 bits (144), Expect = 7e-74
 Identities = 367/441 (83%), Gaps = 3/441 (0%)
 Strand = Plus / Plus

                                                                        
Query: 83   ccagagagacccaagctgaagctgcttcctcgttccaagccaatcgaatcccctgcacca 142
            ||||||||||| ||| |||||||||||||||| ||||||||||||||  |  | | ||||
Sbjct: 878  ccagagagacctaagttgaagctgcttcctcgctccaagccaatcgaggcttcagaacca 937

                                                                        
Query: 143  tcacctacctatgttgaagagaagcaggtccttccggtccctgtgatagcgagtgtcatg 202
            || |||  ||||||||||||||||||||| | || ||| || ||| | |||| |    ||
Sbjct: 938  tctcctgtctatgttgaagagaagcaggtgcatcaggttccagtggtcgcgaatactgtg 997

                                                                        
Query: 203  caggttgaggttgttcatgaagtgcgccagaatgtgatcgtagctaaaatgggagtggca 262
            |||||||| ||| ||||||| |||| |||||||||  | | | |||||   ||||| |||
Sbjct: 998  caggttgacgttattcatgatgtgcaccagaatgttgtagcacctaaagcaggagtagca 1057

                                                                        
Query: 263  ggggcagatgctgaaagcagggcaaccgtggagcgaccacggctgaatctgaaacctcgc 322
            ||||||||||||||  || |||||   ||||||||||||||  ||||||||||||| |||
Sbjct: 1058 ggggcagatgctgagggccgggca---gtggagcgaccacgattgaatctgaaaccccgc 1114

                                                                        
Query: 323  tctaatacagtgggtcagtctggtgaaagtgctgcgaaggagaggccatccctctttggt 382
            || ||| |||| || ||||||| |||||||||| | ||||| |||| |||||||||||||
Sbjct: 1115 tccaatgcagtaggacagtctgatgaaagtgctccaaaggaaaggcaatccctctttggt 1174

                                                                        
Query: 383  ggtgctcggccccgggaacaagttctcagagatcgtggtgtggatgctttggcaagtgac 442
            || ||||||||| ||||||||||||||||||| |||||  | |||||||| |||||||||
Sbjct: 1175 ggagctcggcccagggaacaagttctcagagagcgtggaatagatgctttagcaagtgac 1234

                                                                        
Query: 443  cttgagaacacctctccagttggcaggtcaaaaaatgagtttgcnaaggtcgagcagaag 502
            ||||| || || ||||||||||||||||| |||| ||| ||||| ||||  |||||||||
Sbjct: 1235 cttgataagacatctccagttggcaggtctaaaagtgaatttgcaaagggtgagcagaag 1294

                                 
Query: 503  gttgaagctatgaccactaac 523
            || ||||||||| ||| ||||
Sbjct: 1295 gtcgaagctatgtccattaac 1315



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                 
Query: 26  ccagtgaggcctgcatcgcatgaaggcagggttgggga 63
           |||||||||||||| |||||||||||||||||||||||
Sbjct: 764 ccagtgaggcctgcgtcgcatgaaggcagggttgggga 801
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>dbj|AK100024.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146D04, full
            insert sequence
          Length = 2198

 Score =  285 bits (144), Expect = 7e-74
 Identities = 367/441 (83%), Gaps = 3/441 (0%)
 Strand = Plus / Plus

                                                                        
Query: 83   ccagagagacccaagctgaagctgcttcctcgttccaagccaatcgaatcccctgcacca 142
            ||||||||||| ||| |||||||||||||||| ||||||||||||||  |  | | ||||
Sbjct: 879  ccagagagacctaagttgaagctgcttcctcgctccaagccaatcgaggcttcagaacca 938

                                                                        
Query: 143  tcacctacctatgttgaagagaagcaggtccttccggtccctgtgatagcgagtgtcatg 202
            || |||  ||||||||||||||||||||| | || ||| || ||| | |||| |    ||
Sbjct: 939  tctcctgtctatgttgaagagaagcaggtgcatcaggttccagtggtcgcgaatactgtg 998

                                                                        
Query: 203  caggttgaggttgttcatgaagtgcgccagaatgtgatcgtagctaaaatgggagtggca 262
            |||||||| ||| ||||||| |||| |||||||||  | | | |||||   ||||| |||
Sbjct: 999  caggttgacgttattcatgatgtgcaccagaatgttgtagcacctaaagcaggagtagca 1058

                                                                        
Query: 263  ggggcagatgctgaaagcagggcaaccgtggagcgaccacggctgaatctgaaacctcgc 322
            ||||||||||||||  || |||||   ||||||||||||||  ||||||||||||| |||
Sbjct: 1059 ggggcagatgctgagggccgggca---gtggagcgaccacgattgaatctgaaaccccgc 1115

                                                                        
Query: 323  tctaatacagtgggtcagtctggtgaaagtgctgcgaaggagaggccatccctctttggt 382
            || ||| |||| || ||||||| |||||||||| | ||||| |||| |||||||||||||
Sbjct: 1116 tccaatgcagtaggacagtctgatgaaagtgctccaaaggaaaggcaatccctctttggt 1175

                                                                        
Query: 383  ggtgctcggccccgggaacaagttctcagagatcgtggtgtggatgctttggcaagtgac 442
            || ||||||||| ||||||||||||||||||| |||||  | |||||||| |||||||||
Sbjct: 1176 ggagctcggcccagggaacaagttctcagagagcgtggaatagatgctttagcaagtgac 1235

                                                                        
Query: 443  cttgagaacacctctccagttggcaggtcaaaaaatgagtttgcnaaggtcgagcagaag 502
            ||||| || || ||||||||||||||||| |||| ||| ||||| ||||  |||||||||
Sbjct: 1236 cttgataagacatctccagttggcaggtctaaaagtgaatttgcaaagggtgagcagaag 1295

                                 
Query: 503  gttgaagctatgaccactaac 523
            || ||||||||| ||| ||||
Sbjct: 1296 gtcgaagctatgtccattaac 1316



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                 
Query: 26  ccagtgaggcctgcatcgcatgaaggcagggttgggga 63
           |||||||||||||| |||||||||||||||||||||||
Sbjct: 765 ccagtgaggcctgcgtcgcatgaaggcagggttgggga 802
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>dbj|AK058282.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D06, full
           insert sequence
          Length = 1394

 Score =  285 bits (144), Expect = 7e-74
 Identities = 367/441 (83%), Gaps = 3/441 (0%)
 Strand = Plus / Plus

                                                                       
Query: 83  ccagagagacccaagctgaagctgcttcctcgttccaagccaatcgaatcccctgcacca 142
           ||||||||||| ||| |||||||||||||||| ||||||||||||||  |  | | ||||
Sbjct: 137 ccagagagacctaagttgaagctgcttcctcgctccaagccaatcgaggcttcagaacca 196

                                                                       
Query: 143 tcacctacctatgttgaagagaagcaggtccttccggtccctgtgatagcgagtgtcatg 202
           || |||  ||||||||||||||||||||| | || ||| || ||| | |||| |    ||
Sbjct: 197 tctcctgtctatgttgaagagaagcaggtgcatcaggttccagtggtcgcgaatactgtg 256

                                                                       
Query: 203 caggttgaggttgttcatgaagtgcgccagaatgtgatcgtagctaaaatgggagtggca 262
           |||||||| ||| ||||||| |||| |||||||||  | | | |||||   ||||| |||
Sbjct: 257 caggttgacgttattcatgatgtgcaccagaatgttgtagcacctaaagcaggagtagca 316

                                                                       
Query: 263 ggggcagatgctgaaagcagggcaaccgtggagcgaccacggctgaatctgaaacctcgc 322
           ||||||||||||||  || |||||   ||||||||||||||  ||||||||||||| |||
Sbjct: 317 ggggcagatgctgagggccgggca---gtggagcgaccacgattgaatctgaaaccccgc 373

                                                                       
Query: 323 tctaatacagtgggtcagtctggtgaaagtgctgcgaaggagaggccatccctctttggt 382
           || ||| |||| || ||||||| |||||||||| | ||||| |||| |||||||||||||
Sbjct: 374 tccaatgcagtaggacagtctgatgaaagtgctccaaaggaaaggcaatccctctttggt 433

                                                                       
Query: 383 ggtgctcggccccgggaacaagttctcagagatcgtggtgtggatgctttggcaagtgac 442
           || ||||||||| ||||||||||||||||||| |||||  | |||||||| |||||||||
Sbjct: 434 ggagctcggcccagggaacaagttctcagagagcgtggaatagatgctttagcaagtgac 493

                                                                       
Query: 443 cttgagaacacctctccagttggcaggtcaaaaaatgagtttgcnaaggtcgagcagaag 502
           ||||| || || ||||||||||||||||| |||| ||| ||||| ||||  |||||||||
Sbjct: 494 cttgataagacatctccagttggcaggtctaaaagtgaatttgcaaagggtgagcagaag 553

                                
Query: 503 gttgaagctatgaccactaac 523
           || ||||||||| ||| ||||
Sbjct: 554 gtcgaagctatgtccattaac 574



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                
Query: 26 ccagtgaggcctgcatcgcatgaaggcagggttgggga 63
          |||||||||||||| |||||||||||||||||||||||
Sbjct: 23 ccagtgaggcctgcgtcgcatgaaggcagggttgggga 60
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>gb|AY106172.1| Zea mays PCO060652 mRNA sequence
          Length = 1055

 Score =  139 bits (70), Expect = 1e-29
 Identities = 126/145 (86%)
 Strand = Plus / Plus

                                                                       
Query: 367 gccatccctctttggtggtgctcggccccgggaacaagttctcagagatcgtggtgtgga 426
           |||||||||||||||||||||||| ||||| ||||||||||||| ||| ||||| |||||
Sbjct: 21  gccatccctctttggtggtgctcgcccccgtgaacaagttctcaaagaacgtggagtgga 80

                                                                       
Query: 427 tgctttggcaagtgaccttgagaacacctctccagttggcaggtcaaaaaatgagtttgc 486
           || |||||| ||||| ||||||   |  || |||||||||||||| |||  ||| |||||
Sbjct: 81  tgttttggccagtgatcttgagcggatttcaccagttggcaggtctaaaggtgaatttgc 140

                                    
Query: 487 naaggtcgagcagaaggttgaagct 511
            ||||||||||||||||||||||||
Sbjct: 141 aaaggtcgagcagaaggttgaagct 165
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 128/155 (82%), Gaps = 3/155 (1%)
 Strand = Plus / Plus

                                                                            
Query: 201      tgcaggttgaggttgttcatgaagtgcgccagaatgtgatcgtagctaaaatgggagtgg 260
                |||||||||| ||| ||||||| |||| |||||||||  | | | |||||   ||||| |
Sbjct: 21577165 tgcaggttgacgttattcatgatgtgcaccagaatgttgtagcacctaaagcaggagtag 21577224

                                                                            
Query: 261      caggggcagatgctgaaagcagggcaaccgtggagcgaccacggctgaatctgaaacctc 320
                ||||||||||||||||  || |||||   ||||||||||||||  ||||||||||||| |
Sbjct: 21577225 caggggcagatgctgagggccgggca---gtggagcgaccacgattgaatctgaaacccc 21577281

                                                   
Query: 321      gctctaatacagtgggtcagtctggtgaaagtgct 355
                |||| ||| |||| || ||||||| ||||||||||
Sbjct: 21577282 gctccaatgcagtaggacagtctgatgaaagtgct 21577316



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 77/89 (86%)
 Strand = Plus / Plus

                                                                            
Query: 83       ccagagagacccaagctgaagctgcttcctcgttccaagccaatcgaatcccctgcacca 142
                ||||||||||| ||| |||||||||||||||| ||||||||||||||  |  | | ||||
Sbjct: 21576816 ccagagagacctaagttgaagctgcttcctcgctccaagccaatcgaggcttcagaacca 21576875

                                             
Query: 143      tcacctacctatgttgaagagaagcaggt 171
                || |||  |||||||||||||||||||||
Sbjct: 21576876 tctcctgtctatgttgaagagaagcaggt 21576904



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 59/67 (88%)
 Strand = Plus / Plus

                                                                            
Query: 404      gttctcagagatcgtggtgtggatgctttggcaagtgaccttgagaacacctctccagtt 463
                ||||||||||| |||||  | |||||||| |||||||||||||| || || |||||||||
Sbjct: 21578421 gttctcagagagcgtggaatagatgctttagcaagtgaccttgataagacatctccagtt 21578480

                       
Query: 464      ggcaggt 470
                |||||||
Sbjct: 21578481 ggcaggt 21578487



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                      
Query: 26       ccagtgaggcctgcatcgcatgaaggcagggttgggga 63
                |||||||||||||| |||||||||||||||||||||||
Sbjct: 21576702 ccagtgaggcctgcgtcgcatgaaggcagggttgggga 21576739



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                         
Query: 365      aggccatccctctttggtggtgctcggccccgggaacaagt 405
                |||| ||||||||||||||| ||||||||| ||||||||||
Sbjct: 21578252 aggcaatccctctttggtggagctcggcccagggaacaagt 21578292



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                          
Query: 466      caggtcaaaaaatgagtttgcnaaggtcgagcagaaggttgaagctatgaccactaac 523
                |||||| |||| ||| ||||| ||||  ||||||||||| ||||||||| ||| ||||
Sbjct: 21579029 caggtctaaaagtgaatttgcaaagggtgagcagaaggtcgaagctatgtccattaac 21579086
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>dbj|AP004235.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0006G05
          Length = 56865

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 128/155 (82%), Gaps = 3/155 (1%)
 Strand = Plus / Plus

                                                                         
Query: 201   tgcaggttgaggttgttcatgaagtgcgccagaatgtgatcgtagctaaaatgggagtgg 260
             |||||||||| ||| ||||||| |||| |||||||||  | | | |||||   ||||| |
Sbjct: 23539 tgcaggttgacgttattcatgatgtgcaccagaatgttgtagcacctaaagcaggagtag 23598

                                                                         
Query: 261   caggggcagatgctgaaagcagggcaaccgtggagcgaccacggctgaatctgaaacctc 320
             ||||||||||||||||  || |||||   ||||||||||||||  ||||||||||||| |
Sbjct: 23599 caggggcagatgctgagggccgggca---gtggagcgaccacgattgaatctgaaacccc 23655

                                                
Query: 321   gctctaatacagtgggtcagtctggtgaaagtgct 355
             |||| ||| |||| || ||||||| ||||||||||
Sbjct: 23656 gctccaatgcagtaggacagtctgatgaaagtgct 23690



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 77/89 (86%)
 Strand = Plus / Plus

                                                                         
Query: 83    ccagagagacccaagctgaagctgcttcctcgttccaagccaatcgaatcccctgcacca 142
             ||||||||||| ||| |||||||||||||||| ||||||||||||||  |  | | ||||
Sbjct: 23190 ccagagagacctaagttgaagctgcttcctcgctccaagccaatcgaggcttcagaacca 23249

                                          
Query: 143   tcacctacctatgttgaagagaagcaggt 171
             || |||  |||||||||||||||||||||
Sbjct: 23250 tctcctgtctatgttgaagagaagcaggt 23278



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 59/67 (88%)
 Strand = Plus / Plus

                                                                         
Query: 404   gttctcagagatcgtggtgtggatgctttggcaagtgaccttgagaacacctctccagtt 463
             ||||||||||| |||||  | |||||||| |||||||||||||| || || |||||||||
Sbjct: 24795 gttctcagagagcgtggaatagatgctttagcaagtgaccttgataagacatctccagtt 24854

                    
Query: 464   ggcaggt 470
             |||||||
Sbjct: 24855 ggcaggt 24861



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                   
Query: 26    ccagtgaggcctgcatcgcatgaaggcagggttgggga 63
             |||||||||||||| |||||||||||||||||||||||
Sbjct: 23076 ccagtgaggcctgcgtcgcatgaaggcagggttgggga 23113



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                      
Query: 365   aggccatccctctttggtggtgctcggccccgggaacaagt 405
             |||| ||||||||||||||| ||||||||| ||||||||||
Sbjct: 24626 aggcaatccctctttggtggagctcggcccagggaacaagt 24666



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                       
Query: 466   caggtcaaaaaatgagtttgcnaaggtcgagcagaaggttgaagctatgaccactaac 523
             |||||| |||| ||| ||||| ||||  ||||||||||| ||||||||| ||| ||||
Sbjct: 25403 caggtctaaaagtgaatttgcaaagggtgagcagaaggtcgaagctatgtccattaac 25460
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>dbj|AP003960.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1612_A04
          Length = 124833

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 128/155 (82%), Gaps = 3/155 (1%)
 Strand = Plus / Plus

                                                                        
Query: 201  tgcaggttgaggttgttcatgaagtgcgccagaatgtgatcgtagctaaaatgggagtgg 260
            |||||||||| ||| ||||||| |||| |||||||||  | | | |||||   ||||| |
Sbjct: 7621 tgcaggttgacgttattcatgatgtgcaccagaatgttgtagcacctaaagcaggagtag 7680

                                                                        
Query: 261  caggggcagatgctgaaagcagggcaaccgtggagcgaccacggctgaatctgaaacctc 320
            ||||||||||||||||  || |||||   ||||||||||||||  ||||||||||||| |
Sbjct: 7681 caggggcagatgctgagggccgggca---gtggagcgaccacgattgaatctgaaacccc 7737

                                               
Query: 321  gctctaatacagtgggtcagtctggtgaaagtgct 355
            |||| ||| |||| || ||||||| ||||||||||
Sbjct: 7738 gctccaatgcagtaggacagtctgatgaaagtgct 7772



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 77/89 (86%)
 Strand = Plus / Plus

                                                                        
Query: 83   ccagagagacccaagctgaagctgcttcctcgttccaagccaatcgaatcccctgcacca 142
            ||||||||||| ||| |||||||||||||||| ||||||||||||||  |  | | ||||
Sbjct: 7272 ccagagagacctaagttgaagctgcttcctcgctccaagccaatcgaggcttcagaacca 7331

                                         
Query: 143  tcacctacctatgttgaagagaagcaggt 171
            || |||  |||||||||||||||||||||
Sbjct: 7332 tctcctgtctatgttgaagagaagcaggt 7360



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 59/67 (88%)
 Strand = Plus / Plus

                                                                        
Query: 404  gttctcagagatcgtggtgtggatgctttggcaagtgaccttgagaacacctctccagtt 463
            ||||||||||| |||||  | |||||||| |||||||||||||| || || |||||||||
Sbjct: 8877 gttctcagagagcgtggaatagatgctttagcaagtgaccttgataagacatctccagtt 8936

                   
Query: 464  ggcaggt 470
            |||||||
Sbjct: 8937 ggcaggt 8943



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                  
Query: 26   ccagtgaggcctgcatcgcatgaaggcagggttgggga 63
            |||||||||||||| |||||||||||||||||||||||
Sbjct: 7158 ccagtgaggcctgcgtcgcatgaaggcagggttgggga 7195



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                     
Query: 365  aggccatccctctttggtggtgctcggccccgggaacaagt 405
            |||| ||||||||||||||| ||||||||| ||||||||||
Sbjct: 8708 aggcaatccctctttggtggagctcggcccagggaacaagt 8748



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                      
Query: 466  caggtcaaaaaatgagtttgcnaaggtcgagcagaaggttgaagctatgaccactaac 523
            |||||| |||| ||| ||||| ||||  ||||||||||| ||||||||| ||| ||||
Sbjct: 9485 caggtctaaaagtgaatttgcaaagggtgagcagaaggtcgaagctatgtccattaac 9542
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>gb|AY020474.1| Oryza sativa microsatellite MRG2799 containing (GA)X19, genomic
           sequence
          Length = 238

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                    
Query: 365 aggccatccctctttggtggtgctcggccccgggaacaagt 405
           |||| ||||||||||||||| ||||||||| ||||||||||
Sbjct: 188 aggcaatccctctttggtggagctcggcccagggaacaagt 148
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>ref|NM_197788.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0057L21.26), mRNA
          Length = 588

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 292 ggagcgaccacggctgaatctgaaacctcgctc 324
           ||||||| |||| |||||||||||| |||||||
Sbjct: 504 ggagcgagcacgactgaatctgaaatctcgctc 536
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>emb|AL121586.31|HSDJ477O4 Human DNA sequence from clone RP3-477O4 on chromosome 20 Contains a novel
              gene, the GDF5 gene for growth differentiation factor 5,
              the CEP2 gene for centrosomal protein 2, two novel genes, a
              pseudogene similar to sialyltransferase proteins, the
              C20orf173 gene for chromosome 20 open reading frame 173,
              the SDBCAG84 gene for serologically defined breast cancer
              antigen 84, the RPL36P4 locus for ribosomal protein L36
              pseudogene 4, the 3' end of the FER1L4 gene for fer-1-like
              4 (C. elegans) and three CpG islands, complete sequence
          Length = 151903

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 46     tgaaggcagggttggggaagg 66
              |||||||||||||||||||||
Sbjct: 132040 tgaaggcagggttggggaagg 132060
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>gb|AC087599.14| Oryza sativa chromosome 10 BAC OSJNBa0057L21 genomic sequence, complete
              sequence
          Length = 183046

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 292    ggagcgaccacggctgaatctgaaacctcgctc 324
              ||||||| |||| |||||||||||| |||||||
Sbjct: 126464 ggagcgagcacgactgaatctgaaatctcgctc 126432
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 292      ggagcgaccacggctgaatctgaaacctcgctc 324
                ||||||| |||| |||||||||||| |||||||
Sbjct: 21881857 ggagcgagcacgactgaatctgaaatctcgctc 21881889
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>dbj|AK122019.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033111M24, full
           insert sequence
          Length = 2830

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 292 ggagcgaccacggctgaatctgaaacctcgctc 324
           ||||||| |||| |||||||||||| |||||||
Sbjct: 727 ggagcgagcacgactgaatctgaaatctcgctc 759
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>dbj|AK109505.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-A02, full
           insert sequence
          Length = 2257

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 292 ggagcgaccacggctgaatctgaaacctcgctc 324
           ||||||| |||| |||||||||||| |||||||
Sbjct: 671 ggagcgagcacgactgaatctgaaatctcgctc 703
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 292      ggagcgaccacggctgaatctgaaacctcgctc 324
                ||||||| |||| |||||||||||| |||||||
Sbjct: 21893520 ggagcgagcacgactgaatctgaaatctcgctc 21893552
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>gb|AY307231.1| Corydoras sodalis voucher LBP434 NADH dehydrogenase subunit 4 (ND4)
           gene, partial cds; tRNA-His gene, complete sequence; and
           tRNA-Ser gene, partial sequence; mitochondrial
          Length = 790

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 179 gtccctgtgatagcgagtgt 198
           ||||||||||||||||||||
Sbjct: 485 gtccctgtgatagcgagtgt 466
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>gb|AE009373.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 143 of
             187 of the complete sequence
          Length = 13358

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 413   gatcgtggtgtggatgcttt 432
             ||||||||||||||||||||
Sbjct: 11883 gatcgtggtgtggatgcttt 11902
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>gb|AE009247.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 17 of
            187 of the complete sequence
          Length = 12792

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 413  gatcgtggtgtggatgcttt 432
            ||||||||||||||||||||
Sbjct: 1430 gatcgtggtgtggatgcttt 1449
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>gb|AE008366.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 170 of
             187 of the complete sequence
          Length = 12745

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 413   gatcgtggtgtggatgcttt 432
             ||||||||||||||||||||
Sbjct: 11317 gatcgtggtgtggatgcttt 11298
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>gb|AE008240.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 44 of 187
             of the complete sequence
          Length = 14945

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 413   gatcgtggtgtggatgcttt 432
             ||||||||||||||||||||
Sbjct: 13468 gatcgtggtgtggatgcttt 13449
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>gb|AF252827.5| Homo sapiens chromosome 8 clone RP11-166E20 map q24.13, complete sequence
          Length = 165347

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 48     aaggcagggttggggaaggg 67
              ||||||||||||||||||||
Sbjct: 151536 aaggcagggttggggaaggg 151517
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>gb|AF228660.5| Homo sapiens chromosome 8 clone RP11-37N22 map q24.13, complete
             sequence
          Length = 182016

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 48    aaggcagggttggggaaggg 67
             ||||||||||||||||||||
Sbjct: 10982 aaggcagggttggggaaggg 10963
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>emb|AL670399.4| Mouse DNA sequence from clone RP23-263M10 on chromosome 11 Contains the
              3' end of the Atp2a3 gene for ubiquitous Ca++ transporting
              ATPase, the P2rx1 and P2rx5 genes for purinergic receptor
              P2X ligand-gated ion channel 1 and 5, 111 novel genes, the
              Camkk1 gene for calcium/calmodulin-dependent protein kinase
              kinase 1 alpha, the Itgae gene for epithelial-associated
              integrin alpha E, the Gsg2 gene for germ cell-specific gene
              2 protein, the gene for a novel protein similar to human
              tax interacting protein 1, the Ctns gene for nephropathic
              cystinosis protein and five CpG islands, complete sequence
          Length = 224037

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 427    tgctttggcaagtgaccttg 446
              ||||||||||||||||||||
Sbjct: 216591 tgctttggcaagtgaccttg 216610
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>emb|AL928651.13| Mouse DNA sequence from clone RP23-167A19 on chromosome 4 Contains a
             3-hydroxyisobutyrate dehydrogenase, mitochondrial
             precursor (Hibadh) pseudogene and a CpG island, complete
             sequence
          Length = 157883

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 438   gtgaccttgagaacacctct 457
             ||||||||||||||||||||
Sbjct: 46147 gtgaccttgagaacacctct 46128
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>emb|AL832425.1|HSM803733 Homo sapiens mRNA; cDNA DKFZp762P042 (from clone DKFZp762P042)
          Length = 6255

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 258 tggcaggggcagatgctgaa 277
           ||||||||||||||||||||
Sbjct: 498 tggcaggggcagatgctgaa 479
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>ref|NM_001039963.1| Pan troglodytes cytospin A (LOC458713), mRNA
          Length = 4459

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 258 tggcaggggcagatgctgaa 277
           ||||||||||||||||||||
Sbjct: 413 tggcaggggcagatgctgaa 394
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>gb|AC154127.2| Ornithorhynchus anatinus BAC clone OABb-20A1 from chromosome unknown,
             complete sequence
          Length = 188107

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 429   ctttggcaagtgaccttgag 448
             ||||||||||||||||||||
Sbjct: 84656 ctttggcaagtgaccttgag 84675
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>ref|NM_015330.1| Homo sapiens KIAA0376 protein (KIAA0376), mRNA
          Length = 6255

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 258 tggcaggggcagatgctgaa 277
           ||||||||||||||||||||
Sbjct: 498 tggcaggggcagatgctgaa 479
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>dbj|AK097129.1| Homo sapiens cDNA FLJ39810 fis, clone SPLEN2009555
          Length = 2558

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 258 tggcaggggcagatgctgaa 277
           ||||||||||||||||||||
Sbjct: 463 tggcaggggcagatgctgaa 444
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>gb|AC090964.10| Papio anubis clone rp41-177g23, complete sequence
          Length = 182747

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 258   tggcaggggcagatgctgaa 277
             ||||||||||||||||||||
Sbjct: 71297 tggcaggggcagatgctgaa 71316
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>gb|AC090921.7| Homo sapiens chromosome 8, clone RP11-37N22, complete sequence
          Length = 182041

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 48     aaggcagggttggggaaggg 67
              ||||||||||||||||||||
Sbjct: 171059 aaggcagggttggggaaggg 171078
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>gb|AC100871.2| Homo sapiens chromosome 8, clone RP11-959I15, complete sequence
          Length = 215314

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    aaggcagggttggggaaggg 67
             ||||||||||||||||||||
Sbjct: 67005 aaggcagggttggggaaggg 67024
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>gb|BC005093.1|BC005093 Homo sapiens, clone IMAGE:3843328, mRNA
          Length = 2275

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 258 tggcaggggcagatgctgaa 277
           ||||||||||||||||||||
Sbjct: 497 tggcaggggcagatgctgaa 478
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>gb|AY884294.1| Pan troglodytes cytospin A mRNA, complete cds
          Length = 4459

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 258 tggcaggggcagatgctgaa 277
           ||||||||||||||||||||
Sbjct: 413 tggcaggggcagatgctgaa 394
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>gb|AY884293.1| Homo sapiens cytospin A mRNA, complete cds
          Length = 4450

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 258 tggcaggggcagatgctgaa 277
           ||||||||||||||||||||
Sbjct: 403 tggcaggggcagatgctgaa 384
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>emb|CT476832.2| Pig DNA sequence from clone XX-BE284E13 on chromosome 11, complete
              sequence
          Length = 180778

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 152    tatgttgaagagaagcaggt 171
              ||||||||||||||||||||
Sbjct: 162887 tatgttgaagagaagcaggt 162906
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>dbj|AB209022.1| Homo sapiens mRNA for KIAA0376 protein variant protein
          Length = 6203

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 258 tggcaggggcagatgctgaa 277
           ||||||||||||||||||||
Sbjct: 498 tggcaggggcagatgctgaa 479
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>dbj|AP000354.1| Homo sapiens genomic DNA, chromosome 22q11.2, clone KB1674E1
          Length = 164756

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 258   tggcaggggcagatgctgaa 277
             ||||||||||||||||||||
Sbjct: 91959 tggcaggggcagatgctgaa 91940


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,978,664
Number of Sequences: 3902068
Number of extensions: 3978664
Number of successful extensions: 71494
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71362
Number of HSP's gapped (non-prelim): 119
length of query: 523
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 500
effective length of database: 17,143,297,704
effective search space: 8571648852000
effective search space used: 8571648852000
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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