ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags32b15 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_188277.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 951 Score = 509 bits (257), Expect = e-141 Identities = 543/637 (85%), Gaps = 1/637 (0%) Strand = Plus / Plus Query: 10 tgatgacgacgacggcgaaggctggctcgcaacacatggggtgcaagcatcagagtcgaa 69 |||||| || ||||| ||||||||||| || |||||||| |||||||||||| || | Sbjct: 303 tgatgatgaggacggtgaaggctggcttgccacacatggagtgcaagcatcaaagcaaga 362 Query: 70 agaggaggaagacattccgtctatggatacattggacatagggaaagtcgaagagatcaa 129 ||||||||||||||| || || |||||||||||||| ||||||||| |||| ||| || Sbjct: 363 agaggaggaagacataccatcgatggatacattggatatagggaaaactgaagggataaa 422 Query: 130 atctatcccctcgtactttggtgctagtgaaaagccagatgaggaggaggatatacctga 189 ||||| ||||| || || ||||| || | ||| | || || |||||||||||||| || Sbjct: 423 gtctattccctcatatttcagtgctggtaagaaggctgaagaagaggaggatataccaga 482 Query: 190 catggacacctatgaagacacaggagatcattcaacagctacccctcagccttcatattt 249 ||||||||| ||||||||| |||| || ||||| |||||| |||| ||||||||||| Sbjct: 483 catggacacttatgaagactcagggaatgattcagtggctaccgctcaaccttcatattt 542 Query: 250 tgtcgcagaagagcctgatgatgacaacattcttcttactagaacatatgatgtcagcat 309 |||||||||||||||||| ||||||||||| |||| |||||| |||||||| || ||||| Sbjct: 543 tgtcgcagaagagcctgaagatgacaacatccttcgtactaggacatatgacgttagcat 602 Query: 310 cacatatgacaagtactatcaaactccacgtgtctggcttacaggctatgatgaggcaag 369 |||||||||||| || || ||||| ||||||||||||||||| || ||||||||| |||| Sbjct: 603 cacatatgacaaatattaccaaaccccacgtgtctggcttaccggatatgatgagtcaag 662 Query: 370 aatgccattaaagcctgaccttgtgtttcaagatatcagtcaagaccatgcacacaaaac 429 ||||||| |||||||||| ||||||||| |||||||||| ||||| ||||||| || || Sbjct: 663 aatgccactaaagcctgaacttgtgtttgaagatatcagccaagatcatgcacggaagac 722 Query: 430 ggtgactatcgaagaccacccacacttgttagcaggacagcacgccctcagtgcatcctt 489 ||||||||| |||||||| || ||||||| |||||| |||| | | ||||||||||| | Sbjct: 723 ggtgactattgaagaccatcctcacttgtcagcaggcaagcatg-cttcagtgcatccat 781 Query: 490 gcaagcatgctgctgtgatgaaaaagatcattgatgttatgatgtctcaaggaggcacac 549 |||| ||||||||||||||||||||||||||||||||| | ||||||||||||| || Sbjct: 782 gcaaacatgctgctgtgatgaaaaagatcattgatgttctaatgtctcaaggagttgaac 841 Query: 550 cagaagttgacaagtaccttttcatatttctaaaattcatggcttctgtcatacccacca 609 ||||||||||||||||||||||||||||| | || || ||||| || ||||||||||| | Sbjct: 842 cagaagttgacaagtaccttttcatatttttgaagtttatggcctcagtcatacccacta 901 Query: 610 ttgagtatgattacaccatggactttgatctaggcag 646 |||| ||||| ||||| |||||||| ||||| ||||| Sbjct: 902 ttgaatatgactacactatggacttcgatctgggcag 938
>dbj|AK067737.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120F11, full insert sequence Length = 1375 Score = 502 bits (253), Expect = e-139 Identities = 542/637 (85%), Gaps = 1/637 (0%) Strand = Plus / Plus Query: 10 tgatgacgacgacggcgaaggctggctcgcaacacatggggtgcaagcatcagagtcgaa 69 |||||| || ||||| ||||||||||| || |||||||| |||||||||||| || | Sbjct: 460 tgatgatgaggacggtgaaggctggcttgccacacatggagtgcaagcatcaaagcaaga 519 Query: 70 agaggaggaagacattccgtctatggatacattggacatagggaaagtcgaagagatcaa 129 ||||||||||||||| || || |||||||||||||| ||||||||| |||| ||| || Sbjct: 520 agaggaggaagacataccatcgatggatacattggatatagggaaaactgaagggataaa 579 Query: 130 atctatcccctcgtactttggtgctagtgaaaagccagatgaggaggaggatatacctga 189 ||||| ||||| || || ||||| || | ||| | || || |||||||||||||| || Sbjct: 580 gtctattccctcatatttcagtgctggtaagaaggctgaagaagaggaggatataccaga 639 Query: 190 catggacacctatgaagacacaggagatcattcaacagctacccctcagccttcatattt 249 ||||||||| ||||||||| |||| || ||||| |||||| |||| ||||||||||| Sbjct: 640 catggacacttatgaagactcagggaatgattcagtggctaccgctcaaccttcatattt 699 Query: 250 tgtcgcagaagagcctgatgatgacaacattcttcttactagaacatatgatgtcagcat 309 |||||||||||||||||| ||||||||||| |||| |||||| |||||||| || ||||| Sbjct: 700 tgtcgcagaagagcctgaagatgacaacatccttcgtactaggacatatgacgttagcat 759 Query: 310 cacatatgacaagtactatcaaactccacgtgtctggcttacaggctatgatgaggcaag 369 |||||||||||| || || ||||| ||||||||||||||||| || ||||||||| |||| Sbjct: 760 cacatatgacaaatattaccaaaccccacgtgtctggcttaccggatatgatgagtcaag 819 Query: 370 aatgccattaaagcctgaccttgtgtttcaagatatcagtcaagaccatgcacacaaaac 429 ||||||| |||||||||| ||||||||| |||||||||| ||||| ||||||| || || Sbjct: 820 aatgccactaaagcctgaacttgtgtttgaagatatcagccaagatcatgcacggaagac 879 Query: 430 ggtgactatcgaagaccacccacacttgttagcaggacagcacgccctcagtgcatcctt 489 ||||||||| |||||||| || ||||||| |||||| |||| | | ||||||||||| | Sbjct: 880 ggtgactattgaagaccatcctcacttgtcagcaggcaagcatg-cttcagtgcatccat 938 Query: 490 gcaagcatgctgctgtgatgaaaaagatcattgatgttatgatgtctcaaggaggcacac 549 |||| ||||||||||||||||||||||||||||||||| | ||||||||||||| || Sbjct: 939 gcaaacatgctgctgtgatgaaaaagatcattgatgttctaatgtctcaaggagttgaac 998 Query: 550 cagaagttgacaagtaccttttcatatttctaaaattcatggcttctgtcatacccacca 609 |||||||||||||| |||||||||||||| | || || ||||| || ||||||||||| | Sbjct: 999 cagaagttgacaagcaccttttcatatttttgaagtttatggcctcagtcatacccacta 1058 Query: 610 ttgagtatgattacaccatggactttgatctaggcag 646 |||| ||||| ||||| |||||||| ||||| ||||| Sbjct: 1059 ttgaatatgactacactatggacttcgatctgggcag 1095
>ref|NM_197739.1| Oryza sativa (japonica cultivar-group) autophagocytosis protein AUT1-like (OSJNBa0042H09.14), mRNA Length = 726 Score = 347 bits (175), Expect = 3e-92 Identities = 353/411 (85%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 10 tgatgacgacgacggcgaaggctggctcgcaacacatggggtgcaagcatcagagtcgaa 69 |||||| || ||||| ||||||||||| || |||||||| |||||||||||| || | | Sbjct: 303 tgatgatgaggacggtgaaggctggcttgccacacatggagtgcaagcatcaaagccaga 362 Query: 70 agaggaggaagacattccgtctatggatacattggacatagggaaagtcgaagagatcaa 129 ||||||||||||||| || || |||||||||||||| ||||||||| |||| ||| || Sbjct: 363 agaggaggaagacataccatcgatggatacattggatatagggaaaactgaagggataaa 422 Query: 130 atctatcccctcgtactttggtgctagtgaaaagccagatgaggaggaggatatacctga 189 ||||| ||||| ||||| ||||| || | ||| | || || |||||||||||||| || Sbjct: 423 ctctattccctcatacttcagtgctggtaagaaggctgaagaagaggaggatataccaga 482 Query: 190 catggacacctatgaagacacaggagatcattcaacagctacccctcagccttcatattt 249 ||||||||| |||||||||||||| || ||||| |||||| |||| ||||||||||| Sbjct: 483 catggacacttatgaagacacagggaatgattcagtggctaccgctcaaccttcatattt 542 Query: 250 tgtcgcagaagagcctgatgatgacaacattcttcttactagaacatatgatgtcagcat 309 |||||||||||||||||| ||||||||||| |||| |||||| |||||||| || ||||| Sbjct: 543 tgtcgcagaagagcctgaagatgacaacatccttcgtactaggacatatgacgttagcat 602 Query: 310 cacatatgacaagtactatcaaactccacgtgtctggcttacaggctatgatgaggcaag 369 ||||||||| || || || ||||| ||||||||||||||||| || ||||||||| |||| Sbjct: 603 cacatatgataaatattaccaaaccccacgtgtctggcttaccggatatgatgagtcaag 662 Query: 370 aatgccattaaagcctgaccttgtgtttcaagatatcagtcaagaccatgc 420 |||||||||||||||||| ||||||||| |||||||||| ||||||||||| Sbjct: 663 aatgccattaaagcctgaacttgtgtttgaagatatcag-caagaccatgc 712
>gb|AY107670.1| Zea mays PCO096794 mRNA sequence Length = 1350 Score = 262 bits (132), Expect = 1e-66 Identities = 343/412 (83%), Gaps = 1/412 (0%) Strand = Plus / Plus Query: 242 tcatattttgtcgcagaagagcctgatgatgacaacattcttcttactagaacatatgat 301 ||||| ||| |||||||||| || || |||||||||||||||| ||| |||||||||||| Sbjct: 670 tcatactttatcgcagaagaaccagaagatgacaacattcttcataccagaacatatgat 729 Query: 302 gtcagcatcacatatgacaagtactatcaaactccacgtgtctggcttacaggctatgat 361 || ||||| || |||||||||||||| |||||||||||||||||||| || || ||||| Sbjct: 730 gttagcataacgtatgacaagtactaccaaactccacgtgtctggctaactggatatgac 789 Query: 362 gaggcaagaatgccattaaagcctgaccttgtgtttcaagatatcagtcaagaccatgca 421 ||| ||||||||||||||| |||||| ||||||||| |||| ||||| |||||||| ||| Sbjct: 790 gagtcaagaatgccattaatgcctgaacttgtgtttgaagacatcagccaagaccacgca 849 Query: 422 cacaaaacggtgactatcgaagaccacccacacttgttagcaggacagcacgccctcagt 481 | |||||||||||||| || ||||| || ||||| || || || |||| | | ||||| Sbjct: 850 cgaaaaacggtgactattgaggaccatcctcacttattggctgggaagcatg-catcagt 908 Query: 482 gcatccttgcaagcatgctgctgtgatgaaaaagatcattgatgttatgatgtctcaagg 541 ||| || ||||| ||||| |||||||||||||||||||| || ||| ||||| || Sbjct: 909 gcacccatgcaaacatgcagctgtgatgaaaaagatcatcgacgttccaatgtcgggggg 968 Query: 542 aggcacaccagaagttgacaagtaccttttcatatttctaaaattcatggcttctgtcat 601 || ||||||||||||||||||||||||||||||| | |||||||| || | ||||| Sbjct: 969 agtggaaccagaagttgacaagtaccttttcatatttttgaaattcatagcgacagtcat 1028 Query: 602 acccaccattgagtatgattacaccatggactttgatctaggcagtccaagc 653 ||| || |||||||| ||||| || |||||| | || || |||||| ||||| Sbjct: 1029 accgactattgagtacgattatacaatggacgtcgaccttggcagtacaagc 1080 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Plus Query: 23 ggcgaaggctggctcgcaacacatggggtgcaagcatcagagtcgaaagaggaggaagac 82 |||||||||||||| ||||||||||| |||||||||||| || | |||||||||||||| Sbjct: 457 ggcgaaggctggcttgcaacacatggagtgcaagcatcaaagacagaagaggaggaagac 516 Query: 83 attccgtctatggatacattggacataggga 113 ||||| |||||||| || ||||||||||||| Sbjct: 517 attccctctatggacaccttggacataggga 547 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 170 gaggaggaggatatacctgacatggacacctatgaagacacagg 213 |||||||| ||||||||||||||||| || |||||||||||||| Sbjct: 601 gaggaggaagatatacctgacatggatacttatgaagacacagg 644
>gb|AY701318.1| Nicotiana benthamiana autophagy protein ATG3 mRNA, partial cds Length = 493 Score = 133 bits (67), Expect = 8e-28 Identities = 187/227 (82%) Strand = Plus / Plus Query: 227 gctacccctcagccttcatattttgtcgcagaagagcctgatgatgacaacattcttctt 286 ||||||| |||| || ||||| |||| || | ||||||||||||||||||||||| Sbjct: 67 gctacccttcagactacatatcttgtggctcatgagcctgatgatgacaacattctaaga 126 Query: 287 actagaacatatgatgtcagcatcacatatgacaagtactatcaaactccacgtgtctgg 346 || ||||||||||| |||||||||| |||||||||||||||||||| || ||||| ||| Sbjct: 127 acacgaacatatgatatcagcatcacgtatgacaagtactatcaaacgcctcgtgtatgg 186 Query: 347 cttacaggctatgatgaggcaagaatgccattaaagcctgaccttgtgtttcaagatatc 406 || || || ||||||||| |||| |||| ||| | || || ||||| || | ||| || Sbjct: 187 ctcactggatatgatgagtcaaggatgcttttacaaccagagcttgtacttgaggatgtc 246 Query: 407 agtcaagaccatgcacacaaaacggtgactatcgaagaccacccaca 453 |||||||||||||||| |||||||||||| || ||||| || ||||| Sbjct: 247 agtcaagaccatgcacgcaaaacggtgaccattgaagatcatccaca 293 Score = 48.1 bits (24), Expect = 0.037 Identities = 72/88 (81%) Strand = Plus / Plus Query: 552 gaagttgacaagtaccttttcatatttctaaaattcatggcttctgtcatacccaccatt 611 ||||||||||||||| | ||| |||| | || || |||||||| || || || || ||| Sbjct: 388 gaagttgacaagtacttcttcctattcttgaagtttatggcttccgttattccaacaatt 447 Query: 612 gagtatgattacaccatggactttgatc 639 || || || ||||||||||||||||||| Sbjct: 448 gaatacgactacaccatggactttgatc 475
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 127 bits (64), Expect = 5e-26 Identities = 119/136 (87%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 430 ggtgactatcgaagaccacccacacttgttagcaggacagcacgccctcagtgcatcctt 489 ||||||||| |||||||| || ||||||| |||||| |||| || ||||||||||| | Sbjct: 5413357 ggtgactattgaagaccatcctcacttgtcagcaggcaagcatgct-tcagtgcatccat 5413299 Query: 490 gcaagcatgctgctgtgatgaaaaagatcattgatgttatgatgtctcaaggaggcacac 549 |||| ||||||||||||||||||||||||||||||||| | ||||||||||||| || Sbjct: 5413298 gcaaacatgctgctgtgatgaaaaagatcattgatgttctaatgtctcaaggagttgaac 5413239 Query: 550 cagaagttgacaagta 565 |||||||||||||||| Sbjct: 5413238 cagaagttgacaagta 5413223 Score = 107 bits (54), Expect = 5e-20 Identities = 78/86 (90%) Strand = Plus / Minus Query: 227 gctacccctcagccttcatattttgtcgcagaagagcctgatgatgacaacattcttctt 286 |||||| |||| ||||||||||||||||||||||||||||| ||||||||||| |||| | Sbjct: 5414581 gctaccgctcaaccttcatattttgtcgcagaagagcctgaagatgacaacatccttcgt 5414522 Query: 287 actagaacatatgatgtcagcatcac 312 ||||| |||||||| || |||||||| Sbjct: 5414521 actaggacatatgacgttagcatcac 5414496 Score = 89.7 bits (45), Expect = 1e-14 Identities = 120/145 (82%) Strand = Plus / Minus Query: 69 aagaggaggaagacattccgtctatggatacattggacatagggaaagtcgaagagatca 128 |||||||||||||||| || || |||||||||||||| ||||||||| |||| ||| | Sbjct: 5414839 aagaggaggaagacataccatcgatggatacattggatatagggaaaactgaagggataa 5414780 Query: 129 aatctatcccctcgtactttggtgctagtgaaaagccagatgaggaggaggatatacctg 188 | ||||| ||||| || || ||||| || | ||| | || || |||||||||||||| | Sbjct: 5414779 agtctattccctcatatttcagtgctggtaagaaggctgaagaagaggaggatataccag 5414720 Query: 189 acatggacacctatgaagacacagg 213 |||||||||| ||||||||| |||| Sbjct: 5414719 acatggacacttatgaagactcagg 5414695 Score = 73.8 bits (37), Expect = 7e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 366 caagaatgccattaaagcctgaccttgtgtttcaagatatcagtcaagaccatgcac 422 ||||||||||| |||||||||| ||||||||| |||||||||| ||||| ||||||| Sbjct: 5413904 caagaatgccactaaagcctgaacttgtgtttgaagatatcagccaagatcatgcac 5413848 Score = 73.8 bits (37), Expect = 7e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 558 gacaagtaccttttcatatttctaaaattcatggcttctgtcatacccaccattgagtat 617 |||| |||||||||||||||| | || || ||||| || ||||||||||| ||||| ||| Sbjct: 5413127 gacaggtaccttttcatatttttgaagtttatggcctcagtcatacccactattgaatat 5413068 Query: 618 gattacaccatggactttgatctaggcag 646 || ||||| |||||||| ||||| ||||| Sbjct: 5413067 gactacactatggacttcgatctgggcag 5413039 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 313 atatgacaagtactatcaaactccacgtgtctggcttacaggctatgatgagg 365 ||||||||| || || ||||| ||||||||||||||||| || |||||||||| Sbjct: 5414037 atatgacaaatattaccaaaccccacgtgtctggcttaccggatatgatgagg 5413985 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Minus Query: 10 tgatgacgacgacggcgaaggctggctcgcaacacatggggtgcaag 56 |||||| || ||||| ||||||||||| || |||||||| ||||||| Sbjct: 5414987 tgatgatgaggacggtgaaggctggcttgccacacatggagtgcaag 5414941
>dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1015E06 Length = 164583 Score = 127 bits (64), Expect = 5e-26 Identities = 119/136 (87%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 430 ggtgactatcgaagaccacccacacttgttagcaggacagcacgccctcagtgcatcctt 489 ||||||||| |||||||| || ||||||| |||||| |||| || ||||||||||| | Sbjct: 10197 ggtgactattgaagaccatcctcacttgtcagcaggcaagcatgct-tcagtgcatccat 10139 Query: 490 gcaagcatgctgctgtgatgaaaaagatcattgatgttatgatgtctcaaggaggcacac 549 |||| ||||||||||||||||||||||||||||||||| | ||||||||||||| || Sbjct: 10138 gcaaacatgctgctgtgatgaaaaagatcattgatgttctaatgtctcaaggagttgaac 10079 Query: 550 cagaagttgacaagta 565 |||||||||||||||| Sbjct: 10078 cagaagttgacaagta 10063 Score = 107 bits (54), Expect = 5e-20 Identities = 78/86 (90%) Strand = Plus / Minus Query: 227 gctacccctcagccttcatattttgtcgcagaagagcctgatgatgacaacattcttctt 286 |||||| |||| ||||||||||||||||||||||||||||| ||||||||||| |||| | Sbjct: 11421 gctaccgctcaaccttcatattttgtcgcagaagagcctgaagatgacaacatccttcgt 11362 Query: 287 actagaacatatgatgtcagcatcac 312 ||||| |||||||| || |||||||| Sbjct: 11361 actaggacatatgacgttagcatcac 11336 Score = 89.7 bits (45), Expect = 1e-14 Identities = 120/145 (82%) Strand = Plus / Minus Query: 69 aagaggaggaagacattccgtctatggatacattggacatagggaaagtcgaagagatca 128 |||||||||||||||| || || |||||||||||||| ||||||||| |||| ||| | Sbjct: 11679 aagaggaggaagacataccatcgatggatacattggatatagggaaaactgaagggataa 11620 Query: 129 aatctatcccctcgtactttggtgctagtgaaaagccagatgaggaggaggatatacctg 188 | ||||| ||||| || || ||||| || | ||| | || || |||||||||||||| | Sbjct: 11619 agtctattccctcatatttcagtgctggtaagaaggctgaagaagaggaggatataccag 11560 Query: 189 acatggacacctatgaagacacagg 213 |||||||||| ||||||||| |||| Sbjct: 11559 acatggacacttatgaagactcagg 11535 Score = 73.8 bits (37), Expect = 7e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 366 caagaatgccattaaagcctgaccttgtgtttcaagatatcagtcaagaccatgcac 422 ||||||||||| |||||||||| ||||||||| |||||||||| ||||| ||||||| Sbjct: 10744 caagaatgccactaaagcctgaacttgtgtttgaagatatcagccaagatcatgcac 10688 Score = 73.8 bits (37), Expect = 7e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 558 gacaagtaccttttcatatttctaaaattcatggcttctgtcatacccaccattgagtat 617 |||| |||||||||||||||| | || || ||||| || ||||||||||| ||||| ||| Sbjct: 9967 gacaggtaccttttcatatttttgaagtttatggcctcagtcatacccactattgaatat 9908 Query: 618 gattacaccatggactttgatctaggcag 646 || ||||| |||||||| ||||| ||||| Sbjct: 9907 gactacactatggacttcgatctgggcag 9879 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 313 atatgacaagtactatcaaactccacgtgtctggcttacaggctatgatgagg 365 ||||||||| || || ||||| ||||||||||||||||| || |||||||||| Sbjct: 10877 atatgacaaatattaccaaaccccacgtgtctggcttaccggatatgatgagg 10825 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Minus Query: 10 tgatgacgacgacggcgaaggctggctcgcaacacatggggtgcaag 56 |||||| || ||||| ||||||||||| || |||||||| ||||||| Sbjct: 11827 tgatgatgaggacggtgaaggctggcttgccacacatggagtgcaag 11781
>gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 genomic sequence, complete sequence Length = 144191 Score = 111 bits (56), Expect = 3e-21 Identities = 117/136 (86%), Gaps = 1/136 (0%) Strand = Plus / Plus Query: 430 ggtgactatcgaagaccacccacacttgttagcaggacagcacgccctcagtgcatcctt 489 ||||||||| |||||||| || ||||||| |||||| |||| || ||||||||||| | Sbjct: 48865 ggtgactattgaagaccatcctcacttgtcagcaggcaagcatgct-tcagtgcatccat 48923 Query: 490 gcaagcatgctgctgtgatgaaaaagatcattgatgttatgatgtctcaaggaggcacac 549 |||| || |||||||||||||||||||||||||||||| | ||||||| ||||| || Sbjct: 48924 gcaaacacgctgctgtgatgaaaaagatcattgatgttctaatgtctcgaggagttgaac 48983 Query: 550 cagaagttgacaagta 565 |||||||||||||||| Sbjct: 48984 cagaagttgacaagta 48999 Score = 107 bits (54), Expect = 5e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 227 gctacccctcagccttcatattttgtcgcagaagagcctgatgatgacaacattcttctt 286 |||||| |||| ||||||||||||||||||||||||||||| ||||||||||| |||| | Sbjct: 47701 gctaccgctcaaccttcatattttgtcgcagaagagcctgaagatgacaacatccttcgt 47760 Query: 287 actagaacatatgatgtcagcatcac 312 ||||| |||||||| || |||||||| Sbjct: 47761 actaggacatatgacgttagcatcac 47786 Score = 105 bits (53), Expect = 2e-19 Identities = 122/145 (84%) Strand = Plus / Plus Query: 69 aagaggaggaagacattccgtctatggatacattggacatagggaaagtcgaagagatca 128 |||||||||||||||| || || |||||||||||||| ||||||||| |||| ||| | Sbjct: 47443 aagaggaggaagacataccatcgatggatacattggatatagggaaaactgaagggataa 47502 Query: 129 aatctatcccctcgtactttggtgctagtgaaaagccagatgaggaggaggatatacctg 188 | ||||| ||||| ||||| ||||| || | ||| | || || |||||||||||||| | Sbjct: 47503 actctattccctcatacttcagtgctggtaagaaggctgaagaagaggaggatataccag 47562 Query: 189 acatggacacctatgaagacacagg 213 |||||||||| |||||||||||||| Sbjct: 47563 acatggacacttatgaagacacagg 47587 Score = 77.8 bits (39), Expect = 4e-11 Identities = 52/55 (94%), Gaps = 1/55 (1%) Strand = Plus / Plus Query: 366 caagaatgccattaaagcctgaccttgtgtttcaagatatcagtcaagaccatgc 420 |||||||||||||||||||||| ||||||||| |||||||||| ||||||||||| Sbjct: 48298 caagaatgccattaaagcctgaacttgtgtttgaagatatcag-caagaccatgc 48351 Score = 65.9 bits (33), Expect = 2e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 558 gacaagtaccttttcatatttctaaaattcatggcttctgtcatacccaccattgagtat 617 |||| ||| |||||||||||| | || || ||||| | ||||||||||| ||||| ||| Sbjct: 49095 gacaggtaacttttcatatttttgaagtttatggccccagtcatacccactattgaatat 49154 Query: 618 gattacaccatggactttgatctaggcagtccaagca 654 || ||||| |||||||| ||||| |||||| |||||| Sbjct: 49155 gactacactatggacttcgatctgggcagtacaagca 49191 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 329 caaactccacgtgtctggcttacaggctatgatgagg 365 ||||| ||||||||||||||||| || |||||||||| Sbjct: 48181 caaaccccacgtgtctggcttaccggatatgatgagg 48217 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 10 tgatgacgacgacggcgaaggctggctcgcaacacatggggtgcaag 56 |||||| || ||||| ||||||||||| || |||||||| ||||||| Sbjct: 47296 tgatgatgaggacggtgaaggctggcttgccacacatggagtgcaag 47342
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 111 bits (56), Expect = 3e-21 Identities = 117/136 (86%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 430 ggtgactatcgaagaccacccacacttgttagcaggacagcacgccctcagtgcatcctt 489 ||||||||| |||||||| || ||||||| |||||| |||| || ||||||||||| | Sbjct: 21561192 ggtgactattgaagaccatcctcacttgtcagcaggcaagcatgct-tcagtgcatccat 21561134 Query: 490 gcaagcatgctgctgtgatgaaaaagatcattgatgttatgatgtctcaaggaggcacac 549 |||| || |||||||||||||||||||||||||||||| | ||||||| ||||| || Sbjct: 21561133 gcaaacacgctgctgtgatgaaaaagatcattgatgttctaatgtctcgaggagttgaac 21561074 Query: 550 cagaagttgacaagta 565 |||||||||||||||| Sbjct: 21561073 cagaagttgacaagta 21561058 Score = 107 bits (54), Expect = 5e-20 Identities = 78/86 (90%) Strand = Plus / Minus Query: 227 gctacccctcagccttcatattttgtcgcagaagagcctgatgatgacaacattcttctt 286 |||||| |||| ||||||||||||||||||||||||||||| ||||||||||| |||| | Sbjct: 21562356 gctaccgctcaaccttcatattttgtcgcagaagagcctgaagatgacaacatccttcgt 21562297 Query: 287 actagaacatatgatgtcagcatcac 312 ||||| |||||||| || |||||||| Sbjct: 21562296 actaggacatatgacgttagcatcac 21562271 Score = 105 bits (53), Expect = 2e-19 Identities = 122/145 (84%) Strand = Plus / Minus Query: 69 aagaggaggaagacattccgtctatggatacattggacatagggaaagtcgaagagatca 128 |||||||||||||||| || || |||||||||||||| ||||||||| |||| ||| | Sbjct: 21562614 aagaggaggaagacataccatcgatggatacattggatatagggaaaactgaagggataa 21562555 Query: 129 aatctatcccctcgtactttggtgctagtgaaaagccagatgaggaggaggatatacctg 188 | ||||| ||||| ||||| ||||| || | ||| | || || |||||||||||||| | Sbjct: 21562554 actctattccctcatacttcagtgctggtaagaaggctgaagaagaggaggatataccag 21562495 Query: 189 acatggacacctatgaagacacagg 213 |||||||||| |||||||||||||| Sbjct: 21562494 acatggacacttatgaagacacagg 21562470 Score = 77.8 bits (39), Expect = 4e-11 Identities = 52/55 (94%), Gaps = 1/55 (1%) Strand = Plus / Minus Query: 366 caagaatgccattaaagcctgaccttgtgtttcaagatatcagtcaagaccatgc 420 |||||||||||||||||||||| ||||||||| |||||||||| ||||||||||| Sbjct: 21561759 caagaatgccattaaagcctgaacttgtgtttgaagatatcag-caagaccatgc 21561706 Score = 65.9 bits (33), Expect = 2e-07 Identities = 81/97 (83%) Strand = Plus / Minus Query: 558 gacaagtaccttttcatatttctaaaattcatggcttctgtcatacccaccattgagtat 617 |||| ||| |||||||||||| | || || ||||| | ||||||||||| ||||| ||| Sbjct: 21560962 gacaggtaacttttcatatttttgaagtttatggccccagtcatacccactattgaatat 21560903 Query: 618 gattacaccatggactttgatctaggcagtccaagca 654 || ||||| |||||||| ||||| |||||| |||||| Sbjct: 21560902 gactacactatggacttcgatctgggcagtacaagca 21560866 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 329 caaactccacgtgtctggcttacaggctatgatgagg 365 ||||| ||||||||||||||||| || |||||||||| Sbjct: 21561876 caaaccccacgtgtctggcttaccggatatgatgagg 21561840 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Minus Query: 10 tgatgacgacgacggcgaaggctggctcgcaacacatggggtgcaag 56 |||||| || ||||| ||||||||||| || |||||||| ||||||| Sbjct: 21562761 tgatgatgaggacggtgaaggctggcttgccacacatggagtgcaag 21562715 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gatgatgacgacgacggcga 27 |||||||||||||||||||| Sbjct: 14114280 gatgatgacgacgacggcga 14114299
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 111 bits (56), Expect = 3e-21 Identities = 117/136 (86%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 430 ggtgactatcgaagaccacccacacttgttagcaggacagcacgccctcagtgcatcctt 489 ||||||||| |||||||| || ||||||| |||||| |||| || ||||||||||| | Sbjct: 21572855 ggtgactattgaagaccatcctcacttgtcagcaggcaagcatgct-tcagtgcatccat 21572797 Query: 490 gcaagcatgctgctgtgatgaaaaagatcattgatgttatgatgtctcaaggaggcacac 549 |||| || |||||||||||||||||||||||||||||| | ||||||| ||||| || Sbjct: 21572796 gcaaacacgctgctgtgatgaaaaagatcattgatgttctaatgtctcgaggagttgaac 21572737 Query: 550 cagaagttgacaagta 565 |||||||||||||||| Sbjct: 21572736 cagaagttgacaagta 21572721 Score = 107 bits (54), Expect = 5e-20 Identities = 78/86 (90%) Strand = Plus / Minus Query: 227 gctacccctcagccttcatattttgtcgcagaagagcctgatgatgacaacattcttctt 286 |||||| |||| ||||||||||||||||||||||||||||| ||||||||||| |||| | Sbjct: 21574019 gctaccgctcaaccttcatattttgtcgcagaagagcctgaagatgacaacatccttcgt 21573960 Query: 287 actagaacatatgatgtcagcatcac 312 ||||| |||||||| || |||||||| Sbjct: 21573959 actaggacatatgacgttagcatcac 21573934 Score = 105 bits (53), Expect = 2e-19 Identities = 122/145 (84%) Strand = Plus / Minus Query: 69 aagaggaggaagacattccgtctatggatacattggacatagggaaagtcgaagagatca 128 |||||||||||||||| || || |||||||||||||| ||||||||| |||| ||| | Sbjct: 21574277 aagaggaggaagacataccatcgatggatacattggatatagggaaaactgaagggataa 21574218 Query: 129 aatctatcccctcgtactttggtgctagtgaaaagccagatgaggaggaggatatacctg 188 | ||||| ||||| ||||| ||||| || | ||| | || || |||||||||||||| | Sbjct: 21574217 actctattccctcatacttcagtgctggtaagaaggctgaagaagaggaggatataccag 21574158 Query: 189 acatggacacctatgaagacacagg 213 |||||||||| |||||||||||||| Sbjct: 21574157 acatggacacttatgaagacacagg 21574133 Score = 77.8 bits (39), Expect = 4e-11 Identities = 52/55 (94%), Gaps = 1/55 (1%) Strand = Plus / Minus Query: 366 caagaatgccattaaagcctgaccttgtgtttcaagatatcagtcaagaccatgc 420 |||||||||||||||||||||| ||||||||| |||||||||| ||||||||||| Sbjct: 21573422 caagaatgccattaaagcctgaacttgtgtttgaagatatcag-caagaccatgc 21573369 Score = 65.9 bits (33), Expect = 2e-07 Identities = 81/97 (83%) Strand = Plus / Minus Query: 558 gacaagtaccttttcatatttctaaaattcatggcttctgtcatacccaccattgagtat 617 |||| ||| |||||||||||| | || || ||||| | ||||||||||| ||||| ||| Sbjct: 21572625 gacaggtaacttttcatatttttgaagtttatggccccagtcatacccactattgaatat 21572566 Query: 618 gattacaccatggactttgatctaggcagtccaagca 654 || ||||| |||||||| ||||| |||||| |||||| Sbjct: 21572565 gactacactatggacttcgatctgggcagtacaagca 21572529 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 329 caaactccacgtgtctggcttacaggctatgatgagg 365 ||||| ||||||||||||||||| || |||||||||| Sbjct: 21573539 caaaccccacgtgtctggcttaccggatatgatgagg 21573503 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Minus Query: 10 tgatgacgacgacggcgaaggctggctcgcaacacatggggtgcaag 56 |||||| || ||||| ||||||||||| || |||||||| ||||||| Sbjct: 21574424 tgatgatgaggacggtgaaggctggcttgccacacatggagtgcaag 21574378 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gatgatgacgacgacggcga 27 |||||||||||||||||||| Sbjct: 14122522 gatgatgacgacgacggcga 14122541
>gb|AY350711.1| Sisymbrium irio clone BAC Sio11E11, complete sequence Length = 95357 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 314 tatgacaagtactatcaaactccacgtgtctggcttacaggctatgatgagg 365 ||||||||||| ||||||||||| ||||| ||| | || ||||||||||||| Sbjct: 41905 tatgacaagtattatcaaactccccgtgtttggttgaccggctatgatgagg 41956 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 615 tatgattacaccatggactttgatct 640 ||||||||||| |||||||||||||| Sbjct: 42511 tatgattacacaatggactttgatct 42536 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 405 tcagtcaagaccatgcacacaaaacggt 432 |||||||||||||||||| |||||||| Sbjct: 42107 tcagtcaagaccatgcacgtaaaacggt 42134
>ref|NM_125543.2| Arabidopsis thaliana unknown protein AT5G61500 mRNA, complete cds Length = 1288 Score = 54.0 bits (27), Expect = 6e-04 Identities = 153/195 (78%) Strand = Plus / Plus Query: 263 cctgatgatgacaacattcttcttactagaacatatgatgtcagcatcacatatgacaag 322 |||||||| || |||||||| | ||| | ||||||||| ||||||| || ||||| ||| Sbjct: 687 cctgatgacgataacattctccgaactcggacatatgatctcagcataacgtatgataag 746 Query: 323 tactatcaaactccacgtgtctggcttacaggctatgatgaggcaagaatgccattaaag 382 || || |||||||| ||||| ||||| || || ||||||||| |||| |||| | | Sbjct: 747 tattaccaaactcctcgtgtttggctgaccggttatgatgagtcaaggatgctgctgcaa 806 Query: 383 cctgaccttgtgtttcaagatatcagtcaagaccatgcacacaaaacggtgactatcgaa 442 ||||| ||||| | | ||| | || ||||||||||| | |||||||| || |||||| Sbjct: 807 cctgaacttgtaatggaggatgttagccaagaccatgctcgtaaaacggtcacaatcgaa 866 Query: 443 gaccacccacacttg 457 || || ||||||||| Sbjct: 867 gatcatccacacttg 881 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Plus Query: 552 gaagttgacaagtaccttttcatatttctaaaattcatggcttctgtcatacccaccatt 611 ||||| ||||||||||| ||| | || | || |||||||| || || || || || ||| Sbjct: 972 gaagtcgacaagtacctcttcctgttcttgaagttcatggcatcagttattccaacaatt 1031 Query: 612 gagtatgattacaccatggactttgatct 640 ||||| |||||||| |||||||||||||| Sbjct: 1032 gagtacgattacacaatggactttgatct 1060
>gb|BT011893.1| Arabidopsis thaliana At5g61500 mRNA sequence Length = 939 Score = 54.0 bits (27), Expect = 6e-04 Identities = 153/195 (78%) Strand = Plus / Plus Query: 263 cctgatgatgacaacattcttcttactagaacatatgatgtcagcatcacatatgacaag 322 |||||||| || |||||||| | ||| | ||||||||| ||||||| || ||||| ||| Sbjct: 547 cctgatgacgataacattctccgaactcggacatatgatctcagcataacgtatgataag 606 Query: 323 tactatcaaactccacgtgtctggcttacaggctatgatgaggcaagaatgccattaaag 382 || || |||||||| ||||| ||||| || || ||||||||| |||| |||| | | Sbjct: 607 tattaccaaactcctcgtgtttggctgaccggttatgatgagtcaaggatgctgctgcaa 666 Query: 383 cctgaccttgtgtttcaagatatcagtcaagaccatgcacacaaaacggtgactatcgaa 442 ||||| ||||| | | ||| | || ||||||||||| | |||||||| || |||||| Sbjct: 667 cctgaacttgtaatggaggatgttagccaagaccatgctcgtaaaacggtcacaatcgaa 726 Query: 443 gaccacccacacttg 457 || || ||||||||| Sbjct: 727 gatcatccacacttg 741 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Plus Query: 552 gaagttgacaagtaccttttcatatttctaaaattcatggcttctgtcatacccaccatt 611 ||||| ||||||||||| ||| | || | || |||||||| || || || || || ||| Sbjct: 832 gaagtcgacaagtacctcttcctgttcttgaagttcatggcatcagttattccaacaatt 891 Query: 612 gagtatgattacaccatggactttgatct 640 ||||| |||||||| |||||||||||||| Sbjct: 892 gagtacgattacacaatggactttgatct 920
>emb|BX829994.1|CNS0A1FB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB52ZB02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1286 Score = 54.0 bits (27), Expect = 6e-04 Identities = 153/195 (78%) Strand = Plus / Plus Query: 263 cctgatgatgacaacattcttcttactagaacatatgatgtcagcatcacatatgacaag 322 |||||||| || |||||||| | ||| | ||||||||| ||||||| || ||||| ||| Sbjct: 668 cctgatgacgataacattctccgaactcggacatatgatctcagcataacgtatgataag 727 Query: 323 tactatcaaactccacgtgtctggcttacaggctatgatgaggcaagaatgccattaaag 382 || || |||||||| ||||| ||||| || || ||||||||| |||| |||| | | Sbjct: 728 tattaccaaactcctcgtgtttggctgaccggttatgatgagtcaaggatgctgctgcaa 787 Query: 383 cctgaccttgtgtttcaagatatcagtcaagaccatgcacacaaaacggtgactatcgaa 442 ||||| ||||| | | ||| | || ||||||||||| | |||||||| || |||||| Sbjct: 788 cctgaacttgtaatggaggatgttagccaagaccatgctcgtaaaacggtcacaatcgaa 847 Query: 443 gaccacccacacttg 457 || || ||||||||| Sbjct: 848 gatcatccacacttg 862 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Plus Query: 552 gaagttgacaagtaccttttcatatttctaaaattcatggcttctgtcatacccaccatt 611 ||||| ||||||||||| ||| | || | || |||||||| || || || || || ||| Sbjct: 953 gaagtcgacaagtacctcttcctgttcttgaagttcatggcatcagttattccaacaatt 1012 Query: 612 gagtatgattacaccatggactttgatct 640 ||||| |||||||| |||||||||||||| Sbjct: 1013 gagtacgattacacaatggactttgatct 1041
>gb|AY088587.1| Arabidopsis thaliana clone 8184 mRNA, complete sequence Length = 1349 Score = 54.0 bits (27), Expect = 6e-04 Identities = 153/195 (78%) Strand = Plus / Plus Query: 263 cctgatgatgacaacattcttcttactagaacatatgatgtcagcatcacatatgacaag 322 |||||||| || |||||||| | ||| | ||||||||| ||||||| || ||||| ||| Sbjct: 693 cctgatgacgataacattctccgaactcggacatatgatctcagcataacgtatgataag 752 Query: 323 tactatcaaactccacgtgtctggcttacaggctatgatgaggcaagaatgccattaaag 382 || || |||||||| ||||| ||||| || || ||||||||| |||| |||| | | Sbjct: 753 tattaccaaactcctcgtgtttggctgaccggttatgatgagtcaaggatgctgctgcaa 812 Query: 383 cctgaccttgtgtttcaagatatcagtcaagaccatgcacacaaaacggtgactatcgaa 442 ||||| ||||| | | ||| | || ||||||||||| | |||||||| || |||||| Sbjct: 813 cctgaacttgtaatggaggatgttagccaagaccatgctcgtaaaacggtcacaatcgaa 872 Query: 443 gaccacccacacttg 457 || || ||||||||| Sbjct: 873 gatcatccacacttg 887 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Plus Query: 552 gaagttgacaagtaccttttcatatttctaaaattcatggcttctgtcatacccaccatt 611 ||||| ||||||||||| ||| | || | || |||||||| || || || || || ||| Sbjct: 978 gaagtcgacaagtacctcttcctgttcttgaagttcatggcatcagttattccaacaatt 1037 Query: 612 gagtatgattacaccatggactttgatct 640 ||||| |||||||| |||||||||||||| Sbjct: 1038 gagtacgattacacaatggactttgatct 1066
>dbj|AB073170.1| Arabidopsis thaliana AtAPG3 mRNA for autophagy 3, complete cds Length = 1315 Score = 54.0 bits (27), Expect = 6e-04 Identities = 153/195 (78%) Strand = Plus / Plus Query: 263 cctgatgatgacaacattcttcttactagaacatatgatgtcagcatcacatatgacaag 322 |||||||| || |||||||| | ||| | ||||||||| ||||||| || ||||| ||| Sbjct: 639 cctgatgacgataacattctccgaactcggacatatgatctcagcataacgtatgataag 698 Query: 323 tactatcaaactccacgtgtctggcttacaggctatgatgaggcaagaatgccattaaag 382 || || |||||||| ||||| ||||| || || ||||||||| |||| |||| | | Sbjct: 699 tattaccaaactcctcgtgtttggctgaccggttatgatgagtcaaggatgctgctgcaa 758 Query: 383 cctgaccttgtgtttcaagatatcagtcaagaccatgcacacaaaacggtgactatcgaa 442 ||||| ||||| | | ||| | || ||||||||||| | |||||||| || |||||| Sbjct: 759 cctgaacttgtaatggaggatgttagccaagaccatgctcgtaaaacggtcacaatcgaa 818 Query: 443 gaccacccacacttg 457 || || ||||||||| Sbjct: 819 gatcatccacacttg 833 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Plus Query: 552 gaagttgacaagtaccttttcatatttctaaaattcatggcttctgtcatacccaccatt 611 ||||| ||||||||||| ||| | || | || |||||||| || || || || || ||| Sbjct: 924 gaagtcgacaagtacctcttcctgttcttgaagttcatggcatcagttattccaacaatt 983 Query: 612 gagtatgattacaccatggactttgatct 640 ||||| |||||||| |||||||||||||| Sbjct: 984 gagtacgattacacaatggactttgatct 1012
>ref|XM_793962.1| PREDICTED: Strongylocentrotus purpuratus similar to autophagy Apg3p/Aut1p-like (LOC594526), mRNA Length = 792 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 290 agaacatatgatgtcagcatcacatatgacaagtactatca 330 ||||| |||||| | | |||||||||||||||||||||||| Sbjct: 424 agaacgtatgatcttaacatcacatatgacaagtactatca 464
>gb|BT024713.1| Arabidopsis thaliana At5g61500 mRNA, complete cds Length = 942 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Plus Query: 552 gaagttgacaagtaccttttcatatttctaaaattcatggcttctgtcatacccaccatt 611 ||||| ||||||||||| ||| | || | || |||||||| || || || || || ||| Sbjct: 835 gaagtcgacaagtacctcttcctgttcttgaagttcatggcatcagttattccaacaatt 894 Query: 612 gagtatgattacaccatggactttgatct 640 ||||| |||||||| |||||||||||||| Sbjct: 895 gagtacgattacacaatggactttgatct 923 Score = 46.1 bits (23), Expect = 0.15 Identities = 152/195 (77%) Strand = Plus / Plus Query: 263 cctgatgatgacaacattcttcttactagaacatatgatgtcagcatcacatatgacaag 322 |||||||| || |||||||| | ||| | || |||||| ||||||| || ||||| ||| Sbjct: 550 cctgatgacgataacattctccgaactcggacgtatgatctcagcataacgtatgataag 609 Query: 323 tactatcaaactccacgtgtctggcttacaggctatgatgaggcaagaatgccattaaag 382 || || |||||||| ||||| ||||| || || ||||||||| |||| |||| | | Sbjct: 610 tattaccaaactcctcgtgtttggctgaccggttatgatgagtcaaggatgctgctgcaa 669 Query: 383 cctgaccttgtgtttcaagatatcagtcaagaccatgcacacaaaacggtgactatcgaa 442 ||||| ||||| | | ||| | || ||||||||||| | |||||||| || |||||| Sbjct: 670 cctgaacttgtaatggaggatgttagccaagaccatgctcgtaaaacggtcacaatcgaa 729 Query: 443 gaccacccacacttg 457 || || ||||||||| Sbjct: 730 gatcatccacacttg 744
>dbj|AK222077.1| Arabidopsis thaliana mRNA for autophagocytosis protein - like, complete cds, clone: RAFL22-82-C24 Length = 424 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Plus Query: 552 gaagttgacaagtaccttttcatatttctaaaattcatggcttctgtcatacccaccatt 611 ||||| ||||||||||| ||| | || | || |||||||| || || || || || ||| Sbjct: 43 gaagtcgacaagtacctcttcctgttcttgaagttcatggcatcagttattccaacaatt 102 Query: 612 gagtatgattacaccatggactttgatct 640 ||||| |||||||| |||||||||||||| Sbjct: 103 gagtacgattacacaatggactttgatct 131
>dbj|AB012239.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K11J9 Length = 69142 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Minus Query: 609 attgagtatgattacaccatggactttgatct 640 |||||||| |||||||| |||||||||||||| Sbjct: 8841 attgagtacgattacacaatggactttgatct 8810
>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete sequence Length = 1507550 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 176 gaggatatacctgacatggaca 197 |||||||||||||||||||||| Sbjct: 442491 gaggatatacctgacatggaca 442470
>gb|BC088024.1| Xenopus tropicalis autophagy-related 3-like (yeast), mRNA (cDNA clone MGC:107968 IMAGE:7025477), complete cds Length = 1152 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 308 atcacatatgacaagtactatcaaac 333 ||||||||||||||||| |||||||| Sbjct: 646 atcacatatgacaagtattatcaaac 671
>ref|XM_751223.1| Ustilago maydis 521 hypothetical protein (UM00169.1) partial mRNA Length = 1320 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Plus Query: 307 catcacatatgacaagtactatcaaactcc 336 |||||| || |||||||||||||||||||| Sbjct: 741 catcacgtacgacaagtactatcaaactcc 770
>ref|XM_782055.1| PREDICTED: Strongylocentrotus purpuratus similar to APG3 autophagy 3-like (LOC582084), mRNA Length = 468 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 290 agaacatatgatgtcagcatcacatatgacaagtacta 327 ||||| |||||| | | ||||||||||||||||||||| Sbjct: 100 agaacgtatgatcttaacatcacatatgacaagtacta 137
>ref|NM_001011420.1| Xenopus tropicalis autophagy-related 3-like (yeast) (atg3l), mRNA Length = 1152 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 308 atcacatatgacaagtactatcaaac 333 ||||||||||||||||| |||||||| Sbjct: 646 atcacatatgacaagtattatcaaac 671
>gb|AC007656.2| Homo sapiens 12q22 BAC RPCI11-534P6 (Rowswell Park Cancer Institute Human BAC Library) complete sequence Length = 171236 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 378 taaagcctgaccttgtgtttca 399 |||||||||||||||||||||| Sbjct: 11682 taaagcctgaccttgtgtttca 11703
>gb|AC013417.4|AC013417 Homo sapiens 12q22-103.4-106.5 BAC RP11-397H6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 114049 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 378 taaagcctgaccttgtgtttca 399 |||||||||||||||||||||| Sbjct: 66374 taaagcctgaccttgtgtttca 66395
>emb|CR761175.2| Xenopus tropicalis finished cDNA, clone TEgg015l06 Length = 1179 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 308 atcacatatgacaagtactatcaaac 333 ||||||||||||||||| |||||||| Sbjct: 659 atcacatatgacaagtattatcaaac 684
>gb|AC154808.2| Mus musculus BAC clone RP24-512K19 from chromosome 13, complete sequence Length = 187080 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 590 ggcttctgtcatacccaccat 610 ||||||||||||||||||||| Sbjct: 18487 ggcttctgtcatacccaccat 18467
>ref|XM_472631.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1503 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 tgatgatgacgacgacggcga 27 ||||||||||||||||||||| Sbjct: 24 tgatgatgacgacgacggcga 4
>ref|XM_382159.1| Gibberella zeae PH-1 chromosome 1 predicted protein (FG01983.1) partial mRNA Length = 1344 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 550 cagaagttgacaagtaccttt 570 ||||||||||||||||||||| Sbjct: 11 cagaagttgacaagtaccttt 31
>ref|XM_390260.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG10084.1) partial mRNA Length = 12666 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 7 tgatgatgacgacgacggcgaaggc 31 ||||||||||||||||| ||||||| Sbjct: 9153 tgatgatgacgacgacgacgaaggc 9177
>ref|XM_816168.1| Trypanosoma cruzi strain CL Brener vacuolar protein sorting protein 18 (Tc00.1047053506401.70) partial mRNA Length = 4809 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 gatgatgacgacgacggcgaa 28 ||||||||||||||||||||| Sbjct: 1170 gatgatgacgacgacggcgaa 1190
>ref|XM_800332.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053503727.29) partial mRNA Length = 2263 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 gatgatgacgacgacggcgaa 28 ||||||||||||||||||||| Sbjct: 1170 gatgatgacgacgacggcgaa 1190
>emb|BX548155.1|OSJN00293 Oryza sativa genomic DNA, chromosome 4, BAC clone: P0041A24, complete sequence Length = 50879 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 7 tgatgatgacgacgacggcga 27 ||||||||||||||||||||| Sbjct: 36272 tgatgatgacgacgacggcga 36292
>gb|AC073571.14| Homo sapiens 12 BAC RP11-136F16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 144231 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 569 tttcatatttctaaaattcat 589 ||||||||||||||||||||| Sbjct: 67264 tttcatatttctaaaattcat 67284
>gb|AC140776.6| Mus musculus chromosome 1, clone RP23-284K5, complete sequence Length = 223196 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 516 atcattgatgttatgatgtct 536 ||||||||||||||||||||| Sbjct: 54264 atcattgatgttatgatgtct 54284
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 7 tgatgatgacgacgacggcga 27 ||||||||||||||||||||| Sbjct: 22091580 tgatgatgacgacgacggcga 22091600
>gb|AC096570.1| Homo sapiens BAC clone RP11-368O18 from 2, complete sequence Length = 207972 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 569 tttcatatttctaaaattcat 589 ||||||||||||||||||||| Sbjct: 149828 tttcatatttctaaaattcat 149848
>gb|AC107419.3| Homo sapiens X BAC RP11-241K4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 151900 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 595 ctgtcatacccaccattgagt 615 ||||||||||||||||||||| Sbjct: 40516 ctgtcatacccaccattgagt 40536
>gb|AC154502.2| Mus musculus BAC clone RP24-87I20 from chromosome 13, complete sequence Length = 183319 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 590 ggcttctgtcatacccaccat 610 ||||||||||||||||||||| Sbjct: 38643 ggcttctgtcatacccaccat 38663
>emb|CT025550.11| Mouse DNA sequence from clone RP23-478C2 on chromosome 17, complete sequence Length = 187385 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 473 gccctcagtgcatccttgcaa 493 ||||||||||||||||||||| Sbjct: 107466 gccctcagtgcatccttgcaa 107486
>emb|BX897747.8| Zebrafish DNA sequence from clone DKEY-187J14 in linkage group 14, complete sequence Length = 217125 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 567 cttttcatatttctaaaattc 587 ||||||||||||||||||||| Sbjct: 10897 cttttcatatttctaaaattc 10877
>gb|L14303.1|HUMTRPTB Homo sapiens DNA sequence, tandem repeat region Length = 515 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 569 tttcatatttctaaaattcat 589 ||||||||||||||||||||| Sbjct: 116 tttcatatttctaaaattcat 136
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 cggccttgatgatgacgacgacgg 24 ||||||||||| |||||||||||| Sbjct: 808358 cggccttgatgttgacgacgacgg 808381
>gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold Length = 1952403 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 aaagatcattgatgttatga 531 |||||||||||||||||||| Sbjct: 1937366 aaagatcattgatgttatga 1937385
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 aagaggaggaagacattccg 88 |||||||||||||||||||| Sbjct: 1563445 aagaggaggaagacattccg 1563464
>ref|XM_870717.1| PREDICTED: Bos taurus similar to mitochondrial topoisomerase I (LOC618382), mRNA Length = 834 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 tggctcgcaacacatggggt 51 |||||||||||||||||||| Sbjct: 226 tggctcgcaacacatggggt 245
>gb|AC148027.3| Homo sapiens BAC clone RP11-184H2 from UL, complete sequence Length = 148764 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 415 ccatgcacacaaaacggtgactat 438 |||||||||||||| ||||||||| Sbjct: 147877 ccatgcacacaaaaaggtgactat 147900
>gb|AC182469.3| Pan troglodytes BAC clone CH251-496G17 from chromosome 4, complete sequence Length = 191618 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 415 ccatgcacacaaaacggtgactat 438 |||||||||||||| ||||||||| Sbjct: 87161 ccatgcacacaaaaaggtgactat 87138
>gb|AC159167.4| Callicebus moloch clone LB5-397N12, complete sequence Length = 70993 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 aaagatcattgatgttatga 531 |||||||||||||||||||| Sbjct: 63311 aaagatcattgatgttatga 63330
>gb|AC183989.2| Pan troglodytes BAC clone CH251-207E6 from chromosome 2, complete sequence Length = 163596 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 tgatgatgacaacattcttc 284 |||||||||||||||||||| Sbjct: 49417 tgatgatgacaacattcttc 49436
>gb|AC006387.3| Homo sapiens BAC clone CTA-360L10 from 7, complete sequence Length = 138764 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 567 cttttcatatttctaaaatt 586 |||||||||||||||||||| Sbjct: 137412 cttttcatatttctaaaatt 137431
>emb|CT025709.6| Mouse DNA sequence from clone RP23-364G1 on chromosome 17, complete sequence Length = 162359 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 ttttcatatttctaaaattc 587 |||||||||||||||||||| Sbjct: 144366 ttttcatatttctaaaattc 144347
>ref|XM_566940.1| Cryptococcus neoformans var. neoformans JEC21 glycosyl hydrolase (CNA05840) partial mRNA Length = 1354 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 aagaggaggaagacattccg 88 |||||||||||||||||||| Sbjct: 915 aagaggaggaagacattccg 896
>emb|BX324199.7| Zebrafish DNA sequence from clone DKEYP-7D4 in linkage group 17, complete sequence Length = 69782 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 ttttcatatttctaaaattc 587 |||||||||||||||||||| Sbjct: 52836 ttttcatatttctaaaattc 52817
>emb|BX530066.21| Zebrafish DNA sequence from clone DKEY-48C13 in linkage group 24, complete sequence Length = 202859 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 ttttcatatttctaaaattc 587 |||||||||||||||||||| Sbjct: 20748 ttttcatatttctaaaattc 20767
>gb|AC113999.3| Mus musculus BAC clone RP23-148D9 from 16, complete sequence Length = 209083 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 578 tctaaaattcatggcttctg 597 |||||||||||||||||||| Sbjct: 161076 tctaaaattcatggcttctg 161057
>emb|BX322575.19| Zebrafish DNA sequence from clone CH211-283E2 in linkage group 9, complete sequence Length = 149874 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 ttttcatatttctaaaattc 587 |||||||||||||||||||| Sbjct: 78479 ttttcatatttctaaaattc 78460
>gb|AC163721.4| Mus musculus BAC clone RP23-446B19 from chromosome 13, complete sequence Length = 184728 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 628 tggactttgatctaggcagt 647 |||||||||||||||||||| Sbjct: 15729 tggactttgatctaggcagt 15710
>emb|BX470253.2| Human DNA sequence from clone RP11-653A5 on chromosome 1 Contains the 3' end of the gene for cardiac ankyrin repeat kinase (CARK), the 5' end of a novel gene and the 3' end of a novel gene, complete sequence Length = 75492 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 aaagatcattgatgttatga 531 |||||||||||||||||||| Sbjct: 50353 aaagatcattgatgttatga 50372
>gb|AC175612.4| Saimiri boliviensis boliviensis clone CH254-62B4, complete sequence Length = 57378 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 aaagatcattgatgttatga 531 |||||||||||||||||||| Sbjct: 6429 aaagatcattgatgttatga 6448
>emb|AL031771.1|HS217O16 Human DNA sequence from clone RP1-217O16 on chromosome 6q24 Contains GSS, complete sequence Length = 87552 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 cgaaagaggaggaagacatt 85 |||||||||||||||||||| Sbjct: 72342 cgaaagaggaggaagacatt 72361
>gb|AC146674.3| Callithrix jacchus clone CH259-338M13, complete sequence Length = 228448 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 aaagatcattgatgttatga 531 |||||||||||||||||||| Sbjct: 213411 aaagatcattgatgttatga 213430
>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29 Length = 248550 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 gatgatgacgacgacggcgaaggc 31 ||||||| |||||||||||||||| Sbjct: 202094 gatgatgccgacgacggcgaaggc 202071
>emb|BX470263.9| Zebrafish DNA sequence from clone DKEY-15P9 in linkage group 9, complete sequence Length = 176022 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 ttttcatatttctaaaattc 587 |||||||||||||||||||| Sbjct: 7440 ttttcatatttctaaaattc 7421
>emb|BX908740.5| Zebrafish DNA sequence from clone DKEY-88E10 in linkage group 1, complete sequence Length = 90443 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 ttttcatatttctaaaattc 587 |||||||||||||||||||| Sbjct: 47570 ttttcatatttctaaaattc 47551
>emb|BX323590.8| Zebrafish DNA sequence from clone CH211-42I9 in linkage group 1, complete sequence Length = 178876 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 ttttcatatttctaaaattc 587 |||||||||||||||||||| Sbjct: 93051 ttttcatatttctaaaattc 93032
>gb|AC147932.3| Saimiri boliviensis boliviensis clone CH254-331B16, complete sequence Length = 185755 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 aaagatcattgatgttatga 531 |||||||||||||||||||| Sbjct: 181640 aaagatcattgatgttatga 181659
>emb|BX511256.9| Zebrafish DNA sequence from clone DKEY-58M10 in linkage group 1, complete sequence Length = 232496 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 ttttcatatttctaaaattc 587 |||||||||||||||||||| Sbjct: 185042 ttttcatatttctaaaattc 185023
>emb|BX324162.8| Zebrafish DNA sequence from clone DKEY-95O3 in linkage group 15, complete sequence Length = 155540 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 ttttcatatttctaaaattc 587 |||||||||||||||||||| Sbjct: 13323 ttttcatatttctaaaattc 13304
>gb|AC098482.2| Homo sapiens chromosome 3 clone RP11-839L21, complete sequence Length = 211533 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 563 gtaccttttcatatttctaa 582 |||||||||||||||||||| Sbjct: 38567 gtaccttttcatatttctaa 38586
>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 Length = 1841713 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 cgaaggctggctcgcaacacatgg 48 |||| ||||||||||||||||||| Sbjct: 177348 cgaatgctggctcgcaacacatgg 177325
>gb|AC016780.6| Genomic Sequence For Oryza sativa (japonica cultivar-group) cultivar Nipponbare Clone OSJNBa0061K21 From Chromosome 10, complete sequence Length = 112721 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gatgatgacgacgacggcga 27 |||||||||||||||||||| Sbjct: 53918 gatgatgacgacgacggcga 53937
>emb|BX072577.14| Zebrafish DNA sequence from clone CH211-151G22 in linkage group 21, complete sequence Length = 160341 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 ttttcatatttctaaaattc 587 |||||||||||||||||||| Sbjct: 99149 ttttcatatttctaaaattc 99168
>emb|BX897685.6| Zebrafish DNA sequence from clone CH211-234H8, complete sequence Length = 179286 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 ttttcatatttctaaaattc 587 |||||||||||||||||||| Sbjct: 18633 ttttcatatttctaaaattc 18652
>emb|BX470076.3| Zebrafish DNA sequence from clone DKEY-103E21 in linkage group 5, complete sequence Length = 112637 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 ttttcatatttctaaaattc 587 |||||||||||||||||||| Sbjct: 86314 ttttcatatttctaaaattc 86295
>emb|BX784031.5| Zebrafish DNA sequence from clone DKEY-174E15 in linkage group 21, complete sequence Length = 231014 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 ttttcatatttctaaaattc 587 |||||||||||||||||||| Sbjct: 209587 ttttcatatttctaaaattc 209568
>gb|AC064869.6| Homo sapiens BAC clone RP11-534J18 from 2, complete sequence Length = 169514 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 tgatgatgacaacattcttc 284 |||||||||||||||||||| Sbjct: 135267 tgatgatgacaacattcttc 135286
>gb|AC138776.2| Homo sapiens BAC clone RP11-1277N13 from UL, complete sequence Length = 202926 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 415 ccatgcacacaaaacggtgactat 438 |||||||||||||| ||||||||| Sbjct: 54340 ccatgcacacaaaaaggtgactat 54317
>emb|BX294160.6| Zebrafish DNA sequence from clone CH211-285I13 in linkage group 2, complete sequence Length = 151660 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 ttttcatatttctaaaattc 587 |||||||||||||||||||| Sbjct: 58745 ttttcatatttctaaaattc 58764
>emb|BX001036.12| Zebrafish DNA sequence from clone CH211-155G22 in linkage group 1, complete sequence Length = 178860 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 ttttcatatttctaaaattc 587 |||||||||||||||||||| Sbjct: 98164 ttttcatatttctaaaattc 98145
>gb|AC013464.6| Homo sapiens BAC clone RP11-337D5 from UL, complete sequence Length = 195161 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 tgatgatgacaacattcttc 284 |||||||||||||||||||| Sbjct: 180888 tgatgatgacaacattcttc 180869
>gb|AC148030.2| Homo sapiens chromosome UNKNOWN clone RP11-134K23, complete sequence Length = 157579 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 415 ccatgcacacaaaacggtgactat 438 |||||||||||||| ||||||||| Sbjct: 140788 ccatgcacacaaaaaggtgactat 140811
>emb|AL928946.17| Zebrafish DNA sequence from clone CH211-265D20 in linkage group 20, complete sequence Length = 157379 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 ttttcatatttctaaaattc 587 |||||||||||||||||||| Sbjct: 41256 ttttcatatttctaaaattc 41237
>emb|BX571672.10| Human DNA sequence from clone RP11-782C8 on chromosome 1, complete sequence Length = 175055 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 415 ccatgcacacaaaacggtgactat 438 |||||||||||||| ||||||||| Sbjct: 153522 ccatgcacacaaaaaggtgactat 153545
>emb|AL928851.6| Zebrafish DNA sequence from clone CH211-244E12 in linkage group 20, complete sequence Length = 96043 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 ttttcatatttctaaaattc 587 |||||||||||||||||||| Sbjct: 45946 ttttcatatttctaaaattc 45927
>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence Length = 144651 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gatgatgacgacgacggcga 27 |||||||||||||||||||| Sbjct: 130409 gatgatgacgacgacggcga 130428
>emb|CR769778.10| Zebrafish DNA sequence from clone CH211-147N12 in linkage group 18, complete sequence Length = 162450 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 ttttcatatttctaaaattc 587 |||||||||||||||||||| Sbjct: 12377 ttttcatatttctaaaattc 12358
>gb|AC154533.2| Mus musculus BAC clone RP23-469N16 from 16, complete sequence Length = 187213 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 578 tctaaaattcatggcttctg 597 |||||||||||||||||||| Sbjct: 167205 tctaaaattcatggcttctg 167224
>emb|AL845314.10| Zebrafish DNA sequence from clone CH211-153N11 in linkage group 20, complete sequence Length = 179498 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 ttttcatatttctaaaattc 587 |||||||||||||||||||| Sbjct: 155369 ttttcatatttctaaaattc 155350
>emb|BX323886.7| Zebrafish DNA sequence from clone CH211-127B11 in linkage group 4, complete sequence Length = 158224 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 ttttcatatttctaaaattc 587 |||||||||||||||||||| Sbjct: 10440 ttttcatatttctaaaattc 10421
>emb|BX000362.6| Zebrafish DNA sequence from clone DKEYP-93D12 in linkage group 20, complete sequence Length = 205186 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 ttttcatatttctaaaattc 587 |||||||||||||||||||| Sbjct: 88213 ttttcatatttctaaaattc 88194
>emb|BX001021.7| Zebrafish DNA sequence from clone BUSM1-140K9 in linkage group 20, complete sequence Length = 110590 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 ttttcatatttctaaaattc 587 |||||||||||||||||||| Sbjct: 73041 ttttcatatttctaaaattc 73022
>emb|AL137218.5| Human DNA sequence from clone RP11-111E21, complete sequence Length = 137718 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 415 ccatgcacacaaaacggtgactat 438 |||||||||||||| ||||||||| Sbjct: 109688 ccatgcacacaaaaaggtgactat 109711
>dbj|AK113965.1| Ciona intestinalis cDNA, clone:cicl019d22, full insert sequence Length = 1105 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 570 ttcatatttctaaaattcat 589 |||||||||||||||||||| Sbjct: 947 ttcatatttctaaaattcat 966
>emb|BX511022.7| Human DNA sequence from clone RP11-134H2 on chromosome 1, complete sequence Length = 80115 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 415 ccatgcacacaaaacggtgactat 438 |||||||||||||| ||||||||| Sbjct: 51073 ccatgcacacaaaaaggtgactat 51050
>gb|AF030695.1|AF030695 Filobasidiella neoformans putative Cel1p (CEL1) gene, complete cds Length = 2500 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 aagaggaggaagacattccg 88 |||||||||||||||||||| Sbjct: 1675 aagaggaggaagacattccg 1656
>emb|AL831740.9| Mouse DNA sequence from clone RP23-395P16 on chromosome 4, complete sequence Length = 166965 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gaagagcctgatgatgacaa 276 |||||||||||||||||||| Sbjct: 57883 gaagagcctgatgatgacaa 57864
>emb|Z48585.1|CEZK673 Caenorhabditis elegans Cosmid ZK673, complete sequence Length = 27540 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 567 cttttcatatttctaaaatt 586 |||||||||||||||||||| Sbjct: 8168 cttttcatatttctaaaatt 8187
>gb|AC167967.6| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940144D9, complete sequence Length = 114276 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 gatgatgacgacgacggcga 27 |||||||||||||||||||| Sbjct: 111087 gatgatgacgacgacggcga 111068
>dbj|AP006394.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT01K09, TM0278, complete sequence Length = 82082 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 tgatgatgacgacgacggcg 26 |||||||||||||||||||| Sbjct: 10207 tgatgatgacgacgacggcg 10188
>gb|DP000019.1| Callicebus moloch target 1 genomic scaffold Length = 2105003 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 aaagatcattgatgttatga 531 |||||||||||||||||||| Sbjct: 1924541 aaagatcattgatgttatga 1924560
>gb|AC163621.5| Mus musculus BAC clone RP23-122H1 from chromosome 13, complete sequence Length = 194866 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 628 tggactttgatctaggcagt 647 |||||||||||||||||||| Sbjct: 13793 tggactttgatctaggcagt 13812 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,984,513 Number of Sequences: 3902068 Number of extensions: 6984513 Number of successful extensions: 140976 Number of sequences better than 10.0: 104 Number of HSP's better than 10.0 without gapping: 106 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 140325 Number of HSP's gapped (non-prelim): 635 length of query: 665 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 642 effective length of database: 17,143,297,704 effective search space: 11005997125968 effective search space used: 11005997125968 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
