ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags31k17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT018083.1| Zea mays clone EL01N0552A10.c mRNA sequence 240 4e-60
2gb|AY109647.1| Zea mays CL5260_1 mRNA sequence 240 4e-60
3ref|NM_193086.2| Oryza sativa (japonica cultivar-group), mRNA 180 3e-42
4dbj|AK061633.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 3e-42
5dbj|AK120972.1| Oryza sativa (japonica cultivar-group) cDNA clon... 178 1e-41
6dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 100 9e-18
7dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic D... 100 9e-18
8dbj|AK120292.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
9dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
10dbj|AP004997.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
11dbj|AP004799.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
12ref|NM_123971.1| Arabidopsis thaliana unknown protein AT5G46030 ... 48 0.030
13gb|BT006515.1| Arabidopsis thaliana At5g46030 gene, complete cds 48 0.030
14emb|BX833577.1|CNS0A1VS Arabidopsis thaliana Full-length cDNA Co... 48 0.030
15gb|AY085452.1| Arabidopsis thaliana clone 15222 mRNA, complete s... 48 0.030
16dbj|AB006698.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 48 0.030
17gb|BT002010.1| Arabidopsis thaliana putative protein (At5g46030)... 48 0.030
18gb|AC022743.7| Homo sapiens chromosome 18, clone RP11-789C7, com... 44 0.46
19gb|AC079145.4| Homo sapiens BAC clone RP11-42N12 from 2, complet... 44 0.46
20gb|AF287263.1|AF287263 Mus musculus ATP-binding cassette 1, sub-... 42 1.8
21dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
22emb|BX834003.1|CNS0A1VY Arabidopsis thaliana Full-length cDNA Co... 42 1.8
23emb|BX830337.1|CNS0A1YT Arabidopsis thaliana Full-length cDNA Co... 42 1.8
24dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
25emb|AL772397.3| Mouse DNA sequence from clone RP23-95M14 on chro... 42 1.8
26ref|NM_119739.3| Arabidopsis thaliana unknown protein AT4G35730 ... 40 7.2
27ref|NM_101213.2| Arabidopsis thaliana sulfotransferase AT1G13430... 40 7.2
28ref|XM_633714.1| Dictyostelium discoideum hypothetical protein (... 40 7.2
29gb|AC168206.7| Mus musculus chromosome 1, clone RP23-17B20, comp... 40 7.2
30ref|XM_478424.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.2
31gb|AC099582.7| Mus musculus chromosome 1, clone RP23-188D7, comp... 40 7.2
32gb|AC115880.11| Mus musculus chromosome 9, clone RP24-365N15, co... 40 7.2
33emb|CR450692.5| Zebrafish DNA sequence from clone CH211-198J13 i... 40 7.2
34emb|AL161588.2|ATCHRIV84 Arabidopsis thaliana DNA chromosome 4, ... 40 7.2
35emb|AL161587.2|ATCHRIV83 Arabidopsis thaliana DNA chromosome 4, ... 40 7.2
36emb|AL031135.1|ATF8D20 Arabidopsis thaliana DNA chromosome 4, BA... 40 7.2
37gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 7.2
38ref|XM_689612.1| PREDICTED: Danio rerio similar to mastermind-li... 40 7.2
39gb|BT006116.1| Arabidopsis thaliana clone U51132 putative steroi... 40 7.2
40gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 7.2
41gb|AC011810.8|AC011810 Arabidopsis thaliana chromosome I BAC T6J... 40 7.2
42gb|AF250324.1|AF250324 Homo sapiens chromosome 4q35 BAC clones R... 40 7.2
43gb|AC027134.4|AC027134 Arabidopsis thaliana chromosome I BAC F13... 40 7.2
44emb|BX649639.4| Zebrafish DNA sequence from clone CH211-102G22 i... 40 7.2
45dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
46dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
47dbj|AK118984.1| Arabidopsis thaliana At1g13430 mRNA for unknown ... 40 7.2
48dbj|AK121812.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.2
49emb|BX469908.10| Zebrafish DNA sequence from clone DKEY-249P7 in... 40 7.2 
>gb|BT018083.1| Zea mays clone EL01N0552A10.c mRNA sequence
          Length = 875

 Score =  240 bits (121), Expect = 4e-60
 Identities = 208/237 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaagtcagctgctaagccaccccctaagaagcggatggacaagctcgacacggtcttttc 60
           ||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||
Sbjct: 345 aaagtcagctgctaagccacctcctaagaagcggatggacaagcttgacactgtcttttc 404

                                                                       
Query: 61  ctgcccgttctgcaaccatgggagcagcgttgaatgccgaattgatatgaagaatctgat 120
           |||||| ||||||||||| ||||| || ||||| ||||||||||| ||||||||||||||
Sbjct: 405 ctgcccattctgcaaccacgggagtagtgttgagtgccgaattgacatgaagaatctgat 464

                                                                       
Query: 121 tggtgaggcgaattgtcgaatctgccaggaaagcttcagcaccaccataaatgcgctgac 180
           ||| || ||   |||| ||||||| ||||||| ||||||||| ||  | ||||| || ||
Sbjct: 465 tggcgaagcatcttgtagaatctgtcaggaaaacttcagcacaactgttaatgcactcac 524

                                                                    
Query: 181 tgagcctattgatatatacagcgaatggatcgatgagtgcgagcgcgtcaacgctgt 237
           |||||||||||||||||| || |||||||| |||||||| ||||| |||||| ||||
Sbjct: 525 tgagcctattgatatatatagtgaatggattgatgagtgtgagcgtgtcaacactgt 581
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>gb|AY109647.1| Zea mays CL5260_1 mRNA sequence
          Length = 1314

 Score =  240 bits (121), Expect = 4e-60
 Identities = 208/237 (87%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaagtcagctgctaagccaccccctaagaagcggatggacaagctcgacacggtcttttc 60
            ||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||
Sbjct: 1048 aaagtcagctgctaagccacctcctaagaagcggatggacaagcttgacactgtcttttc 989

                                                                        
Query: 61   ctgcccgttctgcaaccatgggagcagcgttgaatgccgaattgatatgaagaatctgat 120
            |||||| ||||||||||| ||||| || ||||| ||||||||||| ||||||||||||||
Sbjct: 988  ctgcccattctgcaaccacgggagtagtgttgagtgccgaattgacatgaagaatctgat 929

                                                                        
Query: 121  tggtgaggcgaattgtcgaatctgccaggaaagcttcagcaccaccataaatgcgctgac 180
            ||| || ||   |||| ||||||| ||||||| ||||||||| ||  | ||||| || ||
Sbjct: 928  tggcgaagcatcttgtagaatctgtcaggaaaacttcagcacaactgttaatgcactcac 869

                                                                     
Query: 181  tgagcctattgatatatacagcgaatggatcgatgagtgcgagcgcgtcaacgctgt 237
            |||||||||||||||||| || |||||||| |||||||| ||||| |||||| ||||
Sbjct: 868  tgagcctattgatatatatagtgaatggattgatgagtgtgagcgtgtcaacactgt 812
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>ref|NM_193086.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 728

 Score =  180 bits (91), Expect = 3e-42
 Identities = 196/231 (84%)
 Strand = Plus / Plus

                                                                       
Query: 2   aagtcagctgctaagccaccccctaagaagcggatggacaagctcgacacggtcttttcc 61
           |||||||| ||||||||||| ||||||||| ||||||||||||| || || || ||||||
Sbjct: 205 aagtcagcggctaagccaccacctaagaagaggatggacaagcttgatactgtattttcc 264

                                                                       
Query: 62  tgcccgttctgcaaccatgggagcagcgttgaatgccgaattgatatgaagaatctgatt 121
           ||||| |||||||| ||||| || || ||||||||||| |||||||||||||| ||||| 
Sbjct: 265 tgcccattctgcaatcatggcagtagtgttgaatgccggattgatatgaagaacctgatc 324

                                                                       
Query: 122 ggtgaggcgaattgtcgaatctgccaggaaagcttcagcaccaccataaatgcgctgact 181
           || |||||    ||| | ||||| ||||||| ||||||||||||  | ||||| ||||||
Sbjct: 325 ggcgaggcttcatgtaggatctgtcaggaaaacttcagcaccactgtcaatgcactgact 384

                                                              
Query: 182 gagcctattgatatatacagcgaatggatcgatgagtgcgagcgcgtcaac 232
           || || || || ||||| ||||||||||| |||||||||||||| ||||||
Sbjct: 385 gaaccaatcgacatatatagcgaatggattgatgagtgcgagcgtgtcaac 435



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 312 tggtgttattggctgccaccttcagcca 339
           ||||| ||||| ||||||||||||||||
Sbjct: 498 tggtgctattgactgccaccttcagcca 525
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>dbj|AK061633.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-A04, full
           insert sequence
          Length = 728

 Score =  180 bits (91), Expect = 3e-42
 Identities = 196/231 (84%)
 Strand = Plus / Plus

                                                                       
Query: 2   aagtcagctgctaagccaccccctaagaagcggatggacaagctcgacacggtcttttcc 61
           |||||||| ||||||||||| ||||||||| ||||||||||||| || || || ||||||
Sbjct: 205 aagtcagcggctaagccaccacctaagaagaggatggacaagcttgatactgtattttcc 264

                                                                       
Query: 62  tgcccgttctgcaaccatgggagcagcgttgaatgccgaattgatatgaagaatctgatt 121
           ||||| |||||||| ||||| || || ||||||||||| |||||||||||||| ||||| 
Sbjct: 265 tgcccattctgcaatcatggcagtagtgttgaatgccggattgatatgaagaacctgatc 324

                                                                       
Query: 122 ggtgaggcgaattgtcgaatctgccaggaaagcttcagcaccaccataaatgcgctgact 181
           || |||||    ||| | ||||| ||||||| ||||||||||||  | ||||| ||||||
Sbjct: 325 ggcgaggcttcatgtaggatctgtcaggaaaacttcagcaccactgtcaatgcactgact 384

                                                              
Query: 182 gagcctattgatatatacagcgaatggatcgatgagtgcgagcgcgtcaac 232
           || || || || ||||| ||||||||||| |||||||||||||| ||||||
Sbjct: 385 gaaccaatcgacatatatagcgaatggattgatgagtgcgagcgtgtcaac 435



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 312 tggtgttattggctgccaccttcagcca 339
           ||||| ||||| ||||||||||||||||
Sbjct: 498 tggtgctattgactgccaccttcagcca 525
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>dbj|AK120972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041G12, full
           insert sequence
          Length = 770

 Score =  178 bits (90), Expect = 1e-41
 Identities = 204/242 (84%)
 Strand = Plus / Plus

                                                                       
Query: 2   aagtcagctgctaagccaccccctaagaagcggatggacaagctcgacacggtcttttcc 61
           |||||||| ||||||||||| ||||||||| ||||||||||||| || || || ||||||
Sbjct: 210 aagtcagcggctaagccaccacctaagaagaggatggacaagcttgatactgtattttcc 269

                                                                       
Query: 62  tgcccgttctgcaaccatgggagcagcgttgaatgccgaattgatatgaagaatctgatt 121
           ||||| |||||| | ||||| || || ||||||||||| |||||||||||||| ||||| 
Sbjct: 270 tgcccattctgcgatcatggcagtagtgttgaatgccggattgatatgaagaacctgatc 329

                                                                       
Query: 122 ggtgaggcgaattgtcgaatctgccaggaaagcttcagcaccaccataaatgcgctgact 181
           || |||||    ||| | ||||| ||||||| ||||||||||||  | ||||| ||||||
Sbjct: 330 ggcgaggcttcatgtaggatctgtcaggaaaacttcagcaccactgtcaatgcactgact 389

                                                                       
Query: 182 gagcctattgatatatacagcgaatggatcgatgagtgcgagcgcgtcaacgctgtcgga 241
           || || || || ||||| ||||||||||| |||||||||||||| ||||||  |||||||
Sbjct: 390 gaaccaatcgacatatatagcgaatggattgatgagtgcgagcgtgtcaacaatgtcgga 449

             
Query: 242 ga 243
           ||
Sbjct: 450 ga 451



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 312 tggtgttattggctgccaccttcagcca 339
           ||||| ||||| ||||||||||||||||
Sbjct: 503 tggtgctattgactgccaccttcagcca 530
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 86/98 (87%)
 Strand = Plus / Plus

                                                                            
Query: 2        aagtcagctgctaagccaccccctaagaagcggatggacaagctcgacacggtcttttcc 61
                |||||||| ||||||||||| ||||||||| ||||||||||||| || || || ||||||
Sbjct: 26117572 aagtcagcggctaagccaccacctaagaagaggatggacaagcttgatactgtattttcc 26117631

                                                      
Query: 62       tgcccgttctgcaaccatgggagcagcgttgaatgccg 99
                ||||| |||||||| ||||| || || |||||||||||
Sbjct: 26117632 tgcccattctgcaatcatggcagtagtgttgaatgccg 26117669



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                 
Query: 200      agcgaatggatcgatgagtgcgagcgcgtcaac 232
                ||||||||||| |||||||||||||| ||||||
Sbjct: 26118514 agcgaatggattgatgagtgcgagcgtgtcaac 26118546



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 312      tggtgttattggctgccaccttcagcca 339
                ||||| ||||| ||||||||||||||||
Sbjct: 26118609 tggtgctattgactgccaccttcagcca 26118636



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 242      gatgatgatgatgatccatg 261
                ||||||||||||||||||||
Sbjct: 19887493 gatgatgatgatgatccatg 19887512
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>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0519E12
          Length = 152448

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 86/98 (87%)
 Strand = Plus / Plus

                                                                        
Query: 2    aagtcagctgctaagccaccccctaagaagcggatggacaagctcgacacggtcttttcc 61
            |||||||| ||||||||||| ||||||||| ||||||||||||| || || || ||||||
Sbjct: 9430 aagtcagcggctaagccaccacctaagaagaggatggacaagcttgatactgtattttcc 9489

                                                  
Query: 62   tgcccgttctgcaaccatgggagcagcgttgaatgccg 99
            ||||| |||||||| ||||| || || |||||||||||
Sbjct: 9490 tgcccattctgcaatcatggcagtagtgttgaatgccg 9527



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 200   agcgaatggatcgatgagtgcgagcgcgtcaac 232
             ||||||||||| |||||||||||||| ||||||
Sbjct: 10372 agcgaatggattgatgagtgcgagcgtgtcaac 10404



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 312   tggtgttattggctgccaccttcagcca 339
             ||||| ||||| ||||||||||||||||
Sbjct: 10467 tggtgctattgactgccaccttcagcca 10494
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>dbj|AK120292.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050K04, full
           insert sequence
          Length = 876

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                      
Query: 170 aatgcgctgactgagcctattgatatatacagcgaatggatcgatgagtgcgagcgcgt 228
           ||||| |||||||| || || || |||||||||||||||||||| || |||||||||||
Sbjct: 282 aatgctctgactgaacccatcgacatatacagcgaatggatcgacgaatgcgagcgcgt 340
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                
Query: 196     atacagcgaatggatcgatgagtgcgagcgcgt 228
               |||||||||||||||||| || |||||||||||
Sbjct: 1816902 atacagcgaatggatcgacgaatgcgagcgcgt 1816870
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>dbj|AP004997.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0030G11
          Length = 143943

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                               
Query: 196    atacagcgaatggatcgatgagtgcgagcgcgt 228
              |||||||||||||||||| || |||||||||||
Sbjct: 134914 atacagcgaatggatcgacgaatgcgagcgcgt 134882
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>dbj|AP004799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0585B01
          Length = 133231

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 196   atacagcgaatggatcgatgagtgcgagcgcgt 228
             |||||||||||||||||| || |||||||||||
Sbjct: 53546 atacagcgaatggatcgacgaatgcgagcgcgt 53514
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>ref|NM_123971.1| Arabidopsis thaliana unknown protein AT5G46030 mRNA, complete cds
          Length = 686

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 200 agcgaatggatcgatgagtgcgag 223
           ||||||||||||||||||||||||
Sbjct: 333 agcgaatggatcgatgagtgcgag 356
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>gb|BT006515.1| Arabidopsis thaliana At5g46030 gene, complete cds
          Length = 363

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 200 agcgaatggatcgatgagtgcgag 223
           ||||||||||||||||||||||||
Sbjct: 211 agcgaatggatcgatgagtgcgag 234
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>emb|BX833577.1|CNS0A1VS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL63ZA12 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 654

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 200 agcgaatggatcgatgagtgcgag 223
           ||||||||||||||||||||||||
Sbjct: 298 agcgaatggatcgatgagtgcgag 321
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>gb|AY085452.1| Arabidopsis thaliana clone 15222 mRNA, complete sequence
          Length = 687

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 200 agcgaatggatcgatgagtgcgag 223
           ||||||||||||||||||||||||
Sbjct: 333 agcgaatggatcgatgagtgcgag 356
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>dbj|AB006698.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCL19
          Length = 84510

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 200   agcgaatggatcgatgagtgcgag 223
             ||||||||||||||||||||||||
Sbjct: 28662 agcgaatggatcgatgagtgcgag 28685
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>gb|BT002010.1| Arabidopsis thaliana putative protein (At5g46030) mRNA, complete
           cds
          Length = 672

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 200 agcgaatggatcgatgagtgcgag 223
           ||||||||||||||||||||||||
Sbjct: 317 agcgaatggatcgatgagtgcgag 340
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>gb|AC022743.7| Homo sapiens chromosome 18, clone RP11-789C7, complete sequence
          Length = 182466

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 475   aactatggatccatcagattgt 496
             ||||||||||||||||||||||
Sbjct: 91524 aactatggatccatcagattgt 91545
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>gb|AC079145.4| Homo sapiens BAC clone RP11-42N12 from 2, complete sequence
          Length = 137870

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 242   gatgatgatgatgatccatgag 263
             ||||||||||||||||||||||
Sbjct: 53462 gatgatgatgatgatccatgag 53483
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>gb|AF287263.1|AF287263 Mus musculus ATP-binding cassette 1, sub-family A, member 1 (Abca1) gene,
              complete cds
          Length = 278572

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 328    caccttcagccatgtttgtag 348
              |||||||||||||||||||||
Sbjct: 205961 caccttcagccatgtttgtag 205941
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 242      gatgatgatgatgatccatga 262
                |||||||||||||||||||||
Sbjct: 38673863 gatgatgatgatgatccatga 38673883
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>emb|BX834003.1|CNS0A1VY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL8ZD11 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 628

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 200 agcgaatggatcgatgagtgc 220
           |||||||||||||||||||||
Sbjct: 278 agcgaatggatcgatgagtgc 298



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 101 attgatatgaagaatctgattggt 124
           |||||||||||| |||||||||||
Sbjct: 179 attgatatgaagcatctgattggt 202
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>emb|BX830337.1|CNS0A1YT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB74ZC10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 659

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 200 agcgaatggatcgatgagtgc 220
           |||||||||||||||||||||
Sbjct: 303 agcgaatggatcgatgagtgc 323
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>dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1099D03
          Length = 191022

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 242    gatgatgatgatgatccatga 262
              |||||||||||||||||||||
Sbjct: 131836 gatgatgatgatgatccatga 131856
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>emb|AL772397.3| Mouse DNA sequence from clone RP23-95M14 on chromosome 4, complete
              sequence
          Length = 230672

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 328    caccttcagccatgtttgtag 348
              |||||||||||||||||||||
Sbjct: 188751 caccttcagccatgtttgtag 188771
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>ref|NM_119739.3| Arabidopsis thaliana unknown protein AT4G35730 mRNA, complete cds
          Length = 1588

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 242  gatgatgatgatgatccatg 261
            ||||||||||||||||||||
Sbjct: 1018 gatgatgatgatgatccatg 999
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>ref|NM_101213.2| Arabidopsis thaliana sulfotransferase AT1G13430 mRNA, complete cds
          Length = 1248

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 237 tcggagatgatgatgatgat 256
           ||||||||||||||||||||
Sbjct: 469 tcggagatgatgatgatgat 450
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>ref|XM_633714.1| Dictyostelium discoideum hypothetical protein (DDB0218555), partial
            mRNA
          Length = 2412

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 240  gagatgatgatgatgatcca 259
            ||||||||||||||||||||
Sbjct: 1316 gagatgatgatgatgatcca 1335
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>gb|AC168206.7| Mus musculus chromosome 1, clone RP23-17B20, complete sequence
          Length = 245358

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 327    ccaccttcagccatgtttgt 346
              ||||||||||||||||||||
Sbjct: 175686 ccaccttcagccatgtttgt 175705
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>ref|XM_478424.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2115

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 242  gatgatgatgatgatccatg 261
            ||||||||||||||||||||
Sbjct: 1024 gatgatgatgatgatccatg 1043
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>gb|AC099582.7| Mus musculus chromosome 1, clone RP23-188D7, complete sequence
          Length = 192016

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 327    ccaccttcagccatgtttgt 346
              ||||||||||||||||||||
Sbjct: 103306 ccaccttcagccatgtttgt 103287
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>gb|AC115880.11| Mus musculus chromosome 9, clone RP24-365N15, complete sequence
          Length = 202851

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   ctgccaccttcagccatgtt 343
             ||||||||||||||||||||
Sbjct: 95403 ctgccaccttcagccatgtt 95384
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>emb|CR450692.5| Zebrafish DNA sequence from clone CH211-198J13 in linkage group 2,
             complete sequence
          Length = 180976

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    ggtcttttcctgcccgttct 71
             ||||||||||||||||||||
Sbjct: 18205 ggtcttttcctgcccgttct 18186
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>emb|AL161588.2|ATCHRIV84 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 84
          Length = 195452

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 242  gatgatgatgatgatccatg 261
            ||||||||||||||||||||
Sbjct: 4545 gatgatgatgatgatccatg 4526
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>emb|AL161587.2|ATCHRIV83 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 83
          Length = 197859

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 242    gatgatgatgatgatccatg 261
              ||||||||||||||||||||
Sbjct: 197404 gatgatgatgatgatccatg 197385
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>emb|AL031135.1|ATF8D20 Arabidopsis thaliana DNA chromosome 4, BAC clone F8D20 (ESSAII project)
          Length = 94315

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 242   gatgatgatgatgatccatg 261
             ||||||||||||||||||||
Sbjct: 76644 gatgatgatgatgatccatg 76625
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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 51      cggtcttttcctgcccgttc 70
               ||||||||||||||||||||
Sbjct: 3214373 cggtcttttcctgcccgttc 3214392
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>ref|XM_689612.1| PREDICTED: Danio rerio similar to mastermind-like 3 (LOC566340),
           mRNA
          Length = 471

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 237 tcggagatgatgatgatgat 256
           ||||||||||||||||||||
Sbjct: 395 tcggagatgatgatgatgat 414
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>gb|BT006116.1| Arabidopsis thaliana clone U51132 putative steroid sulfotransferase
           (At1g13430) mRNA, complete cds
          Length = 1087

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 237 tcggagatgatgatgatgat 256
           ||||||||||||||||||||
Sbjct: 439 tcggagatgatgatgatgat 420
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 233    gctgtcggagatgatgatgatgat 256
              |||||||| |||||||||||||||
Sbjct: 471461 gctgtcggcgatgatgatgatgat 471484
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>gb|AC011810.8|AC011810 Arabidopsis thaliana chromosome I BAC T6J4 genomic sequence, complete
             sequence
          Length = 103157

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   tcggagatgatgatgatgat 256
             ||||||||||||||||||||
Sbjct: 85078 tcggagatgatgatgatgat 85059
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>gb|AF250324.1|AF250324 Homo sapiens chromosome 4q35 BAC clones RPCI-11-463J17 and
              RPCI-6-92G13RCB2, complete sequence
          Length = 245708

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 111    agaatctgattggtgaggcgaatt 134
              ||||||||||||||||||| ||||
Sbjct: 119038 agaatctgattggtgaggccaatt 119061
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>gb|AC027134.4|AC027134 Arabidopsis thaliana chromosome I BAC F13B4 genomic sequence, complete
             sequence
          Length = 102183

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   tcggagatgatgatgatgat 256
             ||||||||||||||||||||
Sbjct: 37771 tcggagatgatgatgatgat 37752
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>emb|BX649639.4| Zebrafish DNA sequence from clone CH211-102G22 in linkage group 22,
             complete sequence
          Length = 169981

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 243   atgatgatgatgatccatga 262
             ||||||||||||||||||||
Sbjct: 71606 atgatgatgatgatccatga 71625
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>dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0036M16
          Length = 158880

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 242   gatgatgatgatgatccatg 261
             ||||||||||||||||||||
Sbjct: 52143 gatgatgatgatgatccatg 52162
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>dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0650C03
          Length = 144337

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 242    gatgatgatgatgatccatg 261
              ||||||||||||||||||||
Sbjct: 127652 gatgatgatgatgatccatg 127671
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>dbj|AK118984.1| Arabidopsis thaliana At1g13430 mRNA for unknown protein, complete
           cds, clone: RAFL21-32-D02
          Length = 1248

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 237 tcggagatgatgatgatgat 256
           ||||||||||||||||||||
Sbjct: 469 tcggagatgatgatgatgat 450
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>dbj|AK121812.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098C24, full
           insert sequence
          Length = 2185

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 242 gatgatgatgatgatccatg 261
           ||||||||||||||||||||
Sbjct: 824 gatgatgatgatgatccatg 843
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>emb|BX469908.10| Zebrafish DNA sequence from clone DKEY-249P7 in linkage group 20,
             complete sequence
          Length = 108923

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 403   aaacaagcgatgatattgtg 422
             ||||||||||||||||||||
Sbjct: 94313 aaacaagcgatgatattgtg 94332


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,871,022
Number of Sequences: 3902068
Number of extensions: 3871022
Number of successful extensions: 193204
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 192806
Number of HSP's gapped (non-prelim): 393
length of query: 535
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 512
effective length of database: 17,143,297,704
effective search space: 8777368424448
effective search space used: 8777368424448
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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