ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags31l10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_479931.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1236 Score = 210 bits (106), Expect = 3e-51 Identities = 222/257 (86%), Gaps = 3/257 (1%) Strand = Plus / Plus Query: 9 caatgtctatgnacagtgggtcagtcttcagccccgngtt-cttgacctcactggaggaa 67 ||||||||||| |||||||||||||||||||||| | | | ||||||||||||| |||| Sbjct: 708 caatgtctatg-acagtgggtcagtcttcagccctgaggtgcttgacctcactg-aggat 765 Query: 68 gatctgatggacaagtttgcttctggtgtttccatggttgcctcactgtccctggcgatc 127 || |||||||| |||||||||||||||||||| |||||||||||| | |||||||| ||| Sbjct: 766 gacctgatggagaagtttgcttctggtgtttctatggttgcctcagtctccctggcaatc 825 Query: 128 tcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatgttctt 187 || ||||| || || ||||||||||| |||||||||||||||| ||||||||||| ||| Sbjct: 826 tcgtacccaactattgctgctgcaccacacatgttcctcaatgggtacaagaatgtgctt 885 Query: 188 gcggtcgctttggagacagactactcgtatgaccatgctgataagatcaaggagtacctc 247 || || ||| ||||||| || |||||||| ||||||||||||||||||||||| | Sbjct: 886 gctgttgctgtggagaccgaatactcgtacccacatgctgataagatcaaggagtatttg 945 Query: 248 aaggacccgagcaagtt 264 || ||||| |||||||| Sbjct: 946 aaagaccccagcaagtt 962 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 318 ccaaggaggaggagaagaaggaagaacccgaggaggaatcagatgg 363 |||||||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 1016 ccaaggaggaagagaagaaggaagagcccgaggaggagtccgatgg 1061
>dbj|D21130.1|RICYK704 Oryza sativa (japonica cultivar-group) YK704 mRNA for acidic ribosomal protein P0, complete cds Length = 1220 Score = 210 bits (106), Expect = 3e-51 Identities = 222/257 (86%), Gaps = 3/257 (1%) Strand = Plus / Plus Query: 9 caatgtctatgnacagtgggtcagtcttcagccccgngtt-cttgacctcactggaggaa 67 ||||||||||| |||||||||||||||||||||| | | | ||||||||||||| |||| Sbjct: 690 caatgtctatg-acagtgggtcagtcttcagccctgaggtgcttgacctcactg-aggat 747 Query: 68 gatctgatggacaagtttgcttctggtgtttccatggttgcctcactgtccctggcgatc 127 || |||||||| |||||||||||||||||||| |||||||||||| | |||||||| ||| Sbjct: 748 gacctgatggagaagtttgcttctggtgtttctatggttgcctcagtctccctggcaatc 807 Query: 128 tcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatgttctt 187 || ||||| || || ||||||||||| |||||||||||||||| ||||||||||| ||| Sbjct: 808 tcgtacccaactattgctgctgcaccacacatgttcctcaatgggtacaagaatgtgctt 867 Query: 188 gcggtcgctttggagacagactactcgtatgaccatgctgataagatcaaggagtacctc 247 || || ||| ||||||| || |||||||| ||||||||||||||||||||||| | Sbjct: 868 gctgttgctgtggagaccgaatactcgtacccacatgctgataagatcaaggagtatttg 927 Query: 248 aaggacccgagcaagtt 264 || ||||| |||||||| Sbjct: 928 aaagaccccagcaagtt 944 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 318 ccaaggaggaggagaagaaggaagaacccgaggaggaatcagatgg 363 |||||||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 998 ccaaggaggaagagaagaaggaagagcccgaggaggagtccgatgg 1043
>dbj|AK064857.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000H12, full insert sequence Length = 1236 Score = 210 bits (106), Expect = 3e-51 Identities = 222/257 (86%), Gaps = 3/257 (1%) Strand = Plus / Plus Query: 9 caatgtctatgnacagtgggtcagtcttcagccccgngtt-cttgacctcactggaggaa 67 ||||||||||| |||||||||||||||||||||| | | | ||||||||||||| |||| Sbjct: 708 caatgtctatg-acagtgggtcagtcttcagccctgaggtgcttgacctcactg-aggat 765 Query: 68 gatctgatggacaagtttgcttctggtgtttccatggttgcctcactgtccctggcgatc 127 || |||||||| |||||||||||||||||||| |||||||||||| | |||||||| ||| Sbjct: 766 gacctgatggagaagtttgcttctggtgtttctatggttgcctcagtctccctggcaatc 825 Query: 128 tcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatgttctt 187 || ||||| || || ||||||||||| |||||||||||||||| ||||||||||| ||| Sbjct: 826 tcgtacccaactattgctgctgcaccacacatgttcctcaatgggtacaagaatgtgctt 885 Query: 188 gcggtcgctttggagacagactactcgtatgaccatgctgataagatcaaggagtacctc 247 || || ||| ||||||| || |||||||| ||||||||||||||||||||||| | Sbjct: 886 gctgttgctgtggagaccgaatactcgtacccacatgctgataagatcaaggagtatttg 945 Query: 248 aaggacccgagcaagtt 264 || ||||| |||||||| Sbjct: 946 aaagaccccagcaagtt 962 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 318 ccaaggaggaggagaagaaggaagaacccgaggaggaatcagatgg 363 |||||||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 1016 ccaaggaggaagagaagaaggaagagcccgaggaggagtccgatgg 1061
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 208 bits (105), Expect = 1e-50 Identities = 206/236 (87%), Gaps = 3/236 (1%) Strand = Plus / Minus Query: 9 caatgtctatgnacagtgggtcagtcttcagccccgngtt-cttgacctcactggaggaa 67 ||||||||||| |||||||||||||||||||||| | | | ||||||||||||| |||| Sbjct: 1715035 caatgtctatg-acagtgggtcagtcttcagccctgaggtgcttgacctcactg-aggat 1714978 Query: 68 gatctgatggacaagtttgcttctggtgtttccatggttgcctcactgtccctggcgatc 127 || |||||||| |||||||||||||||||||| |||||||||||| | |||||||| ||| Sbjct: 1714977 gacctgatggagaagtttgcttctggtgtttctatggttgcctcagtctccctggcaatc 1714918 Query: 128 tcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatgttctt 187 || ||||| || || ||||||||||| |||||||||||||||| ||||||||||| ||| Sbjct: 1714917 tcgtacccaactattgctgctgcaccacacatgttcctcaatgggtacaagaatgtgctt 1714858 Query: 188 gcggtcgctttggagacagactactcgtatgaccatgctgataagatcaaggagta 243 || || ||| ||||||| || |||||||| ||||||||||||||||||||||| Sbjct: 1714857 gctgttgctgtggagaccgaatactcgtacccacatgctgataagatcaaggagta 1714802 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 318 ccaaggaggaggagaagaaggaagaacccgaggaggaatcagatgg 363 |||||||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 1714297 ccaaggaggaagagaagaaggaagagcccgaggaggagtccgatgg 1714252
>dbj|AP004591.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0582D05 Length = 150483 Score = 208 bits (105), Expect = 1e-50 Identities = 206/236 (87%), Gaps = 3/236 (1%) Strand = Plus / Minus Query: 9 caatgtctatgnacagtgggtcagtcttcagccccgngtt-cttgacctcactggaggaa 67 ||||||||||| |||||||||||||||||||||| | | | ||||||||||||| |||| Sbjct: 114535 caatgtctatg-acagtgggtcagtcttcagccctgaggtgcttgacctcactg-aggat 114478 Query: 68 gatctgatggacaagtttgcttctggtgtttccatggttgcctcactgtccctggcgatc 127 || |||||||| |||||||||||||||||||| |||||||||||| | |||||||| ||| Sbjct: 114477 gacctgatggagaagtttgcttctggtgtttctatggttgcctcagtctccctggcaatc 114418 Query: 128 tcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatgttctt 187 || ||||| || || ||||||||||| |||||||||||||||| ||||||||||| ||| Sbjct: 114417 tcgtacccaactattgctgctgcaccacacatgttcctcaatgggtacaagaatgtgctt 114358 Query: 188 gcggtcgctttggagacagactactcgtatgaccatgctgataagatcaaggagta 243 || || ||| ||||||| || |||||||| ||||||||||||||||||||||| Sbjct: 114357 gctgttgctgtggagaccgaatactcgtacccacatgctgataagatcaaggagta 114302 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 318 ccaaggaggaggagaagaaggaagaacccgaggaggaatcagatgg 363 |||||||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 113797 ccaaggaggaagagaagaaggaagagcccgaggaggagtccgatgg 113752
>gb|AC123528.2| Oryza sativa chromosome 11 clone OSJNBa0078E03, complete sequence Length = 149493 Score = 176 bits (89), Expect = 4e-41 Identities = 192/224 (85%), Gaps = 2/224 (0%) Strand = Plus / Minus Query: 21 acagtgggtcagtcttcagccccgngtt-cttgacctcactggaggaagatctgatggac 79 |||||||||||||||||||||| | | | || |||||||||| || | || |||||||| Sbjct: 4402 acagtgggtcagtcttcagccctgaggtgctcgacctcactgaag-aggacctgatggag 4344 Query: 80 aagtttgcttctggtgtttccatggttgcctcactgtccctggcgatctcataccccacc 139 |||||||| ||||||||||| |||||||||||| |||||||||| ||||||||||| || Sbjct: 4343 aagtttgcatctggtgtttcgatggttgcctcagtgtccctggcaatctcatacccaact 4284 Query: 140 atggctgctgcaccgcacatgttcctcaatgcatacaagaatgttcttgcggtcgctttg 199 || |||||||| || |||||||||||||||| ||||||||||| ||||| || ||| || Sbjct: 4283 attgctgctgcgccacacatgttcctcaatgggtacaagaatgtgcttgctgttgctgtg 4224 Query: 200 gagacagactactcgtatgaccatgctgataagatcaaggagta 243 ||||| || ||||| || ||||||||||||||||||||||| Sbjct: 4223 gagaccgaatactcatacccacatgctgataagatcaaggagta 4180 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 318 ccaaggaggaggagaagaaggaagaacccgaggagga 354 |||||||||| |||||||||||||| ||||||||||| Sbjct: 3709 ccaaggaggaagagaagaaggaagagcccgaggagga 3673
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 176 bits (89), Expect = 4e-41 Identities = 192/224 (85%), Gaps = 2/224 (0%) Strand = Plus / Minus Query: 21 acagtgggtcagtcttcagccccgngtt-cttgacctcactggaggaagatctgatggac 79 |||||||||||||||||||||| | | | || |||||||||| || | || |||||||| Sbjct: 1648688 acagtgggtcagtcttcagccctgaggtgctcgacctcactgaag-aggacctgatggag 1648630 Query: 80 aagtttgcttctggtgtttccatggttgcctcactgtccctggcgatctcataccccacc 139 |||||||| ||||||||||| |||||||||||| |||||||||| ||||||||||| || Sbjct: 1648629 aagtttgcatctggtgtttcgatggttgcctcagtgtccctggcaatctcatacccaact 1648570 Query: 140 atggctgctgcaccgcacatgttcctcaatgcatacaagaatgttcttgcggtcgctttg 199 || |||||||| || |||||||||||||||| ||||||||||| ||||| || ||| || Sbjct: 1648569 attgctgctgcgccacacatgttcctcaatgggtacaagaatgtgcttgctgttgctgtg 1648510 Query: 200 gagacagactactcgtatgaccatgctgataagatcaaggagta 243 ||||| || ||||| || ||||||||||||||||||||||| Sbjct: 1648509 gagaccgaatactcatacccacatgctgataagatcaaggagta 1648466 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 318 ccaaggaggaggagaagaaggaagaacccgaggagga 354 |||||||||| |||||||||||||| ||||||||||| Sbjct: 1647995 ccaaggaggaagagaagaaggaagagcccgaggagga 1647959 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 tcaaggagtacctcaaggac 253 |||||||||||||||||||| Sbjct: 26815193 tcaaggagtacctcaaggac 26815212
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 176 bits (89), Expect = 4e-41 Identities = 192/224 (85%), Gaps = 2/224 (0%) Strand = Plus / Minus Query: 21 acagtgggtcagtcttcagccccgngtt-cttgacctcactggaggaagatctgatggac 79 |||||||||||||||||||||| | | | || |||||||||| || | || |||||||| Sbjct: 1646409 acagtgggtcagtcttcagccctgaggtgctcgacctcactgaag-aggacctgatggag 1646351 Query: 80 aagtttgcttctggtgtttccatggttgcctcactgtccctggcgatctcataccccacc 139 |||||||| ||||||||||| |||||||||||| |||||||||| ||||||||||| || Sbjct: 1646350 aagtttgcatctggtgtttcgatggttgcctcagtgtccctggcaatctcatacccaact 1646291 Query: 140 atggctgctgcaccgcacatgttcctcaatgcatacaagaatgttcttgcggtcgctttg 199 || |||||||| || |||||||||||||||| ||||||||||| ||||| || ||| || Sbjct: 1646290 attgctgctgcgccacacatgttcctcaatgggtacaagaatgtgcttgctgttgctgtg 1646231 Query: 200 gagacagactactcgtatgaccatgctgataagatcaaggagta 243 ||||| || ||||| || ||||||||||||||||||||||| Sbjct: 1646230 gagaccgaatactcatacccacatgctgataagatcaaggagta 1646187 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 318 ccaaggaggaggagaagaaggaagaacccgaggagga 354 |||||||||| |||||||||||||| ||||||||||| Sbjct: 1645716 ccaaggaggaagagaagaaggaagagcccgaggagga 1645680 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 tcaaggagtacctcaaggac 253 |||||||||||||||||||| Sbjct: 27142425 tcaaggagtacctcaaggac 27142444
>emb|Y07959.1|ZMRPP0 Z.mays mRNA for acidic ribosomal protein P0 Length = 1253 Score = 165 bits (83), Expect = 1e-37 Identities = 173/203 (85%) Strand = Plus / Plus Query: 62 gaggaagatctgatggacaagtttgcttctggtgtttccatggttgcctcactgtccctg 121 ||||| || ||||| || |||||||| ||||||| |||||||||||||| ||||| ||| Sbjct: 763 gaggaggacctgattgagaagtttgccactggtgtctccatggttgcctccctgtcactg 822 Query: 122 gcgatctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaat 181 |||||||| ||||| ||| | ||||||| || ||||||||| |||||| ||||||||| Sbjct: 823 gcgatctcgtacccgacccttgctgctgtgccccacatgttcatcaatgggtacaagaat 882 Query: 182 gttcttgcggtcgctttggagacagactactcgtatgaccatgctgataagatcaaggag 241 || ||||| || ||| | ||||||||||||||||| |||||||| |||||||||||| Sbjct: 883 gtgcttgctgttgctgtcgagacagactactcgtacccacatgctgacaagatcaaggag 942 Query: 242 tacctcaaggacccgagcaagtt 264 |||||||||||||| |||||||| Sbjct: 943 tacctcaaggacccaagcaagtt 965
>gb|BT016531.1| Zea mays clone Contig364 mRNA sequence Length = 1230 Score = 157 bits (79), Expect = 3e-35 Identities = 172/203 (84%) Strand = Plus / Plus Query: 62 gaggaagatctgatggacaagtttgcttctggtgtttccatggttgcctcactgtccctg 121 ||||| || ||||| || |||||||| ||||||| |||||||||||||| ||||| ||| Sbjct: 744 gaggaggacctgattgagaagtttgccactggtgtctccatggttgcctccctgtcactg 803 Query: 122 gcgatctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaat 181 |||||||| ||||| ||| | ||||||| || ||||||||| |||||| ||||||||| Sbjct: 804 gcgatctcgtacccgacccttgctgctgtgccccacatgttcatcaatgggtacaagaat 863 Query: 182 gttcttgcggtcgctttggagacagactactcgtatgaccatgctgataagatcaaggag 241 || ||||| || ||| | |||||||||||||| || |||||||| |||||||||||| Sbjct: 864 gtgcttgctgttgctgtcgagacagactactcatacccacatgctgacaagatcaaggag 923 Query: 242 tacctcaaggacccgagcaagtt 264 |||||||||||||| |||||||| Sbjct: 924 tacctcaaggacccaagcaagtt 946
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 153 bits (77), Expect = 5e-34 Identities = 189/224 (84%), Gaps = 2/224 (0%) Strand = Plus / Minus Query: 21 acagtgggtcagtcttcagccccgngtt-cttgacctcactggaggaagatctgatggac 79 |||||||||||||||||||||| | | | || |||||||||| || | || |||||||| Sbjct: 1601899 acagtgggtcagtcttcagccctgaggtgctcgacctcactgaag-aggacctgatggag 1601841 Query: 80 aagtttgcttctggtgtttccatggttgcctcactgtccctggcgatctcataccccacc 139 |||||||| ||||||||||| |||||||||||| |||||||||| ||||||||||| || Sbjct: 1601840 aagtttgcatctggtgtttcgatggttgcctcagtgtccctggcaatctcatacccaact 1601781 Query: 140 atggctgctgcaccgcacatgttcctcaatgcatacaagaatgttcttgcggtcgctttg 199 || || ||||| || |||||||||||||||| ||||||||||| || || || ||| || Sbjct: 1601780 atcgcagctgcgccacacatgttcctcaatgggtacaagaatgtgctcgctgttgctgtg 1601721 Query: 200 gagacagactactcgtatgaccatgctgataagatcaaggagta 243 ||||| || ||||| || |||||||| |||||||||||||| Sbjct: 1601720 gagaccgaatactcatacccacatgctgacaagatcaaggagta 1601677 Score = 56.0 bits (28), Expect = 9e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 318 ccaaggaggaggagaagaaggaagaacccgaggaggaatc 357 |||||||||| |||||||||||||| |||||||| ||||| Sbjct: 1601202 ccaaggaggaagagaagaaggaagagcccgaggaagaatc 1601163 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 aggaggaggagaagaaggaag 341 ||||||||||||||||||||| Sbjct: 27302645 aggaggaggagaagaaggaag 27302625 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaagga 339 |||||||||||||||||||| Sbjct: 24833308 aaggaggaggagaagaagga 24833327
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 153 bits (77), Expect = 5e-34 Identities = 189/224 (84%), Gaps = 2/224 (0%) Strand = Plus / Minus Query: 21 acagtgggtcagtcttcagccccgngtt-cttgacctcactggaggaagatctgatggac 79 |||||||||||||||||||||| | | | || |||||||||| || | || |||||||| Sbjct: 1601899 acagtgggtcagtcttcagccctgaggtgctcgacctcactgaag-aggacctgatggag 1601841 Query: 80 aagtttgcttctggtgtttccatggttgcctcactgtccctggcgatctcataccccacc 139 |||||||| ||||||||||| |||||||||||| |||||||||| ||||||||||| || Sbjct: 1601840 aagtttgcatctggtgtttcgatggttgcctcagtgtccctggcaatctcatacccaact 1601781 Query: 140 atggctgctgcaccgcacatgttcctcaatgcatacaagaatgttcttgcggtcgctttg 199 || || ||||| || |||||||||||||||| ||||||||||| || || || ||| || Sbjct: 1601780 atcgcagctgcgccacacatgttcctcaatgggtacaagaatgtgctcgctgttgctgtg 1601721 Query: 200 gagacagactactcgtatgaccatgctgataagatcaaggagta 243 ||||| || ||||| || |||||||| |||||||||||||| Sbjct: 1601720 gagaccgaatactcatacccacatgctgacaagatcaaggagta 1601677 Score = 56.0 bits (28), Expect = 9e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 318 ccaaggaggaggagaagaaggaagaacccgaggaggaatc 357 |||||||||| |||||||||||||| |||||||| ||||| Sbjct: 1601202 ccaaggaggaagagaagaaggaagagcccgaggaagaatc 1601163 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 aggaggaggagaagaaggaag 341 ||||||||||||||||||||| Sbjct: 27228245 aggaggaggagaagaaggaag 27228225 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaagga 339 |||||||||||||||||||| Sbjct: 24761514 aaggaggaggagaagaagga 24761533
>emb|BX000508.1|CNS08CDY Oryza sativa chromosome 12, . BAC OJ1575_G05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 91883 Score = 153 bits (77), Expect = 5e-34 Identities = 189/224 (84%), Gaps = 2/224 (0%) Strand = Plus / Plus Query: 21 acagtgggtcagtcttcagccccgngtt-cttgacctcactggaggaagatctgatggac 79 |||||||||||||||||||||| | | | || |||||||||| || | || |||||||| Sbjct: 91023 acagtgggtcagtcttcagccctgaggtgctcgacctcactgaag-aggacctgatggag 91081 Query: 80 aagtttgcttctggtgtttccatggttgcctcactgtccctggcgatctcataccccacc 139 |||||||| ||||||||||| |||||||||||| |||||||||| ||||||||||| || Sbjct: 91082 aagtttgcatctggtgtttcgatggttgcctcagtgtccctggcaatctcatacccaact 91141 Query: 140 atggctgctgcaccgcacatgttcctcaatgcatacaagaatgttcttgcggtcgctttg 199 || || ||||| || |||||||||||||||| ||||||||||| || || || ||| || Sbjct: 91142 atcgcagctgcgccacacatgttcctcaatgggtacaagaatgtgctcgctgttgctgtg 91201 Query: 200 gagacagactactcgtatgaccatgctgataagatcaaggagta 243 ||||| || ||||| || |||||||| |||||||||||||| Sbjct: 91202 gagaccgaatactcatacccacatgctgacaagatcaaggagta 91245 Score = 56.0 bits (28), Expect = 9e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 318 ccaaggaggaggagaagaaggaagaacccgaggaggaatc 357 |||||||||| |||||||||||||| |||||||| ||||| Sbjct: 91720 ccaaggaggaagagaagaaggaagagcccgaggaagaatc 91759
>emb|BX000498.1|CNS08CDO Oryza sativa chromosome 12, . BAC OSJNBa0009F13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183385 Score = 153 bits (77), Expect = 5e-34 Identities = 189/224 (84%), Gaps = 2/224 (0%) Strand = Plus / Plus Query: 21 acagtgggtcagtcttcagccccgngtt-cttgacctcactggaggaagatctgatggac 79 |||||||||||||||||||||| | | | || |||||||||| || | || |||||||| Sbjct: 23833 acagtgggtcagtcttcagccctgaggtgctcgacctcactgaag-aggacctgatggag 23891 Query: 80 aagtttgcttctggtgtttccatggttgcctcactgtccctggcgatctcataccccacc 139 |||||||| ||||||||||| |||||||||||| |||||||||| ||||||||||| || Sbjct: 23892 aagtttgcatctggtgtttcgatggttgcctcagtgtccctggcaatctcatacccaact 23951 Query: 140 atggctgctgcaccgcacatgttcctcaatgcatacaagaatgttcttgcggtcgctttg 199 || || ||||| || |||||||||||||||| ||||||||||| || || || ||| || Sbjct: 23952 atcgcagctgcgccacacatgttcctcaatgggtacaagaatgtgctcgctgttgctgtg 24011 Query: 200 gagacagactactcgtatgaccatgctgataagatcaaggagta 243 ||||| || ||||| || |||||||| |||||||||||||| Sbjct: 24012 gagaccgaatactcatacccacatgctgacaagatcaaggagta 24055 Score = 56.0 bits (28), Expect = 9e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 318 ccaaggaggaggagaagaaggaagaacccgaggaggaatc 357 |||||||||| |||||||||||||| |||||||| ||||| Sbjct: 24530 ccaaggaggaagagaagaaggaagagcccgaggaagaatc 24569
>ref|XM_479932.1| Oryza sativa (japonica cultivar-group), mRNA Length = 451 Score = 141 bits (71), Expect = 2e-30 Identities = 149/175 (85%) Strand = Plus / Plus Query: 90 ctggtgtttccatggttgcctcactgtccctggcgatctcataccccaccatggctgctg 149 |||||||||| |||||||||||| | |||||||| ||||| ||||| || || ||||||| Sbjct: 1 ctggtgtttctatggttgcctcagtctccctggcaatctcgtacccaactattgctgctg 60 Query: 150 caccgcacatgttcctcaatgcatacaagaatgttcttgcggtcgctttggagacagact 209 |||| |||||||||||||||| ||||||||||| ||||| || ||| ||||||| || | Sbjct: 61 caccacacatgttcctcaatgggtacaagaatgtgcttgctgttgctgtggagaccgaat 120 Query: 210 actcgtatgaccatgctgataagatcaaggagtacctcaaggacccgagcaagtt 264 ||||||| ||||||||||||||||||||||| | || ||||| |||||||| Sbjct: 121 actcgtacccacatgctgataagatcaaggagtatttgaaagaccccagcaagtt 175 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 318 ccaaggaggaggagaagaaggaagaacccgaggaggaatcagatgg 363 |||||||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 229 ccaaggaggaagagaagaaggaagagcccgaggaggagtccgatgg 274
>dbj|AK062008.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-E02, full insert sequence Length = 451 Score = 141 bits (71), Expect = 2e-30 Identities = 149/175 (85%) Strand = Plus / Plus Query: 90 ctggtgtttccatggttgcctcactgtccctggcgatctcataccccaccatggctgctg 149 |||||||||| |||||||||||| | |||||||| ||||| ||||| || || ||||||| Sbjct: 1 ctggtgtttctatggttgcctcagtctccctggcaatctcgtacccaactattgctgctg 60 Query: 150 caccgcacatgttcctcaatgcatacaagaatgttcttgcggtcgctttggagacagact 209 |||| |||||||||||||||| ||||||||||| ||||| || ||| ||||||| || | Sbjct: 61 caccacacatgttcctcaatgggtacaagaatgtgcttgctgttgctgtggagaccgaat 120 Query: 210 actcgtatgaccatgctgataagatcaaggagtacctcaaggacccgagcaagtt 264 ||||||| ||||||||||||||||||||||| | || ||||| |||||||| Sbjct: 121 actcgtacccacatgctgataagatcaaggagtatttgaaagaccccagcaagtt 175 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 318 ccaaggaggaggagaagaaggaagaacccgaggaggaatcagatgg 363 |||||||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 229 ccaaggaggaagagaagaaggaagagcccgaggaggagtccgatgg 274
>gb|BT018921.1| Zea mays clone Contig30.F mRNA sequence Length = 820 Score = 93.7 bits (47), Expect = 4e-16 Identities = 143/175 (81%) Strand = Plus / Plus Query: 90 ctggtgtttccatggttgcctcactgtccctggcgatctcataccccaccatggctgctg 149 ||||||| |||||||| || || || |||||||| | || ||||| ||| | ||||||| Sbjct: 292 ctggtgtctccatggtcgcttctctttccctggcattatcgtacccgacccttgctgctg 351 Query: 150 caccgcacatgttcctcaatgcatacaagaatgttcttgcggtcgctttggagacagact 209 || |||||||| |||||| |||||||| || ||||| || ||| ||||||| |||| Sbjct: 352 tgccccacatgtttatcaatgggtacaagaacgtgcttgctgttgctgtggagacggact 411 Query: 210 actcgtatgaccatgctgataagatcaaggagtacctcaaggacccgagcaagtt 264 ||||||| || || || ||||||||||||||||||||||||||||||||||| Sbjct: 412 actcgtacccacacgccgacaagatcaaggagtacctcaaggacccgagcaagtt 466
>dbj|AB236824.1| Trifolium pratense RNA for putative 60S acidic ribosomal protein P0, complete cds, clone: C2319 Length = 1345 Score = 65.9 bits (33), Expect = 9e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 91 tggtgtttccatggttgcctcactgtccctggcgatctcataccccaccatggctgctgc 150 ||||||||| |||||| | ||||| || |||| ||||| ||||| || | || ||||| Sbjct: 816 tggtgtttcaatggttacttcactttcgttggccatctcttacccaacacttgcagctgc 875 Query: 151 accgcacatgttcctcaatgcatacaagaatgttctt 187 ||| ||||||||| ||||||| ||||||||||||||| Sbjct: 876 acctcacatgttcgtcaatgcctacaagaatgttctt 912 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 ccaaggaggaggagaagaag 337 |||||||||||||||||||| Sbjct: 1046 ccaaggaggaggagaagaag 1065
>emb|X15206.1|CRCRE2 C.rubrum mRNA for light-induced 34kD protein Length = 1332 Score = 61.9 bits (31), Expect = 1e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 325 ggaggagaagaaggaagaacccgaggaggaatcagatggcgagatgggattcagtctgtt 384 |||||| |||||||||||||| ||||| |||||||||| || || || |||||||| || Sbjct: 1136 ggaggaaaagaaggaagaacctgaggaagaatcagatgatgacatcggtttcagtctctt 1195 Query: 385 tgacgactaag 395 |||||| |||| Sbjct: 1196 tgacgattaag 1206
>gb|L46848.1|SOYARPP Glycine max acidic ribosomal protein P0 mRNA, complete cds Length = 1247 Score = 60.0 bits (30), Expect = 6e-06 Identities = 90/110 (81%) Strand = Plus / Plus Query: 80 aagtttgcttctggtgtttccatggttgcctcactgtccctggcgatctcataccccacc 139 ||||||||| ||||||| || |||||| | ||||| || |||| || ||||| || || Sbjct: 776 aagtttgctgctggtgtctcaatggttacttcactttcattggctatttcatatccaaca 835 Query: 140 atggctgctgcaccgcacatgttcctcaatgcatacaagaatgttcttgc 189 | ||||| ||||| |||||||| ||||||| ||||||||||||||||| Sbjct: 836 cttgctgcagcaccacacatgtttgtcaatgcctacaagaatgttcttgc 885 Score = 48.1 bits (24), Expect = 0.022 Identities = 27/28 (96%) Strand = Plus / Plus Query: 318 ccaaggaggaggagaagaaggaagaacc 345 ||||||||||||| |||||||||||||| Sbjct: 1017 ccaaggaggaggaaaagaaggaagaacc 1044
>ref|NM_129559.2| Arabidopsis thaliana structural constituent of ribosome AT2G40010 mRNA, complete cds Length = 1153 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 125 atctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatgtt 184 ||||| ||||| ||| | || ||||| || ||||||||||||||||| |||||||| ||| Sbjct: 694 atctcttacccaaccgtagcagctgcgcctcacatgttcctcaatgcttacaagaacgtt 753 Query: 185 cttgc 189 ||||| Sbjct: 754 cttgc 758
>gb|AY070448.1| Arabidopsis thaliana At2g40010 mRNA sequence Length = 1373 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 125 atctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatgtt 184 ||||| ||||| ||| | || ||||| || ||||||||||||||||| |||||||| ||| Sbjct: 898 atctcttacccaaccgtagcagctgcgcctcacatgttcctcaatgcttacaagaacgtt 957 Query: 185 cttgc 189 ||||| Sbjct: 958 cttgc 962
>dbj|AB236811.1| Trifolium pratense RNA for putative 60S acidic ribosomal protein P0, complete cds, clone: C212 Length = 1326 Score = 58.0 bits (29), Expect = 2e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 91 tggtgtttccatggttgcctcactgtccctggcgatctcataccccaccatggctgctgc 150 ||||||||| |||||| | ||||| || |||| ||||| ||||| || | || ||||| Sbjct: 823 tggtgtttcaatggttacttcactttcgttggccatctcttacccaacacttgcagctgc 882 Query: 151 accgcacatgttcctcaatgcatacaagaatgttctt 187 ||| ||||||||| | ||||| ||||||||||||||| Sbjct: 883 acctcacatgttcgtgaatgcctacaagaatgttctt 919 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 ccaaggaggaggagaagaag 337 |||||||||||||||||||| Sbjct: 1053 ccaaggaggaggagaagaag 1072
>gb|AF002109.3| Arabidopsis thaliana chromosome 2 clone T28M21 map CIC10A06, complete sequence Length = 108847 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 125 atctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatgtt 184 ||||| ||||| ||| | || ||||| || ||||||||||||||||| |||||||| ||| Sbjct: 77581 atctcttacccaaccgtagcagctgcgcctcacatgttcctcaatgcttacaagaacgtt 77522 Query: 185 cttgc 189 ||||| Sbjct: 77521 cttgc 77517
>emb|BX816288.1|CNS0AE9F Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH39ZH02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1296 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 125 atctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatgtt 184 ||||| ||||| ||| | || ||||| || ||||||||||||||||| |||||||| ||| Sbjct: 780 atctcttacccaaccgtagcagctgcgcctcacatgttcctcaatgcttacaagaacgtt 721 Query: 185 cttgc 189 ||||| Sbjct: 720 cttgc 716
>gb|BT001919.1| Arabidopsis thaliana clone C105444 putative 60S acidic ribosomal protein P0 (At2g40010) mRNA, complete cds Length = 985 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 125 atctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatgtt 184 ||||| ||||| ||| | || ||||| || ||||||||||||||||| |||||||| ||| Sbjct: 694 atctcttacccaaccgtagcagctgcgcctcacatgttcctcaatgcttacaagaacgtt 753 Query: 185 cttgc 189 ||||| Sbjct: 754 cttgc 758
>ref|NM_111754.2| Arabidopsis thaliana structural constituent of ribosome AT3G09200 mRNA, complete cds Length = 1307 Score = 56.0 bits (28), Expect = 9e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 143 gctgctgcaccgcacatgttcctcaatgcatacaagaatg 182 |||||||||||||| |||||| ||||||| |||||||||| Sbjct: 779 gctgctgcaccgcatatgttcatcaatgcgtacaagaatg 818
>gb|AC011436.7|ATAC011436 Arabidopsis thaliana chromosome III BAC F3L24 genomic sequence, complete sequence Length = 106688 Score = 56.0 bits (28), Expect = 9e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 143 gctgctgcaccgcacatgttcctcaatgcatacaagaatg 182 |||||||||||||| |||||| ||||||| |||||||||| Sbjct: 20291 gctgctgcaccgcatatgttcatcaatgcgtacaagaatg 20252
>gb|AC009326.8|ATAC009326 Arabidopsis thaliana chromosome III P1 MZB10 genomic sequence, complete sequence Length = 85561 Score = 56.0 bits (28), Expect = 9e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 143 gctgctgcaccgcacatgttcctcaatgcatacaagaatg 182 |||||||||||||| |||||| ||||||| |||||||||| Sbjct: 84614 gctgctgcaccgcatatgttcatcaatgcgtacaagaatg 84575
>gb|AY059117.1| Arabidopsis thaliana putative 60S acidic ribosomal protein P0 (At3g09200) mRNA, complete cds Length = 994 Score = 56.0 bits (28), Expect = 9e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 143 gctgctgcaccgcacatgttcctcaatgcatacaagaatg 182 |||||||||||||| |||||| ||||||| |||||||||| Sbjct: 709 gctgctgcaccgcatatgttcatcaatgcgtacaagaatg 748
>gb|AF370225.1| Arabidopsis thaliana putative 60S acidic ribosomal protein P0 (At3g09200) mRNA, complete cds Length = 1160 Score = 56.0 bits (28), Expect = 9e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 143 gctgctgcaccgcacatgttcctcaatgcatacaagaatg 182 |||||||||||||| |||||| ||||||| |||||||||| Sbjct: 779 gctgctgcaccgcatatgttcatcaatgcgtacaagaatg 818
>emb|BX824039.1|CNS0A6RI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH17ZF06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1185 Score = 56.0 bits (28), Expect = 9e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 143 gctgctgcaccgcacatgttcctcaatgcatacaagaatg 182 |||||||||||||| |||||| ||||||| |||||||||| Sbjct: 763 gctgctgcaccgcatatgttcatcaatgcgtacaagaatg 802
>emb|BX823923.1|CNS0A6KD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS92ZG11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1136 Score = 56.0 bits (28), Expect = 9e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 143 gctgctgcaccgcacatgttcctcaatgcatacaagaatg 182 |||||||||||||| |||||| ||||||| |||||||||| Sbjct: 746 gctgctgcaccgcatatgttcatcaatgcgtacaagaatg 785
>gb|AY086582.1| Arabidopsis thaliana clone 2595 mRNA, complete sequence Length = 1199 Score = 56.0 bits (28), Expect = 9e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 143 gctgctgcaccgcacatgttcctcaatgcatacaagaatg 182 |||||||||||||| |||||| ||||||| |||||||||| Sbjct: 777 gctgctgcaccgcatatgttcatcaatgcgtacaagaatg 816
>gb|BT016538.1| Zea mays clone Contig371 mRNA sequence Length = 707 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 326 gaggagaagaaggaagaacccgaggaggaatcagatggcgagatgggattcagtctgtt 384 ||||||||||||||||| ||| ||||||| || |||| ||| ||||| ||||| ||||| Sbjct: 356 gaggagaagaaggaagagcccaaggaggagtctgatgacgacatgggcttcagcctgtt 414
>gb|DQ235177.1| Solanum tuberosum clone 157H11 acidic ribosomal protein P1a-like mRNA, complete cds Length = 567 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Plus Query: 326 gaggagaagaaggaagaacccgaggaggaatcagatggcgagatgggattcagtctgttt 385 ||||| ||||||||||| ||| |||| ||| |||| ||| |||||||||||||||||| Sbjct: 332 gaggaaaagaaggaagagcccaaggaagaaagtgatgacgatatgggattcagtctgttt 391 Query: 386 ga 387 || Sbjct: 392 ga 393
>emb|BX819391.1|CNS0A9W8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB74ZC11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 961 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 156 acatgttcctcaatgcatacaagaatgttcttgc 189 |||||||||||||||| |||||||| |||||||| Sbjct: 581 acatgttcctcaatgcttacaagaacgttcttgc 614
>ref|NM_111960.2| Arabidopsis thaliana structural constituent of ribosome AT3G11250 mRNA, complete cds Length = 1239 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 146 gctgcaccgcacatgttcctcaatgcatacaagaatg 182 ||||||||||| |||||| ||||||| |||||||||| Sbjct: 805 gctgcaccgcatatgttcatcaatgcctacaagaatg 841
>gb|AY091201.1| Arabidopsis thaliana putative 60S acidic ribosomal protein (At3g11250) mRNA, complete cds Length = 1003 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 146 gctgcaccgcacatgttcctcaatgcatacaagaatg 182 ||||||||||| |||||| ||||||| |||||||||| Sbjct: 712 gctgcaccgcatatgttcatcaatgcctacaagaatg 748
>gb|AY056150.1| Arabidopsis thaliana putative 60S acidic ribosomal protein (At3g11250) mRNA, complete cds Length = 1174 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 146 gctgcaccgcacatgttcctcaatgcatacaagaatg 182 ||||||||||| |||||| ||||||| |||||||||| Sbjct: 775 gctgcaccgcatatgttcatcaatgcctacaagaatg 811
>gb|AC073395.6|AC073395 Arabidopsis thaliana chromosome 3 BAC F11B9 genomic sequence, complete sequence Length = 103517 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 146 gctgcaccgcacatgttcctcaatgcatacaagaatg 182 ||||||||||| |||||| ||||||| |||||||||| Sbjct: 59633 gctgcaccgcatatgttcatcaatgcctacaagaatg 59669
>gb|AY087728.1| Arabidopsis thaliana clone 38036 mRNA, complete sequence Length = 1185 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 146 gctgcaccgcacatgttcctcaatgcatacaagaatg 182 ||||||||||| |||||| ||||||| |||||||||| Sbjct: 752 gctgcaccgcatatgttcatcaatgcctacaagaatg 788
>gb|AC135667.5| Mus musculus BAC clone RP24-536G18 from chromosome 13, complete sequence Length = 166185 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaagaa 343 |||||||||||||||||||||||| Sbjct: 82808 aaggaggaggagaagaaggaagaa 82831
>gb|DQ235176.1| Solanum tuberosum clone 156H10 P0 ribosomal protein-like mRNA, complete cds Length = 1254 Score = 48.1 bits (24), Expect = 0.022 Identities = 57/68 (83%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaagaacccgaggaggaatcagatggcgagatgggattcagt 379 ||||||||||||||||||||||| || | |||| ||||||| || ||||| |||||| Sbjct: 1055 aaggaggaggagaagaaggaagagcctgctgaggtctcagatgatgacatgggtttcagt 1114 Query: 380 ctgtttga 387 ||||||| Sbjct: 1115 ttgtttga 1122 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 143 gctgctgcaccgcacatgttcctcaatgcatacaagaatgt 183 ||||||||||| ||||||||| ||| || ||||||||||| Sbjct: 875 gctgctgcaccacacatgttcaccaacgcctacaagaatgt 915
>gb|AC122117.10| Mus musculus chromosome 18, clone RP23-61O22, complete sequence Length = 207024 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaagaa 343 |||||||||||||||||||||||| Sbjct: 120163 aaggaggaggagaagaaggaagaa 120186 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaagga 339 |||||||||||||||||||| Sbjct: 119837 aaggaggaggagaagaagga 119856
>gb|AC164402.3| Mus musculus chromosome 15, clone RP23-463G20, complete sequence Length = 196916 Score = 48.1 bits (24), Expect = 0.022 Identities = 27/28 (96%) Strand = Plus / Minus Query: 74 atggacaagtttgcttctggtgtttcca 101 ||||||||| |||||||||||||||||| Sbjct: 96023 atggacaagcttgcttctggtgtttcca 95996
>gb|BC042186.1| Homo sapiens cDNA clone IMAGE:5393404, partial cds Length = 814 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaagaa 343 |||||||||||||||||||||||| Sbjct: 670 aaggaggaggagaagaaggaagaa 693 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaagaa 343 |||||||||||||||||||||||| Sbjct: 502 aaggaggaggagaagaaggaagaa 525
>emb|Z84486.1|HS528L19 Human DNA sequence from clone RP3-528L19 on chromosome 6q23 Contains part of the SGK gene for serum/glucocorticoid regulated kinase, complete sequence Length = 87013 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaagaa 343 |||||||||||||||||||||||| Sbjct: 9990 aaggaggaggagaagaaggaagaa 10013
>ref|XM_795562.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC591398 (LOC591398), mRNA Length = 2148 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaagaa 343 |||||||||||||||||||||||| Sbjct: 730 aaggaggaggagaagaaggaagaa 753
>gb|AC010009.7| Drosophila melanogaster 3L BAC RP98-23D16 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 195757 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Minus Query: 233 atcaaggagtacctcaaggacccgagcaagtt 264 |||||||||||| |||||||||| |||||||| Sbjct: 186098 atcaaggagtacatcaaggaccccagcaagtt 186067
>gb|AC010011.5| Drosophila melanogaster 3L BAC RP98-17D14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167026 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Plus Query: 233 atcaaggagtacctcaaggacccgagcaagtt 264 |||||||||||| |||||||||| |||||||| Sbjct: 140084 atcaaggagtacatcaaggaccccagcaagtt 140115
>dbj|AK021773.1| Homo sapiens cDNA FLJ11711 fis, clone HEMBA1005152 Length = 1839 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaagaa 343 |||||||||||||||||||||||| Sbjct: 1269 aaggaggaggagaagaaggaagaa 1292
>gb|AC069368.14| Homo sapiens chromosome 15, clone CTD-2017F17, complete sequence Length = 132080 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaagaa 343 |||||||||||||||||||||||| Sbjct: 15493 aaggaggaggagaagaaggaagaa 15516
>ref|NM_079487.2| Drosophila melanogaster Ribosomal protein LP0 CG7490-RA (RpLP0), mRNA Length = 1262 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Plus Query: 233 atcaaggagtacctcaaggacccgagcaagtt 264 |||||||||||| |||||||||| |||||||| Sbjct: 928 atcaaggagtacatcaaggaccccagcaagtt 959
>gb|AY075528.1| Drosophila melanogaster RE74511 full length cDNA Length = 1277 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Plus Query: 233 atcaaggagtacctcaaggacccgagcaagtt 264 |||||||||||| |||||||||| |||||||| Sbjct: 928 atcaaggagtacatcaaggaccccagcaagtt 959
>gb|AC019084.9| Homo sapiens BAC clone RP11-354O2 from 7, complete sequence Length = 201215 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Minus Query: 320 aaggaggaggagaagaaggaagaa 343 |||||||||||||||||||||||| Sbjct: 84945 aaggaggaggagaagaaggaagaa 84922 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 321 aggaggaggagaagaaggaagaa 343 ||||||||||||||||||||||| Sbjct: 85194 aggaggaggagaagaaggaagaa 85172 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 321 aggaggaggagaagaaggaagaa 343 ||||||||||||||||||||||| Sbjct: 84792 aggaggaggagaagaaggaagaa 84770 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 323 gaggaggagaagaaggaagaa 343 ||||||||||||||||||||| Sbjct: 85118 gaggaggagaagaaggaagaa 85098 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 323 gaggaggagaagaaggaagaa 343 ||||||||||||||||||||| Sbjct: 85081 gaggaggagaagaaggaagaa 85061 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 323 gaggaggagaagaaggaagaa 343 ||||||||||||||||||||| Sbjct: 84657 gaggaggagaagaaggaagaa 84637 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 320 aaggaggaggagaagaaggaagaa 343 |||||||||||| ||||||||||| Sbjct: 85173 aaggaggaggaggagaaggaagaa 85150 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 320 aaggaggaggagaagaaggaagaa 343 |||||||||||| ||||||||||| Sbjct: 84712 aaggaggaggaggagaaggaagaa 84689 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aggaggaggagaagaaggaa 340 |||||||||||||||||||| Sbjct: 84628 aggaggaggagaagaaggaa 84609
>gb|AC153881.4| Mus musculus 10 BAC RP23-257B9 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208992 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaagaa 343 |||||||||||||||||||||||| Sbjct: 90348 aaggaggaggagaagaaggaagaa 90371 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaaga 342 ||||||||||||||||||||||| Sbjct: 91146 aaggaggaggagaagaaggaaga 91168 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaaga 342 ||||||||||||||||||||||| Sbjct: 91097 aaggaggaggagaagaaggaaga 91119
>dbj|AB178287.1| Neospora caninum NcRP1 mRNA for ribosomal protein P1, complete cds Length = 555 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Plus Query: 324 aggaggagaagaaggaagaacccgaggaggaa 355 ||||||||||||||||||| || ||||||||| Sbjct: 313 aggaggagaagaaggaagagcctgaggaggaa 344
>gb|BT021447.1| Drosophila melanogaster GH01513 full insert cDNA Length = 1674 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Plus Query: 233 atcaaggagtacctcaaggacccgagcaagtt 264 |||||||||||| |||||||||| |||||||| Sbjct: 1314 atcaaggagtacatcaaggaccccagcaagtt 1345
>gb|AE003596.5| Drosophila melanogaster chromosome 3L, section 77 of 83 of the complete sequence Length = 249021 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Plus Query: 233 atcaaggagtacctcaaggacccgagcaagtt 264 |||||||||||| |||||||||| |||||||| Sbjct: 202451 atcaaggagtacatcaaggaccccagcaagtt 202482
>gb|DQ306774.1| Hevea brasiliensis isolate SSH45 mRNA sequence Length = 308 Score = 48.1 bits (24), Expect = 0.022 Identities = 48/56 (85%) Strand = Plus / Plus Query: 128 tcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatgt 183 |||||||| || |||| |||||||| ||||||||| | ||||| ||||||||||| Sbjct: 194 tcatacccaactctggcagctgcaccacacatgttcgttaatgcctacaagaatgt 249
>gb|DQ306752.1| Hevea brasiliensis isolate SSH23 mRNA sequence Length = 308 Score = 48.1 bits (24), Expect = 0.022 Identities = 48/56 (85%) Strand = Plus / Plus Query: 128 tcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatgt 183 |||||||| || |||| |||||||| ||||||||| | ||||| ||||||||||| Sbjct: 194 tcatacccaactctggcagctgcaccacacatgttcgttaatgcctacaagaatgt 249
>emb|AL928893.10| Mouse DNA sequence from clone RP23-55I14 on chromosome 2, complete sequence Length = 235241 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaagaa 343 |||||||||||||||||||||||| Sbjct: 181521 aaggaggaggagaagaaggaagaa 181544
>gb|DQ241840.1| Solanum tuberosum clone 181G12 P0 ribosomal protein-like mRNA, complete cds Length = 1253 Score = 48.1 bits (24), Expect = 0.022 Identities = 57/68 (83%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaagaacccgaggaggaatcagatggcgagatgggattcagt 379 ||||||||||||||||||||||| || | |||| ||||||| || ||||| |||||| Sbjct: 1033 aaggaggaggagaagaaggaagagcctgctgaggtctcagatgatgacatgggtttcagt 1092 Query: 380 ctgtttga 387 ||||||| Sbjct: 1093 ttgtttga 1100 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 143 gctgctgcaccgcacatgttcctcaatgcatacaagaatgt 183 ||||||||||| ||||||||| ||| || ||||||||||| Sbjct: 853 gctgctgcaccacacatgttcaccaacgcctacaagaatgt 893
>gb|AC106843.11| Mus musculus chromosome 15, clone RP24-151M4, complete sequence Length = 179117 Score = 48.1 bits (24), Expect = 0.022 Identities = 27/28 (96%) Strand = Plus / Plus Query: 74 atggacaagtttgcttctggtgtttcca 101 ||||||||| |||||||||||||||||| Sbjct: 142519 atggacaagcttgcttctggtgtttcca 142546
>gb|M25772.1|DROAP3A Drosophila melanogaster DNA repair protein (AP3) mRNA, complete cds Length = 1193 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Plus Query: 233 atcaaggagtacctcaaggacccgagcaagtt 264 |||||||||||| |||||||||| |||||||| Sbjct: 860 atcaaggagtacatcaaggaccccagcaagtt 891
>gb|AC114644.10| Mus musculus chromosome 1, clone RP24-128L10, complete sequence Length = 137391 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 320 aaggaggaggagaagaaggaaga 342 ||||||||||||||||||||||| Sbjct: 11086 aaggaggaggagaagaaggaaga 11064
>gb|AC132899.11| Mus musculus chromosome 15, clone RP24-367P22, complete sequence Length = 152183 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 321 aggaggaggagaagaaggaagaa 343 ||||||||||||||||||||||| Sbjct: 57424 aggaggaggagaagaaggaagaa 57446
>gb|AC118688.10| Mus musculus chromosome 5, clone RP23-302F24, complete sequence Length = 176001 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 321 aggaggaggagaagaaggaagaa 343 ||||||||||||||||||||||| Sbjct: 172939 aggaggaggagaagaaggaagaa 172961
>ref|NM_187845.1| Oryza sativa (japonica cultivar-group), Ozsa8289 predicted mRNA Length = 534 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 317 cccaaggaggaggagaagaagga 339 ||||||||||||||||||||||| Sbjct: 220 cccaaggaggaggagaagaagga 242
>ref|XM_467718.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1727 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 235 caaggagtacctcaaggacccga 257 ||||||||||||||||||||||| Sbjct: 1128 caaggagtacctcaaggacccga 1150
>ref|XM_464973.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1080 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Plus Query: 326 gaggagaagaaggaagaacccgaggag 352 |||||||||||||||||| |||||||| Sbjct: 617 gaggagaagaaggaagaagccgaggag 643
>gb|AC115846.7| Mus musculus chromosome 1, clone RP24-245O4, complete sequence Length = 170731 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 320 aaggaggaggagaagaaggaaga 342 ||||||||||||||||||||||| Sbjct: 142741 aaggaggaggagaagaaggaaga 142719
>gb|BT018010.1| Zea mays clone EL01N0528A08.c mRNA sequence Length = 654 Score = 46.1 bits (23), Expect = 0.088 Identities = 50/59 (84%) Strand = Plus / Plus Query: 326 gaggagaagaaggaagaacccgaggaggaatcagatggcgagatgggattcagtctgtt 384 ||||||||||||||||| || ||||||| || |||| ||| ||||| ||||| ||||| Sbjct: 325 gaggagaagaaggaagaggccaaggaggagtctgatgacgacatgggcttcagcctgtt 383
>gb|AC106169.5| Rattus norvegicus x BAC CH230-105D14 (Children's Hospital Oakland Research Institute) complete sequence Length = 227592 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 321 aggaggaggagaagaaggaagaa 343 ||||||||||||||||||||||| Sbjct: 169328 aggaggaggagaagaaggaagaa 169350
>gb|AY674236.1| Ixodes pacificus clone IP_7_60_92_569_CLU ribosomal protein, large P2 mRNA, complete cds Length = 345 Score = 46.1 bits (23), Expect = 0.088 Identities = 32/35 (91%) Strand = Plus / Plus Query: 318 ccaaggaggaggagaagaaggaagaacccgaggag 352 ||||| ||||||||||||||||||| |||||||| Sbjct: 275 ccaagaaggaggagaagaaggaagagtccgaggag 309
>gb|DQ440047.1| Aedes aegypti clone AE-294 60S acidic ribosomal protein P1 mRNA, complete cds Length = 339 Score = 46.1 bits (23), Expect = 0.088 Identities = 55/65 (84%), Gaps = 3/65 (4%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaagaacccgaggaggaatcagatggcgagatgggattcagt 379 ||||| ||| ||||| ||||||||||||||||| || |||| ||| ||||||||| || Sbjct: 271 aaggaagagaagaaggaggaagaacccgaggag---tccgatgacgatatgggattcggt 327 Query: 380 ctgtt 384 ||||| Sbjct: 328 ctgtt 332
>ref|XM_656186.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3674.2), mRNA Length = 1671 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaaga 342 ||||||||||||||||||||||| Sbjct: 1045 aaggaggaggagaagaaggaaga 1067
>gb|AF039040.1| Caenorhabditis elegans cosmid T22B11, complete sequence Length = 35564 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 321 aggaggaggagaagaaggaagaa 343 ||||||||||||||||||||||| Sbjct: 10342 aggaggaggagaagaaggaagaa 10364
>gb|AC157650.2| Mus musculus BAC clone RP24-573N21 from chromosome 14, complete sequence Length = 186859 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 320 aaggaggaggagaagaaggaaga 342 ||||||||||||||||||||||| Sbjct: 28563 aaggaggaggagaagaaggaaga 28541 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 320 aaggaggaggagaagaaggaaga 342 ||||||||||||||||||||||| Sbjct: 28455 aaggaggaggagaagaaggaaga 28433 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 320 aaggaggaggagaagaaggaaga 342 ||||||||||||||||||||||| Sbjct: 28035 aaggaggaggagaagaaggaaga 28013 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 320 aaggaggaggagaagaaggaaga 342 ||||||||||||||||||||||| Sbjct: 27933 aaggaggaggagaagaaggaaga 27911
>gb|AC121604.3| Mus musculus BAC clone RP23-312E2 from chromosome 8, complete sequence Length = 209383 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 321 aggaggaggagaagaaggaagaa 343 ||||||||||||||||||||||| Sbjct: 25260 aggaggaggagaagaaggaagaa 25238
>gb|AC131785.3| Mus musculus BAC clone RP24-397D13 from chromosome 17, complete sequence Length = 147557 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 321 aggaggaggagaagaaggaagaa 343 ||||||||||||||||||||||| Sbjct: 86334 aggaggaggagaagaaggaagaa 86312
>gb|AC126670.4| Mus musculus BAC clone RP24-469G14 from chromosome 1, complete sequence Length = 200595 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 321 aggaggaggagaagaaggaagaa 343 ||||||||||||||||||||||| Sbjct: 150230 aggaggaggagaagaaggaagaa 150252
>gb|AC127374.4| Mus musculus BAC clone RP23-46G11 from chromosome 8, complete sequence Length = 180143 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaaga 342 ||||||||||||||||||||||| Sbjct: 138054 aaggaggaggagaagaaggaaga 138076
>gb|AC123558.5| Mus musculus BAC clone RP23-336N16 from chromosome 5, complete sequence Length = 211763 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 321 aggaggaggagaagaaggaagaa 343 ||||||||||||||||||||||| Sbjct: 167168 aggaggaggagaagaaggaagaa 167146
>gb|AC121862.3| Mus musculus BAC clone RP24-110E10 from chromosome 14, complete sequence Length = 178501 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaaga 342 ||||||||||||||||||||||| Sbjct: 16309 aaggaggaggagaagaaggaaga 16331 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaaga 342 ||||||||||||||||||||||| Sbjct: 16207 aaggaggaggagaagaaggaaga 16229 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaaga 342 ||||||||||||||||||||||| Sbjct: 16084 aaggaggaggagaagaaggaaga 16106 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaaga 342 ||||||||||||||||||||||| Sbjct: 15664 aaggaggaggagaagaaggaaga 15686 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaaga 342 ||||||||||||||||||||||| Sbjct: 15556 aaggaggaggagaagaaggaaga 15578
>gb|AC122246.5| Mus musculus BAC clone RP23-152K13 from 1, complete sequence Length = 203739 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 321 aggaggaggagaagaaggaagaa 343 ||||||||||||||||||||||| Sbjct: 16600 aggaggaggagaagaaggaagaa 16622
>gb|AC125344.2| Mus musculus BAC clone RP24-332H21 from 12, complete sequence Length = 179908 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 321 aggaggaggagaagaaggaagaa 343 ||||||||||||||||||||||| Sbjct: 166636 aggaggaggagaagaaggaagaa 166658
>emb|CR637846.2|CNS0ER4S Tetraodon nigroviridis full-length cDNA Length = 516 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaaga 342 ||||||||||||||||||||||| Sbjct: 406 aaggaggaggagaagaaggaaga 428
>emb|AL596188.6| Human DNA sequence from clone CTA-31J9 on chromosome 6 Contains the 5' part of a novel gene, a novel gene and a CpG island, complete sequence Length = 69676 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaaga 342 ||||||||||||||||||||||| Sbjct: 16815 aaggaggaggagaagaaggaaga 16837
>emb|AL157388.12| Human DNA sequence from clone RP11-215A21 on chromosome 10 Contains the 5' end of a novel gene (MGC33215), a ribosomal protein L17 (rpL23) (RPL17) pseudogene and three CpG islands, complete sequence Length = 183382 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 321 aggaggaggagaagaaggaagaa 343 ||||||||||||||||||||||| Sbjct: 173606 aggaggaggagaagaaggaagaa 173628
>gb|AY239227.1| Eimeria maxima TFP250 mRNA, complete cds Length = 7990 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 321 aggaggaggagaagaaggaagaa 343 ||||||||||||||||||||||| Sbjct: 7045 aggaggaggagaagaaggaagaa 7067
>emb|BX071599.1|CNS09RER Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC9AG12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 322 Score = 46.1 bits (23), Expect = 0.088 Identities = 29/31 (93%) Strand = Plus / Minus Query: 234 tcaaggagtacctcaaggacccgagcaagtt 264 ||||||||| | ||||||||||||||||||| Sbjct: 131 tcaaggagttcatcaaggacccgagcaagtt 101
>emb|BX052086.1|CNS09CCQ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC3AB05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 956 Score = 46.1 bits (23), Expect = 0.088 Identities = 29/31 (93%) Strand = Plus / Minus Query: 234 tcaaggagtacctcaaggacccgagcaagtt 264 ||||||||| | ||||||||||||||||||| Sbjct: 433 tcaaggagttcatcaaggacccgagcaagtt 403
>emb|BX052085.1|CNS09CCP Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC3AB05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1013 Score = 46.1 bits (23), Expect = 0.088 Identities = 29/31 (93%) Strand = Plus / Plus Query: 234 tcaaggagtacctcaaggacccgagcaagtt 264 ||||||||| | ||||||||||||||||||| Sbjct: 871 tcaaggagttcatcaaggacccgagcaagtt 901
>emb|CR938347.1| Single read from an extremity of a full-length cDNA clone made from Aedes aegypti total adult females. 5-prime end of clone KW0AAA2YC06AAM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 631 Score = 46.1 bits (23), Expect = 0.088 Identities = 55/65 (84%), Gaps = 3/65 (4%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaagaacccgaggaggaatcagatggcgagatgggattcagt 379 ||||| ||| ||||| ||||||||||||||||| || |||| ||| ||||||||| || Sbjct: 364 aaggaagagaagaaggaggaagaacccgaggag---tccgatgacgatatgggattcggt 420 Query: 380 ctgtt 384 ||||| Sbjct: 421 ctgtt 425
>emb|CR937313.1| Single read from an extremity of a cDNA clone made from Aedes aegypti total adult females. 5-prime end of clone KW0AAB2YG10AAM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 583 Score = 46.1 bits (23), Expect = 0.088 Identities = 55/65 (84%), Gaps = 3/65 (4%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaagaacccgaggaggaatcagatggcgagatgggattcagt 379 ||||| ||| ||||| ||||||||||||||||| || |||| ||| ||||||||| || Sbjct: 363 aaggaagagaagaaggaggaagaacccgaggag---tccgatgacgatatgggattcggt 419 Query: 380 ctgtt 384 ||||| Sbjct: 420 ctgtt 424
>emb|CR937312.1| Single read from an extremity of a cDNA clone made from Aedes aegypti total adult females. 3-prime end of clone KW0AAB2YG10BBM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 566 Score = 46.1 bits (23), Expect = 0.088 Identities = 55/65 (84%), Gaps = 3/65 (4%) Strand = Plus / Minus Query: 320 aaggaggaggagaagaaggaagaacccgaggaggaatcagatggcgagatgggattcagt 379 ||||| ||| ||||| ||||||||||||||||| || |||| ||| ||||||||| || Sbjct: 203 aaggaagagaagaaggaggaagaacccgaggag---tccgatgacgatatgggattcggt 147 Query: 380 ctgtt 384 ||||| Sbjct: 146 ctgtt 142
>gb|AC163649.3| Mus musculus BAC clone RP24-372B10 from chromosome 3, complete sequence Length = 154740 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 321 aggaggaggagaagaaggaagaa 343 ||||||||||||||||||||||| Sbjct: 50603 aggaggaggagaagaaggaagaa 50581
>gb|AC110377.5| Mus musculus BAC clone RP23-460A13 from chromosome 12, complete sequence Length = 196540 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 321 aggaggaggagaagaaggaagaa 343 ||||||||||||||||||||||| Sbjct: 146109 aggaggaggagaagaaggaagaa 146087
>gb|DQ066207.1| Ixodes scapularis isolate ISUFL46 ribosomal protein LP2 mRNA, complete cds Length = 345 Score = 46.1 bits (23), Expect = 0.088 Identities = 32/35 (91%) Strand = Plus / Plus Query: 318 ccaaggaggaggagaagaaggaagaacccgaggag 352 ||||| ||||||||||||| |||||| |||||||| Sbjct: 275 ccaagaaggaggagaagaaagaagaatccgaggag 309
>ref|NM_001028223.2| Caenorhabditis elegans T22B11.4b (T22B11.4) mRNA, complete cds Length = 1935 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 321 aggaggaggagaagaaggaagaa 343 ||||||||||||||||||||||| Sbjct: 1035 aggaggaggagaagaaggaagaa 1057
>ref|NM_001028222.2| Caenorhabditis elegans T22B11.4a (T22B11.4) mRNA, complete cds Length = 1958 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 321 aggaggaggagaagaaggaagaa 343 ||||||||||||||||||||||| Sbjct: 1035 aggaggaggagaagaaggaagaa 1057
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 235 caaggagtacctcaaggacccga 257 ||||||||||||||||||||||| Sbjct: 31019529 caaggagtacctcaaggacccga 31019551 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 326 gaggagaagaaggaagaacccgaggag 352 |||||||||||||||||| |||||||| Sbjct: 10714634 gaggagaagaaggaagaagccgaggag 10714608 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 318 ccaaggaggaggagaagaaggaaga 342 ||||| ||||||||||||||||||| Sbjct: 22578591 ccaagaaggaggagaagaaggaaga 22578567 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 aggaggaggagaagaaggaag 341 ||||||||||||||||||||| Sbjct: 4617592 aggaggaggagaagaaggaag 4617572
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 317 cccaaggaggaggagaagaagga 339 ||||||||||||||||||||||| Sbjct: 8232557 cccaaggaggaggagaagaagga 8232579 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 gtttccatggttgcctcactg 115 ||||||||||||||||||||| Sbjct: 42649624 gtttccatggttgcctcactg 42649604
>gb|AY826878.1| Heterocapsa triquetra clone HTEFTS1 chloroplast translation factor Ts mRNA, partial cds; nuclear gene for chloroplast product Length = 1657 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 317 cccaaggaggaggagaagaagga 339 ||||||||||||||||||||||| Sbjct: 960 cccaaggaggaggagaagaagga 982
>dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0434D08 Length = 161266 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 317 cccaaggaggaggagaagaagga 339 ||||||||||||||||||||||| Sbjct: 26488 cccaaggaggaggagaagaagga 26510
>dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516G10 Length = 148937 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 235 caaggagtacctcaaggacccga 257 ||||||||||||||||||||||| Sbjct: 74485 caaggagtacctcaaggacccga 74507
>dbj|AP004800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0585G03 Length = 173649 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 235 caaggagtacctcaaggacccga 257 ||||||||||||||||||||||| Sbjct: 8753 caaggagtacctcaaggacccga 8775
>dbj|AP005533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0018M09 Length = 157377 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 326 gaggagaagaaggaagaacccgaggag 352 |||||||||||||||||| |||||||| Sbjct: 132324 gaggagaagaaggaagaagccgaggag 132298
>dbj|AP004001.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_D03 Length = 169378 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 326 gaggagaagaaggaagaacccgaggag 352 |||||||||||||||||| |||||||| Sbjct: 54115 gaggagaagaaggaagaagccgaggag 54089
>dbj|AK071385.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092C13, full insert sequence Length = 1726 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 235 caaggagtacctcaaggacccga 257 ||||||||||||||||||||||| Sbjct: 1127 caaggagtacctcaaggacccga 1149
>dbj|AK058613.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-A12, full insert sequence Length = 1080 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Plus Query: 326 gaggagaagaaggaagaacccgaggag 352 |||||||||||||||||| |||||||| Sbjct: 617 gaggagaagaaggaagaagccgaggag 643
>tpe|BN000560.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx31 gene for class III peroxidase 31 precursor, exon 1 Length = 1353 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 235 caaggagtacctcaaggacccga 257 ||||||||||||||||||||||| Sbjct: 1050 caaggagtacctcaaggacccga 1072
>gb|AC117614.12| Mus musculus chromosome 5, clone RP23-110C17, complete sequence Length = 222809 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 321 aggaggaggagaagaaggaagaa 343 ||||||||||||||||||||||| Sbjct: 125928 aggaggaggagaagaaggaagaa 125950
>gb|AC140416.2| Mus musculus BAC clone RP24-347A16 from 6, complete sequence Length = 188390 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 321 aggaggaggagaagaaggaagaa 343 ||||||||||||||||||||||| Sbjct: 152892 aggaggaggagaagaaggaagaa 152914
>gb|AC122486.4| Mus musculus BAC clone RP24-380B9 from 12, complete sequence Length = 128253 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 321 aggaggaggagaagaaggaagaa 343 ||||||||||||||||||||||| Sbjct: 515 aggaggaggagaagaaggaagaa 537
>gb|AC124344.6| Mus musculus BAC clone RP24-448A7 from 3, complete sequence Length = 219818 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 321 aggaggaggagaagaaggaagaa 343 ||||||||||||||||||||||| Sbjct: 161006 aggaggaggagaagaaggaagaa 160984
>gb|AC132407.3| Mus musculus BAC clone RP23-343G12 from 8, complete sequence Length = 205357 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 320 aaggaggaggagaagaaggaaga 342 ||||||||||||||||||||||| Sbjct: 186893 aaggaggaggagaagaaggaaga 186871
>gb|U62752.1|ZMU62752 Zea mays acidic ribosomal protein P1a (rpp1a) mRNA, complete cds Length = 573 Score = 46.1 bits (23), Expect = 0.088 Identities = 50/59 (84%) Strand = Plus / Plus Query: 326 gaggagaagaaggaagaacccgaggaggaatcagatggcgagatgggattcagtctgtt 384 ||||||||||||||||| || ||||||| || |||| ||| ||||| ||||| ||||| Sbjct: 296 gaggagaagaaggaagaggccaaggaggagtctgatgacgacatgggcttcagcctgtt 354
>gb|U40147.1|ZMU40147 Zea mays ribosomal protein L12 mRNA, complete cds Length = 530 Score = 46.1 bits (23), Expect = 0.088 Identities = 50/59 (84%) Strand = Plus / Plus Query: 326 gaggagaagaaggaagaacccgaggaggaatcagatggcgagatgggattcagtctgtt 384 ||||||||||||||||| || ||||||| || |||| ||| ||||| ||||| ||||| Sbjct: 331 gaggagaagaaggaagaggccaaggaggagtctgatgacgacatgggcttcagcctgtt 389
>gb|DQ270163.1| Cricetulus barabensis clone L5 microsatellite sequence Length = 748 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 321 aggaggaggagaagaaggaagaa 343 ||||||||||||||||||||||| Sbjct: 329 aggaggaggagaagaaggaagaa 307
>emb|AL596331.15| Mouse DNA sequence from clone RP23-81G14 on chromosome 11, complete sequence Length = 228391 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 321 aggaggaggagaagaaggaagaa 343 ||||||||||||||||||||||| Sbjct: 180908 aggaggaggagaagaaggaagaa 180930
>emb|AL627236.11| Mouse DNA sequence from clone RP23-384G12 on chromosome 4, complete sequence Length = 201752 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 321 aggaggaggagaagaaggaagaa 343 ||||||||||||||||||||||| Sbjct: 84257 aggaggaggagaagaaggaagaa 84235
>gb|L24094.1|GORADPRB Gorilla gorilla ADP-ribosyltransferase (NAD+) pseudogene, repeat region Length = 5787 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 123 cgatctcataccccaccatggct 145 ||||||||||||||||||||||| Sbjct: 3359 cgatctcataccccaccatggct 3337
>gb|AC114554.8| Mus musculus chromosome 5, clone RP23-414E14, complete sequence Length = 204467 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 321 aggaggaggagaagaaggaaga 342 |||||||||||||||||||||| Sbjct: 125122 aggaggaggagaagaaggaaga 125143
>gb|DQ213908.1| Taeniopygia guttata clone 0061P0002B01 mRNA sequence Length = 752 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 321 aggaggaggagaagaaggaaga 342 |||||||||||||||||||||| Sbjct: 500 aggaggaggagaagaaggaaga 521
>gb|BT018956.1| Zea mays clone Contig167.F mRNA sequence Length = 1302 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 318 ccaaggaggaggagaagaagga 339 |||||||||||||||||||||| Sbjct: 748 ccaaggaggaggagaagaagga 769
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence Length = 1178688 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 318 ccaaggaggaggagaagaagga 339 |||||||||||||||||||||| Sbjct: 287919 ccaaggaggaggagaagaagga 287940
>gb|AC128859.4| Rattus norvegicus 10 BAC CH230-436I22 (Children's Hospital Oakland Research Institute) complete sequence Length = 156078 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 320 aaggaggaggagaagaaggaag 341 |||||||||||||||||||||| Sbjct: 100707 aaggaggaggagaagaaggaag 100686 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 319 caaggaggaggagaagaagga 339 ||||||||||||||||||||| Sbjct: 99438 caaggaggaggagaagaagga 99418 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 aaggaggaggagaagaagga 339 |||||||||||||||||||| Sbjct: 101969 aaggaggaggagaagaagga 101950 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 aaggaggaggagaagaagga 339 |||||||||||||||||||| Sbjct: 101954 aaggaggaggagaagaagga 101935 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 aaggaggaggagaagaagga 339 |||||||||||||||||||| Sbjct: 101562 aaggaggaggagaagaagga 101543
>gb|AC124614.11| Mus musculus chromosome 10, clone RP24-417L12, complete sequence Length = 173306 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 321 aggaggaggagaagaaggaaga 342 |||||||||||||||||||||| Sbjct: 94703 aggaggaggagaagaaggaaga 94724
>gb|AC114674.10| Mus musculus chromosome 9, clone RP24-209N21, complete sequence Length = 203120 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 321 aggaggaggagaagaaggaaga 342 |||||||||||||||||||||| Sbjct: 62037 aggaggaggagaagaaggaaga 62058
>gb|AC140426.3| Mus musculus BAC clone RP24-98A17 from chromosome 14, complete sequence Length = 189282 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 321 aggaggaggagaagaaggaaga 342 |||||||||||||||||||||| Sbjct: 149797 aggaggaggagaagaaggaaga 149776
>gb|AY391258.1| Oxyrrhis marina heat shock protein 90 gene, partial cds Length = 1713 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 321 aggaggaggagaagaaggaaga 342 |||||||||||||||||||||| Sbjct: 611 aggaggaggagaagaaggaaga 632
>gb|AC133514.4| Mus musculus BAC clone RP23-212F6 from chromosome 5, complete sequence Length = 208083 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 155 cacatgttcctcaatgcataca 176 |||||||||||||||||||||| Sbjct: 71917 cacatgttcctcaatgcataca 71896
>ref|XM_755686.1| Ustilago maydis 521 hypothetical protein (UM04632.1) partial mRNA Length = 336 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 318 ccaaggaggaggagaagaagga 339 |||||||||||||||||||||| Sbjct: 263 ccaaggaggaggagaagaagga 284
>ref|XM_572834.1| Cryptococcus neoformans var. neoformans JEC21 polyadenylate-binding protein (CNI01160) partial mRNA Length = 2329 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 318 ccaaggaggaggagaagaagga 339 |||||||||||||||||||||| Sbjct: 2118 ccaaggaggaggagaagaagga 2139
>gb|AC125057.5| Mus musculus BAC clone RP23-399K1 from chromosome 12, complete sequence Length = 182276 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 321 aggaggaggagaagaaggaaga 342 |||||||||||||||||||||| Sbjct: 92078 aggaggaggagaagaaggaaga 92099
>gb|AC125128.3| Mus musculus BAC clone RP24-289N17 from chromosome 14, complete sequence Length = 180645 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 321 aggaggaggagaagaaggaaga 342 |||||||||||||||||||||| Sbjct: 27128 aggaggaggagaagaaggaaga 27107
>gb|DQ334167.1| Drosophila miranda CG3620 gene, partial cds Length = 1053 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 318 ccaaggaggaggagaagaagga 339 |||||||||||||||||||||| Sbjct: 728 ccaaggaggaggagaagaagga 749
>emb|Z70280.1|HSV210E9 Human DNA sequence from clone GHc-210E9 on chromosome X Contains the 5' end of the DRP2 gene for dystrophin related protein 2, a pseudogene similar to part of tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein and a CpG island, complete sequence Length = 37194 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 321 aggaggaggagaagaaggaaga 342 |||||||||||||||||||||| Sbjct: 3112 aggaggaggagaagaaggaaga 3091
>emb|BX649553.6| Human DNA sequence from clone RP4-674K6 on chromosome X, complete sequence Length = 86882 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 321 aggaggaggagaagaaggaaga 342 |||||||||||||||||||||| Sbjct: 54271 aggaggaggagaagaaggaaga 54250
>emb|AL160162.11| Human DNA sequence from clone RP1-200K18 on chromosome 6 Contains a novel gene, complete sequence Length = 82329 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 320 aaggaggaggagaagaaggaag 341 |||||||||||||||||||||| Sbjct: 43622 aaggaggaggagaagaaggaag 43601
>emb|AL138809.18| Human DNA sequence from clone RP5-981M18 on chromosome 20 Contains ESTs, STSs and GSSs, complete sequence Length = 94710 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 322 ggaggaggagaagaaggaagaa 343 |||||||||||||||||||||| Sbjct: 63339 ggaggaggagaagaaggaagaa 63360
>emb|AL662806.20| Mouse DNA sequence from clone RP23-273O7 on chromosome 11 Contains the 5' end of the Cyfip2 gene for cytoplasmic FMR1 interacting protein 2, the Itk gene for IL2-inducible T-cell kinase, two novel genes and a CpG island, complete sequence Length = 161754 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 321 aggaggaggagaagaaggaaga 342 |||||||||||||||||||||| Sbjct: 17771 aggaggaggagaagaaggaaga 17792
>gb|AC164578.5| Mus musculus BAC RP23-15E20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 225564 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 321 aggaggaggagaagaaggaaga 342 |||||||||||||||||||||| Sbjct: 110761 aggaggaggagaagaaggaaga 110782
>emb|AL645971.12| Mouse DNA sequence from clone RP23-378J19 on chromosome 11 Vontains the 5' end of the gene for novel protein similar to human RAP1 GTPase activating protein 1 RAP1GA1,,a novel gene and three CpG islands, complete sequence Length = 102898 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 321 aggaggaggagaagaaggaaga 342 |||||||||||||||||||||| Sbjct: 72307 aggaggaggagaagaaggaaga 72328
>emb|AL928566.4| Mouse DNA sequence from clone RP23-311A20 on chromosome 4 Contains a CCHC domain containing zinc finger 9 (Zcchc9) pseudogene, complete sequence Length = 160214 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 320 aaggaggaggagaagaaggaag 341 |||||||||||||||||||||| Sbjct: 100161 aaggaggaggagaagaaggaag 100140
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 136 caccatggctgctgcaccgcac 157 |||||||||||||||||||||| Sbjct: 4483133 caccatggctgctgcaccgcac 4483112
>gb|AC127520.5| Homo sapiens chromosome 15, clone RP11-825M14, complete sequence Length = 155382 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 321 aggaggaggagaagaaggaaga 342 |||||||||||||||||||||| Sbjct: 144285 aggaggaggagaagaaggaaga 144306
>gb|AC150899.3| Mus musculus BAC clone RP23-179F8 from chromosome 10, complete sequence Length = 202346 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 321 aggaggaggagaagaaggaaga 342 |||||||||||||||||||||| Sbjct: 687 aggaggaggagaagaaggaaga 708
>gb|AC009063.8| Homo sapiens chromosome 16 clone RP11-298D21, complete sequence Length = 194237 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 321 aggaggaggagaagaaggaaga 342 |||||||||||||||||||||| Sbjct: 92820 aggaggaggagaagaaggaaga 92799
>gb|DQ066213.1| Ixodes scapularis isolate ISUFL22 60S acidic ribosomal protein P0 mRNA, complete cds Length = 960 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 caaggagtacctcaaggacccg 256 |||||||||||||||||||||| Sbjct: 795 caaggagtacctcaaggacccg 816 Score = 40.1 bits (20), Expect = 5.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaagaacccgaggaggaa 355 |||||||||| ||||| |||||| ||||||||||| Sbjct: 892 aaggaggaggctaagaaagaagaatccgaggaggaa 927
>gb|AC158658.4| Mus musculus 6 BAC RP23-400L4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 197909 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 321 aggaggaggagaagaaggaaga 342 |||||||||||||||||||||| Sbjct: 55691 aggaggaggagaagaaggaaga 55670
>gb|AC012320.6|AC012320 Homo sapiens chromosome 16 clone RP11-280N16, complete sequence Length = 189840 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 321 aggaggaggagaagaaggaaga 342 |||||||||||||||||||||| Sbjct: 32979 aggaggaggagaagaaggaaga 32958
>gb|AC097586.3| Sus scrofa clone RP44-394E19, complete sequence Length = 174554 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 321 aggaggaggagaagaaggaaga 342 |||||||||||||||||||||| Sbjct: 128969 aggaggaggagaagaaggaaga 128990
>gb|AC068831.17| Homo sapiens chromosome 15, clone RP11-2O19, complete sequence Length = 136975 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 321 aggaggaggagaagaaggaaga 342 |||||||||||||||||||||| Sbjct: 136910 aggaggaggagaagaaggaaga 136889
>gb|AF227622.1|AF227622 Euphorbia esula 60S acidic ribosomal protein PO mRNA, partial cds Length = 1127 Score = 44.1 bits (22), Expect = 0.35 Identities = 49/58 (84%) Strand = Plus / Plus Query: 126 tctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatgt 183 |||||||||| || | |||||||| || ||||||||| | ||||| ||||||||||| Sbjct: 686 tctcatacccaactctagctgctgccccccacatgttcattaatgcctacaagaatgt 743
>emb|AJ322895.1|HSA322895 Homo sapiens genomic sequence surrounding NotI site, clone NR1-OC4R Length = 843 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaag 341 |||||||||||||||||||||| Sbjct: 552 aaggaggaggagaagaaggaag 573
>dbj|AP000722.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-675M1, complete sequence Length = 177882 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 322 ggaggaggagaagaaggaagaa 343 |||||||||||||||||||||| Sbjct: 14243 ggaggaggagaagaaggaagaa 14264
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 136 caccatggctgctgcaccgcac 157 |||||||||||||||||||||| Sbjct: 4485696 caccatggctgctgcaccgcac 4485675
>dbj|AP003124.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-447G14, complete sequence Length = 177483 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 322 ggaggaggagaagaaggaagaa 343 |||||||||||||||||||||| Sbjct: 105123 ggaggaggagaagaaggaagaa 105144
>dbj|AP002469.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-266E8, complete sequence Length = 158977 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 320 aaggaggaggagaagaaggaag 341 |||||||||||||||||||||| Sbjct: 110161 aaggaggaggagaagaaggaag 110140
>dbj|AP002762.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-811I7, complete sequence Length = 189993 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 320 aaggaggaggagaagaaggaag 341 |||||||||||||||||||||| Sbjct: 6996 aaggaggaggagaagaaggaag 6975
>emb|AL671672.4| Mouse DNA sequence from clone RP23-461E2 on chromosome 4, complete sequence Length = 191255 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 321 aggaggaggagaagaaggaaga 342 |||||||||||||||||||||| Sbjct: 6205 aggaggaggagaagaaggaaga 6226
>emb|AL844609.6| Mouse DNA sequence from clone RP23-356F8 on chromosome 4, complete sequence Length = 191676 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 321 aggaggaggagaagaaggaaga 342 |||||||||||||||||||||| Sbjct: 47885 aggaggaggagaagaaggaaga 47864
>emb|AL731783.10| Mouse DNA sequence from clone RP23-124E18 on chromosome 2, complete sequence Length = 207209 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 321 aggaggaggagaagaaggaaga 342 |||||||||||||||||||||| Sbjct: 60129 aggaggaggagaagaaggaaga 60108
>ref|NM_125750.3| Arabidopsis thaliana unknown protein AT5G63550 mRNA, complete cds Length = 1871 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 ggaggaggagaagaaggaaga 342 ||||||||||||||||||||| Sbjct: 172 ggaggaggagaagaaggaaga 192
>gb|AC168056.3| Mus musculus BAC clone RP24-189B1 from chromosome 13, complete sequence Length = 179458 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 aggaggaggagaagaaggaag 341 ||||||||||||||||||||| Sbjct: 155473 aggaggaggagaagaaggaag 155453
>gb|AC163684.5| Mus musculus BAC clone RP23-8N10 from chromosome 13, complete sequence Length = 234717 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 aggaggaggagaagaaggaag 341 ||||||||||||||||||||| Sbjct: 94001 aggaggaggagaagaaggaag 93981
>ref|XM_466417.1| Oryza sativa (japonica cultivar-group), mRNA Length = 330 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 318 ccaaggaggaggagaagaaggaaga 342 ||||| ||||||||||||||||||| Sbjct: 227 ccaagaaggaggagaagaaggaaga 251
>ref|NM_001017204.2| Xenopus tropicalis hypothetical protein LOC549958 (LOC549958), mRNA Length = 480 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaagaacccgaggag 352 ||||| || ||||||||||||||| |||||||| Sbjct: 348 aaggaagaagagaagaaggaagaatccgaggag 380
>gb|AC104414.8| Mus musculus chromosome 3, clone RP23-99I7, complete sequence Length = 212613 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 320 aaggaggaggagaagaaggaagaac 344 |||||||||||||||||||| |||| Sbjct: 187989 aaggaggaggagaagaaggaggaac 187965
>gb|AC102270.8| Mus musculus chromosome 3, clone RP24-266A23, complete sequence Length = 185321 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 320 aaggaggaggagaagaaggaagaac 344 |||||||||||||||||||| |||| Sbjct: 887 aaggaggaggagaagaaggaggaac 863
>gb|AF039037.2| Caenorhabditis elegans cosmid R02C2, complete sequence Length = 24361 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaa 340 ||||||||||||||||||||| Sbjct: 7038 aaggaggaggagaagaaggaa 7058
>gb|AC110567.10| Mus musculus chromosome 5, clone RP23-304I24, complete sequence Length = 188137 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 aggaggaggagaagaaggaag 341 ||||||||||||||||||||| Sbjct: 70969 aggaggaggagaagaaggaag 70989
>ref|XM_360515.1| Magnaporthe grisea 70-15 hypothetical protein (MG10827.4) partial mRNA Length = 330 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 318 ccaaggaggaggagaagaaggaaga 342 ||||||||||||||||| ||||||| Sbjct: 260 ccaaggaggaggagaaggaggaaga 284
>gb|AY550907.1| Mus musculus embryonic stem cell-related protein mRNA, complete cds Length = 1616 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaagaac 344 ||||||||||||||| ||||||||| Sbjct: 620 aaggaggaggagaaggaggaagaac 644
>ref|NM_001006887.2| Xenopus tropicalis polymerase (RNA) II (DNA directed) polypeptide F (polr2f), mRNA Length = 765 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaagaacccgaggag 352 ||||| || ||||||||||||||| |||||||| Sbjct: 594 aaggaagaagagaagaaggaagaatccgaggag 626
>ref|NM_026560.2| Mus musculus cell division cycle associated 8 (Cdca8), mRNA Length = 1616 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaagaac 344 ||||||||||||||| ||||||||| Sbjct: 620 aaggaggaggagaaggaggaagaac 644
>gb|AC164588.4| Mus musculus chromosome 5, clone RP24-304H2, complete sequence Length = 188602 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 323 gaggaggagaagaaggaagaa 343 ||||||||||||||||||||| Sbjct: 122094 gaggaggagaagaaggaagaa 122074
>gb|AC161042.4| Mus musculus chromosome 8, clone RP24-278L20, complete sequence Length = 174823 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaa 340 ||||||||||||||||||||| Sbjct: 139125 aaggaggaggagaagaaggaa 139145
>gb|AC111125.11| Mus musculus chromosome 9, clone RP23-331P8, complete sequence Length = 260036 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 aggaggaggagaagaaggaag 341 ||||||||||||||||||||| Sbjct: 106109 aggaggaggagaagaaggaag 106089
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 136 caccatggctgctgcaccgca 156 ||||||||||||||||||||| Sbjct: 279884 caccatggctgctgcaccgca 279864
>emb|CR974571.9| Mouse DNA sequence from clone RP23-145P19 on chromosome 12, complete sequence Length = 219782 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 aggaggaggagaagaaggaag 341 ||||||||||||||||||||| Sbjct: 87965 aggaggaggagaagaaggaag 87985
>gb|AC122199.4| Mus musculus BAC clone RP23-57C9 from chromosome 8, complete sequence Length = 202975 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 323 gaggaggagaagaaggaagaa 343 ||||||||||||||||||||| Sbjct: 131112 gaggaggagaagaaggaagaa 131092
>ref|XM_812376.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506227.250) partial mRNA Length = 1449 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 321 aggaggaggagaagaaggaagaacc 345 ||||||||||||| ||||||||||| Sbjct: 1432 aggaggaggagaaaaaggaagaacc 1408
>emb|CR729373.2|CNS0GPQB Tetraodon nigroviridis full-length cDNA Length = 463 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 324 aggaggagaagaaggaagaacccga 348 ||||||||||||||||||| ||||| Sbjct: 411 aggaggagaagaaggaagagcccga 435
>gb|AY232068.1| Drosophila yakuba clone yak-ad_RpP1 mRNA sequence Length = 339 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 318 ccaaggaggaggagaagaaggaaga 342 ||||| ||||||||||||||||||| Sbjct: 272 ccaagaaggaggagaagaaggaaga 296
>gb|AY231736.1| Drosophila yakuba clone yak-em_RpP1 mRNA sequence Length = 339 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 318 ccaaggaggaggagaagaaggaaga 342 ||||| ||||||||||||||||||| Sbjct: 272 ccaagaaggaggagaagaaggaaga 296
>emb|AL138847.14| Human DNA sequence from clone RP5-849H19 on chromosome 1p32.1-33 Contains part of the DOCK7 gene for dedicator of cytokinesis 7, a ribosomal protein L13a (RPL13A) and the ANGPTL3 gene for angiopoietin-like 3, complete sequence Length = 66673 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 323 gaggaggagaagaaggaagaa 343 ||||||||||||||||||||| Sbjct: 41492 gaggaggagaagaaggaagaa 41512
>emb|BX070623.1|CNS09QNN Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC7DB12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 514 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 232 gatcaaggagtacctcaaggacccgagcaagtt 264 ||||||||||| | ||||||| ||||||||||| Sbjct: 63 gatcaaggagttcatcaaggatccgagcaagtt 31
>emb|BX070622.1|CNS09QNM Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC7DB12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 966 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 232 gatcaaggagtacctcaaggacccgagcaagtt 264 ||||||||||| | ||||||| ||||||||||| Sbjct: 863 gatcaaggagttcatcaaggatccgagcaagtt 895
>emb|BX010374.1|CNS08G62 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA16CG10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 816 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 232 gatcaaggagtacctcaaggacccgagcaagtt 264 ||||||||||| | ||||||| ||||||||||| Sbjct: 429 gatcaaggagttcatcaaggatccgagcaagtt 397
>gb|AC160401.8| Mus musculus 10 BAC RP23-244J10 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 169912 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaagaac 344 |||||||||||| |||||||||||| Sbjct: 22763 aaggaggaggaggagaaggaagaac 22787
>emb|CR937176.1| Single read from an extremity of a cDNA clone made from Aedes aegypti total adult females. 5-prime end of clone KW0AAB2YL14AAM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 577 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaagaacccgaggag 352 ||||| ||| ||||| ||||||||||||||||| Sbjct: 364 aaggaagagaagaaggaggaagaacccgaggag 396
>emb|AL606831.17| Mouse DNA sequence from clone RP23-432M23 on chromosome 11 Contains the 5' end of Ntn1 gene for netrin 1, three genes for a novel proteins (F730038I15Rik), the 3' end of a novel gene (4930535C22Rik) and two CpG islands, complete sequence Length = 221455 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 323 gaggaggagaagaaggaagaa 343 ||||||||||||||||||||| Sbjct: 154135 gaggaggagaagaaggaagaa 154115
>gb|AC023296.6| Homo sapiens chromosome 8, clone RP11-564K14, complete sequence Length = 189532 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 322 ggaggaggagaagaaggaaga 342 ||||||||||||||||||||| Sbjct: 126150 ggaggaggagaagaaggaaga 126130
>gb|AC163294.2| Mus musculus BAC clone RP23-187J1 from chromosome 9, complete sequence Length = 203706 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 319 caaggaggaggagaagaagga 339 ||||||||||||||||||||| Sbjct: 18533 caaggaggaggagaagaagga 18553
>gb|AC018655.5| Homo sapiens 12q BAC RP11-946G22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 16886 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaagaac 344 |||||||| |||||||||||||||| Sbjct: 10569 aaggaggatgagaagaaggaagaac 10593
>gb|AE011648.1| Xanthomonas axonopodis pv. citri str. 306, section 26 of 469 of the complete genome Length = 9977 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 137 accatggctgctgcaccgcac 157 ||||||||||||||||||||| Sbjct: 2549 accatggctgctgcaccgcac 2529
>gb|AC023403.9| Homo sapiens chromosome 8, clone RP11-563N12, complete sequence Length = 193461 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 aggaggaggagaagaaggaag 341 ||||||||||||||||||||| Sbjct: 93322 aggaggaggagaagaaggaag 93302
>gb|AC021549.9| Homo sapiens chromosome 18, clone RP11-650P15, complete sequence Length = 183066 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 49 cttgacctcactggaggaagatctg 73 ||||||||||||||| ||||||||| Sbjct: 109274 cttgacctcactggaagaagatctg 109298
>emb|BX664604.6| Zebrafish DNA sequence from clone CH211-253F20 in linkage group 7, complete sequence Length = 150508 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaa 340 ||||||||||||||||||||| Sbjct: 74470 aaggaggaggagaagaaggaa 74490
>gb|DQ295222.1| Spironucleus barkhanus cytosolic heat shock protein 90 (HSP90) mRNA, complete cds Length = 2278 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 319 caaggaggaggagaagaagga 339 ||||||||||||||||||||| Sbjct: 876 caaggaggaggagaagaagga 896
>gb|AC158998.2| Mus musculus BAC clone RP24-290P19 from chromosome 9, complete sequence Length = 173036 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 319 caaggaggaggagaagaagga 339 ||||||||||||||||||||| Sbjct: 75368 caaggaggaggagaagaagga 75348
>dbj|AK076422.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4831429J16 product:hypothetical protein, full insert sequence Length = 1603 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaagaac 344 ||||||||||||||| ||||||||| Sbjct: 620 aaggaggaggagaaggaggaagaac 644
>gb|AY177663.1| Homo sapiens desmoglein 4 preproprotein (DSG4) gene, complete cds Length = 37140 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 49 cttgacctcactggaggaagatctg 73 ||||||||||||||| ||||||||| Sbjct: 23618 cttgacctcactggaagaagatctg 23594
>gb|AC154820.2| Mus musculus BAC clone RP24-536H19 from chromosome 14, complete sequence Length = 148916 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 319 caaggaggaggagaagaagga 339 ||||||||||||||||||||| Sbjct: 89841 caaggaggaggagaagaagga 89861
>gb|BT005478.1| Arabidopsis thaliana clone U50052 unknown protein (At5g63550) mRNA, complete cds Length = 1624 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 ggaggaggagaagaaggaaga 342 ||||||||||||||||||||| Sbjct: 132 ggaggaggagaagaaggaaga 152
>dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0458E05 Length = 193577 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 gtttccatggttgcctcactg 115 ||||||||||||||||||||| Sbjct: 170507 gtttccatggttgcctcactg 170487
>gb|BT004149.1| Arabidopsis thaliana clone RAFL15-28-O07 (R50052) unknown protein (At5g63550) mRNA, complete cds Length = 1928 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 ggaggaggagaagaaggaaga 342 ||||||||||||||||||||| Sbjct: 213 ggaggaggagaagaaggaaga 233
>gb|AF274573.4| Homo sapiens chromosome X clone RP11-316K19, RP11-316M19, RP4-687A5 map q28, complete sequence Length = 189436 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 aggaggaggagaagaaggaag 341 ||||||||||||||||||||| Sbjct: 68541 aggaggaggagaagaaggaag 68561
>gb|AC119939.14| Mus musculus chromosome 5, clone RP24-267A23, complete sequence Length = 180700 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 323 gaggaggagaagaaggaagaa 343 ||||||||||||||||||||| Sbjct: 43616 gaggaggagaagaaggaagaa 43596
>dbj|AP004087.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1297_C09 Length = 163378 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 aggaggaggagaagaaggaag 341 ||||||||||||||||||||| Sbjct: 152971 aggaggaggagaagaaggaag 152951
>dbj|AP005644.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0056I22 Length = 147728 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 318 ccaaggaggaggagaagaaggaaga 342 ||||| ||||||||||||||||||| Sbjct: 26402 ccaagaaggaggagaagaaggaaga 26378
>dbj|AB007649.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MLE2 Length = 58527 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 ggaggaggagaagaaggaaga 342 ||||||||||||||||||||| Sbjct: 56590 ggaggaggagaagaaggaaga 56610
>dbj|AK072712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141I08, full insert sequence Length = 1724 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 aggaggaggagaagaaggaag 341 ||||||||||||||||||||| Sbjct: 33 aggaggaggagaagaaggaag 13
>emb|CR760503.2| Xenopus tropicalis finished cDNA, clone TEgg006f01 Length = 480 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaagaacccgaggag 352 ||||| || ||||||||||||||| |||||||| Sbjct: 348 aaggaagaagagaagaaggaagaatccgaggag 380
>emb|CR926191.2| Xenopus tropicalis finished cDNA, clone TNeu091i10 Length = 765 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaagaacccgaggag 352 ||||| || ||||||||||||||| |||||||| Sbjct: 594 aaggaagaagagaagaaggaagaatccgaggag 626
>gb|AC152984.2| Mus musculus 6 BAC RP23-462B3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 185001 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 aggaggaggagaagaaggaag 341 ||||||||||||||||||||| Sbjct: 58529 aggaggaggagaagaaggaag 58549
>emb|AJ870441.1| Fragaria x ananassa microsatellite DNA, locus UFFa02F02 Length = 199 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 317 cccaaggaggaggagaagaag 337 ||||||||||||||||||||| Sbjct: 130 cccaaggaggaggagaagaag 150
>emb|AL844544.9| Mouse DNA sequence from clone RP23-230B1 on chromosome 2, complete sequence Length = 156426 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 319 caaggaggaggagaagaaggaagaa 343 ||||||||||||| ||||||||||| Sbjct: 8332 caaggaggaggaggagaaggaagaa 8308
>gb|AC157656.3| Mus musculus BAC clone RP23-406A5 from chromosome 13, complete sequence Length = 189500 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 ggaggaggagaagaaggaaga 342 ||||||||||||||||||||| Sbjct: 80363 ggaggaggagaagaaggaaga 80383
>gb|AC153945.5| Mus musculus 10 BAC RP24-501G17 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 179734 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 320 aaggaggaggagaagaaggaagaac 344 |||||||||||| |||||||||||| Sbjct: 23480 aaggaggaggaggagaaggaagaac 23456 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aggaggaggagaagaaggaa 340 |||||||||||||||||||| Sbjct: 55455 aggaggaggagaagaaggaa 55436
>emb|AL669920.15| Mouse DNA sequence from clone RP23-263C23 on chromosome 11, complete sequence Length = 216776 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 323 gaggaggagaagaaggaagaa 343 ||||||||||||||||||||| Sbjct: 70813 gaggaggagaagaaggaagaa 70793
>emb|AL731766.27| Mouse DNA sequence from clone RP23-78B19 on chromosome 4, complete sequence Length = 144885 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 319 caaggaggaggagaagaagga 339 ||||||||||||||||||||| Sbjct: 44455 caaggaggaggagaagaagga 44435
>emb|AL831809.3|CNS08CAM Oryza sativa chromosome 12, . BAC OJ1268_D02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146585 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 aggaggaggagaagaaggaag 341 ||||||||||||||||||||| Sbjct: 115677 aggaggaggagaagaaggaag 115657
>emb|CR974592.5| Mouse DNA sequence from clone RP23-56C15 on chromosome 12, complete sequence Length = 201549 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 aggaggaggagaagaaggaag 341 ||||||||||||||||||||| Sbjct: 97277 aggaggaggagaagaaggaag 97257
>gb|AF045249.1|AF045249 Leishmania peruviana acidic ribosomal protein P1 mRNA, complete cds Length = 628 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 322 ggaggaggagaagaaggaagaacccgaggagga 354 ||||||| |||||||||| || ||||||||||| Sbjct: 280 ggaggagaagaagaaggaggagcccgaggagga 312
>gb|AC159253.3| Mus musculus BAC clone RP24-110K11 from chromosome 3, complete sequence Length = 197735 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 323 gaggaggagaagaaggaagaa 343 ||||||||||||||||||||| Sbjct: 66471 gaggaggagaagaaggaagaa 66451
>emb|AL808120.9| Mouse DNA sequence from clone RP23-418E2 on chromosome X, complete sequence Length = 148328 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 319 caaggaggaggagaagaagga 339 ||||||||||||||||||||| Sbjct: 59445 caaggaggaggagaagaagga 59425
>emb|AL929024.9| Mouse DNA sequence from clone RP23-480H10 on chromosome 2, complete sequence Length = 159617 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaagaac 344 |||||||||||||||||| |||||| Sbjct: 110278 aaggaggaggagaagaagaaagaac 110302
>emb|AL831723.8| Mouse DNA sequence from clone RP23-100C7 on chromosome 4, complete sequence Length = 171424 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 322 ggaggaggagaagaaggaaga 342 ||||||||||||||||||||| Sbjct: 150251 ggaggaggagaagaaggaaga 150231
>emb|AL669952.8| Mouse DNA sequence from clone RP23-154A15 on chromosome 4, complete sequence Length = 183213 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 ggaggaggagaagaaggaaga 342 ||||||||||||||||||||| Sbjct: 102640 ggaggaggagaagaaggaaga 102660
>emb|AL837525.5| Mouse DNA sequence from clone RP23-233N12 on chromosome 4, complete sequence Length = 15812 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 323 gaggaggagaagaaggaagaa 343 ||||||||||||||||||||| Sbjct: 1947 gaggaggagaagaaggaagaa 1927
>emb|AL671858.6| Mouse DNA sequence from clone RP23-341B14 on chromosome 4, complete sequence Length = 121969 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 323 gaggaggagaagaaggaagaa 343 ||||||||||||||||||||| Sbjct: 121916 gaggaggagaagaaggaagaa 121896
>gb|AY851302.1| Homarus americanus heat shock protein 90 (hsp90) mRNA, partial cds Length = 1008 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaagga 339 |||||||||||||||||||| Sbjct: 218 aaggaggaggagaagaagga 237
>gb|AC130283.8| Mus musculus chromosome 15, clone RP23-136E18, complete sequence Length = 180660 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggagaagaaggaa 340 |||||||||||||||||||| Sbjct: 103856 aggaggaggagaagaaggaa 103875
>gb|AC153879.1| Mus musculus BAC RP23-264C21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 182252 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaagga 339 |||||||||||||||||||| Sbjct: 20790 aaggaggaggagaagaagga 20809
>ref|NM_104136.2| Arabidopsis thaliana unknown protein AT1G52580 mRNA, complete cds Length = 1024 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 328 ggagaagaaggaagaacccgagga 351 |||||||||||| ||||||||||| Sbjct: 730 ggagaagaaggacgaacccgagga 707
>ref|NM_116307.3| Arabidopsis thaliana structural constituent of ribosome AT4G00810 transcript variant AT4G00810.1 mRNA, complete cds Length = 676 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 324 aggaggagaagaaggaagaacccg 347 |||||||||||||||| ||||||| Sbjct: 382 aggaggagaagaaggacgaacccg 405
>ref|NM_178947.2| Arabidopsis thaliana structural constituent of ribosome AT4G00810 transcript variant AT4G00810.2 mRNA, complete cds Length = 598 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 324 aggaggagaagaaggaagaacccg 347 |||||||||||||||| ||||||| Sbjct: 304 aggaggagaagaaggacgaacccg 327
>gb|AC165230.12| Mus musculus chromosome 1, clone RP23-65C14, complete sequence Length = 174156 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaagga 339 |||||||||||||||||||| Sbjct: 85701 aaggaggaggagaagaagga 85720
>gb|AC154375.2| Mus musculus BAC clone RP23-69H21 from chromosome 12, complete sequence Length = 169125 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 320 aaggaggaggagaagaaggaagaa 343 |||||||||||| ||||||||||| Sbjct: 75124 aaggaggaggaggagaaggaagaa 75147
>ref|XM_515058.1| PREDICTED: Pan troglodytes similar to KIAA0845 protein (LOC458741), mRNA Length = 3810 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 317 cccaaggaggaggagaagaaggaa 340 ||||||| |||||||||||||||| Sbjct: 3361 cccaaggtggaggagaagaaggaa 3384
>gb|AC151736.6| Mus musculus BAC clone RP23-9L16 from chromosome 8, complete sequence Length = 239812 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 gaggaggagaagaaggaaga 342 |||||||||||||||||||| Sbjct: 120279 gaggaggagaagaaggaaga 120298
>gb|AC163612.3| Mus musculus BAC clone RP23-89N5 from chromosome 16, complete sequence Length = 207953 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 aggaggagaagaaggaagaa 343 |||||||||||||||||||| Sbjct: 116481 aggaggagaagaaggaagaa 116462
>gb|AC168116.3| Mus musculus BAC clone RP24-108N24 from chromosome 1, complete sequence Length = 158847 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 aggaggagaagaaggaagaa 343 |||||||||||||||||||| Sbjct: 6858 aggaggagaagaaggaagaa 6877
>gb|AC159286.3| Mus musculus BAC clone RP23-314E22 from chromosome 14, complete sequence Length = 210984 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 aaggaggaggagaagaagga 339 |||||||||||||||||||| Sbjct: 174090 aaggaggaggagaagaagga 174071 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,702,009 Number of Sequences: 3902068 Number of extensions: 3702009 Number of successful extensions: 135648 Number of sequences better than 10.0: 689 Number of HSP's better than 10.0 without gapping: 699 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 130858 Number of HSP's gapped (non-prelim): 4510 length of query: 404 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 382 effective length of database: 17,147,199,772 effective search space: 6550230312904 effective search space used: 6550230312904 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
