ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags32b11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197912.1| Oryza sativa (japonica cultivar-group) putative... 299 6e-78
2dbj|AK105726.1| Oryza sativa (japonica cultivar-group) cDNA clon... 299 6e-78
3dbj|AK099267.1| Oryza sativa (japonica cultivar-group) cDNA clon... 299 6e-78
4dbj|AK099219.1| Oryza sativa (japonica cultivar-group) cDNA clon... 299 6e-78
5dbj|AK070527.1| Oryza sativa (japonica cultivar-group) cDNA clon... 299 6e-78
6gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 gen... 270 5e-69
7dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 270 5e-69
8gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 270 5e-69
9emb|CR388365.9| Zebrafish DNA sequence from clone DKEY-24I24 in ... 42 2.3
10gb|AY098893.1| Citrus hybrid cultivar plastidic ATP/ADP transpor... 42 2.3
11gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 9.1
12gb|AC102296.6| Mus musculus chromosome 3, clone RP24-389G6, comp... 40 9.1
13gb|AC139637.17| Mus musculus chromosome 15, clone RP24-253M12, c... 40 9.1
14gb|AC109276.12| Mus musculus chromosome 1, clone RP23-461J11, co... 40 9.1
15ref|XM_458206.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 9.1
16gb|AY645843.1| Lactuca sp. Mavrodiev s.n. external transcribed s... 40 9.1
17gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118... 40 9.1
18gb|AY587008.1| Helianthus tuberosus chloroplast ATP/ADP transpor... 40 9.1
19gb|AC123038.3| Mus musculus BAC clone RP24-527G2 from chromosome... 40 9.1
20gb|AC142474.4| Mus musculus BAC clone RP24-362N7 from chromosome... 40 9.1
21gb|AC122254.4| Mus musculus BAC clone RP23-171M24 from 3, comple... 40 9.1
22gb|AC122894.2| Mus musculus BAC clone RP23-69F3 from 1, complete... 40 9.1
23emb|AL590362.12| Human DNA sequence from clone RP11-214G2 on chr... 40 9.1
24emb|AL590680.11| Human DNA sequence from clone RP11-246G15 on ch... 40 9.1
25emb|AL121771.17|HSJ548G19 Human DNA sequence from clone RP4-548G... 40 9.1
26emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS... 40 9.1
27dbj|AK023447.1| Homo sapiens cDNA FLJ13385 fis, clone PLACE1001088 40 9.1
28ref|NM_058032.3| Drosophila melanogaster Farnesyl pyrophosphate ... 40 9.1
29gb|U58760.2| Caenorhabditis elegans cosmid C27A2, complete sequence 40 9.1
30gb|AY071445.1| Drosophila melanogaster RE52884 full length cDNA 40 9.1
31gb|AC093826.2| Homo sapiens chromosome 4 clone RP11-392L5, compl... 40 9.1
32gb|AC134913.6| Mus musculus BAC clone RP23-195M6 from chromosome... 40 9.1
33ref|NM_001026822.1| Caenorhabditis elegans C27A2.7 (C27A2.7) mRN... 40 9.1
34emb|BX005327.9| Zebrafish DNA sequence from clone DKEY-65B16 in ... 40 9.1
35gb|AC093873.2| Homo sapiens BAC clone RP11-615B17 from 2, comple... 40 9.1
36gb|AF132554.1| Drosophila melanogaster GM06581 full insert cDNA 40 9.1
37gb|AC160645.2| Gallus gallus BAC clone CH261-21L11 from chromoso... 40 9.1
38emb|AL671853.7| Mouse DNA sequence from clone RP23-275N2 on chro... 40 9.1
39emb|AJ009963.1|DME9963 Drosophila melanogaster mRNA for farnesyl... 40 9.1 
>ref|NM_197912.1| Oryza sativa (japonica cultivar-group) putative peptide transporter
           (OSJNBa0056G17.8), mRNA
          Length = 1748

 Score =  299 bits (151), Expect = 6e-78
 Identities = 484/595 (81%)
 Strand = Plus / Plus

                                                                       
Query: 66  aatgttgatacatggaacggcaccacgttcctcatgcccgtcctcggagcatttcttgct 125
           |||||||||||||||||||| ||||| || || |  || || || ||||| ||  | |||
Sbjct: 255 aatgttgatacatggaacggaaccacttttcttacaccggtgcttggagccttcttggct 314

                                                                       
Query: 126 gatacatactgggggaagtacaagaccgtggctatctccataatattttatcttactggg 185
           |||||||||||||| |||||||||||| | || ||||| | | | || ||||||| ||||
Sbjct: 315 gatacatactggggaaagtacaagaccattgccatctctacagttttctatcttattggg 374

                                                                       
Query: 186 ttgctcatcattactgcttcggcgatcattccatctttacaacctgccccgtgtgaagga 245
           |||||  | ||||| || || ||  |||| |||||  |||||||||| || ||  | || 
Sbjct: 375 ttgcttgtaattaccgcctctgctgtcatcccatcactacaacctgctccatgcaatggg 434

                                                                       
Query: 246 aattcatgccctcctgccacagggtttcagtattttgtcttgtttgcttcactatacctt 305
           |  ||||| |||||||| ||||||||||||||||||||||| ||  |  | || ||||||
Sbjct: 435 agctcatgtcctcctgcaacagggtttcagtattttgtcttcttcaccgcgctctacctt 494

                                                                       
Query: 306 gtctcgattgggaccggaggggttaaatcagctttgctcccccttggggctgatcagtat 365
            | ||| |||| ||||| || || |||||||| || |||||| |||| ||||| ||||| 
Sbjct: 495 atttcggttggcaccgggggtgtcaaatcagcattactcccctttggagctgaccagtac 554

                                                                       
Query: 366 gatgattcaaaccttgaacagagtaaaaagaagcaagcgttctttagctggttcttcatt 425
            | ||||||||||| ||| ||||||||||||||||| | |||||||||| ||||||||||
Sbjct: 555 aacgattcaaacctcgaagagagtaaaaagaagcaatctttctttagcttgttcttcatt 614

                                                                       
Query: 426 gccattaaccttggtgtcttcatctcggggaccgttgttgtatggatacagcaaaatgtt 485
           || || |||||||| || ||||| ||||| || || || || ||||||||||||||||||
Sbjct: 615 gctatcaaccttggagtgttcatttcgggcactgtcgtcgtttggatacagcaaaatgtt 674

                                                                       
Query: 486 gcttggtctcttggattcggcatctcatcggtatgcatcattattgccacagttgccttc 545
           ||||||||||| |||||||||||||| ||  ||||| |  || |||||||||||||||| 
Sbjct: 675 gcttggtctctcggattcggcatctcctcaatatgccttgttgttgccacagttgccttt 734

                                                                       
Query: 546 ttggcaggaacaccaatctacagggttcaacttcctaccggaagcccactgaaaagtctt 605
           ||||||||||||||| | |||| ||| || ||||| |  ||||||||||| || ||| ||
Sbjct: 735 ttggcaggaacaccagtgtacaaggtccagcttcccagtggaagcccactcaagagtgtt 794

                                                                  
Query: 606 gtagcggtgtttgtcgcgtcatttaaaaagagaaaagtagaggttcctgctgata 660
           |||  ||| ||||| || || ||||| ||||||||| | ||||||||||| ||||
Sbjct: 795 gtaatggtttttgttgcctcttttaagaagagaaaactggaggttcctgccgata 849
to top
>dbj|AK105726.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-G10, full
           insert sequence
          Length = 1942

 Score =  299 bits (151), Expect = 6e-78
 Identities = 484/595 (81%)
 Strand = Plus / Plus

                                                                       
Query: 66  aatgttgatacatggaacggcaccacgttcctcatgcccgtcctcggagcatttcttgct 125
           |||||||||||||||||||| ||||| || || |  || || || ||||| ||  | |||
Sbjct: 312 aatgttgatacatggaacggaaccacttttcttacaccggtgcttggagccttcttggct 371

                                                                       
Query: 126 gatacatactgggggaagtacaagaccgtggctatctccataatattttatcttactggg 185
           |||||||||||||| |||||||||||| | || ||||| | | | || ||||||| ||||
Sbjct: 372 gatacatactggggaaagtacaagaccattgccatctctacagttttctatcttattggg 431

                                                                       
Query: 186 ttgctcatcattactgcttcggcgatcattccatctttacaacctgccccgtgtgaagga 245
           |||||  | ||||| || || ||  |||| |||||  |||||||||| || ||  | || 
Sbjct: 432 ttgcttgtaattaccgcctctgctgtcatcccatcactacaacctgctccatgcaatggg 491

                                                                       
Query: 246 aattcatgccctcctgccacagggtttcagtattttgtcttgtttgcttcactatacctt 305
           |  ||||| |||||||| ||||||||||||||||||||||| ||  |  | || ||||||
Sbjct: 492 agctcatgtcctcctgcaacagggtttcagtattttgtcttcttcaccgcgctctacctt 551

                                                                       
Query: 306 gtctcgattgggaccggaggggttaaatcagctttgctcccccttggggctgatcagtat 365
            | ||| |||| ||||| || || |||||||| || |||||| |||| ||||| ||||| 
Sbjct: 552 atttcggttggcaccgggggtgtcaaatcagcattactcccctttggagctgaccagtac 611

                                                                       
Query: 366 gatgattcaaaccttgaacagagtaaaaagaagcaagcgttctttagctggttcttcatt 425
            | ||||||||||| ||| ||||||||||||||||| | |||||||||| ||||||||||
Sbjct: 612 aacgattcaaacctcgaagagagtaaaaagaagcaatctttctttagcttgttcttcatt 671

                                                                       
Query: 426 gccattaaccttggtgtcttcatctcggggaccgttgttgtatggatacagcaaaatgtt 485
           || || |||||||| || ||||| ||||| || || || || ||||||||||||||||||
Sbjct: 672 gctatcaaccttggagtgttcatttcgggcactgtcgtcgtttggatacagcaaaatgtt 731

                                                                       
Query: 486 gcttggtctcttggattcggcatctcatcggtatgcatcattattgccacagttgccttc 545
           ||||||||||| |||||||||||||| ||  ||||| |  || |||||||||||||||| 
Sbjct: 732 gcttggtctctcggattcggcatctcctcaatatgccttgttgttgccacagttgccttt 791

                                                                       
Query: 546 ttggcaggaacaccaatctacagggttcaacttcctaccggaagcccactgaaaagtctt 605
           ||||||||||||||| | |||| ||| || ||||| |  ||||||||||| || ||| ||
Sbjct: 792 ttggcaggaacaccagtgtacaaggtccagcttcccagtggaagcccactcaagagtgtt 851

                                                                  
Query: 606 gtagcggtgtttgtcgcgtcatttaaaaagagaaaagtagaggttcctgctgata 660
           |||  ||| ||||| || || ||||| ||||||||| | ||||||||||| ||||
Sbjct: 852 gtaatggtttttgttgcctcttttaagaagagaaaactggaggttcctgccgata 906
to top
>dbj|AK099267.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018P15, full
           insert sequence
          Length = 1938

 Score =  299 bits (151), Expect = 6e-78
 Identities = 484/595 (81%)
 Strand = Plus / Plus

                                                                       
Query: 66  aatgttgatacatggaacggcaccacgttcctcatgcccgtcctcggagcatttcttgct 125
           |||||||||||||||||||| ||||| || || |  || || || ||||| ||  | |||
Sbjct: 302 aatgttgatacatggaacggaaccacttttcttacaccggtgcttggagccttcttggct 361

                                                                       
Query: 126 gatacatactgggggaagtacaagaccgtggctatctccataatattttatcttactggg 185
           |||||||||||||| |||||||||||| | || ||||| | | | || ||||||| ||||
Sbjct: 362 gatacatactggggaaagtacaagaccattgccatctctacagttttctatcttattggg 421

                                                                       
Query: 186 ttgctcatcattactgcttcggcgatcattccatctttacaacctgccccgtgtgaagga 245
           |||||  | ||||| || || ||  |||| |||||  |||||||||| || ||  | || 
Sbjct: 422 ttgcttgtaattaccgcctctgctgtcatcccatcactacaacctgctccatgcaatggg 481

                                                                       
Query: 246 aattcatgccctcctgccacagggtttcagtattttgtcttgtttgcttcactatacctt 305
           |  ||||| |||||||| ||||||||||||||||||||||| ||  |  | || ||||||
Sbjct: 482 agctcatgtcctcctgcaacagggtttcagtattttgtcttcttcaccgcgctctacctt 541

                                                                       
Query: 306 gtctcgattgggaccggaggggttaaatcagctttgctcccccttggggctgatcagtat 365
            | ||| |||| ||||| || || |||||||| || |||||| |||| ||||| ||||| 
Sbjct: 542 atttcggttggcaccgggggtgtcaaatcagcattactcccctttggagctgaccagtac 601

                                                                       
Query: 366 gatgattcaaaccttgaacagagtaaaaagaagcaagcgttctttagctggttcttcatt 425
            | ||||||||||| ||| ||||||||||||||||| | |||||||||| ||||||||||
Sbjct: 602 aacgattcaaacctcgaagagagtaaaaagaagcaatctttctttagcttgttcttcatt 661

                                                                       
Query: 426 gccattaaccttggtgtcttcatctcggggaccgttgttgtatggatacagcaaaatgtt 485
           || || |||||||| || ||||| ||||| || || || || ||||||||||||||||||
Sbjct: 662 gctatcaaccttggagtgttcatttcgggcactgtcgtcgtttggatacagcaaaatgtt 721

                                                                       
Query: 486 gcttggtctcttggattcggcatctcatcggtatgcatcattattgccacagttgccttc 545
           ||||||||||| |||||||||||||| ||  ||||| |  || |||||||||||||||| 
Sbjct: 722 gcttggtctctcggattcggcatctcctcaatatgccttgttgttgccacagttgccttt 781

                                                                       
Query: 546 ttggcaggaacaccaatctacagggttcaacttcctaccggaagcccactgaaaagtctt 605
           ||||||||||||||| | |||| ||| || ||||| |  ||||||||||| || ||| ||
Sbjct: 782 ttggcaggaacaccagtgtacaaggtccagcttcccagtggaagcccactcaagagtgtt 841

                                                                  
Query: 606 gtagcggtgtttgtcgcgtcatttaaaaagagaaaagtagaggttcctgctgata 660
           |||  ||| ||||| || || ||||| ||||||||| | ||||||||||| ||||
Sbjct: 842 gtaatggtttttgttgcctcttttaagaagagaaaactggaggttcctgccgata 896
to top
>dbj|AK099219.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013086I05, full
           insert sequence
          Length = 1880

 Score =  299 bits (151), Expect = 6e-78
 Identities = 484/595 (81%)
 Strand = Plus / Plus

                                                                       
Query: 66  aatgttgatacatggaacggcaccacgttcctcatgcccgtcctcggagcatttcttgct 125
           |||||||||||||||||||| ||||| || || |  || || || ||||| ||  | |||
Sbjct: 320 aatgttgatacatggaacggaaccacttttcttacaccggtgcttggagccttcttggct 379

                                                                       
Query: 126 gatacatactgggggaagtacaagaccgtggctatctccataatattttatcttactggg 185
           |||||||||||||| |||||||||||| | || ||||| | | | || ||||||| ||||
Sbjct: 380 gatacatactggggaaagtacaagaccattgccatctctacagttttctatcttattggg 439

                                                                       
Query: 186 ttgctcatcattactgcttcggcgatcattccatctttacaacctgccccgtgtgaagga 245
           |||||  | ||||| || || ||  |||| |||||  |||||||||| || ||  | || 
Sbjct: 440 ttgcttgtaattaccgcctctgctgtcatcccatcactacaacctgctccatgcaatggg 499

                                                                       
Query: 246 aattcatgccctcctgccacagggtttcagtattttgtcttgtttgcttcactatacctt 305
           |  ||||| |||||||| ||||||||||||||||||||||| ||  |  | || ||||||
Sbjct: 500 agctcatgtcctcctgcaacagggtttcagtattttgtcttcttcaccgcgctctacctt 559

                                                                       
Query: 306 gtctcgattgggaccggaggggttaaatcagctttgctcccccttggggctgatcagtat 365
            | ||| |||| ||||| || || |||||||| || |||||| |||| ||||| ||||| 
Sbjct: 560 atttcggttggcaccgggggtgtcaaatcagcattactcccctttggagctgaccagtac 619

                                                                       
Query: 366 gatgattcaaaccttgaacagagtaaaaagaagcaagcgttctttagctggttcttcatt 425
            | ||||||||||| ||| ||||||||||||||||| | |||||||||| ||||||||||
Sbjct: 620 aacgattcaaacctcgaagagagtaaaaagaagcaatctttctttagcttgttcttcatt 679

                                                                       
Query: 426 gccattaaccttggtgtcttcatctcggggaccgttgttgtatggatacagcaaaatgtt 485
           || || |||||||| || ||||| ||||| || || || || ||||||||||||||||||
Sbjct: 680 gctatcaaccttggagtgttcatttcgggcactgtcgtcgtttggatacagcaaaatgtt 739

                                                                       
Query: 486 gcttggtctcttggattcggcatctcatcggtatgcatcattattgccacagttgccttc 545
           ||||||||||| |||||||||||||| ||  ||||| |  || |||||||||||||||| 
Sbjct: 740 gcttggtctctcggattcggcatctcctcaatatgccttgttgttgccacagttgccttt 799

                                                                       
Query: 546 ttggcaggaacaccaatctacagggttcaacttcctaccggaagcccactgaaaagtctt 605
           ||||||||||||||| | |||| ||| || ||||| |  ||||||||||| || ||| ||
Sbjct: 800 ttggcaggaacaccagtgtacaaggtccagcttcccagtggaagcccactcaagagtgtt 859

                                                                  
Query: 606 gtagcggtgtttgtcgcgtcatttaaaaagagaaaagtagaggttcctgctgata 660
           |||  ||| ||||| || || ||||| ||||||||| | ||||||||||| ||||
Sbjct: 860 gtaatggtttttgttgcctcttttaagaagagaaaactggaggttcctgccgata 914
to top
>dbj|AK070527.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060H09, full
           insert sequence
          Length = 1950

 Score =  299 bits (151), Expect = 6e-78
 Identities = 484/595 (81%)
 Strand = Plus / Plus

                                                                       
Query: 66  aatgttgatacatggaacggcaccacgttcctcatgcccgtcctcggagcatttcttgct 125
           |||||||||||||||||||| ||||| || || |  || || || ||||| ||  | |||
Sbjct: 320 aatgttgatacatggaacggaaccacttttcttacaccggtgcttggagccttcttggct 379

                                                                       
Query: 126 gatacatactgggggaagtacaagaccgtggctatctccataatattttatcttactggg 185
           |||||||||||||| |||||||||||| | || ||||| | | | || ||||||| ||||
Sbjct: 380 gatacatactggggaaagtacaagaccattgccatctctacagttttctatcttattggg 439

                                                                       
Query: 186 ttgctcatcattactgcttcggcgatcattccatctttacaacctgccccgtgtgaagga 245
           |||||  | ||||| || || ||  |||| |||||  |||||||||| || ||  | || 
Sbjct: 440 ttgcttgtaattaccgcctctgctgtcatcccatcactacaacctgctccatgcaatggg 499

                                                                       
Query: 246 aattcatgccctcctgccacagggtttcagtattttgtcttgtttgcttcactatacctt 305
           |  ||||| |||||||| ||||||||||||||||||||||| ||  |  | || ||||||
Sbjct: 500 agctcatgtcctcctgcaacagggtttcagtattttgtcttcttcaccgcgctctacctt 559

                                                                       
Query: 306 gtctcgattgggaccggaggggttaaatcagctttgctcccccttggggctgatcagtat 365
            | ||| |||| ||||| || || |||||||| || |||||| |||| ||||| ||||| 
Sbjct: 560 atttcggttggcaccgggggtgtcaaatcagcattactcccctttggagctgaccagtac 619

                                                                       
Query: 366 gatgattcaaaccttgaacagagtaaaaagaagcaagcgttctttagctggttcttcatt 425
            | ||||||||||| ||| ||||||||||||||||| | |||||||||| ||||||||||
Sbjct: 620 aacgattcaaacctcgaagagagtaaaaagaagcaatctttctttagcttgttcttcatt 679

                                                                       
Query: 426 gccattaaccttggtgtcttcatctcggggaccgttgttgtatggatacagcaaaatgtt 485
           || || |||||||| || ||||| ||||| || || || || ||||||||||||||||||
Sbjct: 680 gctatcaaccttggagtgttcatttcgggcactgtcgtcgtttggatacagcaaaatgtt 739

                                                                       
Query: 486 gcttggtctcttggattcggcatctcatcggtatgcatcattattgccacagttgccttc 545
           ||||||||||| |||||||||||||| ||  ||||| |  || |||||||||||||||| 
Sbjct: 740 gcttggtctctcggattcggcatctcctcaatatgccttgttgttgccacagttgccttt 799

                                                                       
Query: 546 ttggcaggaacaccaatctacagggttcaacttcctaccggaagcccactgaaaagtctt 605
           ||||||||||||||| | |||| ||| || ||||| |  ||||||||||| || ||| ||
Sbjct: 800 ttggcaggaacaccagtgtacaaggtccagcttcccagtggaagcccactcaagagtgtt 859

                                                                  
Query: 606 gtagcggtgtttgtcgcgtcatttaaaaagagaaaagtagaggttcctgctgata 660
           |||  ||| ||||| || || ||||| ||||||||| | ||||||||||| ||||
Sbjct: 860 gtaatggtttttgttgcctcttttaagaagagaaaactggaggttcctgccgata 914
to top
>gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 genomic sequence, complete
             sequence
          Length = 139999

 Score =  270 bits (136), Expect = 5e-69
 Identities = 343/412 (83%)
 Strand = Plus / Plus

                                                                         
Query: 249   tcatgccctcctgccacagggtttcagtattttgtcttgtttgcttcactataccttgtc 308
             ||||| |||||||| ||||||||||||||||||||||| ||  |  | || |||||| | 
Sbjct: 50160 tcatgtcctcctgcaacagggtttcagtattttgtcttcttcaccgcgctctaccttatt 50219

                                                                         
Query: 309   tcgattgggaccggaggggttaaatcagctttgctcccccttggggctgatcagtatgat 368
             ||| |||| ||||| || || |||||||| || |||||| |||| ||||| |||||  | 
Sbjct: 50220 tcggttggcaccgggggtgtcaaatcagcattactcccctttggagctgaccagtacaac 50279

                                                                         
Query: 369   gattcaaaccttgaacagagtaaaaagaagcaagcgttctttagctggttcttcattgcc 428
             ||||||||||| ||| ||||||||||||||||| | |||||||||| |||||||||||| 
Sbjct: 50280 gattcaaacctcgaagagagtaaaaagaagcaatctttctttagcttgttcttcattgct 50339

                                                                         
Query: 429   attaaccttggtgtcttcatctcggggaccgttgttgtatggatacagcaaaatgttgct 488
             || |||||||| || ||||| ||||| || || || || |||||||||||||||||||||
Sbjct: 50340 atcaaccttggagtgttcatttcgggcactgtcgtcgtttggatacagcaaaatgttgct 50399

                                                                         
Query: 489   tggtctcttggattcggcatctcatcggtatgcatcattattgccacagttgccttcttg 548
             |||||||| |||||||||||||| ||  ||||| |  || |||||||||||||||| |||
Sbjct: 50400 tggtctctcggattcggcatctcctcaatatgccttgttgttgccacagttgcctttttg 50459

                                                                         
Query: 549   gcaggaacaccaatctacagggttcaacttcctaccggaagcccactgaaaagtcttgta 608
             |||||||||||| | |||| ||| || ||||| |  ||||||||||| || ||| |||||
Sbjct: 50460 gcaggaacaccagtgtacaaggtccagcttcccagtggaagcccactcaagagtgttgta 50519

                                                                 
Query: 609   gcggtgtttgtcgcgtcatttaaaaagagaaaagtagaggttcctgctgata 660
               ||| ||||| || || ||||| ||||||||| | ||||||||||| ||||
Sbjct: 50520 atggtttttgttgcctcttttaagaagagaaaactggaggttcctgccgata 50571



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Plus

                                                                         
Query: 66    aatgttgatacatggaacggcaccacgttcctcatgcccgtcctcggagcatttcttgct 125
             |||||||||||||||||||| ||||| || || |  || || || ||||| ||  | |||
Sbjct: 49823 aatgttgatacatggaacggaaccacttttcttacaccggtgcttggagccttcttggct 49882

                                        
Query: 126   gatacatactgggggaagtacaagacc 152
             |||||||||||||| ||||||||||||
Sbjct: 49883 gatacatactggggaaagtacaagacc 49909
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  270 bits (136), Expect = 5e-69
 Identities = 343/412 (83%)
 Strand = Plus / Plus

                                                                            
Query: 249      tcatgccctcctgccacagggtttcagtattttgtcttgtttgcttcactataccttgtc 308
                ||||| |||||||| ||||||||||||||||||||||| ||  |  | || |||||| | 
Sbjct: 22595491 tcatgtcctcctgcaacagggtttcagtattttgtcttcttcaccgcgctctaccttatt 22595550

                                                                            
Query: 309      tcgattgggaccggaggggttaaatcagctttgctcccccttggggctgatcagtatgat 368
                ||| |||| ||||| || || |||||||| || |||||| |||| ||||| |||||  | 
Sbjct: 22595551 tcggttggcaccgggggtgtcaaatcagcattactcccctttggagctgaccagtacaac 22595610

                                                                            
Query: 369      gattcaaaccttgaacagagtaaaaagaagcaagcgttctttagctggttcttcattgcc 428
                ||||||||||| ||| ||||||||||||||||| | |||||||||| |||||||||||| 
Sbjct: 22595611 gattcaaacctcgaagagagtaaaaagaagcaatctttctttagcttgttcttcattgct 22595670

                                                                            
Query: 429      attaaccttggtgtcttcatctcggggaccgttgttgtatggatacagcaaaatgttgct 488
                || |||||||| || ||||| ||||| || || || || |||||||||||||||||||||
Sbjct: 22595671 atcaaccttggagtgttcatttcgggcactgtcgtcgtttggatacagcaaaatgttgct 22595730

                                                                            
Query: 489      tggtctcttggattcggcatctcatcggtatgcatcattattgccacagttgccttcttg 548
                |||||||| |||||||||||||| ||  ||||| |  || |||||||||||||||| |||
Sbjct: 22595731 tggtctctcggattcggcatctcctcaatatgccttgttgttgccacagttgcctttttg 22595790

                                                                            
Query: 549      gcaggaacaccaatctacagggttcaacttcctaccggaagcccactgaaaagtcttgta 608
                |||||||||||| | |||| ||| || ||||| |  ||||||||||| || ||| |||||
Sbjct: 22595791 gcaggaacaccagtgtacaaggtccagcttcccagtggaagcccactcaagagtgttgta 22595850

                                                                    
Query: 609      gcggtgtttgtcgcgtcatttaaaaagagaaaagtagaggttcctgctgata 660
                  ||| ||||| || || ||||| ||||||||| | ||||||||||| ||||
Sbjct: 22595851 atggtttttgttgcctcttttaagaagagaaaactggaggttcctgccgata 22595902



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Plus

                                                                            
Query: 66       aatgttgatacatggaacggcaccacgttcctcatgcccgtcctcggagcatttcttgct 125
                |||||||||||||||||||| ||||| || || |  || || || ||||| ||  | |||
Sbjct: 22595154 aatgttgatacatggaacggaaccacttttcttacaccggtgcttggagccttcttggct 22595213

                                           
Query: 126      gatacatactgggggaagtacaagacc 152
                |||||||||||||| ||||||||||||
Sbjct: 22595214 gatacatactggggaaagtacaagacc 22595240
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  270 bits (136), Expect = 5e-69
 Identities = 343/412 (83%)
 Strand = Plus / Plus

                                                                            
Query: 249      tcatgccctcctgccacagggtttcagtattttgtcttgtttgcttcactataccttgtc 308
                ||||| |||||||| ||||||||||||||||||||||| ||  |  | || |||||| | 
Sbjct: 22607959 tcatgtcctcctgcaacagggtttcagtattttgtcttcttcaccgcgctctaccttatt 22608018

                                                                            
Query: 309      tcgattgggaccggaggggttaaatcagctttgctcccccttggggctgatcagtatgat 368
                ||| |||| ||||| || || |||||||| || |||||| |||| ||||| |||||  | 
Sbjct: 22608019 tcggttggcaccgggggtgtcaaatcagcattactcccctttggagctgaccagtacaac 22608078

                                                                            
Query: 369      gattcaaaccttgaacagagtaaaaagaagcaagcgttctttagctggttcttcattgcc 428
                ||||||||||| ||| ||||||||||||||||| | |||||||||| |||||||||||| 
Sbjct: 22608079 gattcaaacctcgaagagagtaaaaagaagcaatctttctttagcttgttcttcattgct 22608138

                                                                            
Query: 429      attaaccttggtgtcttcatctcggggaccgttgttgtatggatacagcaaaatgttgct 488
                || |||||||| || ||||| ||||| || || || || |||||||||||||||||||||
Sbjct: 22608139 atcaaccttggagtgttcatttcgggcactgtcgtcgtttggatacagcaaaatgttgct 22608198

                                                                            
Query: 489      tggtctcttggattcggcatctcatcggtatgcatcattattgccacagttgccttcttg 548
                |||||||| |||||||||||||| ||  ||||| |  || |||||||||||||||| |||
Sbjct: 22608199 tggtctctcggattcggcatctcctcaatatgccttgttgttgccacagttgcctttttg 22608258

                                                                            
Query: 549      gcaggaacaccaatctacagggttcaacttcctaccggaagcccactgaaaagtcttgta 608
                |||||||||||| | |||| ||| || ||||| |  ||||||||||| || ||| |||||
Sbjct: 22608259 gcaggaacaccagtgtacaaggtccagcttcccagtggaagcccactcaagagtgttgta 22608318

                                                                    
Query: 609      gcggtgtttgtcgcgtcatttaaaaagagaaaagtagaggttcctgctgata 660
                  ||| ||||| || || ||||| ||||||||| | ||||||||||| ||||
Sbjct: 22608319 atggtttttgttgcctcttttaagaagagaaaactggaggttcctgccgata 22608370



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Plus

                                                                            
Query: 66       aatgttgatacatggaacggcaccacgttcctcatgcccgtcctcggagcatttcttgct 125
                |||||||||||||||||||| ||||| || || |  || || || ||||| ||  | |||
Sbjct: 22607622 aatgttgatacatggaacggaaccacttttcttacaccggtgcttggagccttcttggct 22607681

                                           
Query: 126      gatacatactgggggaagtacaagacc 152
                |||||||||||||| ||||||||||||
Sbjct: 22607682 gatacatactggggaaagtacaagacc 22607708
to top
>emb|CR388365.9| Zebrafish DNA sequence from clone DKEY-24I24 in linkage group 16,
              complete sequence
          Length = 150795

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 270    tttcagtattttgtcttgttt 290
              |||||||||||||||||||||
Sbjct: 133891 tttcagtattttgtcttgttt 133911
to top
>gb|AY098893.1| Citrus hybrid cultivar plastidic ATP/ADP transporter mRNA, partial
            cds; nuclear gene for plastid product
          Length = 2122

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 430  ttaaccttggtgtcttcatct 450
            |||||||||||||||||||||
Sbjct: 1456 ttaaccttggtgtcttcatct 1436
to top
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 250     catgccctcctgccacaggg 269
               ||||||||||||||||||||
Sbjct: 2973010 catgccctcctgccacaggg 2973029
to top
>gb|AC102296.6| Mus musculus chromosome 3, clone RP24-389G6, complete sequence
          Length = 184243

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 275   gtattttgtcttgtttgctt 294
             ||||||||||||||||||||
Sbjct: 16709 gtattttgtcttgtttgctt 16728
to top
>gb|AC139637.17| Mus musculus chromosome 15, clone RP24-253M12, complete sequence
          Length = 136076

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 177    cttactgggttgctcatcat 196
              ||||||||||||||||||||
Sbjct: 114952 cttactgggttgctcatcat 114933
to top
>gb|AC109276.12| Mus musculus chromosome 1, clone RP23-461J11, complete sequence
          Length = 173589

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 627    tttaaaaagagaaaagtaga 646
              ||||||||||||||||||||
Sbjct: 173350 tttaaaaagagaaaagtaga 173369
to top
>ref|XM_458206.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0C13167g)
           partial mRNA
          Length = 1737

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 121 ttgctgatacatactgggggaagt 144
           ||||||||||||||||||| ||||
Sbjct: 383 ttgctgatacatactggggtaagt 406
to top
>gb|AY645843.1| Lactuca sp. Mavrodiev s.n. external transcribed spacer, partial
           sequence
          Length = 523

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 482 tgttgcttggtctcttggat 501
           ||||||||||||||||||||
Sbjct: 361 tgttgcttggtctcttggat 380
to top
>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome
          Length = 1827111

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 409     ttagctggttcttcattgcc 428
               ||||||||||||||||||||
Sbjct: 1109403 ttagctggttcttcattgcc 1109422
to top
>gb|AY587008.1| Helianthus tuberosus chloroplast ATP/ADP transporter protein (AAT)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1464

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 430  ttaaccttggtgtcttcatc 449
            ||||||||||||||||||||
Sbjct: 1139 ttaaccttggtgtcttcatc 1120
to top
>gb|AC123038.3| Mus musculus BAC clone RP24-527G2 from chromosome 3, complete sequence
          Length = 144150

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 177   cttactgggttgctcatcat 196
             ||||||||||||||||||||
Sbjct: 73325 cttactgggttgctcatcat 73344
to top
>gb|AC142474.4| Mus musculus BAC clone RP24-362N7 from chromosome 15, complete sequence
          Length = 172879

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 177    cttactgggttgctcatcat 196
              ||||||||||||||||||||
Sbjct: 135175 cttactgggttgctcatcat 135194
to top
>gb|AC122254.4| Mus musculus BAC clone RP23-171M24 from 3, complete sequence
          Length = 198281

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 275    gtattttgtcttgtttgctt 294
              ||||||||||||||||||||
Sbjct: 116521 gtattttgtcttgtttgctt 116540
to top
>gb|AC122894.2| Mus musculus BAC clone RP23-69F3 from 1, complete sequence
          Length = 205318

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 627    tttaaaaagagaaaagtaga 646
              ||||||||||||||||||||
Sbjct: 120271 tttaaaaagagaaaagtaga 120252
to top
>emb|AL590362.12| Human DNA sequence from clone RP11-214G2 on chromosome 9 Contains a CpG
              island, complete sequence
          Length = 154698

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 624    tcatttaaaaagagaaaagt 643
              ||||||||||||||||||||
Sbjct: 133371 tcatttaaaaagagaaaagt 133352
to top
>emb|AL590680.11| Human DNA sequence from clone RP11-246G15 on chromosome 6, complete
            sequence
          Length = 21388

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 387  agtaaaaagaagcaagcgttcttt 410
            ||||||||||||||||| ||||||
Sbjct: 8289 agtaaaaagaagcaagccttcttt 8312
to top
>emb|AL121771.17|HSJ548G19 Human DNA sequence from clone RP4-548G19 on chromosome 20 Contains the
             5' end of the ZFP64 gene for zinc finger protein 64
             homolog (mouse) and a CpG island, complete sequence
          Length = 61579

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 623   gtcatttaaaaagagaaaag 642
             ||||||||||||||||||||
Sbjct: 32600 gtcatttaaaaagagaaaag 32581
to top
>emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces
               hansenii
          Length = 1592360

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 121     ttgctgatacatactgggggaagt 144
               ||||||||||||||||||| ||||
Sbjct: 1078302 ttgctgatacatactggggtaagt 1078325
to top
>dbj|AK023447.1| Homo sapiens cDNA FLJ13385 fis, clone PLACE1001088
          Length = 1892

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 624  tcatttaaaaagagaaaagt 643
            ||||||||||||||||||||
Sbjct: 1849 tcatttaaaaagagaaaagt 1868
to top
>ref|NM_058032.3| Drosophila melanogaster Farnesyl pyrophosphate synthase CG12389-RA
            (Fpps), mRNA
          Length = 1511

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 407  ctttagctggttcttcattgccat 430
            |||||||||||||||| |||||||
Sbjct: 1213 ctttagctggttcttctttgccat 1190
to top
>gb|U58760.2| Caenorhabditis elegans cosmid C27A2, complete sequence
          Length = 29370

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 371   ttcaaaccttgaacagagta 390
             ||||||||||||||||||||
Sbjct: 18580 ttcaaaccttgaacagagta 18561
to top
>gb|AY071445.1| Drosophila melanogaster RE52884 full length cDNA
          Length = 1477

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 407  ctttagctggttcttcattgccat 430
            |||||||||||||||| |||||||
Sbjct: 1171 ctttagctggttcttctttgccat 1148
to top
>gb|AC093826.2| Homo sapiens chromosome 4 clone RP11-392L5, complete sequence
          Length = 174277

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 406   tctttagctggttcttcatt 425
             ||||||||||||||||||||
Sbjct: 15275 tctttagctggttcttcatt 15294
to top
>gb|AC134913.6| Mus musculus BAC clone RP23-195M6 from chromosome 13, complete sequence
          Length = 223130

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 384   cagagtaaaaagaagcaagc 403
             ||||||||||||||||||||
Sbjct: 83924 cagagtaaaaagaagcaagc 83943
to top
>ref|NM_001026822.1| Caenorhabditis elegans C27A2.7 (C27A2.7) mRNA, complete cds
          Length = 579

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 371 ttcaaaccttgaacagagta 390
           ||||||||||||||||||||
Sbjct: 54  ttcaaaccttgaacagagta 73
to top
>emb|BX005327.9| Zebrafish DNA sequence from clone DKEY-65B16 in linkage group 7, complete
              sequence
          Length = 237129

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 271    ttcagtattttgtcttgttt 290
              ||||||||||||||||||||
Sbjct: 147251 ttcagtattttgtcttgttt 147232



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 271    ttcagtattttgtcttgttt 290
              ||||||||||||||||||||
Sbjct: 146758 ttcagtattttgtcttgttt 146739
to top
>gb|AC093873.2| Homo sapiens BAC clone RP11-615B17 from 2, complete sequence
          Length = 210320

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 278    ttttgtcttgtttgcttcac 297
              ||||||||||||||||||||
Sbjct: 104531 ttttgtcttgtttgcttcac 104550
to top
>gb|AF132554.1| Drosophila melanogaster GM06581 full insert cDNA
          Length = 1482

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 407  ctttagctggttcttcattgccat 430
            |||||||||||||||| |||||||
Sbjct: 1175 ctttagctggttcttctttgccat 1152
to top
>gb|AC160645.2| Gallus gallus BAC clone CH261-21L11 from chromosome unknown, complete
              sequence
          Length = 223748

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 112    gagcatttcttgctgataca 131
              ||||||||||||||||||||
Sbjct: 220554 gagcatttcttgctgataca 220535
to top
>emb|AL671853.7| Mouse DNA sequence from clone RP23-275N2 on chromosome X, complete
              sequence
          Length = 200224

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 177    cttactgggttgctcatcat 196
              ||||||||||||||||||||
Sbjct: 154203 cttactgggttgctcatcat 154184
to top
>emb|AJ009963.1|DME9963 Drosophila melanogaster mRNA for farnesyl pyrophosphate synthase,
           partial
          Length = 1264

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 407 ctttagctggttcttcattgccat 430
           |||||||||||||||| |||||||
Sbjct: 977 ctttagctggttcttctttgccat 954


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,090,950
Number of Sequences: 3902068
Number of extensions: 6090950
Number of successful extensions: 118062
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 117897
Number of HSP's gapped (non-prelim): 157
length of query: 666
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 643
effective length of database: 17,143,297,704
effective search space: 11023140423672
effective search space used: 11023140423672
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top