| Clone Name | bags31n10 |
|---|---|
| Clone Library Name | barley_pub |
>SEC3_YEAST (P33332) Exocyst complex component SEC3 (Protein PSL1)| Length = 1336 Score = 32.7 bits (73), Expect = 0.43 Identities = 12/33 (36%), Positives = 24/33 (72%) Frame = +3 Query: 123 LRIFNLKLRHMREDISSIESRNNGLEMQSVNNK 221 L +F +++ + DI ++ES++NGL+++S N K Sbjct: 692 LSLFLMEMSNFSNDIENVESQDNGLQVESANKK 724
>DYNA_DROME (P13496) 150 kDa dynein-associated polypeptide (DP-150) (DAP-150)| (Protein glued) Length = 1265 Score = 31.2 bits (69), Expect = 1.2 Identities = 16/55 (29%), Positives = 31/55 (56%) Frame = +3 Query: 63 EEVLQGIDAASATIDDMDEWLRIFNLKLRHMREDISSIESRNNGLEMQSVNNKGL 227 +EVL+ DAA TI D D+ + F ++ + + ++ + RN+ E +S+ + L Sbjct: 520 KEVLRERDAAIETIYDRDQTIVKFRELVQKLNDQLTELRDRNSSNEKESLQDPSL 574
>EXOC1_CAEEL (Q20678) Probable exocyst complex component 1 (Exocyst complex| component Sec3) Length = 848 Score = 30.4 bits (67), Expect = 2.1 Identities = 17/68 (25%), Positives = 37/68 (54%) Frame = +3 Query: 24 ANVYQLLESEPLIEEVLQGIDAASATIDDMDEWLRIFNLKLRHMREDISSIESRNNGLEM 203 AN+ +++SE + ++L IDAA ++ +++ L + L +R I IE +++ + Sbjct: 204 ANINSMMDSENSVNQLLSSIDAALTGVESVEKELDRCDDILAFVRNSIELIEEKDSLSVV 263 Query: 204 QSVNNKGL 227 + N + L Sbjct: 264 ERKNKQRL 271
>SPTB2_MOUSE (Q62261) Spectrin beta chain, brain 1 (Spectrin, non-erythroid beta| chain 1) (Beta-II spectrin) (Fodrin beta chain) Length = 2363 Score = 29.3 bits (64), Expect = 4.7 Identities = 17/65 (26%), Positives = 30/65 (46%) Frame = +3 Query: 36 QLLESEPLIEEVLQGIDAASATIDDMDEWLRIFNLKLRHMREDISSIESRNNGLEMQSVN 215 Q L+ + ++ DA ID+ ++WL N+++ ED+ I+ R LE + N Sbjct: 843 QALQDTLALYKMFSEADACELWIDEKEQWLN--NMQIPEKLEDLEVIQHRFESLEPEMNN 900 Query: 216 NKGLV 230 V Sbjct: 901 QASRV 905
>SYE_METJA (Q58772) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA| ligase) (GluRS) Length = 553 Score = 29.3 bits (64), Expect = 4.7 Identities = 17/59 (28%), Positives = 31/59 (52%) Frame = +3 Query: 45 ESEPLIEEVLQGIDAASATIDDMDEWLRIFNLKLRHMREDISSIESRNNGLEMQSVNNK 221 E P++E+V++ ++ S +DE KL + ED+ E + GLE+ +V +K Sbjct: 42 EVMPIVEKVVEEVNKLS-----LDE----IKKKLEELGEDVKKKEKKEKGLELPNVKDK 91
>SPTB2_HUMAN (Q01082) Spectrin beta chain, brain 1 (Spectrin, non-erythroid beta| chain 1) (Beta-II spectrin) (Fodrin beta chain) Length = 2364 Score = 29.3 bits (64), Expect = 4.7 Identities = 17/65 (26%), Positives = 30/65 (46%) Frame = +3 Query: 36 QLLESEPLIEEVLQGIDAASATIDDMDEWLRIFNLKLRHMREDISSIESRNNGLEMQSVN 215 Q L+ + ++ DA ID+ ++WL N+++ ED+ I+ R LE + N Sbjct: 843 QALQDTLALYKMFSEADACELWIDEKEQWLN--NMQIPEKLEDLEVIQHRFESLEPEMNN 900 Query: 216 NKGLV 230 V Sbjct: 901 QASRV 905
>RAD50_METKA (Q8TXI4) DNA double-strand break repair rad50 ATPase| Length = 876 Score = 28.5 bits (62), Expect = 8.1 Identities = 13/47 (27%), Positives = 25/47 (53%) Frame = +3 Query: 60 IEEVLQGIDAASATIDDMDEWLRIFNLKLRHMREDISSIESRNNGLE 200 +E L+G+ + D ++E L K +R+ +S ++ R NG+E Sbjct: 642 VERNLEGLRERYGSEDRLEEELESVEKKYERVRDKLSEVKGRLNGME 688 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,349,068 Number of Sequences: 219361 Number of extensions: 1087324 Number of successful extensions: 2683 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 2641 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2683 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)