ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags31l13 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF031231.1|AF031231 Triticum aestivum S222 (S222) mRNA, complete cds Length = 1748 Score = 835 bits (421), Expect = 0.0 Identities = 496/521 (95%) Strand = Plus / Plus Query: 1 aaatttatgctgctgattttgccaacgactttgcgctcagctacaactacagctatgatc 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 168 aaatttatgctgctgattttgccaacgactttgcactcagctacaactacagctatgatc 227 Query: 61 cgttagcagaataccttcgcttcatcgataatggcgccttctgtgttgatggtctcttga 120 ||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 228 cgttagcagaatatcttcgcttcatcgacaatggtgccttctgtgttgatggtctcttga 287 Query: 121 ctgatttccctatcactccattagaggccatcggttgctttactaacctgaacaatacca 180 ||||||||||||||||||| |||||||||||||| ||||| | |||||||||||| |||| Sbjct: 288 ctgatttccctatcactccgttagaggccatcggctgcttcagtaacctgaacaacacca 347 Query: 181 aggcagatcatggggcacctctagttatctcccacaatggtgctagtggcgaccatcctg 240 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||| Sbjct: 348 aggcagatcatggggcacctctagttatctcccacaatggtgctagtggtgactaccctg 407 Query: 241 actgcactgacctagcttatcagaaggcagttgctgatggtgcagatgtcattgactgtg 300 |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 408 actgcactgacctagcttatcaaaaggcagttgttgatggtgcagatgtcattgactgtg 467 Query: 301 ctgttcaagtgacaaaagatggcataccaatatgcatgagttccattgacctaatggatg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 468 acgttcaagtgacaaaagatggcataccaatatgcatgagttccattgacctaatggatg 527 Query: 361 tcactactgtcgcatcctcacaattttcttctcaagcgggtgtcataaatgacattaagg 420 |||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct: 528 tcactactgttgcatcctcacaatttgcttctcaagcgggtgtcataagtgacattaagg 587 Query: 421 ctgttgctggagtctataccttcaacctcacttgggaggatattgcaaacaacctgaagc 480 |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 588 ctgttgctggagtctataccttcaacctcacttgggaggacattgccaacaacctgaagc 647 Query: 481 ctatgatatcaaacccatttggcaagtctaccctatcaaga 521 ||||||||||||||||||||||| || || |||||||||| Sbjct: 648 ctatgatatcaaacccatttggccagattagcctatcaaga 688
>ref|XM_466452.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2783 Score = 440 bits (222), Expect = e-120 Identities = 426/494 (86%) Strand = Plus / Plus Query: 4 tttatgctgctgattttgccaacgactttgcgctcagctacaactacagctatgatccgt 63 ||||||| ||||||||||| || |||||| ||||||||||||||||||||||||||| | Sbjct: 1126 tttatgccgctgattttgcaaatgactttttgctcagctacaactacagctatgatccat 1185 Query: 64 tagcagaataccttcgcttcatcgataatggcgccttctgtgttgatggtctcttgactg 123 || ||||||| ||| |||||| |||||||| ||||||| |||||| ||| | ||||||| Sbjct: 1186 taacagaatatcttaacttcattgataatggtgccttctctgttgacggtgtattgactg 1245 Query: 124 atttccctatcactccattagaggccatcggttgctttactaacctgaacaataccaagg 183 |||||||||| || || | ||||||||| |||||||||| |||||| ||||| | |||| Sbjct: 1246 atttccctattaccccttcagaggccattggttgctttagtaacctcaacaacagcaaga 1305 Query: 184 cagatcatggggcacctctagttatctcccacaatggtgctagtggcgaccatcctgact 243 |||| ||| | |||||| | ||||||||||||||||||||||| ||| | || || | Sbjct: 1306 cagacaatgcgaaacctctcatcatctcccacaatggtgctagtggtgactacccagatt 1365 Query: 244 gcactgacctagcttatcagaaggcagttgctgatggtgcagatgtcattgactgtgctg 303 ||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| | | Sbjct: 1366 gcactgacctagcttatcaaaaggcagttactgatggtgcagatgtcatcgactgtcccg 1425 Query: 304 ttcaagtgacaaaagatggcataccaatatgcatgagttccattgacctaatggatgtca 363 | ||||| || |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1426 tacaagtaaccaaagatggcatacctatatgcatgagttccattgacctaatggatgtca 1485 Query: 364 ctactgtcgcatcctcacaattttcttctcaagcgggtgtcataaatgacattaaggctg 423 ||||||| || | |||||||||||||||||| || ||||||||| || || ||| || Sbjct: 1486 ctactgtttcaacgtcacaattttcttctcaaacgactgtcataaaagatatcaagaatg 1545 Query: 424 ttgctggagtctataccttcaacctcacttgggaggatattgcaaacaacctgaagccta 483 ||||||||||||| ||||||||||||| ||||| |||||||| || ||||||||||| | Sbjct: 1546 gtgctggagtctattccttcaacctcacatgggatgatattgcgaagaacctgaagccca 1605 Query: 484 tgatatcaaaccca 497 ||||||||||||| Sbjct: 1606 agatatcaaaccca 1619
>ref|XM_506842.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0046O12.21 mRNA Length = 2827 Score = 440 bits (222), Expect = e-120 Identities = 426/494 (86%) Strand = Plus / Plus Query: 4 tttatgctgctgattttgccaacgactttgcgctcagctacaactacagctatgatccgt 63 ||||||| ||||||||||| || |||||| ||||||||||||||||||||||||||| | Sbjct: 1138 tttatgccgctgattttgcaaatgactttttgctcagctacaactacagctatgatccat 1197 Query: 64 tagcagaataccttcgcttcatcgataatggcgccttctgtgttgatggtctcttgactg 123 || ||||||| ||| |||||| |||||||| ||||||| |||||| ||| | ||||||| Sbjct: 1198 taacagaatatcttaacttcattgataatggtgccttctctgttgacggtgtattgactg 1257 Query: 124 atttccctatcactccattagaggccatcggttgctttactaacctgaacaataccaagg 183 |||||||||| || || | ||||||||| |||||||||| |||||| ||||| | |||| Sbjct: 1258 atttccctattaccccttcagaggccattggttgctttagtaacctcaacaacagcaaga 1317 Query: 184 cagatcatggggcacctctagttatctcccacaatggtgctagtggcgaccatcctgact 243 |||| ||| | |||||| | ||||||||||||||||||||||| ||| | || || | Sbjct: 1318 cagacaatgcgaaacctctcatcatctcccacaatggtgctagtggtgactacccagatt 1377 Query: 244 gcactgacctagcttatcagaaggcagttgctgatggtgcagatgtcattgactgtgctg 303 ||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| | | Sbjct: 1378 gcactgacctagcttatcaaaaggcagttactgatggtgcagatgtcatcgactgtcccg 1437 Query: 304 ttcaagtgacaaaagatggcataccaatatgcatgagttccattgacctaatggatgtca 363 | ||||| || |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1438 tacaagtaaccaaagatggcatacctatatgcatgagttccattgacctaatggatgtca 1497 Query: 364 ctactgtcgcatcctcacaattttcttctcaagcgggtgtcataaatgacattaaggctg 423 ||||||| || | |||||||||||||||||| || ||||||||| || || ||| || Sbjct: 1498 ctactgtttcaacgtcacaattttcttctcaaacgactgtcataaaagatatcaagaatg 1557 Query: 424 ttgctggagtctataccttcaacctcacttgggaggatattgcaaacaacctgaagccta 483 ||||||||||||| ||||||||||||| ||||| |||||||| || ||||||||||| | Sbjct: 1558 gtgctggagtctattccttcaacctcacatgggatgatattgcgaagaacctgaagccca 1617 Query: 484 tgatatcaaaccca 497 ||||||||||||| Sbjct: 1618 agatatcaaaccca 1631
>dbj|AK100542.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023102L08, full insert sequence Length = 2782 Score = 440 bits (222), Expect = e-120 Identities = 426/494 (86%) Strand = Plus / Plus Query: 4 tttatgctgctgattttgccaacgactttgcgctcagctacaactacagctatgatccgt 63 ||||||| ||||||||||| || |||||| ||||||||||||||||||||||||||| | Sbjct: 1126 tttatgccgctgattttgcaaatgactttttgctcagctacaactacagctatgatccat 1185 Query: 64 tagcagaataccttcgcttcatcgataatggcgccttctgtgttgatggtctcttgactg 123 || ||||||| ||| |||||| |||||||| ||||||| |||||| ||| | ||||||| Sbjct: 1186 taacagaatatcttaacttcattgataatggtgccttctctgttgacggtgtattgactg 1245 Query: 124 atttccctatcactccattagaggccatcggttgctttactaacctgaacaataccaagg 183 |||||||||| || || | ||||||||| |||||||||| |||||| ||||| | |||| Sbjct: 1246 atttccctattaccccttcagaggccattggttgctttagtaacctcaacaacagcaaga 1305 Query: 184 cagatcatggggcacctctagttatctcccacaatggtgctagtggcgaccatcctgact 243 |||| ||| | |||||| | ||||||||||||||||||||||| ||| | || || | Sbjct: 1306 cagacaatgcgaaacctctcatcatctcccacaatggtgctagtggtgactacccagatt 1365 Query: 244 gcactgacctagcttatcagaaggcagttgctgatggtgcagatgtcattgactgtgctg 303 ||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| | | Sbjct: 1366 gcactgacctagcttatcaaaaggcagttactgatggtgcagatgtcatcgactgtcccg 1425 Query: 304 ttcaagtgacaaaagatggcataccaatatgcatgagttccattgacctaatggatgtca 363 | ||||| || |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1426 tacaagtaaccaaagatggcatacctatatgcatgagttccattgacctaatggatgtca 1485 Query: 364 ctactgtcgcatcctcacaattttcttctcaagcgggtgtcataaatgacattaaggctg 423 ||||||| || | |||||||||||||||||| || ||||||||| || || ||| || Sbjct: 1486 ctactgtttcaacgtcacaattttcttctcaaacgactgtcataaaagatatcaagaatg 1545 Query: 424 ttgctggagtctataccttcaacctcacttgggaggatattgcaaacaacctgaagccta 483 ||||||||||||| ||||||||||||| ||||| |||||||| || ||||||||||| | Sbjct: 1546 gtgctggagtctattccttcaacctcacatgggatgatattgcgaagaacctgaagccca 1605 Query: 484 tgatatcaaaccca 497 ||||||||||||| Sbjct: 1606 agatatcaaaccca 1619
>dbj|AK100170.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025E23, full insert sequence Length = 2824 Score = 424 bits (214), Expect = e-115 Identities = 425/494 (86%), Gaps = 1/494 (0%) Strand = Plus / Plus Query: 4 tttatgctgctgattttgccaacgactttgcgctcagctacaactacagctatgatccgt 63 ||||||| ||||||||||| || |||||| ||||||||||||||||||||||||||| | Sbjct: 1136 tttatgccgctgattttgcaaatgactttttgctcagctacaactacagctatgatccat 1195 Query: 64 tagcagaataccttcgcttcatcgataatggcgccttctgtgttgatggtctcttgactg 123 || ||||||| ||| |||||| |||||||| ||||||| |||||| | | | ||||||| Sbjct: 1196 taacagaatatcttaacttcattgataatggtgccttctctgttgacg-tgtattgactg 1254 Query: 124 atttccctatcactccattagaggccatcggttgctttactaacctgaacaataccaagg 183 |||||||||| || || | ||||||||| |||||||||| |||||| ||||| | |||| Sbjct: 1255 atttccctattaccccttcagaggccattggttgctttagtaacctcaacaacagcaaga 1314 Query: 184 cagatcatggggcacctctagttatctcccacaatggtgctagtggcgaccatcctgact 243 |||| ||| | |||||| | ||||||||||||||||||||||| ||| | || || | Sbjct: 1315 cagacaatgcgaaacctctcatcatctcccacaatggtgctagtggtgactacccagatt 1374 Query: 244 gcactgacctagcttatcagaaggcagttgctgatggtgcagatgtcattgactgtgctg 303 ||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| | | Sbjct: 1375 gcactgacctagcttatcaaaaggcagttactgatggtgcagatgtcatcgactgtcccg 1434 Query: 304 ttcaagtgacaaaagatggcataccaatatgcatgagttccattgacctaatggatgtca 363 | ||||| || |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1435 tacaagtaaccaaagatggcatacctatatgcatgagttccattgacctaatggatgtca 1494 Query: 364 ctactgtcgcatcctcacaattttcttctcaagcgggtgtcataaatgacattaaggctg 423 ||||||| || | |||||||||||||||||| || ||||||||| || || ||| || Sbjct: 1495 ctactgtttcaacgtcacaattttcttctcaaacgactgtcataaaagatatcaagaatg 1554 Query: 424 ttgctggagtctataccttcaacctcacttgggaggatattgcaaacaacctgaagccta 483 ||||||||||||| ||||||||||||| ||||| |||||||| || ||||||||||| | Sbjct: 1555 gtgctggagtctattccttcaacctcacatgggatgatattgcgaagaacctgaagccca 1614 Query: 484 tgatatcaaaccca 497 ||||||||||||| Sbjct: 1615 agatatcaaaccca 1628
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 289 bits (146), Expect = 5e-75 Identities = 242/274 (88%) Strand = Plus / Plus Query: 207 atctcccacaatggtgctagtggcgaccatcctgactgcactgacctagcttatcagaag 266 ||||||||||||||||||||||| ||| | || || |||||||||||||||||||| ||| Sbjct: 22709242 atctcccacaatggtgctagtggtgactacccagattgcactgacctagcttatcaaaag 22709301 Query: 267 gcagttgctgatggtgcagatgtcattgactgtgctgttcaagtgacaaaagatggcata 326 |||||| ||||||||||||||||||| |||||| | || ||||| || |||||||||||| Sbjct: 22709302 gcagttactgatggtgcagatgtcatcgactgtcccgtacaagtaaccaaagatggcata 22709361 Query: 327 ccaatatgcatgagttccattgacctaatggatgtcactactgtcgcatcctcacaattt 386 || ||||||||||||||||||||||||||||||||||||||||| || | ||||||||| Sbjct: 22709362 cctatatgcatgagttccattgacctaatggatgtcactactgtttcaacgtcacaattt 22709421 Query: 387 tcttctcaagcgggtgtcataaatgacattaaggctgttgctggagtctataccttcaac 446 ||||||||| || ||||||||| || || ||| || ||||||||||||| |||||||| Sbjct: 22709422 tcttctcaaacgactgtcataaaagatatcaagaatggtgctggagtctattccttcaac 22709481 Query: 447 ctcacttgggaggatattgcaaacaacctgaagc 480 ||||| ||||| |||||||| || |||||||||| Sbjct: 22709482 ctcacatgggatgatattgcgaagaacctgaagc 22709515 Score = 135 bits (68), Expect = 2e-28 Identities = 128/148 (86%) Strand = Plus / Plus Query: 4 tttatgctgctgattttgccaacgactttgcgctcagctacaactacagctatgatccgt 63 ||||||| ||||||||||| || |||||| ||||||||||||||||||||||||||| | Sbjct: 22708853 tttatgccgctgattttgcaaatgactttttgctcagctacaactacagctatgatccat 22708912 Query: 64 tagcagaataccttcgcttcatcgataatggcgccttctgtgttgatggtctcttgactg 123 || ||||||| ||| |||||| |||||||| ||||||| |||||| ||| | ||||||| Sbjct: 22708913 taacagaatatcttaacttcattgataatggtgccttctctgttgacggtgtattgactg 22708972 Query: 124 atttccctatcactccattagaggccat 151 |||||||||| || || | ||||||||| Sbjct: 22708973 atttccctattaccccttcagaggccat 22709000
>dbj|AP005643.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0046O12 Length = 128223 Score = 289 bits (146), Expect = 5e-75 Identities = 242/274 (88%) Strand = Plus / Plus Query: 207 atctcccacaatggtgctagtggcgaccatcctgactgcactgacctagcttatcagaag 266 ||||||||||||||||||||||| ||| | || || |||||||||||||||||||| ||| Sbjct: 68038 atctcccacaatggtgctagtggtgactacccagattgcactgacctagcttatcaaaag 68097 Query: 267 gcagttgctgatggtgcagatgtcattgactgtgctgttcaagtgacaaaagatggcata 326 |||||| ||||||||||||||||||| |||||| | || ||||| || |||||||||||| Sbjct: 68098 gcagttactgatggtgcagatgtcatcgactgtcccgtacaagtaaccaaagatggcata 68157 Query: 327 ccaatatgcatgagttccattgacctaatggatgtcactactgtcgcatcctcacaattt 386 || ||||||||||||||||||||||||||||||||||||||||| || | ||||||||| Sbjct: 68158 cctatatgcatgagttccattgacctaatggatgtcactactgtttcaacgtcacaattt 68217 Query: 387 tcttctcaagcgggtgtcataaatgacattaaggctgttgctggagtctataccttcaac 446 ||||||||| || ||||||||| || || ||| || ||||||||||||| |||||||| Sbjct: 68218 tcttctcaaacgactgtcataaaagatatcaagaatggtgctggagtctattccttcaac 68277 Query: 447 ctcacttgggaggatattgcaaacaacctgaagc 480 ||||| ||||| |||||||| || |||||||||| Sbjct: 68278 ctcacatgggatgatattgcgaagaacctgaagc 68311 Score = 135 bits (68), Expect = 2e-28 Identities = 128/148 (86%) Strand = Plus / Plus Query: 4 tttatgctgctgattttgccaacgactttgcgctcagctacaactacagctatgatccgt 63 ||||||| ||||||||||| || |||||| ||||||||||||||||||||||||||| | Sbjct: 67649 tttatgccgctgattttgcaaatgactttttgctcagctacaactacagctatgatccat 67708 Query: 64 tagcagaataccttcgcttcatcgataatggcgccttctgtgttgatggtctcttgactg 123 || ||||||| ||| |||||| |||||||| ||||||| |||||| ||| | ||||||| Sbjct: 67709 taacagaatatcttaacttcattgataatggtgccttctctgttgacggtgtattgactg 67768 Query: 124 atttccctatcactccattagaggccat 151 |||||||||| || || | ||||||||| Sbjct: 67769 atttccctattaccccttcagaggccat 67796
>ref|XM_472836.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2223 Score = 206 bits (104), Expect = 5e-50 Identities = 296/360 (82%) Strand = Plus / Plus Query: 1 aaatttatgctgctgattttgccaacgactttgcgctcagctacaactacagctatgatc 60 ||||||||||||| || |||||||| |||||| | |||| |||||| | |||||||||| Sbjct: 857 aaatttatgctgccgactttgccaatgactttatgttcagttacaaccatagctatgatc 916 Query: 61 cgttagcagaataccttcgcttcatcgataatggcgccttctgtgttgatggtctcttga 120 | ||||||||||| || ||||| || ||||| || |||| ||||||||| | |||| Sbjct: 917 cattagcagaatatctctcattcattgacaatggtgctttctctgttgatggagtattga 976 Query: 121 ctgatttccctatcactccattagaggccatcggttgctttactaacctgaacaatacca 180 ||||||| ||| | || || | ||| ||||| || ||||||||||| ||||| || | || Sbjct: 977 ctgattttcctgttacaccttcagaagccataggctgctttactaatctgaagaaaagca 1036 Query: 181 aggcagatcatggggcacctctagttatctcccacaatggtgctagtggcgaccatcctg 240 | |||||||||| |||||| |||| |||||||||||||||||||| || | || | Sbjct: 1037 aaacagatcatggaaagcctctaattatttcccacaatggtgctagtggggattacccag 1096 Query: 241 actgcactgacctagcttatcagaaggcagttgctgatggtgcagatgtcattgactgtg 300 ||||||||| ||||||||||| || ||||||| ||||||||| ||||||||||| || Sbjct: 1097 cctgcactgatctagcttatcaaaaagcagttgatgatggtgccgatgtcattgattgcc 1156 Query: 301 ctgttcaagtgacaaaagatggcataccaatatgcatgagttccattgacctaatggatg 360 |||| ||| |||| ||||||||||||||||||||||||||||||||| || | ||||||| Sbjct: 1157 ctgtccaattgaccaaagatggcataccaatatgcatgagttccattaacttgatggatg 1216 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 429 ggagtctataccttcaacctcacttggga 457 ||||||| |||||||||||| |||||||| Sbjct: 1285 ggagtctttaccttcaaccttacttggga 1313
>dbj|AK070339.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048K03, full insert sequence Length = 2493 Score = 206 bits (104), Expect = 5e-50 Identities = 296/360 (82%) Strand = Plus / Plus Query: 1 aaatttatgctgctgattttgccaacgactttgcgctcagctacaactacagctatgatc 60 ||||||||||||| || |||||||| |||||| | |||| |||||| | |||||||||| Sbjct: 975 aaatttatgctgccgactttgccaatgactttatgttcagttacaaccatagctatgatc 1034 Query: 61 cgttagcagaataccttcgcttcatcgataatggcgccttctgtgttgatggtctcttga 120 | ||||||||||| || ||||| || ||||| || |||| ||||||||| | |||| Sbjct: 1035 cattagcagaatatctctcattcattgacaatggtgctttctctgttgatggagtattga 1094 Query: 121 ctgatttccctatcactccattagaggccatcggttgctttactaacctgaacaatacca 180 ||||||| ||| | || || | ||| ||||| || ||||||||||| ||||| || | || Sbjct: 1095 ctgattttcctgttacaccttcagaagccataggctgctttactaatctgaagaaaagca 1154 Query: 181 aggcagatcatggggcacctctagttatctcccacaatggtgctagtggcgaccatcctg 240 | |||||||||| |||||| |||| |||||||||||||||||||| || | || | Sbjct: 1155 aaacagatcatggaaagcctctaattatttcccacaatggtgctagtggggattacccag 1214 Query: 241 actgcactgacctagcttatcagaaggcagttgctgatggtgcagatgtcattgactgtg 300 ||||||||| ||||||||||| || ||||||| ||||||||| ||||||||||| || Sbjct: 1215 cctgcactgatctagcttatcaaaaagcagttgatgatggtgccgatgtcattgattgcc 1274 Query: 301 ctgttcaagtgacaaaagatggcataccaatatgcatgagttccattgacctaatggatg 360 |||| ||| |||| ||||||||||||||||||||||||||||||||| || | ||||||| Sbjct: 1275 ctgtccaattgaccaaagatggcataccaatatgcatgagttccattaacttgatggatg 1334 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 429 ggagtctataccttcaacctcacttggga 457 ||||||| |||||||||||| |||||||| Sbjct: 1403 ggagtctttaccttcaaccttacttggga 1431
>dbj|AK070336.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047B14, full insert sequence Length = 1581 Score = 176 bits (89), Expect = 5e-41 Identities = 254/309 (82%) Strand = Plus / Plus Query: 52 gctatgatccgttagcagaataccttcgcttcatcgataatggcgccttctgtgttgatg 111 |||||||||| ||||||||||| || ||||| || ||||| || |||| |||||||| Sbjct: 1 gctatgatccattagcagaatatctctcattcattgacaatggtgctttctctgttgatg 60 Query: 112 gtctcttgactgatttccctatcactccattagaggccatcggttgctttactaacctga 171 | | ||||||||||| ||| | || || | ||| ||||| || ||||||||||| |||| Sbjct: 61 gagtattgactgattttcctgttacaccttcagaagccataggctgctttactaatctga 120 Query: 172 acaataccaaggcagatcatggggcacctctagttatctcccacaatggtgctagtggcg 231 | || | ||| |||||||||| |||||| |||| |||||||||||||||||||| | Sbjct: 121 agaaaagcaaaacagatcatggaaagcctctaattatttcccacaatggtgctagtgggg 180 Query: 232 accatcctgactgcactgacctagcttatcagaaggcagttgctgatggtgcagatgtca 291 | | || | ||||||||| ||||||||||| || ||||||| ||||||||| ||||||| Sbjct: 181 attacccagcctgcactgatctagcttatcaaaaagcagttgatgatggtgccgatgtca 240 Query: 292 ttgactgtgctgttcaagtgacaaaagatggcataccaatatgcatgagttccattgacc 351 |||| || |||| ||| |||| ||||||||||||||||||||||||||||||||| || Sbjct: 241 ttgattgccctgtccaattgaccaaagatggcataccaatatgcatgagttccattaact 300 Query: 352 taatggatg 360 | ||||||| Sbjct: 301 tgatggatg 309 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 429 ggagtctataccttcaacctcacttggga 457 ||||||| |||||||||||| |||||||| Sbjct: 378 ggagtctttaccttcaaccttacttggga 406
>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23, complete sequence Length = 130273 Score = 149 bits (75), Expect = 1e-32 Identities = 141/163 (86%) Strand = Plus / Plus Query: 198 cctctagttatctcccacaatggtgctagtggcgaccatcctgactgcactgacctagct 257 |||||| |||| |||||||||||||||||||| || | || | ||||||||| |||||| Sbjct: 26968 cctctaattatttcccacaatggtgctagtggggattacccagcctgcactgatctagct 27027 Query: 258 tatcagaaggcagttgctgatggtgcagatgtcattgactgtgctgttcaagtgacaaaa 317 ||||| || ||||||| ||||||||| ||||||||||| || |||| ||| |||| ||| Sbjct: 27028 tatcaaaaagcagttgatgatggtgccgatgtcattgattgccctgtccaattgaccaaa 27087 Query: 318 gatggcataccaatatgcatgagttccattgacctaatggatg 360 |||||||||||||||||||||||||||||| || | ||||||| Sbjct: 27088 gatggcataccaatatgcatgagttccattaacttgatggatg 27130 Score = 69.9 bits (35), Expect = 8e-09 Identities = 104/127 (81%) Strand = Plus / Plus Query: 1 aaatttatgctgctgattttgccaacgactttgcgctcagctacaactacagctatgatc 60 ||||||||||||| || |||||||| |||||| | |||| |||||| | |||||||||| Sbjct: 26592 aaatttatgctgccgactttgccaatgactttatgttcagttacaaccatagctatgatc 26651 Query: 61 cgttagcagaataccttcgcttcatcgataatggcgccttctgtgttgatggtctcttga 120 | ||||||||||| || ||||| || ||||| || |||| ||||||||| | |||| Sbjct: 26652 cattagcagaatatctctcattcattgacaatggtgctttctctgttgatggagtattga 26711 Query: 121 ctgattt 127 ||||||| Sbjct: 26712 ctgattt 26718 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 429 ggagtctataccttcaacctcacttggga 457 ||||||| |||||||||||| |||||||| Sbjct: 27199 ggagtctttaccttcaaccttacttggga 27227
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 149 bits (75), Expect = 1e-32 Identities = 141/163 (86%) Strand = Plus / Plus Query: 198 cctctagttatctcccacaatggtgctagtggcgaccatcctgactgcactgacctagct 257 |||||| |||| |||||||||||||||||||| || | || | ||||||||| |||||| Sbjct: 23584287 cctctaattatttcccacaatggtgctagtggggattacccagcctgcactgatctagct 23584346 Query: 258 tatcagaaggcagttgctgatggtgcagatgtcattgactgtgctgttcaagtgacaaaa 317 ||||| || ||||||| ||||||||| ||||||||||| || |||| ||| |||| ||| Sbjct: 23584347 tatcaaaaagcagttgatgatggtgccgatgtcattgattgccctgtccaattgaccaaa 23584406 Query: 318 gatggcataccaatatgcatgagttccattgacctaatggatg 360 |||||||||||||||||||||||||||||| || | ||||||| Sbjct: 23584407 gatggcataccaatatgcatgagttccattaacttgatggatg 23584449 Score = 69.9 bits (35), Expect = 8e-09 Identities = 104/127 (81%) Strand = Plus / Plus Query: 1 aaatttatgctgctgattttgccaacgactttgcgctcagctacaactacagctatgatc 60 ||||||||||||| || |||||||| |||||| | |||| |||||| | |||||||||| Sbjct: 23583911 aaatttatgctgccgactttgccaatgactttatgttcagttacaaccatagctatgatc 23583970 Query: 61 cgttagcagaataccttcgcttcatcgataatggcgccttctgtgttgatggtctcttga 120 | ||||||||||| || ||||| || ||||| || |||| ||||||||| | |||| Sbjct: 23583971 cattagcagaatatctctcattcattgacaatggtgctttctctgttgatggagtattga 23584030 Query: 121 ctgattt 127 ||||||| Sbjct: 23584031 ctgattt 23584037 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 429 ggagtctataccttcaacctcacttggga 457 ||||||| |||||||||||| |||||||| Sbjct: 23584518 ggagtctttaccttcaaccttacttggga 23584546
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 95.6 bits (48), Expect = 1e-16 Identities = 123/148 (83%) Strand = Plus / Minus Query: 205 ttatctcccacaatggtgctagtggcgaccatcctgactgcactgacctagcttatcaga 264 ||||||| || |||||||||||||| || | || ||||| || || || |||||| ||| Sbjct: 15942226 ttatctcacataatggtgctagtggagattacccggactgtacggatcttgcttatgaga 15942167 Query: 265 aggcagttgctgatggtgcagatgtcattgactgtgctgttcaagtgacaaaagatggca 324 ||||||||| |||||||||||||||||||||||| | | || |||| |||||||| | Sbjct: 15942166 aggcagttggagatggtgcagatgtcattgactgttccatcgaaatgaccaaagatggaa 15942107 Query: 325 taccaatatgcatgagttccattgacct 352 | || |||||||||||||||||| |||| Sbjct: 15942106 ttcctatatgcatgagttccattaacct 15942079
>dbj|AK119478.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-B10, full insert sequence Length = 1533 Score = 95.6 bits (48), Expect = 1e-16 Identities = 123/148 (83%) Strand = Plus / Plus Query: 205 ttatctcccacaatggtgctagtggcgaccatcctgactgcactgacctagcttatcaga 264 ||||||| || |||||||||||||| || | || ||||| || || || |||||| ||| Sbjct: 155 ttatctcacataatggtgctagtggagattacccggactgtacggatcttgcttatgaga 214 Query: 265 aggcagttgctgatggtgcagatgtcattgactgtgctgttcaagtgacaaaagatggca 324 ||||||||| |||||||||||||||||||||||| | | || |||| |||||||| | Sbjct: 215 aggcagttggagatggtgcagatgtcattgactgttccatcgaaatgaccaaagatggaa 274 Query: 325 taccaatatgcatgagttccattgacct 352 | || |||||||||||||||||| |||| Sbjct: 275 ttcctatatgcatgagttccattaacct 302
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 95.6 bits (48), Expect = 1e-16 Identities = 123/148 (83%) Strand = Plus / Minus Query: 205 ttatctcccacaatggtgctagtggcgaccatcctgactgcactgacctagcttatcaga 264 ||||||| || |||||||||||||| || | || ||||| || || || |||||| ||| Sbjct: 15895459 ttatctcacataatggtgctagtggagattacccggactgtacggatcttgcttatgaga 15895400 Query: 265 aggcagttgctgatggtgcagatgtcattgactgtgctgttcaagtgacaaaagatggca 324 ||||||||| |||||||||||||||||||||||| | | || |||| |||||||| | Sbjct: 15895399 aggcagttggagatggtgcagatgtcattgactgttccatcgaaatgaccaaagatggaa 15895340 Query: 325 taccaatatgcatgagttccattgacct 352 | || |||||||||||||||||| |||| Sbjct: 15895339 ttcctatatgcatgagttccattaacct 15895312
>emb|AL772415.6|CNS08C9T Oryza sativa chromosome 12, . BAC OSJNBa0060H23 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 153350 Score = 95.6 bits (48), Expect = 1e-16 Identities = 123/148 (83%) Strand = Plus / Minus Query: 205 ttatctcccacaatggtgctagtggcgaccatcctgactgcactgacctagcttatcaga 264 ||||||| || |||||||||||||| || | || ||||| || || || |||||| ||| Sbjct: 9639 ttatctcacataatggtgctagtggagattacccggactgtacggatcttgcttatgaga 9580 Query: 265 aggcagttgctgatggtgcagatgtcattgactgtgctgttcaagtgacaaaagatggca 324 ||||||||| |||||||||||||||||||||||| | | || |||| |||||||| | Sbjct: 9579 aggcagttggagatggtgcagatgtcattgactgttccatcgaaatgaccaaagatggaa 9520 Query: 325 taccaatatgcatgagttccattgacct 352 | || |||||||||||||||||| |||| Sbjct: 9519 ttcctatatgcatgagttccattaacct 9492
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 73.8 bits (37), Expect = 5e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 276 gatggtgcagatgtcattgactgtgctgttcaagtgacaaaagatggcataccaatatgc 335 |||||||| ||||| ||||||||| | ||||| |||| |||||||| || || |||||| Sbjct: 10349495 gatggtgccgatgttattgactgttccattcaaatgaccaaagatggaattcctatatgc 10349436 Query: 336 atgagttccattgacct 352 ||||||||||||||||| Sbjct: 10349435 atgagttccattgacct 10349419
>dbj|AP005091.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1104_G11 Length = 140093 Score = 73.8 bits (37), Expect = 5e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 276 gatggtgcagatgtcattgactgtgctgttcaagtgacaaaagatggcataccaatatgc 335 |||||||| ||||| ||||||||| | ||||| |||| |||||||| || || |||||| Sbjct: 57200 gatggtgccgatgttattgactgttccattcaaatgaccaaagatggaattcctatatgc 57141 Query: 336 atgagttccattgacct 352 ||||||||||||||||| Sbjct: 57140 atgagttccattgacct 57124
>gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence Length = 405672 Score = 65.9 bits (33), Expect = 1e-07 Identities = 99/121 (81%) Strand = Plus / Plus Query: 202 tagttatctcccacaatggtgctagtggcgaccatcctgactgcactgacctagcttatc 261 |||||||||| || |||||||||||||| ||| | || ||||| || ||| | || || | Sbjct: 142490 tagttatctcacataatggtgctagtggagactacccggactgtacagacttggcctacc 142549 Query: 262 agaaggcagttgctgatggtgcagatgtcattgactgtgctgttcaagtgacaaaagatg 321 | | ||| ||| |||||||||||| ||||||||||| || ||||||||||||| |||| Sbjct: 142550 atagtgcaattgatgatggtgcagacatcattgactgtcctattcaagtgacaaatgatg 142609 Query: 322 g 322 | Sbjct: 142610 g 142610 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 45 aactacagctatgatccgttagcagaatacct 76 |||||||||||||||||||| ||||||||||| Sbjct: 139685 aactacagctatgatccgttggcagaatacct 139716
>gb|AY664415.1| Zea mays cultivar B73 locus 9009, complete sequence Length = 323584 Score = 65.9 bits (33), Expect = 1e-07 Identities = 99/121 (81%) Strand = Plus / Plus Query: 202 tagttatctcccacaatggtgctagtggcgaccatcctgactgcactgacctagcttatc 261 |||||||||| || |||||||||||||| ||| | || ||||| || ||| | || || | Sbjct: 130491 tagttatctcacataatggtgctagtggagactacccggactgtacagacttggcctacc 130550 Query: 262 agaaggcagttgctgatggtgcagatgtcattgactgtgctgttcaagtgacaaaagatg 321 | | ||| ||| |||||||||||| ||||||||||| || ||||||||||||| |||| Sbjct: 130551 atagtgcaattgatgatggtgcagacatcattgactgtcctattcaagtgacaaatgatg 130610 Query: 322 g 322 | Sbjct: 130611 g 130611 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 45 aactacagctatgatccgttagcagaataccttcgcttcatcgataatggcgccttctgt 104 |||||||||||||||||||| ||||||||||| ||| ||| || |||| | ||||| | Sbjct: 127686 aactacagctatgatccgttggcagaatacctgaactttatcaatgatggtggcttctct 127745 Query: 105 gttgatggt 113 ||||||||| Sbjct: 127746 gttgatggt 127754
>ref|XM_483218.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2686 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 205 ttatctcccacaatggtgctagtggcgaccatcctgactgcactgacctagcttatcaga 264 ||||||| ||||||||||||||||| ||| | || ||||| || || | |||||||||| Sbjct: 1145 ttatctcgcacaatggtgctagtggagactacccagactgtacggatttggcttatcaga 1204 Query: 265 aggcagttgctgatggtgcagatgtcattga 295 | || |||| |||||| || ||||||||||| Sbjct: 1205 aagcggttgatgatggcgccgatgtcattga 1235
>ref|XM_507284.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1506_F01.22 patrial mRNA Length = 2702 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 205 ttatctcccacaatggtgctagtggcgaccatcctgactgcactgacctagcttatcaga 264 ||||||| ||||||||||||||||| ||| | || ||||| || || | |||||||||| Sbjct: 1145 ttatctcgcacaatggtgctagtggagactacccagactgtacggatttggcttatcaga 1204 Query: 265 aggcagttgctgatggtgcagatgtcattga 295 | || |||| |||||| || ||||||||||| Sbjct: 1205 aagcggttgatgatggcgccgatgtcattga 1235
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 205 ttatctcccacaatggtgctagtggcgaccatcctgactgcactgacctagcttatcaga 264 ||||||| ||||||||||||||||| ||| | || ||||| || || | |||||||||| Sbjct: 24862388 ttatctcgcacaatggtgctagtggagactacccagactgtacggatttggcttatcaga 24862447 Query: 265 aggcagttgctgatggtgcagatgtcattga 295 | || |||| |||||| || ||||||||||| Sbjct: 24862448 aagcggttgatgatggcgccgatgtcattga 24862478
>dbj|AP004190.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1506_F01 Length = 121202 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 205 ttatctcccacaatggtgctagtggcgaccatcctgactgcactgacctagcttatcaga 264 ||||||| ||||||||||||||||| ||| | || ||||| || || | |||||||||| Sbjct: 66834 ttatctcgcacaatggtgctagtggagactacccagactgtacggatttggcttatcaga 66893 Query: 265 aggcagttgctgatggtgcagatgtcattga 295 | || |||| |||||| || ||||||||||| Sbjct: 66894 aagcggttgatgatggcgccgatgtcattga 66924
>dbj|AK065539.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013030N03, full insert sequence Length = 2801 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 205 ttatctcccacaatggtgctagtggcgaccatcctgactgcactgacctagcttatcaga 264 ||||||| ||||||||||||||||| ||| | || ||||| || || | |||||||||| Sbjct: 1244 ttatctcgcacaatggtgctagtggagactacccagactgtacggatttggcttatcaga 1303 Query: 265 aggcagttgctgatggtgcagatgtcattga 295 | || |||| |||||| || ||||||||||| Sbjct: 1304 aagcggttgatgatggcgccgatgtcattga 1334
>dbj|AK065218.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002G11, full insert sequence Length = 2803 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 205 ttatctcccacaatggtgctagtggcgaccatcctgactgcactgacctagcttatcaga 264 ||||||| ||||||||||||||||| ||| | || ||||| || || | |||||||||| Sbjct: 1262 ttatctcgcacaatggtgctagtggagactacccagactgtacggatttggcttatcaga 1321 Query: 265 aggcagttgctgatggtgcagatgtcattga 295 | || |||| |||||| || ||||||||||| Sbjct: 1322 aagcggttgatgatggcgccgatgtcattga 1352
>ref|XM_965178.1| PREDICTED: Tribolium castaneum similar to CG2194-PB, isoform B (LOC658821), mRNA Length = 3154 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 38 cagctacaactacagctatgat 59 |||||||||||||||||||||| Sbjct: 1631 cagctacaactacagctatgat 1652
>ref|NM_193607.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2148 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 298 gtgctgttcaagtgacaaaagatgg 322 |||||| |||||||||||||||||| Sbjct: 455 gtgctggtcaagtgacaaaagatgg 479
>gb|AC167221.9| Mus musculus 10 BAC RP23-3P24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 204841 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 371 cgcatcctcacaattttcttc 391 ||||||||||||||||||||| Sbjct: 78974 cgcatcctcacaattttcttc 78954
>gb|AC166082.11| Mus musculus 10 BAC RP23-150M2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 170819 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 371 cgcatcctcacaattttcttc 391 ||||||||||||||||||||| Sbjct: 91632 cgcatcctcacaattttcttc 91612
>gb|AC099948.9| Mus musculus chromosome 10, clone RP23-19D21, complete sequence Length = 203086 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 371 cgcatcctcacaattttcttc 391 ||||||||||||||||||||| Sbjct: 201024 cgcatcctcacaattttcttc 201004
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome Length = 3059876 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 aataccttcgcttcatcgata 90 ||||||||||||||||||||| Sbjct: 731392 aataccttcgcttcatcgata 731372
>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome Length = 3544738 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 cttcgcttcatcgataatggc 95 ||||||||||||||||||||| Sbjct: 2253333 cttcgcttcatcgataatggc 2253313
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 298 gtgctgttcaagtgacaaaagatgg 322 |||||| |||||||||||||||||| Sbjct: 22080771 gtgctggtcaagtgacaaaagatgg 22080795
>dbj|AP003413.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1151A10 Length = 124344 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 298 gtgctgttcaagtgacaaaagatgg 322 |||||| |||||||||||||||||| Sbjct: 92284 gtgctggtcaagtgacaaaagatgg 92308
>dbj|AK120948.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038C10, full insert sequence Length = 2894 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 298 gtgctgttcaagtgacaaaagatgg 322 |||||| |||||||||||||||||| Sbjct: 700 gtgctggtcaagtgacaaaagatgg 724
>gb|AC154737.3| Mus musculus BAC clone RP24-390A6 from chromosome 9, complete sequence Length = 113204 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 acctcacttgggaggatatt 464 |||||||||||||||||||| Sbjct: 14103 acctcacttgggaggatatt 14084
>emb|CR847802.11| Zebrafish DNA sequence from clone DKEY-48N1 in linkage group 18, complete sequence Length = 172545 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 cagctacaactacagctatg 57 |||||||||||||||||||| Sbjct: 150456 cagctacaactacagctatg 150475
>gb|AC163108.5| Mus musculus BAC clone RP23-46L17 from chromosome 6, complete sequence Length = 234330 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 tttatgctgctgattttgcc 23 |||||||||||||||||||| Sbjct: 110962 tttatgctgctgattttgcc 110981
>emb|CR937673.1| Single read from an extremity of a cDNA clone made from Aedes aegypti total adult females. 5-prime end of clone KW0AAB1YI22AAM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 402 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aaatttatgctgctgatttt 20 |||||||||||||||||||| Sbjct: 174 aaatttatgctgctgatttt 155
>emb|CR626922.13| Zebrafish DNA sequence from clone DKEY-33K14 in linkage group 18, complete sequence Length = 122627 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cagctacaactacagctatg 57 |||||||||||||||||||| Sbjct: 45477 cagctacaactacagctatg 45458
>gb|AC023170.10| Homo sapiens chromosome 10 clone RP11-373P23, complete sequence Length = 195448 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 acaaaagatggcataccaat 331 |||||||||||||||||||| Sbjct: 64980 acaaaagatggcataccaat 64961
>gb|AC100767.2| Homo sapiens chromosome 11, clone RP11-787P24, complete sequence Length = 170435 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 413 cattaaggctgttgctggagtcta 436 |||||||||||||||||| ||||| Sbjct: 153583 cattaaggctgttgctggtgtcta 153606
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ttcatcgataatggcgcctt 100 |||||||||||||||||||| Sbjct: 963351 ttcatcgataatggcgcctt 963370
>gb|AE000657.1| Aquifex aeolicus VF5, complete genome Length = 1551335 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 agttgctgatggtgcagatg 288 |||||||||||||||||||| Sbjct: 759931 agttgctgatggtgcagatg 759912 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,116,652 Number of Sequences: 3902068 Number of extensions: 4116652 Number of successful extensions: 69234 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 45 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 68900 Number of HSP's gapped (non-prelim): 310 length of query: 521 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 498 effective length of database: 17,143,297,704 effective search space: 8537362256592 effective search space used: 8537362256592 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
