ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags32c06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AOC4_ARATH (Q93ZC5) Allene oxide cyclase 4, chloroplast precurso... 229 4e-60
2AOC3_ARATH (Q9LS01) Allene oxide cyclase 3, chloroplast precurso... 227 3e-59
3AOC1_ARATH (Q9LS03) Allene oxide cyclase 1, chloroplast precurso... 217 2e-56
4AOC2_ARATH (Q9LS02) Allene oxide cyclase 2, chloroplast precurso... 214 2e-55
5TWF1_XENLA (Q68F50) Twinfilin-1 31 3.8
6PHLA1_HUMAN (Q8WV24) Pleckstrin homology-like domain family A me... 30 8.5
7CTX80_EUPOC (Q9N9X3) Ciliary WD repeat-containing protein ctxp80 30 8.5

>AOC4_ARATH (Q93ZC5) Allene oxide cyclase 4, chloroplast precursor (EC|
           5.3.99.6)
          Length = 254

 Score =  229 bits (585), Expect = 4e-60
 Identities = 111/174 (63%), Positives = 132/174 (75%), Gaps = 1/174 (0%)
 Frame = +2

Query: 8   VQELHVYELNERDRESPAYLRLSANXSQNALGDLVPFTNKVYNGSLDKRIGITAGICILI 187
           +QEL+VYE NE DR SPA L+L     Q  LGDLVPFTNK+Y G L KRIGITAG+C+LI
Sbjct: 81  IQELNVYEFNEGDRNSPAVLKLGKKPDQLCLGDLVPFTNKLYTGDLTKRIGITAGLCVLI 140

Query: 188 QHVPERNGDRYEAIYSMYFGDYGHISLQGPYLTYEESYLAVTGGSGVFEGVYGQVKLNQI 367
           QHVPE+ GDR+EA YS YFGDYGHIS+QGPYLTYE+++LA+TGGSGVFEG YGQVKL Q+
Sbjct: 141 QHVPEKKGDRFEASYSFYFGDYGHISVQGPYLTYEDTFLAITGGSGVFEGAYGQVKLRQL 200

Query: 368 VFPFKIFYTFYLKGI-PDLPKELLCXXXXXXXXXXXXXAAKATEPHACLNNFTD 526
           V+P K+FYTFYLKG+  DLP EL                A+AT+P A + NFT+
Sbjct: 201 VYPTKLFYTFYLKGVAADLPVELTGKHVEPSKEVKPAAEAQATQPGATIANFTN 254



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>AOC3_ARATH (Q9LS01) Allene oxide cyclase 3, chloroplast precursor (EC|
           5.3.99.6)
          Length = 258

 Score =  227 bits (578), Expect = 3e-59
 Identities = 108/174 (62%), Positives = 133/174 (76%), Gaps = 1/174 (0%)
 Frame = +2

Query: 8   VQELHVYELNERDRESPAYLRLSANXSQNALGDLVPFTNKVYNGSLDKRIGITAGICILI 187
           +QEL+VYELNE DR SPA L+L    ++  LGDLVPFTNK+Y G L KR+GITAG+C+LI
Sbjct: 85  IQELNVYELNEGDRNSPAVLKLGKKPTELCLGDLVPFTNKLYTGDLKKRVGITAGLCVLI 144

Query: 188 QHVPERNGDRYEAIYSMYFGDYGHISLQGPYLTYEESYLAVTGGSGVFEGVYGQVKLNQI 367
           QHVPE++GDR+EA YS YFGDYGH+S+QG YLTYE+++LAVTGGSG+FEG YGQVKL Q+
Sbjct: 145 QHVPEKSGDRFEASYSFYFGDYGHLSVQGQYLTYEDTFLAVTGGSGIFEGAYGQVKLRQL 204

Query: 368 VFPFKIFYTFYLKGIP-DLPKELLCXXXXXXXXXXXXXAAKATEPHACLNNFTD 526
           V+P K+FYTFYLKG+  DLP EL                AKA EP   ++NFT+
Sbjct: 205 VYPTKLFYTFYLKGLANDLPLELTGTAVTPSKDVKPAPEAKAMEPSGVISNFTN 258



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>AOC1_ARATH (Q9LS03) Allene oxide cyclase 1, chloroplast precursor (EC|
           5.3.99.6) (Early-responsive to dehydration 12 protein)
          Length = 254

 Score =  217 bits (553), Expect = 2e-56
 Identities = 104/174 (59%), Positives = 133/174 (76%), Gaps = 1/174 (0%)
 Frame = +2

Query: 8   VQELHVYELNERDRESPAYLRLSANXSQNALGDLVPFTNKVYNGSLDKRIGITAGICILI 187
           VQEL VYE+N+ DR SP  L+ +A   +  LGDLVPFTNK+Y G L KR+GITAG+C++I
Sbjct: 82  VQELSVYEINDLDRHSPKILK-NAFSFRFGLGDLVPFTNKLYTGDLKKRVGITAGLCVVI 140

Query: 188 QHVPERNGDRYEAIYSMYFGDYGHISLQGPYLTYEESYLAVTGGSGVFEGVYGQVKLNQI 367
           +HVPE+NGDR+EA YS YFGDYGH+S+QGPYLTYE+S+LA+TGG+G+FEG YGQVKL Q+
Sbjct: 141 EHVPEKNGDRFEATYSFYFGDYGHLSVQGPYLTYEDSFLAITGGAGIFEGAYGQVKLQQL 200

Query: 368 VFPFKIFYTFYLKGIP-DLPKELLCXXXXXXXXXXXXXAAKATEPHACLNNFTD 526
           V+P K+FYTFYLKG+  DLP EL+               AKA +P   ++NFT+
Sbjct: 201 VYPTKLFYTFYLKGLANDLPLELIGTPVPPSKDVEPAPEAKALKPSGVVSNFTN 254



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>AOC2_ARATH (Q9LS02) Allene oxide cyclase 2, chloroplast precursor (EC|
           5.3.99.6)
          Length = 253

 Score =  214 bits (544), Expect = 2e-55
 Identities = 103/174 (59%), Positives = 130/174 (74%), Gaps = 1/174 (0%)
 Frame = +2

Query: 8   VQELHVYELNERDRESPAYLRLSANXSQNALGDLVPFTNKVYNGSLDKRIGITAGICILI 187
           VQEL VYE+NE DR SP  L+ +A      LGDLVPFTNK+Y G L KR+GITAG+C++I
Sbjct: 81  VQELSVYEINELDRHSPKILK-NAFSLMFGLGDLVPFTNKLYTGDLKKRVGITAGLCVVI 139

Query: 188 QHVPERNGDRYEAIYSMYFGDYGHISLQGPYLTYEESYLAVTGGSGVFEGVYGQVKLNQI 367
           +HVPE+ G+R+EA YS YFGDYGH+S+QGPYLTYE+S+LA+TGG+G+FEG YGQVKL Q+
Sbjct: 140 EHVPEKKGERFEATYSFYFGDYGHLSVQGPYLTYEDSFLAITGGAGIFEGAYGQVKLQQL 199

Query: 368 VFPFKIFYTFYLKGIP-DLPKELLCXXXXXXXXXXXXXAAKATEPHACLNNFTD 526
           V+P K+FYTFYLKG+  DLP EL                AKA EP   ++N+T+
Sbjct: 200 VYPTKLFYTFYLKGLANDLPLELTGTPVPPSKDIEPAPEAKALEPSGVISNYTN 253



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>TWF1_XENLA (Q68F50) Twinfilin-1|
          Length = 350

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 14/60 (23%), Positives = 27/60 (45%)
 Frame = +2

Query: 176 CILIQHVPERNGDRYEAIYSMYFGDYGHISLQGPYLTYEESYLAVTGGSGVFEGVYGQVK 355
           C ++  +  +N   +E I+  +  DY H+  +  Y     +     GG  + E ++G VK
Sbjct: 67  CYILYRLDSQNAQGFEWIFIAWSPDYSHVRQKMLYAATRATVKKEFGGGHIKEEIFGTVK 126



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>PHLA1_HUMAN (Q8WV24) Pleckstrin homology-like domain family A member 1 (T-cell|
           death-associated gene 51 protein) (Apoptosis-associated
           nuclear protein) (Proline- and histidine-rich protein)
           (Proline- and glutamine-rich protein) (PQ-rich protein)
          Length = 259

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 18/60 (30%), Positives = 22/60 (36%), Gaps = 9/60 (15%)
 Frame = +1

Query: 352 QAQPDRLPLQDLLHFLPQGHPGPAKGAALHARP---------AFPHRRANARRQGHRATR 504
           Q QP   P    LH  P  HP P      H  P           PH + +++  GHR  R
Sbjct: 194 QPQPQPKPQPQQLHPYPHPHPHPHSHPHSHPHPHPHPHPHQIPHPHPQPHSQPHGHRLLR 253



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>CTX80_EUPOC (Q9N9X3) Ciliary WD repeat-containing protein ctxp80|
          Length = 716

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = +1

Query: 184 DPARAGAQRRPLRGHLQHVLR 246
           +PARAGA    LRGH +HV+R
Sbjct: 670 NPARAGATPVSLRGHSEHVVR 690


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,585,956
Number of Sequences: 219361
Number of extensions: 1164003
Number of successful extensions: 3197
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3193
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6427774254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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