Clone Information

BLAST Search Result

Clone Name	bags32a01
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	NFYB2_ARATH (Q9FGJ3) Nuclear transcription factor Y subunit B-2 ...	169	2e-42
2	NFYB3_ARATH (O23310) Nuclear transcription factor Y subunit B-3 ...	170	3e-42
3	NFYB_MAIZE (P25209) Nuclear transcription factor Y subunit B (NF...	159	5e-39
4	NFYB3_ORYSA (Q60EQ4) Nuclear transcription factor Y subunit B-3 ...	159	5e-39
5	NFYB7_ARATH (Q9SIT9) Nuclear transcription factor Y subunit B-7 ...	154	1e-37
6	NFYB1_ARATH (Q9SLG0) Nuclear transcription factor Y subunit B-1 ...	152	5e-37
7	NFYB8_ARATH (Q8VYK4) Nuclear transcription factor Y subunit B-8 ...	152	8e-37
8	NFYBA_ARATH (Q67XJ2) Nuclear transcription factor Y subunit B-10...	150	2e-36
9	NFYB2_ORYSA (Q5QMG3) Nuclear transcription factor Y subunit B-2 ...	148	9e-36
10	NFYB5_ARATH (O82248) Nuclear transcription factor Y subunit B-5 ...	142	8e-34
11	NFYB4_ORYSA (Q65XK1) Nuclear transcription factor Y subunit B-4 ...	140	2e-33
12	NFYB6_ARATH (Q84W66) Nuclear transcription factor Y subunit B-6 ...	139	5e-33
13	NFYB_RAT (P63140) Nuclear transcription factor Y subunit beta (N...	132	8e-31
14	NFYB_MOUSE (P63139) Nuclear transcription factor Y subunit beta ...	132	8e-31
15	NFYB_HUMAN (P25208) Nuclear transcription factor Y subunit beta ...	132	8e-31
16	NFYB_HORSE (Q6RG77) Nuclear transcription factor Y subunit beta ...	132	8e-31
17	NFYB_CHICK (P25207) Nuclear transcription factor Y subunit beta ...	132	8e-31
18	NFYB_PETMA (P25210) Nuclear transcription factor Y subunit beta ...	130	2e-30
19	NFYB9_ARATH (Q9SFD8) Nuclear transcription factor Y subunit B-9 ...	129	4e-30
20	NFYB4_ARATH (O04027) Nuclear transcription factor Y subunit B-4 ...	125	1e-28
21	HAP3_SCHPO (P36611) Transcriptional activator hap3	119	4e-27
22	HAP3_YEAST (P13434) Transcriptional activator HAP3 (UAS2 regulat...	111	1e-24
23	HAP3_KLULA (P40914) Transcriptional activator HAP3	110	2e-24
24	NFYB_XENLA (P25211) Nuclear transcription factor Y subunit beta ...	100	5e-21
25	NFYB1_ORYSA (Q6Z348) Nuclear transcription factor Y subunit B-1 ...	79	8e-15
26	NC2B_DROME (Q9VJQ5) Negative cofactor 2 beta (dNC2) (Down-regula...	66	6e-11
27	DR1_ARATH (P49592) Dr1 protein homolog	66	6e-11
28	DPOE3_MOUSE (Q9JKP7) DNA polymerase epsilon subunit 3 (EC 2.7.7....	63	5e-10
29	DPOE3_RAT (Q642A5) DNA polymerase epsilon subunit 3 (EC 2.7.7.7)...	63	6e-10
30	DPOE3_PONPY (Q5R4W3) DNA polymerase epsilon subunit 3 (EC 2.7.7....	63	6e-10
31	DPOE3_HUMAN (Q9NRF9) DNA polymerase epsilon subunit 3 (EC 2.7.7....	63	6e-10
32	TBAP_RAT (Q5XI68) TATA-binding protein-associated phosphoprotein...	63	6e-10
33	TBAP_MOUSE (Q91WV0) TATA-binding protein-associated phosphoprote...	63	6e-10
34	TBAP_HUMAN (Q01658) TATA-binding protein-associated phosphoprote...	63	6e-10
35	TBAP_CHICK (Q5ZMV3) TATA-binding protein-associated phosphoprote...	63	6e-10
36	DPB4_YARLI (Q6CHS6) DNA polymerase epsilon subunit D (EC 2.7.7.7...	41	0.003
37	DPB4_SCHPO (P87174) DNA polymerase epsilon subunit D (EC 2.7.7.7...	40	0.004
38	DPB4_DEBHA (Q6BIP4) DNA polymerase epsilon subunit D (EC 2.7.7.7...	37	0.047
39	HAF1_ARCFU (O29910) Probable archaeal histone A1-1	35	0.11
40	HMT1_METTH (P50483) DNA-binding protein HMt-1.1 (Archaeal histon...	32	0.89
41	H2B2_LYTPI (P06146) Histone H2B.2, sperm	32	1.2
42	DPB4_YEAST (Q04603) DNA polymerase epsilon subunit D (EC 2.7.7.7...	32	1.2
43	HAF2_ARCFU (O28779) Probable archaeal histone A1-2	32	1.2
44	DPB4_ASHGO (Q750A4) DNA polymerase epsilon subunit D (EC 2.7.7.7...	32	1.5
45	CAC1E_MOUSE (Q61290) Voltage-dependent R-type calcium channel al...	31	2.0
46	CAC1E_RABIT (Q02343) Voltage-dependent R-type calcium channel al...	31	2.0
47	CAC1E_HUMAN (Q15878) Voltage-dependent R-type calcium channel al...	31	2.0
48	CAC1E_RAT (Q07652) Voltage-dependent R-type calcium channel alph...	31	2.0
49	HFO2_METFO (P48783) Archaeal histone A2	31	2.0
50	DPB4_CANGA (Q6FXD0) DNA polymerase epsilon subunit D (EC 2.7.7.7...	31	2.6
51	HMFA_METFE (P48781) DNA-binding protein HMf-1 (Archaeal histone A)	30	3.4
52	HFO1_METFO (P48782) Archaeal histone A1	30	3.4
53	HMFB_METFE (P19267) DNA-binding protein HMf-2 (Archaeal histone B)	30	4.4
54	HFOB_METFO (P48784) Archaeal histone B	30	4.4
55	HMT2_METTH (O27731) DNA-binding protein HMt-1.2 (Archaeal histon...	30	5.8
56	PDE3B_RAT (Q63085) cGMP-inhibited 3',5'-cyclic phosphodiesterase...	30	5.8
57	PCRA_STAES (Q8CRT9) ATP-dependent DNA helicase pcrA (EC 3.6.1.-)	29	7.6
58	PCRA_STAEQ (Q5HN29) ATP-dependent DNA helicase pcrA (EC 3.6.1.-)	29	7.6
59	LAMR_PETMA (P33577) Lamprin 1.8-10 precursor (Cartilage matrix p...	29	7.6
60	MVHD_METTH (Q50781) F420-non-reducing hydrogenase iron-sulfur su...	29	9.9
61	CAC1F_HUMAN (O60840) Voltage-dependent L-type calcium channel al...	29	9.9

>NFYB2_ARATH (Q9FGJ3) Nuclear transcription factor Y subunit B-2 (AtNF-YB-2)|
           (Transcriptional activator HAP3B)
          Length = 190

 Score =  169 bits (428), Expect(2) = 2e-42
 Identities = 82/88 (93%), Positives = 86/88 (97%)
 Frame = +3

Query: 33  IANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLW 212
           IANVSRIMKKALPANAKISKDAKET+QECVSEFISF+TGEASDKCQ+EKRKTINGDDLLW
Sbjct: 34  IANVSRIMKKALPANAKISKDAKETMQECVSEFISFVTGEASDKCQKEKRKTINGDDLLW 93

Query: 213 AMTTLGFEDYVEPLKYYLHKFREIEGER 296
           AMTTLGFEDYVEPLK YL +FREIEGER
Sbjct: 94  AMTTLGFEDYVEPLKVYLQRFREIEGER 121



 Score = 22.7 bits (47), Expect(2) = 2e-42
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = +1

Query: 4  SPREQDRFL 30
          SPREQDRFL
Sbjct: 24 SPREQDRFL 32

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>NFYB3_ARATH (O23310) Nuclear transcription factor Y subunit B-3 (AtNF-YB-3)|
           (Transcriptional activator HAP3C)
          Length = 161

 Score =  170 bits (431), Expect(2) = 3e-42
 Identities = 83/88 (94%), Positives = 86/88 (97%)
 Frame = +3

Query: 33  IANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLW 212
           IANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLW
Sbjct: 28  IANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLW 87

Query: 213 AMTTLGFEDYVEPLKYYLHKFREIEGER 296
           AMTTLGFEDYVEPLK YL K+RE+EGE+
Sbjct: 88  AMTTLGFEDYVEPLKVYLQKYREVEGEK 115



 Score = 21.2 bits (43), Expect(2) = 3e-42
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +1

Query: 1  ASPREQDRFL 30
          AS REQDRFL
Sbjct: 17 ASTREQDRFL 26

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>NFYB_MAIZE (P25209) Nuclear transcription factor Y subunit B (NF-YB) (CAAT-box|
           DNA-binding protein subunit B)
          Length = 179

 Score =  159 bits (402), Expect = 5e-39
 Identities = 75/87 (86%), Positives = 82/87 (94%)
 Frame = +3

Query: 33  IANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLW 212
           IAN+SRIMKKA+PAN KI+KDAKETVQECVSEFISFIT EASDKCQREKRKTINGDDLLW
Sbjct: 38  IANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLW 97

Query: 213 AMTTLGFEDYVEPLKYYLHKFREIEGE 293
           AM TLGFEDY+EPLK YL K+RE+EG+
Sbjct: 98  AMATLGFEDYIEPLKVYLQKYREMEGD 124

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>NFYB3_ORYSA (Q60EQ4) Nuclear transcription factor Y subunit B-3 (OsNF-YB-3)|
           (Transcriptional activator HAP3B)
          Length = 185

 Score =  159 bits (402), Expect = 5e-39
 Identities = 75/87 (86%), Positives = 82/87 (94%)
 Frame = +3

Query: 33  IANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLW 212
           IAN+SRIMKKA+PAN KI+KDAKETVQECVSEFISFIT EASDKCQREKRKTINGDDLLW
Sbjct: 45  IANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLW 104

Query: 213 AMTTLGFEDYVEPLKYYLHKFREIEGE 293
           AM TLGFEDY+EPLK YL K+RE+EG+
Sbjct: 105 AMATLGFEDYIEPLKVYLQKYREMEGD 131

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>NFYB7_ARATH (Q9SIT9) Nuclear transcription factor Y subunit B-7 (AtNF-YB-7)|
          Length = 215

 Score =  154 bits (390), Expect = 1e-37
 Identities = 73/88 (82%), Positives = 80/88 (90%)
 Frame = +3

Query: 33  IANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLW 212
           IANV RIMKK LP N KISKDAKETVQECVSEFISF+TGEASDKCQREKRKTINGDD++W
Sbjct: 43  IANVGRIMKKVLPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDIIW 102

Query: 213 AMTTLGFEDYVEPLKYYLHKFREIEGER 296
           A+TTLGFEDYV PLK YL K+R+ EGE+
Sbjct: 103 AITTLGFEDYVAPLKVYLCKYRDTEGEK 130

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>NFYB1_ARATH (Q9SLG0) Nuclear transcription factor Y subunit B-1 (AtNF-YB-1)|
           (Transcriptional activator HAP3A)
          Length = 141

 Score =  152 bits (385), Expect = 5e-37
 Identities = 71/87 (81%), Positives = 80/87 (91%)
 Frame = +3

Query: 33  IANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLW 212
           IAN+SRIMKKALP N KI KDAK+TVQECVSEFISFIT EASDKCQ+EKRKT+NGDDLLW
Sbjct: 28  IANISRIMKKALPPNGKIGKDAKDTVQECVSEFISFITSEASDKCQKEKRKTVNGDDLLW 87

Query: 213 AMTTLGFEDYVEPLKYYLHKFREIEGE 293
           AM TLGFEDY+EPLK YL ++RE+EG+
Sbjct: 88  AMATLGFEDYLEPLKIYLARYRELEGD 114

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>NFYB8_ARATH (Q8VYK4) Nuclear transcription factor Y subunit B-8 (AtNF-YB-8)|
          Length = 173

 Score =  152 bits (383), Expect = 8e-37
 Identities = 71/87 (81%), Positives = 80/87 (91%)
 Frame = +3

Query: 33  IANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLW 212
           IAN+SRIMK+ LPAN KI+KDAKE VQECVSEFISF+T EASDKCQREKRKTINGDDLLW
Sbjct: 37  IANISRIMKRGLPANGKIAKDAKEIVQECVSEFISFVTSEASDKCQREKRKTINGDDLLW 96

Query: 213 AMTTLGFEDYVEPLKYYLHKFREIEGE 293
           AM TLGFEDY+EPLK YL ++RE+EG+
Sbjct: 97  AMATLGFEDYMEPLKVYLMRYREMEGD 123

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>NFYBA_ARATH (Q67XJ2) Nuclear transcription factor Y subunit B-10 (AtNF-YB-10)|
          Length = 176

 Score =  150 bits (380), Expect = 2e-36
 Identities = 69/87 (79%), Positives = 80/87 (91%)
 Frame = +3

Query: 33  IANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLW 212
           IAN+SRIMK+ LP N KI+KDAKET+QECVSEFISF+T EASDKCQREKRKTINGDDLLW
Sbjct: 36  IANISRIMKRGLPLNGKIAKDAKETMQECVSEFISFVTSEASDKCQREKRKTINGDDLLW 95

Query: 213 AMTTLGFEDYVEPLKYYLHKFREIEGE 293
           AM TLGFEDY++PLK YL ++RE+EG+
Sbjct: 96  AMATLGFEDYIDPLKVYLMRYREMEGD 122

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>NFYB2_ORYSA (Q5QMG3) Nuclear transcription factor Y subunit B-2 (OsNF-YB-2)|
           (Transcriptional activator HAP3A)
          Length = 178

 Score =  148 bits (374), Expect = 9e-36
 Identities = 69/87 (79%), Positives = 82/87 (94%)
 Frame = +3

Query: 33  IANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLW 212
           IAN+SRIMKKA+PAN KI+KDAKET+QECVSEFISF+T EASDKCQ+EKRKTING+DLL+
Sbjct: 41  IANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVTSEASDKCQKEKRKTINGEDLLF 100

Query: 213 AMTTLGFEDYVEPLKYYLHKFREIEGE 293
           AM TLGFE+YV+PLK YLHK+RE+ G+
Sbjct: 101 AMGTLGFEEYVDPLKIYLHKYREVIGD 127

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>NFYB5_ARATH (O82248) Nuclear transcription factor Y subunit B-5 (AtNF-YB-5)|
          Length = 160

 Score =  142 bits (357), Expect = 8e-34
 Identities = 64/88 (72%), Positives = 76/88 (86%)
 Frame = +3

Query: 33  IANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLW 212
           IANV RIMK  LPANAK+SK+AKET+QECVSEFISF+TGEASDKC +EKRKT+NGDD+ W
Sbjct: 58  IANVGRIMKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICW 117

Query: 213 AMTTLGFEDYVEPLKYYLHKFREIEGER 296
           AM  LGF+DY   LK YLH++R +EGE+
Sbjct: 118 AMANLGFDDYAAQLKKYLHRYRVLEGEK 145

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>NFYB4_ORYSA (Q65XK1) Nuclear transcription factor Y subunit B-4 (OsNF-YB-4)|
           (Transcriptional activator HAP3C)
          Length = 143

 Score =  140 bits (354), Expect = 2e-33
 Identities = 65/87 (74%), Positives = 77/87 (88%)
 Frame = +3

Query: 33  IANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLW 212
           IAN+ RIM++A+P N KI+KD+KE+VQECVSEFISFIT EASDKC +EKRKTINGDDL+W
Sbjct: 29  IANIGRIMRRAVPENGKIAKDSKESVQECVSEFISFITSEASDKCLKEKRKTINGDDLIW 88

Query: 213 AMTTLGFEDYVEPLKYYLHKFREIEGE 293
           +M TLGFEDYVEPLK YL  +RE EG+
Sbjct: 89  SMGTLGFEDYVEPLKLYLRLYRETEGD 115

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>NFYB6_ARATH (Q84W66) Nuclear transcription factor Y subunit B-6 (AtNF-YB-6)|
           (Protein LEAFY COTYLEDON 1-LIKE)
          Length = 234

 Score =  139 bits (350), Expect = 5e-33
 Identities = 62/88 (70%), Positives = 80/88 (90%)
 Frame = +3

Query: 33  IANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLW 212
           IANV RIM++ LPA+AKIS D+KET+QECVSE+ISFITGEA+++CQRE+RKTI  +D+LW
Sbjct: 65  IANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGEANERCQREQRKTITAEDVLW 124

Query: 213 AMTTLGFEDYVEPLKYYLHKFREIEGER 296
           AM+ LGF+DY+EPL  YLH++RE+EGER
Sbjct: 125 AMSKLGFDDYIEPLTLYLHRYRELEGER 152

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>NFYB_RAT (P63140) Nuclear transcription factor Y subunit beta (Nuclear|
           transcription factor Y subunit B) (NF-YB) (CAAT-box
           DNA-binding protein subunit B) (CCAAT-binding
           transcription factor subunit A) (CBF-A)
          Length = 207

 Score =  132 bits (331), Expect = 8e-31
 Identities = 64/89 (71%), Positives = 78/89 (87%), Gaps = 1/89 (1%)
 Frame = +3

Query: 33  IANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLW 212
           IANV+RIMK A+P   KI+KDAKE VQECVSEFISFIT EAS++C +EKRKTING+D+L+
Sbjct: 61  IANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILF 120

Query: 213 AMTTLGFEDYVEPLKYYLHKFRE-IEGER 296
           AM+TLGF+ YVEPLK YL KFRE ++GE+
Sbjct: 121 AMSTLGFDSYVEPLKLYLQKFREAMKGEK 149

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>NFYB_MOUSE (P63139) Nuclear transcription factor Y subunit beta (Nuclear|
           transcription factor Y subunit B) (NF-YB) (CAAT-box
           DNA-binding protein subunit B)
          Length = 207

 Score =  132 bits (331), Expect = 8e-31
 Identities = 64/89 (71%), Positives = 78/89 (87%), Gaps = 1/89 (1%)
 Frame = +3

Query: 33  IANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLW 212
           IANV+RIMK A+P   KI+KDAKE VQECVSEFISFIT EAS++C +EKRKTING+D+L+
Sbjct: 61  IANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILF 120

Query: 213 AMTTLGFEDYVEPLKYYLHKFRE-IEGER 296
           AM+TLGF+ YVEPLK YL KFRE ++GE+
Sbjct: 121 AMSTLGFDSYVEPLKLYLQKFREAMKGEK 149

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>NFYB_HUMAN (P25208) Nuclear transcription factor Y subunit beta (Nuclear|
           transcription factor Y subunit B) (NF-YB) (CAAT-box
           DNA-binding protein subunit B)
          Length = 207

 Score =  132 bits (331), Expect = 8e-31
 Identities = 64/89 (71%), Positives = 78/89 (87%), Gaps = 1/89 (1%)
 Frame = +3

Query: 33  IANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLW 212
           IANV+RIMK A+P   KI+KDAKE VQECVSEFISFIT EAS++C +EKRKTING+D+L+
Sbjct: 61  IANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILF 120

Query: 213 AMTTLGFEDYVEPLKYYLHKFRE-IEGER 296
           AM+TLGF+ YVEPLK YL KFRE ++GE+
Sbjct: 121 AMSTLGFDSYVEPLKLYLQKFREAMKGEK 149

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>NFYB_HORSE (Q6RG77) Nuclear transcription factor Y subunit beta (Nuclear|
           transcription factor Y subunit B) (NF-YB) (CAAT-box
           DNA-binding protein subunit B)
          Length = 207

 Score =  132 bits (331), Expect = 8e-31
 Identities = 64/89 (71%), Positives = 78/89 (87%), Gaps = 1/89 (1%)
 Frame = +3

Query: 33  IANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLW 212
           IANV+RIMK A+P   KI+KDAKE VQECVSEFISFIT EAS++C +EKRKTING+D+L+
Sbjct: 61  IANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILF 120

Query: 213 AMTTLGFEDYVEPLKYYLHKFRE-IEGER 296
           AM+TLGF+ YVEPLK YL KFRE ++GE+
Sbjct: 121 AMSTLGFDSYVEPLKLYLQKFREAMKGEK 149

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>NFYB_CHICK (P25207) Nuclear transcription factor Y subunit beta (Nuclear|
           transcription factor Y subunit B) (NF-YB) (CAAT-box
           DNA-binding protein subunit B)
          Length = 205

 Score =  132 bits (331), Expect = 8e-31
 Identities = 64/89 (71%), Positives = 78/89 (87%), Gaps = 1/89 (1%)
 Frame = +3

Query: 33  IANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLW 212
           IANV+RIMK A+P   KI+KDAKE VQECVSEFISFIT EAS++C +EKRKTING+D+L+
Sbjct: 59  IANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILF 118

Query: 213 AMTTLGFEDYVEPLKYYLHKFRE-IEGER 296
           AM+TLGF+ YVEPLK YL KFRE ++GE+
Sbjct: 119 AMSTLGFDSYVEPLKLYLQKFREAMKGEK 147

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>NFYB_PETMA (P25210) Nuclear transcription factor Y subunit beta (Nuclear|
           transcription factor Y subunit B) (NF-YB) (CAAT-box
           DNA-binding protein subunit B)
          Length = 209

 Score =  130 bits (327), Expect = 2e-30
 Identities = 62/89 (69%), Positives = 80/89 (89%), Gaps = 1/89 (1%)
 Frame = +3

Query: 33  IANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLW 212
           IANV+RIMK ++P++ KI+KDAKE VQECVSEFISFIT EAS++C +EKRKTING+D+L+
Sbjct: 62  IANVARIMKTSIPSSGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILF 121

Query: 213 AMTTLGFEDYVEPLKYYLHKFRE-IEGER 296
           AM+TLGF+ YVEPLK YL K+RE ++GE+
Sbjct: 122 AMSTLGFDSYVEPLKQYLQKYRESMKGEK 150

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>NFYB9_ARATH (Q9SFD8) Nuclear transcription factor Y subunit B-9 (AtNF-YB-9)|
           (Protein LEAFY COTYLEDON 1)
          Length = 208

 Score =  129 bits (325), Expect = 4e-30
 Identities = 57/88 (64%), Positives = 79/88 (89%)
 Frame = +3

Query: 33  IANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLW 212
           IANV RIM+K LP++AKIS DAKET+QECVSE+ISF+TGEA+++CQRE+RKTI  +D+LW
Sbjct: 36  IANVIRIMRKTLPSHAKISDDAKETIQECVSEYISFVTGEANERCQREQRKTITAEDILW 95

Query: 213 AMTTLGFEDYVEPLKYYLHKFREIEGER 296
           AM+ LGF++YV+PL  +++++REIE +R
Sbjct: 96  AMSKLGFDNYVDPLTVFINRYREIETDR 123

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>NFYB4_ARATH (O04027) Nuclear transcription factor Y subunit B-4 (AtNF-YB-4)|
           (Transcriptional activator HAP3D)
          Length = 139

 Score =  125 bits (313), Expect = 1e-28
 Identities = 56/88 (63%), Positives = 74/88 (84%)
 Frame = +3

Query: 33  IANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLW 212
           IANV R+MK+ LP+NAKISK+AK+TVQEC +EFISF+T EAS+KC RE RKT+NGDD+ W
Sbjct: 10  IANVGRLMKQILPSNAKISKEAKQTVQECATEFISFVTCEASEKCHRENRKTVNGDDIWW 69

Query: 213 AMTTLGFEDYVEPLKYYLHKFREIEGER 296
           A++TLG ++Y + +  +LHK+RE E ER
Sbjct: 70  ALSTLGLDNYADAVGRHLHKYREAERER 97

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>HAP3_SCHPO (P36611) Transcriptional activator hap3|
          Length = 116

 Score =  119 bits (299), Expect = 4e-27
 Identities = 58/83 (69%), Positives = 71/83 (85%)
 Frame = +3

Query: 33  IANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLW 212
           IANV+RIMK ALP NAKISK+AK+ VQ+CVSEFISF+TGEAS++C +EKRKTI G+D+L 
Sbjct: 14  IANVARIMKSALPENAKISKEAKDCVQDCVSEFISFVTGEASEQCTQEKRKTITGEDVLL 73

Query: 213 AMTTLGFEDYVEPLKYYLHKFRE 281
           A+ TLGFE+Y E LK  L K+RE
Sbjct: 74  ALNTLGFENYAEVLKISLTKYRE 96

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>HAP3_YEAST (P13434) Transcriptional activator HAP3 (UAS2 regulatory protein A)|
          Length = 144

 Score =  111 bits (278), Expect = 1e-24
 Identities = 52/83 (62%), Positives = 67/83 (80%)
 Frame = +3

Query: 33  IANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLW 212
           I NV+R+MK  LP +AK+SKDAKE +QECVSE ISF+T EASD+C  +KRKTING+D+L 
Sbjct: 44  INNVARLMKNTLPPSAKVSKDAKECMQECVSELISFVTSEASDRCAADKRKTINGEDILI 103

Query: 213 AMTTLGFEDYVEPLKYYLHKFRE 281
           ++  LGFE+Y E LK YL K+R+
Sbjct: 104 SLHALGFENYAEVLKIYLAKYRQ 126

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>HAP3_KLULA (P40914) Transcriptional activator HAP3|
          Length = 205

 Score =  110 bits (276), Expect = 2e-24
 Identities = 52/83 (62%), Positives = 65/83 (78%)
 Frame = +3

Query: 33  IANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLW 212
           I NV+R+MK  LPA  K+SKDAKE +QECVSEFISF+T EA D+C   KRKTING+D+L 
Sbjct: 29  INNVARLMKNTLPATTKVSKDAKECMQECVSEFISFVTSEACDRCTSGKRKTINGEDILL 88

Query: 213 AMTTLGFEDYVEPLKYYLHKFRE 281
           ++  LGFE+Y E LK YL K+R+
Sbjct: 89  SLHALGFENYAEVLKIYLAKYRQ 111

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>NFYB_XENLA (P25211) Nuclear transcription factor Y subunit beta (Nuclear|
           transcription factor Y subunit B) (NF-YB) (CAAT-box
           DNA-binding protein subunit B) (Fragment)
          Length = 122

 Score = 99.8 bits (247), Expect = 5e-21
 Identities = 47/64 (73%), Positives = 58/64 (90%), Gaps = 1/64 (1%)
 Frame = +3

Query: 108 VQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKYYLHKFRE-I 284
           VQECVSEFISFIT EAS++C +EKRKTING+D+L+AM+TLGF+ YVEPLK YL KFRE +
Sbjct: 1   VQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAM 60

Query: 285 EGER 296
           +GE+
Sbjct: 61  KGEK 64

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>NFYB1_ORYSA (Q6Z348) Nuclear transcription factor Y subunit B-1 (OsNF-YB-1)|
           (CCAAT-binding transcription factor subunit NF-YB1)
          Length = 186

 Score = 79.0 bits (193), Expect = 8e-15
 Identities = 36/85 (42%), Positives = 54/85 (63%)
 Frame = +3

Query: 33  IANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLW 212
           +AN+ R++KK LP  AKI   AK    +C  EF+ F+  EAS+K + E R+T+  +D L 
Sbjct: 36  MANLVRLIKKVLPGKAKIGGAAKGLTHDCAVEFVGFVGDEASEKAKAEHRRTVAPEDYLG 95

Query: 213 AMTTLGFEDYVEPLKYYLHKFREIE 287
           +   LGF+ YV+P+  Y+H +RE E
Sbjct: 96  SFGDLGFDRYVDPMDAYIHGYREFE 120

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>NC2B_DROME (Q9VJQ5) Negative cofactor 2 beta (dNC2) (Down-regulator of|
           transcription 1)
          Length = 183

 Score = 66.2 bits (160), Expect = 6e-11
 Identities = 29/87 (33%), Positives = 55/87 (63%)
 Frame = +3

Query: 36  ANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWA 215
           A++++I+K+ +P   +++ +++E +  C SEFI  I+ EA++ C    +KTIN + +L A
Sbjct: 23  ASINKIIKELVPT-VRVANESRELILNCCSEFIHLISSEANEVCNMRNKKTINAEHVLEA 81

Query: 216 MTTLGFEDYVEPLKYYLHKFREIEGER 296
           +  LGF DY +  +  LH  +E+  +R
Sbjct: 82  LERLGFHDYKQEAEAVLHDCKEVAAKR 108

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>DR1_ARATH (P49592) Dr1 protein homolog|
          Length = 159

 Score = 66.2 bits (160), Expect = 6e-11
 Identities = 36/130 (27%), Positives = 68/130 (52%), Gaps = 2/130 (1%)
 Frame = +3

Query: 36  ANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWA 215
           A +++I+K+ LP + ++++DA++ + EC  EFI+ ++ E++D C +E ++TI  + +L A
Sbjct: 19  ATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNDVCNKEDKRTIAPEHVLKA 78

Query: 216 MTTLGFEDYVEPL--KYYLHKFREIEGERXXXXXXXXXXXXXXXHLPEMPRSNNAGGYAE 389
           +  LGF +Y+E +   Y  HK+  ++  +                  E  R   A   A 
Sbjct: 79  LQVLGFGEYIEEVYAAYEQHKYETMQDTQRSVKWNPGAQMTEEEAAAEQQRM-FAEARAR 137

Query: 390 YGSGATVPAP 419
              G +VP P
Sbjct: 138 MNGGVSVPQP 147

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>DPOE3_MOUSE (Q9JKP7) DNA polymerase epsilon subunit 3 (EC 2.7.7.7) (DNA|
           polymerase II subunit 3) (DNA polymerase epsilon subunit
           p17) (YB-like protein 1) (YBL1) (NF-YB-like protein)
          Length = 145

 Score = 63.2 bits (152), Expect = 5e-10
 Identities = 31/84 (36%), Positives = 50/84 (59%)
 Frame = +3

Query: 36  ANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWA 215
           A ++RI+K+ALP    ISK+A+  +    S F+ + T  A++   + KRKT+N  D+L A
Sbjct: 13  AVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDVLSA 72

Query: 216 MTTLGFEDYVEPLKYYLHKFREIE 287
           M  + F+ ++ PLK  L  +R  E
Sbjct: 73  MEEMEFQRFITPLKEALEAYRRDE 96

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>DPOE3_RAT (Q642A5) DNA polymerase epsilon subunit 3 (EC 2.7.7.7) (DNA|
           polymerase II subunit 3) (DNA polymerase epsilon subunit
           p17)
          Length = 145

 Score = 62.8 bits (151), Expect = 6e-10
 Identities = 31/81 (38%), Positives = 49/81 (60%)
 Frame = +3

Query: 36  ANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWA 215
           A ++RI+K+ALP    ISK+A+  +    S F+ + T  A++   + KRKT+N  D+L A
Sbjct: 13  AVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDVLSA 72

Query: 216 MTTLGFEDYVEPLKYYLHKFR 278
           M  + F+ +V PLK  L  +R
Sbjct: 73  MEEMEFQRFVTPLKEALEAYR 93

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>DPOE3_PONPY (Q5R4W3) DNA polymerase epsilon subunit 3 (EC 2.7.7.7) (DNA|
           polymerase II subunit 3) (DNA polymerase epsilon subunit
           p17)
          Length = 147

 Score = 62.8 bits (151), Expect = 6e-10
 Identities = 31/81 (38%), Positives = 49/81 (60%)
 Frame = +3

Query: 36  ANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWA 215
           A ++RI+K+ALP    ISK+A+  +    S F+ + T  A++   + KRKT+N  D+L A
Sbjct: 13  AVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDVLSA 72

Query: 216 MTTLGFEDYVEPLKYYLHKFR 278
           M  + F+ +V PLK  L  +R
Sbjct: 73  MEEMEFQRFVTPLKEALEAYR 93

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>DPOE3_HUMAN (Q9NRF9) DNA polymerase epsilon subunit 3 (EC 2.7.7.7) (DNA|
           polymerase II subunit 3) (DNA polymerase epsilon subunit
           p17) (Chromatin accessibility complex 17) (HuCHRAC17)
           (CHRAC-17) (Arsenic-transactivated protein) (AsTP)
          Length = 147

 Score = 62.8 bits (151), Expect = 6e-10
 Identities = 31/81 (38%), Positives = 49/81 (60%)
 Frame = +3

Query: 36  ANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWA 215
           A ++RI+K+ALP    ISK+A+  +    S F+ + T  A++   + KRKT+N  D+L A
Sbjct: 13  AVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDVLSA 72

Query: 216 MTTLGFEDYVEPLKYYLHKFR 278
           M  + F+ +V PLK  L  +R
Sbjct: 73  MEEMEFQRFVTPLKEALEAYR 93

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>TBAP_RAT (Q5XI68) TATA-binding protein-associated phosphoprotein|
           (Down-regulator of transcription 1) (Negative cofactor 2
           beta) (NC2 beta)
          Length = 176

 Score = 62.8 bits (151), Expect = 6e-10
 Identities = 28/87 (32%), Positives = 57/87 (65%)
 Frame = +3

Query: 36  ANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWA 215
           A +++++K+ LP N +++ DA+E V  C +EFI  I+ EA++ C + ++KTI+ + ++ A
Sbjct: 16  AAINKMIKETLP-NVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTISPEHVIQA 74

Query: 216 MTTLGFEDYVEPLKYYLHKFREIEGER 296
           + +LGF  Y+  +K  L + + +  +R
Sbjct: 75  LESLGFGSYISEVKEVLQECKTVALKR 101

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>TBAP_MOUSE (Q91WV0) TATA-binding protein-associated phosphoprotein|
           (Down-regulator of transcription 1) (Negative cofactor 2
           beta) (NC2 beta)
          Length = 176

 Score = 62.8 bits (151), Expect = 6e-10
 Identities = 28/87 (32%), Positives = 57/87 (65%)
 Frame = +3

Query: 36  ANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWA 215
           A +++++K+ LP N +++ DA+E V  C +EFI  I+ EA++ C + ++KTI+ + ++ A
Sbjct: 16  AAINKMIKETLP-NVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTISPEHVIQA 74

Query: 216 MTTLGFEDYVEPLKYYLHKFREIEGER 296
           + +LGF  Y+  +K  L + + +  +R
Sbjct: 75  LESLGFGSYISEVKEVLQECKTVALKR 101

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>TBAP_HUMAN (Q01658) TATA-binding protein-associated phosphoprotein|
           (Down-regulator of transcription 1) (Dr1 protein)
           (Negative cofactor 2 beta) (NC2 beta)
          Length = 176

 Score = 62.8 bits (151), Expect = 6e-10
 Identities = 28/87 (32%), Positives = 57/87 (65%)
 Frame = +3

Query: 36  ANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWA 215
           A +++++K+ LP N +++ DA+E V  C +EFI  I+ EA++ C + ++KTI+ + ++ A
Sbjct: 16  AAINKMIKETLP-NVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTISPEHVIQA 74

Query: 216 MTTLGFEDYVEPLKYYLHKFREIEGER 296
           + +LGF  Y+  +K  L + + +  +R
Sbjct: 75  LESLGFGSYISEVKEVLQECKTVALKR 101

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>TBAP_CHICK (Q5ZMV3) TATA-binding protein-associated phosphoprotein|
           (Down-regulator of transcription 1)
          Length = 176

 Score = 62.8 bits (151), Expect = 6e-10
 Identities = 28/87 (32%), Positives = 57/87 (65%)
 Frame = +3

Query: 36  ANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWA 215
           A +++++K+ LP N +++ DA+E V  C +EFI  I+ EA++ C + ++KTI+ + ++ A
Sbjct: 16  AAINKMIKETLP-NVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTISPEHVIQA 74

Query: 216 MTTLGFEDYVEPLKYYLHKFREIEGER 296
           + +LGF  Y+  +K  L + + +  +R
Sbjct: 75  LESLGFGSYISEVKEVLQECKTVALKR 101

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>DPB4_YARLI (Q6CHS6) DNA polymerase epsilon subunit D (EC 2.7.7.7) (DNA|
           polymerase II subunit D)
          Length = 163

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 20/87 (22%), Positives = 42/87 (48%)
 Frame = +3

Query: 36  ANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWA 215
           + +  + K+ LP +A ISKDA   +Q   + F+S++    +   +   RK I   D+  A
Sbjct: 40  STIKNLAKETLPDDAIISKDALTAIQRAATLFVSYMASHGNASAEAGGRKKITPQDVFVA 99

Query: 216 MTTLGFEDYVEPLKYYLHKFREIEGER 296
           +  +    +V  +   +++F +   +R
Sbjct: 100 LKDVDLAQFVPSVTQSVNEFEQEVAQR 126

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>DPB4_SCHPO (P87174) DNA polymerase epsilon subunit D (EC 2.7.7.7) (DNA|
           polymerase II subunit D)
          Length = 210

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 18/78 (23%), Positives = 41/78 (52%)
 Frame = +3

Query: 42  VSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMT 221
           + R++K  LP  + + K+A + +    + F+SF+T  + +      RK +   D+L A+ 
Sbjct: 22  IMRLVKGVLPEKSLVQKEALKAMINSATLFVSFLTSASGEIATNNNRKILMPQDVLNALD 81

Query: 222 TLGFEDYVEPLKYYLHKF 275
            + + ++ + LK +L  +
Sbjct: 82  EIEYPEFSKTLKKHLEAY 99

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>DPB4_DEBHA (Q6BIP4) DNA polymerase epsilon subunit D (EC 2.7.7.7) (DNA|
           polymerase II subunit D)
          Length = 247

 Score = 36.6 bits (83), Expect = 0.047
 Identities = 20/68 (29%), Positives = 35/68 (51%)
 Frame = +3

Query: 72  ANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEP 251
           +N  ++KD+   +Q   + F+S +  +A    + E RKTIN  D+L A+    F  ++  
Sbjct: 53  SNMILAKDSMIALQRSSTVFVSHLMFQARQISKDEGRKTINAQDILSALEKAEFSGFIPE 112

Query: 252 LKYYLHKF 275
           +K  L  F
Sbjct: 113 VKQKLSVF 120

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>HAF1_ARCFU (O29910) Probable archaeal histone A1-1|
          Length = 72

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 19/65 (29%), Positives = 38/65 (58%)
 Frame = +3

Query: 33  IANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLW 212
           +A V R+++KA    +++S+DAK  + + + E+   I  +A++  +   RKT+  DD+  
Sbjct: 10  LAPVERLLRKA--GASRVSEDAKVELAKAIEEYAMQIGKKAAELAKHAGRKTVKVDDIKL 67

Query: 213 AMTTL 227
           A+  L
Sbjct: 68  ALREL 72

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>HMT1_METTH (P50483) DNA-binding protein HMt-1.1 (Archaeal histone A1)|
          Length = 67

 Score = 32.3 bits (72), Expect = 0.89
 Identities = 22/65 (33%), Positives = 33/65 (50%)
 Frame = +3

Query: 33  IANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLW 212
           IA V RI+K A     +IS DAKE + + + E    I+ +A +  +   RKT+   D+  
Sbjct: 5   IAPVGRIIKNA--GAQRISDDAKEALAKALEEMGEEISRKAVELAKHAGRKTVKATDIEM 62

Query: 213 AMTTL 227
           A   L
Sbjct: 63  AAKQL 67

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>H2B2_LYTPI (P06146) Histone H2B.2, sperm|
          Length = 142

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 18/62 (29%), Positives = 32/62 (51%)
 Frame = +3

Query: 42  VSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMT 221
           + R++K+  P +  IS      +   V++    I GEAS  CQ  +R+TI+  ++  A+ 
Sbjct: 58  IYRVLKQVHP-DTGISSRGMSVMNSFVNDVFERIAGEASRLCQANRRRTISSREIQTAVR 116

Query: 222 TL 227
            L
Sbjct: 117 LL 118

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>DPB4_YEAST (Q04603) DNA polymerase epsilon subunit D (EC 2.7.7.7) (DNA|
           polymerase II subunit D)
          Length = 196

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 20/92 (21%), Positives = 45/92 (48%)
 Frame = +3

Query: 21  PLPAIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGD 200
           P   I N++R + +       I+KDA   +Q   + F++ +   A +  + + +K+ + D
Sbjct: 34  PKSTIVNLAREVPQQSGKKLLINKDASLALQRGATVFVNHLLLFAREIAKSQDKKSCSVD 93

Query: 201 DLLWAMTTLGFEDYVEPLKYYLHKFREIEGER 296
           D+L A+  +G      P++  L +++    +R
Sbjct: 94  DVLSALDHIGHSALKGPVRDKLDEYQAAVEQR 125

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>HAF2_ARCFU (O28779) Probable archaeal histone A1-2|
          Length = 67

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 17/63 (26%), Positives = 35/63 (55%)
 Frame = +3

Query: 33  IANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLW 212
           +A V R+++KA     ++S DA E + E + ++   +  +A +  +   RKT+  DD+  
Sbjct: 6   MAPVDRLIRKA--GAERVSADAVEKMVEVLEDYAITVAKKAVEIAKHSGRKTVTADDIKL 63

Query: 213 AMT 221
           A++
Sbjct: 64  ALS 66

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>DPB4_ASHGO (Q750A4) DNA polymerase epsilon subunit D (EC 2.7.7.7) (DNA|
           polymerase II subunit D)
          Length = 204

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = +3

Query: 84  ISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDY 242
           +SKDA   +Q   + F++ +   A    Q   RK+ +G+D+L A+  +G   +
Sbjct: 100 LSKDASLALQRSSTVFVNHLLMHARQIAQSNDRKSCSGEDVLKALDQIGLAGF 152

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>CAC1E_MOUSE (Q61290) Voltage-dependent R-type calcium channel alpha-1E subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.3)
            (Calcium channel, L type, alpha-1 polypeptide, isoform 6)
            (Brain calcium channel II) (BII)
          Length = 2272

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +3

Query: 96   AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTL 227
            +K+T +EC+  ++     +   K +  KR   + D+++WA+ TL
Sbjct: 1325 SKDTEKECIGNYVDHEKNKMEVKGREWKRHEFHYDNIIWALLTL 1368

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>CAC1E_RABIT (Q02343) Voltage-dependent R-type calcium channel alpha-1E subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.3)
            (Calcium channel, L type, alpha-1 polypeptide, isoform 6)
            (Brain calcium channel II) (BII)
          Length = 2259

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +3

Query: 96   AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTL 227
            +K+T +EC+  ++     +   K +  KR   + D+++WA+ TL
Sbjct: 1312 SKDTEKECIGNYVDHEKNKMEVKGREWKRHEFHYDNIIWALLTL 1355

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>CAC1E_HUMAN (Q15878) Voltage-dependent R-type calcium channel alpha-1E subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.3)
            (Calcium channel, L type, alpha-1 polypeptide, isoform 6)
            (Brain calcium channel II) (BII)
          Length = 2312

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +3

Query: 96   AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTL 227
            +K+T +EC+  ++     +   K +  KR   + D+++WA+ TL
Sbjct: 1321 SKDTEKECIGNYVDHEKNKMEVKGREWKRHEFHYDNIIWALLTL 1364

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>CAC1E_RAT (Q07652) Voltage-dependent R-type calcium channel alpha-1E subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.3)
            (Calcium channel, L type, alpha-1 polypeptide, isoform 6)
            (RBE-II) (RBE2) (Brain calcium channel II) (BII)
          Length = 2222

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +3

Query: 96   AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTL 227
            +K+T +EC+  ++     +   K +  KR   + D+++WA+ TL
Sbjct: 1274 SKDTEKECIGNYVDHEKNKMEVKGREWKRHEFHYDNIIWALLTL 1317

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>HFO2_METFO (P48783) Archaeal histone A2|
          Length = 67

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 20/62 (32%), Positives = 33/62 (53%)
 Frame = +3

Query: 33  IANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLW 212
           IA V RI+K A     +IS DAKE + + + E    +  +A +  +   RKT+  +D+  
Sbjct: 5   IAPVGRIIKNA--GAQRISDDAKEALAKALEENGEELAKKAVELAKHAGRKTVKAEDIEM 62

Query: 213 AM 218
           A+
Sbjct: 63  AV 64

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>DPB4_CANGA (Q6FXD0) DNA polymerase epsilon subunit D (EC 2.7.7.7) (DNA|
           polymerase II subunit D)
          Length = 191

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 11/70 (15%)
 Frame = +3

Query: 84  ISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLG----------- 230
           ++KDA   +Q   + F++ +   A +  + + R++ N DD+L A+  +G           
Sbjct: 74  VTKDASMALQHSATVFVNHLLMYARELAKEQDRRSCNVDDILNALEHMGHPGLKPLVANR 133

Query: 231 FEDYVEPLKY 260
            +DY E L++
Sbjct: 134 LDDYQEALEW 143

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>HMFA_METFE (P48781) DNA-binding protein HMf-1 (Archaeal histone A)|
          Length = 69

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 21/63 (33%), Positives = 32/63 (50%)
 Frame = +3

Query: 18  GPLPAIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTING 197
           G LP IA + RI+K A     ++S DA+  + + + E    I  EA    +   RKTI  
Sbjct: 2   GELP-IAPIGRIIKNA--GAERVSDDARIALAKVLEEMGEEIASEAVKLAKHAGRKTIKA 58

Query: 198 DDL 206
           +D+
Sbjct: 59  EDI 61

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>HFO1_METFO (P48782) Archaeal histone A1|
          Length = 67

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 19/62 (30%), Positives = 31/62 (50%)
 Frame = +3

Query: 33  IANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLW 212
           IA V RI+K A     ++S DA++ + + + E    I  EA    +   RKT+   D+  
Sbjct: 5   IAPVGRIIKNA--GAPRVSDDARDALAKVLEEMGEGIAAEAVKLAKHAGRKTVKASDIEM 62

Query: 213 AM 218
           A+
Sbjct: 63  AV 64

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>HMFB_METFE (P19267) DNA-binding protein HMf-2 (Archaeal histone B)|
          Length = 69

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 19/58 (32%), Positives = 30/58 (51%)
 Frame = +3

Query: 33  IANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDL 206
           IA + RI+K A     ++S DA+ T+ + + E    I  EA    +   RKTI  +D+
Sbjct: 5   IAPIGRIIKDA--GAERVSDDARITLAKILEEMGRDIASEAIKLARHAGRKTIKAEDI 60

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>HFOB_METFO (P48784) Archaeal histone B|
          Length = 67

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 20/65 (30%), Positives = 32/65 (49%)
 Frame = +3

Query: 33  IANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLW 212
           IA + RI+K A     ++S DA+E + + + E    I  EA    +   RKT+   D+  
Sbjct: 5   IAPIGRIIKNA--GAERVSDDAREALAKALEEKGETIATEAVKLAKHAGRKTVKASDVEL 62

Query: 213 AMTTL 227
           A+  L
Sbjct: 63  AVKRL 67

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>HMT2_METTH (O27731) DNA-binding protein HMt-1.2 (Archaeal histone A2)|
          Length = 67

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 20/58 (34%), Positives = 29/58 (50%)
 Frame = +3

Query: 33  IANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDL 206
           IA V RI+K A     +IS DA+E + + + E    I  EA    +   RKT+   D+
Sbjct: 5   IAPVGRIIKNA--GAQRISDDAREALAKILEEKGEEIAKEAVKLAKHAGRKTVKASDI 60

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>PDE3B_RAT (Q63085) cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC|
           3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase B)
           (CGI-PDE B) (CGIPDE1)
          Length = 1108

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -2

Query: 515 KGSGEALCSSSEHSLLLQLAACRGKAHHHHASRGGDGGS 399
           + S  +LCSS  H +L  ++ C      HH  + G+  S
Sbjct: 554 RNSDSSLCSSCGHQILKYVSTCEPDGTDHHNEKSGEEDS 592

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>PCRA_STAES (Q8CRT9) ATP-dependent DNA helicase pcrA (EC 3.6.1.-)|
          Length = 729

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
 Frame = +3

Query: 72  ANAKISKDAKETVQECVSEFISFITGEASDKCQRE--KRKTINGDDLLWAMTTLG-FEDY 242
           +N K      E  Q+  ++F S +        QR+  + + ++ DDL+  MTT+  FE  
Sbjct: 145 SNLKNELKTPEDAQKEANDFHSQMVATVYKGYQRQLSRNEALDFDDLI--MTTINLFERV 202

Query: 243 VEPLKYYLHKFREI 284
            E L+YY +KF+ I
Sbjct: 203 PETLEYYQNKFQYI 216

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>PCRA_STAEQ (Q5HN29) ATP-dependent DNA helicase pcrA (EC 3.6.1.-)|
          Length = 729

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
 Frame = +3

Query: 72  ANAKISKDAKETVQECVSEFISFITGEASDKCQRE--KRKTINGDDLLWAMTTLG-FEDY 242
           +N K      E  Q+  ++F S +        QR+  + + ++ DDL+  MTT+  FE  
Sbjct: 145 SNLKNELKTPEDAQKEANDFHSQMVATVYKGYQRQLSRNEALDFDDLI--MTTINLFERV 202

Query: 243 VEPLKYYLHKFREI 284
            E L+YY +KF+ I
Sbjct: 203 PETLEYYQNKFQYI 216

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>LAMR_PETMA (P33577) Lamprin 1.8-10 precursor (Cartilage matrix protein)|
          Length = 119

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = -2

Query: 455 ACRGKAHHHHASRGGDGGSAAVLGVTAGIVAP 360
           A  G A+ HHA+ GG G     LG+ AG+VAP
Sbjct: 73  AALGGAYTHHAALGGLGYP---LGIGAGVVAP 101

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>MVHD_METTH (Q50781) F420-non-reducing hydrogenase iron-sulfur subunit D (EC|
           1.12.99.-) (Methyl viologen-reducing hydrogenase delta
           subunit) (MVH subunit D)
          Length = 140

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = -2

Query: 107 RLLGVLAD-LGVGRERLLHDPADVGDGRK 24
           RL+  LAD LG+GRER+ HD     +G K
Sbjct: 85  RLIYKLADELGIGRERIHHDWISASEGEK 113

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>CAC1F_HUMAN (O60840) Voltage-dependent L-type calcium channel alpha-1F subunit|
            (Voltage-gated calcium channel alpha subunit Cav1.4)
          Length = 1966

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = +3

Query: 93   DAKETVQECVSEFISFITGEASDKCQREK---RKTINGDDLLWAMTTL 227
            +AK T QEC   F+ +  G+ S    RE+       N D++L AM  L
Sbjct: 1021 EAKHTPQECKGSFLVYPDGDVSRPLVRERLWVNSDFNFDNVLSAMMAL 1068


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,918,824
Number of Sequences: 219361
Number of extensions: 941636
Number of successful extensions: 3007
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 2888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2994
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4373119116
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result