ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bags31l14 |
|---|---|
| Clone Library Name | barley_pub |
>SUGT1_HUMAN (Q9Y2Z0) Suppressor of G2 allele of SKP1 homolog (Sgt1) (Putative| 40-6-3 protein) Length = 364 Score = 97.4 bits (241), Expect(2) = 1e-20 Identities = 45/71 (63%), Positives = 58/71 (81%) Frame = +2 Query: 35 KTGXKDEKLDGDAALNKFFREIYSDADEDMRRAMMKSFVESNGTVLSTNWKDVGKKTVEG 214 K K+EKL+GDAALN+ F++IYSD ++++RAM KSF+ES GTVLSTNW DVGK+ VE Sbjct: 294 KEEEKNEKLEGDAALNRLFQQIYSDGSDEVKRAMNKSFMESGGTVLSTNWSDVGKRKVEI 353 Query: 215 SPPDGMELKKW 247 +PPD ME KK+ Sbjct: 354 NPPDDMEWKKY 364 Score = 21.2 bits (43), Expect(2) = 1e-20 Identities = 6/13 (46%), Positives = 11/13 (84%) Frame = +3 Query: 3 KDWDKLEAEVKKQ 41 ++WDKL E+K++ Sbjct: 284 RNWDKLVGEIKEE 296
>SUGT1_MOUSE (Q9CX34) Suppressor of G2 allele of SKP1 homolog| Length = 335 Score = 97.1 bits (240), Expect(2) = 2e-20 Identities = 45/71 (63%), Positives = 58/71 (81%) Frame = +2 Query: 35 KTGXKDEKLDGDAALNKFFREIYSDADEDMRRAMMKSFVESNGTVLSTNWKDVGKKTVEG 214 K K+EKL+GDAALNK F++IYSD ++++RAM KSF+ES GTVLSTNW DVGK+ VE Sbjct: 265 KEEEKNEKLEGDAALNKLFQQIYSDGSDEVKRAMNKSFMESGGTVLSTNWSDVGKRKVEI 324 Query: 215 SPPDGMELKKW 247 +PPD ME K++ Sbjct: 325 NPPDDMEWKQY 335 Score = 21.2 bits (43), Expect(2) = 2e-20 Identities = 6/13 (46%), Positives = 11/13 (84%) Frame = +3 Query: 3 KDWDKLEAEVKKQ 41 ++WDKL E+K++ Sbjct: 255 RNWDKLVGEIKEE 267
>GIT7_SCHPO (O59709) Glucose insensitive transcription protein 7| Length = 379 Score = 85.1 bits (209), Expect = 9e-17 Identities = 39/67 (58%), Positives = 50/67 (74%) Frame = +2 Query: 47 KDEKLDGDAALNKFFREIYSDADEDMRRAMMKSFVESNGTVLSTNWKDVGKKTVEGSPPD 226 ++++ G+AAL F+ +Y +AD+D RRAMMKS+ ESNGT LSTNWKDV KT E PP Sbjct: 313 EEDEPTGEAALANLFQNLYKNADDDTRRAMMKSYTESNGTALSTNWKDVKSKTFETKPPQ 372 Query: 227 GMELKKW 247 GME KK+ Sbjct: 373 GMEPKKF 379
>SGT1_YEAST (Q08446) Protein SGT1 (Suppressor of G2 allele of SKP1)| Length = 395 Score = 84.3 bits (207), Expect = 2e-16 Identities = 39/67 (58%), Positives = 53/67 (79%), Gaps = 1/67 (1%) Frame = +2 Query: 50 DEKLDGDA-ALNKFFREIYSDADEDMRRAMMKSFVESNGTVLSTNWKDVGKKTVEGSPPD 226 DE+ D +A + + FF+++Y+ AD D +RAMMKSF+ESNGT LST+W+DV K TV+ SPP+ Sbjct: 329 DEEADEEAGSADSFFQKLYAGADPDTKRAMMKSFIESNGTALSTDWEDVSKGTVKTSPPE 388 Query: 227 GMELKKW 247 GME K W Sbjct: 389 GMEPKHW 395
>CYBP_PONPY (Q5R6Z8) Calcyclin-binding protein (CacyBP)| Length = 228 Score = 33.1 bits (74), Expect = 0.43 Identities = 14/36 (38%), Positives = 22/36 (61%) Frame = +2 Query: 50 DEKLDGDAALNKFFREIYSDADEDMRRAMMKSFVES 157 D + D L ++IY D D+DM+R + K++VES Sbjct: 182 DAETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVES 217
>CYBP_HUMAN (Q9HB71) Calcyclin-binding protein (CacyBP) (hCacyBP)| (Siah-interacting protein) (S100A6-binding protein) Length = 228 Score = 33.1 bits (74), Expect = 0.43 Identities = 14/36 (38%), Positives = 22/36 (61%) Frame = +2 Query: 50 DEKLDGDAALNKFFREIYSDADEDMRRAMMKSFVES 157 D + D L ++IY D D+DM+R + K++VES Sbjct: 182 DTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVES 217
>CYBP_MOUSE (Q9CXW3) Calcyclin-binding protein (CacyBP) (Siah-interacting| protein) Length = 229 Score = 33.1 bits (74), Expect = 0.43 Identities = 14/36 (38%), Positives = 22/36 (61%) Frame = +2 Query: 50 DEKLDGDAALNKFFREIYSDADEDMRRAMMKSFVES 157 D + D L ++IY D D+DM+R + K++VES Sbjct: 183 DTEADPSEGLMNVLKKIYEDGDDDMKRTINKAWVES 218
>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein| RCA1 (EC 3.4.24.-) (TAT-binding homolog 12) Length = 825 Score = 32.3 bits (72), Expect = 0.73 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%) Frame = +2 Query: 35 KTGXKDEKLDGDAALNKFFREIYSDADEDMRRAMMKSFVE-SNGTVLSTNWKDVGKKTVE 211 K+G K+E + DA LNK EI +D + + R ++ ++E + + NWK+ +K E Sbjct: 46 KSGNKNEDNNEDAKLNK---EIPTDEEVEAIRKQVEKYIEQTKNNTIPANWKEQKRKIDE 102
>TDX_TRYBR (Q26695) Thioredoxin peroxidase (EC 1.11.1.15) (Peroxiredoxin)| (Thioredoxin-dependent peroxide reductase) (Thiol-specific antioxidant protein) Length = 199 Score = 30.8 bits (68), Expect = 2.1 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +2 Query: 107 DADEDMRRAMMKSFVESNGTVLSTNWKDVGKKTVEGSP 220 + DE +R FVE +G V NWK G KT++ P Sbjct: 152 NVDETLRLVKAFQFVEKHGEVCPANWKP-GSKTMKADP 188
>CEND1_MOUSE (Q8BZ05) Centaurin-delta 1 (Cnt-d1)| Length = 1703 Score = 30.0 bits (66), Expect = 3.6 Identities = 9/25 (36%), Positives = 13/25 (52%) Frame = +1 Query: 421 ATVGNGVSPYLCICGMEVQNVRCNW 495 +T+ N +SPY C G +C W Sbjct: 462 STISNAISPYACFYGSSAAKEKCGW 486
>CTL3_MOUSE (Q921V7) Choline transporter-like protein 3 (Solute carrier family| 44 member 3) Length = 652 Score = 29.3 bits (64), Expect = 6.2 Identities = 18/68 (26%), Positives = 35/68 (51%) Frame = +1 Query: 295 VLTWLQTCKSMLVGLCVSSFCFRICKLFAWQVSF*VLILVLRATVGNGVSPYLCICGMEV 474 +L+ + + ++GLCV +F + LFA++ +LI ++ + V G+ L +CG+ Sbjct: 203 ILSGIMAGRDTILGLCVFTFALSLAMLFAFRFISTLLIHIIISLVILGL---LFVCGV-- 257 Query: 475 QNVRCNWW 498 WW Sbjct: 258 -----LWW 260 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,687,365 Number of Sequences: 219361 Number of extensions: 1503426 Number of successful extensions: 3674 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 3567 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3673 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3581144924 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
