>UBAX1_ARATH (Q7Y175) UBA and UBX domain-containing protein At4g15410|
          Length = 421

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 36/99 (36%), Positives = 45/99 (45%), Gaps = 20/99 (20%)
 Frame = +3

Query: 42  PNPTANTSAMSSSN---------GNAGKKPAA---SGGR--------GGIRTLADINRXX 161
           P+P+ + SA  SS          G AG+       SG R        G IRT AD+NR  
Sbjct: 86  PSPSRSRSASPSSRAAPYGLRSRGGAGENKETENPSGIRSSRSRQHAGNIRTFADLNRSP 145

Query: 162 XXXXXXXXXXXXXXEPQEYYTGGEKSGMLVQDPTRRNNV 278
                         E  EYYTGG+KSGM+VQDP +  +V
Sbjct: 146 ADGEGSDSD-----EANEYYTGGQKSGMMVQDPKKVKDV 179

>CAD24_HUMAN (Q86UP0) Cadherin-24 precursor|
          Length = 819

 Score = 32.3 bits (72), Expect = 0.48
 Identities = 26/72 (36%), Positives = 31/72 (43%), Gaps = 11/72 (15%)
 Frame = -3

Query: 184 PPAPGNPEGARLMS-ARVRMPPRPPDAAGFFPALPLEELIAD----------VFAVGFGS 38
           PPAPG P    ++  ARV   PRPP  A     L L    AD          V   G+  
Sbjct: 711 PPAPGPPARRDVLPRARVSRQPRPPGPADVAQLLALRLREADEDPGVPPYDSVQVYGYEG 770

Query: 37  RVASCTLLASRG 2
           R +SC  L+S G
Sbjct: 771 RGSSCGSLSSLG 782

>XPC_HUMAN (Q01831) DNA-repair protein complementing XP-C cells (Xeroderma|
           pigmentosum group C complementing protein) (p125)
          Length = 939

 Score = 32.0 bits (71), Expect = 0.62
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +3

Query: 12  ASRVHDATREPNPTANTSAMSSSNGNAGKKPAASGGRGGIRTLADINR 155
           ASR H  +   +P+   ++ SSS+   GKK  + G +   R++A I++
Sbjct: 482 ASRTHRGSHRKDPSLPVASSSSSSSKRGKKMCSDGEKAEKRSIAGIDQ 529

>ZYX_CHICK (Q04584) Zyxin|
          Length = 542

 Score = 31.6 bits (70), Expect = 0.81
 Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = -3

Query: 205 SSESLPLPPAPGNPEGARL-MSARVRMPPRPPDAAGFFPALPLE 77
           ++E LPLPP P  P G  L  S+    PP PP     FP  P E
Sbjct: 78  TAEELPLPPPP--PPGEELSFSSNCAFPPPPPPFEEPFPPAPDE 119

>IRS2_HUMAN (Q9Y4H2) Insulin receptor substrate 2 (IRS-2)|
          Length = 1338

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 20/59 (33%), Positives = 25/59 (42%)
 Frame = -3

Query: 196  SLPLPPAPGNPEGARLMSARVRMPPRPPDAAGFFPALPLEELIADVFAVGFGSRVASCT 20
            S P PP P  P  +   S +   PP PP A G    LP    +A     G  S ++S T
Sbjct: 1011 SSPYPPLPPRPSASPSSSLQ---PPPPPPAPGELYRLPPASAVATAQGPGAASSLSSDT 1066

>PRPP_HUMAN (P81489) Salivary proline-rich protein II-1 (Fragment)|
          Length = 174

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = -3

Query: 208 GSSESLPLPPAPGNPEGARLMSARVRMPPRPPDAAG 101
           G ++S   PP PG PEG          P RPP   G
Sbjct: 90  GGNQSQGTPPPPGKPEGRPPQQGGPGKPERPPPQGG 125

>CTGE5_MOUSE (Q8R311) Cutaneous T-cell lymphoma-associated antigen 5 homolog|
           (cTAGE-5 protein) (Meningioma-expressed antigen 6)
          Length = 779

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 18/39 (46%), Positives = 19/39 (48%)
 Frame = -3

Query: 190 PLPPAPGNPEGARLMSARVRMPPRPPDAAGFFPALPLEE 74
           PLPP PG     R + A    PP  P  AGFFP  P  E
Sbjct: 720 PLPPFPG-----RTVYAPRGFPPYLPPRAGFFPPPPHPE 753

>IRF5_HUMAN (Q13568) Interferon regulatory factor 5 (IRF-5)|
          Length = 498

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -3

Query: 241 PLFSPPV*YSWGSSESLPLPPAPGNPEGARLMSARVRMP 125
           P   PPV     + +  PL P PGNP G R + + V  P
Sbjct: 182 PTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEP 220

>DNAA_STRRE (Q9ZH76) Chromosomal replication initiator protein dnaA|
          Length = 643

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
 Frame = -3

Query: 193 LPLPPAPGNPEGARLMSARVRMPPRPPDAAGFFPALPLEEL----IADVFAVGFGSRVAS 26
           LP PPA     GA + SA    PP    A    P  P   L    + D F +G  +R A 
Sbjct: 264 LPEPPAHRGGPGADMPSAGAPGPPAAQPAPASGPGEPTARLNPKYLFDTFVIGASNRFAH 323

Query: 25  CTLLA 11
              +A
Sbjct: 324 AAAVA 328

>LBD13_ARATH (Q9AT61) LOB domain protein 13|
          Length = 268

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 190 PLPPAPGNPEGARLMSARVRMPPRPP 113
           P PP P  P   RL+S++   PP PP
Sbjct: 194 PPPPPPPTPRPPRLLSSQPAPPPTPP 219

>PER2_HUMAN (O15055) Period circadian protein 2|
          Length = 1255

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -3

Query: 196 SLPLPPAPGNPEGARLMSARVRMPPRPPDAAGFFPALPLE 77
           SLP+ PAPG           V  PP PP A+   PA+P++
Sbjct: 855 SLPVFPAPGT----------VAAPPAPPHASFTVPAVPVD 884

>GLGB_STRAU (P52980) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen|
           branching enzyme) (BE)
           (1,4-alpha-D-glucan:1,4-alpha-D-glucan
           6-glucosyl-transferase)
          Length = 764

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 18/42 (42%), Positives = 21/42 (50%)
 Frame = -3

Query: 199 ESLPLPPAPGNPEGARLMSARVRMPPRPPDAAGFFPALPLEE 74
           ++ P P AP  P+GAR   AR   PP     A   PAL  EE
Sbjct: 14  KAAPEPAAPAAPKGARAPRARRAAPPHGVRPA---PALAAEE 52

>ZYX_MOUSE (Q62523) Zyxin|
          Length = 564

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
 Frame = -3

Query: 199 ESLPLPPAP--GNPEGARLMSARVRMPPRPPDAAGFFPALPLEELIADVF 56
           E  PLPP P  G  + +         PP PP     FP  PLEE   D+F
Sbjct: 69  EDFPLPPPPLIGEGDDSEGALGGAFPPPPPPMIEEPFPPAPLEE---DIF 115

>SLAP1_CLOTM (Q06852) Cell surface glycoprotein 1 precursor (Outer layer protein|
            B) (S-layer protein 1)
          Length = 1664

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +3

Query: 33   TREPNPTANTSAMSSSNGNAGKKPAASGGRGGIRT 137
            T  P PT +T+  S S G+ G      GG G + T
Sbjct: 1382 TTTPTPTPSTTPTSGSGGSGGSGGGGGGGGGTVPT 1416

>SF3A1_MOUSE (Q8K4Z5) Splicing factor 3 subunit 1 (SF3a120)|
          Length = 791

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 19/49 (38%), Positives = 27/49 (55%)
 Frame = -3

Query: 250 TSIPLFSPPV*YSWGSSESLPLPPAPGNPEGARLMSARVRMPPRPPDAA 104
           T+IP  +PP+        S+P PPA   P    ++SA V + PRPP A+
Sbjct: 562 TNIPSSAPPI-------TSVPRPPAMPPPVRTTVVSA-VPVMPRPPMAS 602

>CSKI2_MOUSE (Q8VHK1) Caskin-2|
          Length = 1201

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = -3

Query: 226 PV*YSWGSSESLPLPPAPGNPEGA-RLMSARVRMPPRPPD 110
           P  Y +   ++LP  PAPG P G  R  S     P  PPD
Sbjct: 750 PAPYVFMCPQNLPSSPAPGPPPGVPRAFSYLAGSPAAPPD 789

>MBD6_HUMAN (Q96DN6) Methyl-CpG-binding domain protein 6 (Methyl-CpG-binding|
           protein MBD6)
          Length = 1003

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 22/55 (40%), Positives = 24/55 (43%), Gaps = 12/55 (21%)
 Frame = -3

Query: 190 PLPP-APGNPEGARLMSARVRMPP-----RPPDA------AGFFPALPLEELIAD 62
           P PP APG PEG  L+ A +  PP      PP A      A F P L L     D
Sbjct: 583 PGPPLAPGEPEGPSLLVASLLPPPPSDLLPPPSAPPSNLLASFLPLLALGPTAGD 637

>IRX5_MOUSE (Q9JKQ4) Iroquois-class homeodomain protein IRX-5 (Iroquois|
           homeobox protein 5) (Homeodomain protein IRXB2)
          Length = 484

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
 Frame = -3

Query: 208 GSSESLPLPPAPGNPEGARLMSARVRMPPRP---PDAAGFFP 92
           G SE  P PP PG   G  L  +R    P P   P A   FP
Sbjct: 353 GGSEGSPCPPCPGPMGGQTLGGSRASPAPAPARSPSAQCPFP 394

>PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs)|
          Length = 815

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
 Frame = -3

Query: 247 SIPLFSP---PV*YSWGSSESLPLPPAPGNPEGARLMSARVRMPPRPPDAAGFFPALPL 80
           S+P+ SP   P+    GS    P  P PGNP        + + PP+PP   G     PL
Sbjct: 292 SLPMGSPMGNPI----GSPLGPPSGPGPGNPGNTGGPQQQQQQPPQPPMNNGQMGPPPL 346

>DAAM1_HUMAN (Q9Y4D1) Disheveled-associated activator of morphogenesis 1|
          Length = 1078

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -3

Query: 190 PLPPAPGNPEGARLMSARVRMPPRPPDAAGFFPALP 83
           P P APG P  + +  + +  PP PP   G  P  P
Sbjct: 531 PSPGAPGGPFPSSVPGSLLPPPPPPPLPGGMLPPPP 566

>PRP3_RAT (P04474) Acidic proline-rich protein PRP33 precursor (Proline-rich|
           proteoglycan 1)
          Length = 206

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 184 PPAPGNPEGARLMSARVRMPPRP 116
           PP PGNP+G        + PP+P
Sbjct: 162 PPQPGNPQGPPPQGGHQQRPPQP 184

>ZYX_HUMAN (Q15942) Zyxin (Zyxin-2)|
          Length = 572

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 17/42 (40%), Positives = 20/42 (47%)
 Frame = -3

Query: 193 LPLPPAPGNPEGARLMSARVRMPPRPPDAAGFFPALPLEELI 68
           LP PP  G+ + A   +     PP PP     FP  PLEE I
Sbjct: 73  LPPPPLAGDGDDAE-GALGGAFPPPPPPIEESFPPAPLEEEI 113

>CSKI1_MOUSE (Q6P9K8) Caskin-1 (CASK-interacting protein 1)|
          Length = 1431

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
 Frame = -3

Query: 241  PLFSPPV*YSWGS----SESLPLPPAPGNPEGARLMSARVRMPPRPP 113
            P+ S PV    GS    S+ +PLP  PG+PE  R       + P+PP
Sbjct: 1232 PILSQPVSKIQGSPTPASKKVPLP-GPGSPEVKRAHGTPPPVSPKPP 1277

>WBP11_RAT (Q5PQQ2) WW domain-binding protein 11 (Wbp-11)|
          Length = 641

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 16/43 (37%), Positives = 17/43 (39%)
 Frame = -3

Query: 208 GSSESLPLPPAPGNPEGARLMSARVRMPPRPPDAAGFFPALPL 80
           G    LP P  PG P     M     +PP  P   G FP  PL
Sbjct: 486 GPPPRLPPPAPPGIPPPRPGMMRPPLVPPLGPAPPGLFPPAPL 528

>WBP11_MOUSE (Q923D5) WW domain-binding protein 11 (WBP-11)|
          Length = 641

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 16/43 (37%), Positives = 17/43 (39%)
 Frame = -3

Query: 208 GSSESLPLPPAPGNPEGARLMSARVRMPPRPPDAAGFFPALPL 80
           G    LP P  PG P     M     +PP  P   G FP  PL
Sbjct: 486 GPPPRLPPPAPPGIPPPRPGMMRPPLVPPLGPAPPGLFPPAPL 528

>WBP11_HUMAN (Q9Y2W2) WW domain-binding protein 11 (WBP-11) (SH3 domain-binding|
           protein SNP70) (Npw38-binding protein) (NpwBP)
          Length = 641

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 16/43 (37%), Positives = 17/43 (39%)
 Frame = -3

Query: 208 GSSESLPLPPAPGNPEGARLMSARVRMPPRPPDAAGFFPALPL 80
           G    LP P  PG P     M     +PP  P   G FP  PL
Sbjct: 486 GPPPRLPPPAPPGIPPPRPGMMRPPLVPPLGPAPPGLFPPAPL 528


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,372,345
Number of Sequences: 219361
Number of extensions: 854311
Number of successful extensions: 4036
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 3528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3989
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)