ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags31l06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ZO2_HUMAN (Q9UDY2) Tight junction protein ZO-2 (Zonula occludens... 33 0.49
2ZO2_CANFA (Q95168) Tight junction protein ZO-2 (Zonula occludens... 32 1.4
3RIG_DROME (Q86BY9) Protein rigor mortis 32 1.4
4GUNC_PSEFL (P27033) Endoglucanase C precursor (EC 3.2.1.4) (Endo... 29 9.2
5YS89_CAEEL (Q09624) Hypothetical protein ZK945.9 29 9.2

>ZO2_HUMAN (Q9UDY2) Tight junction protein ZO-2 (Zonula occludens 2 protein)|
           (Zona occludens 2 protein) (Tight junction protein 2)
          Length = 1190

 Score = 33.5 bits (75), Expect = 0.49
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = -3

Query: 344 EASELGDRSCRRSHSGQPENHQYSAYRFHTNNDQIKGTP-RRSQPVIFLQERGLNPEDIQ 168
           E  ++ +    RS S +   HQYS Y +H++++++K  P  R      L   G  P   +
Sbjct: 401 EIEDISEIESNRSFSPEERRHQYSDYDYHSSSEKLKERPSSREDTPSRLSRMGATPTPFK 460

Query: 167 CAG 159
             G
Sbjct: 461 STG 463



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>ZO2_CANFA (Q95168) Tight junction protein ZO-2 (Zonula occludens 2 protein)|
           (Zona occludens 2 protein) (Tight junction protein 2)
          Length = 1174

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
 Frame = -3

Query: 344 EASELGDRSCRRSHSGQPENHQYSAYRFHTNNDQIKGTPRRSQPVIFLQER-GLNPEDIQ 168
           E  ++ +    RS S +    QYS Y +H++N+++K  P   + +     R G  P   +
Sbjct: 385 EIEDISEIESNRSFSPEERRQQYSDYDYHSSNEKLKERPNSREDMQNRWSRMGATPTPFK 444

Query: 167 CAGIQGQILG 138
             G    ++G
Sbjct: 445 SMGDIASVVG 454



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>RIG_DROME (Q86BY9) Protein rigor mortis|
          Length = 1235

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
 Frame = -3

Query: 398 STNSTAGSYPHQCWLLQMEASEL------GDRSCRRSHSGQPENHQYSAYRFHTNNDQI 240
           +TNS   SY     +L M+AS+L       +  CRRS    P NHQ +  R    ND +
Sbjct: 121 TTNSVLMSYLANGNILSMDASDLVIYCVASNTYCRRSTFISPRNHQLTMVRCSPYNDNL 179



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>GUNC_PSEFL (P27033) Endoglucanase C precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase) (Cellulase) (EGC)
           (Cellodextrinase C)
          Length = 748

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 10/33 (30%), Positives = 21/33 (63%)
 Frame = -3

Query: 248 DQIKGTPRRSQPVIFLQERGLNPEDIQCAGIQG 150
           D++  +P    P +F+Q + ++P   +CAG++G
Sbjct: 582 DRLLFSPHTYGPSVFVQRQFMDPAQTECAGLEG 614



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>YS89_CAEEL (Q09624) Hypothetical protein ZK945.9|
          Length = 3178

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -2

Query: 69 SSFSCCIPCPDSIAMFRTIFT 7
          S FSCC+ C + I +FR IFT
Sbjct: 15 SFFSCCLFCSEFIFVFRRIFT 35


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,876,991
Number of Sequences: 219361
Number of extensions: 1750428
Number of successful extensions: 4446
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4446
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5310515667
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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