ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags31i21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_185047.1| Oryza sativa (japonica cultivar-group), mRNA 305 6e-80
2dbj|AB118003.1| Oryza sativa (japonica cultivar-group) bip116 mR... 305 6e-80
3dbj|AK102772.1| Oryza sativa (japonica cultivar-group) cDNA clon... 305 6e-80
4dbj|AK058959.1| Oryza sativa (japonica cultivar-group) cDNA clon... 305 6e-80
5gb|AY105038.1| Zea mays PCO137541 mRNA sequence 260 3e-66
6gb|AY104293.1| Zea mays PCO110259 mRNA sequence 145 1e-31
7ref|XM_476908.1| Oryza sativa (japonica cultivar-group), mRNA 141 2e-30
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 133 5e-28
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 133 5e-28
10gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 genom... 133 5e-28
11dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 80 7e-12
12dbj|AP003753.3| Oryza sativa (japonica cultivar-group) genomic D... 80 7e-12
13gb|AY208876.1| Brassica napus seed specific protein Bn15D14A mRN... 68 3e-08
14dbj|AB026655.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 46 0.093
15gb|AC148764.16| Medicago truncatula clone mth2-30o12, complete s... 44 0.37
16dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, co... 44 0.37
17gb|AC160924.1| Medicago truncatula chromosome 7 BAC clone mte1-7... 44 0.37
18gb|AC126245.3| Mus musculus BAC clone RP24-354D8 from chromosome... 42 1.5
19gb|AF532117.1| Mus musculus strain 129/SvJ BAC clone citb9k22 fr... 42 1.5
20gb|AC005413.1|AC005413 Mus musculus chromosome 17 BAC clone citb... 42 1.5
21gb|AC005665.1|AC005665 Mus musculus chromosome 17 BAC clone citb... 42 1.5
22gb|AY394005.1| Bacteriophage D3112, complete genome 40 5.8
23ref|XM_810034.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 5.8
24ref|XM_811192.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 5.8
25emb|AL591890.31| Human DNA sequence from clone RP11-54A22 on chr... 40 5.8
26emb|CR933736.12| Mouse DNA sequence from clone DN-183N8 on chrom... 40 5.8
27emb|AL596096.7| Mouse DNA sequence from clone RP23-42P20 on chro... 40 5.8
28emb|AL112698.1|CNS01AAQ Botrytis cinerea strain T4 cDNA library 40 5.8
29dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 5.8
30gb|AC092202.28| Mus musculus strain C57BL/6J chromosome 3 clone ... 40 5.8
31gb|AC140190.3| Mus musculus BAC clone RP24-372P19 from 3, comple... 40 5.8
32gb|AC158368.2| Gallus gallus BAC clone CH261-77E11 from chromoso... 40 5.8 
>ref|NM_185047.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1645

 Score =  305 bits (154), Expect = 6e-80
 Identities = 296/342 (86%), Gaps = 1/342 (0%)
 Strand = Plus / Plus

                                                                        
Query: 32   gactcctgttcagtgacttcttcaaccacagcttcggcacgagctggcagaactaagaca 91
            |||||||| || |||||||||||||||||| ||||  || ||||||||| ||| ||| ||
Sbjct: 789  gactcctgctctgtgacttcttcaaccacaacttcaacaagagctggcaaaaccaaggca 848

                                                                        
Query: 92   actgttgcctttgctcctacatttgtatgtgacgaccgtgctgacaagnaggaaagagtt 151
            |||||||   |||| ||| ||||||||||||  || |||||||||||| || || |||||
Sbjct: 849  actgttggtgttgccccttcatttgtatgtgctgatcgtgctgacaag-agaaaggagtt 907

                                                                        
Query: 152  ctacacgaaattagaagagaagcacaaagctttggaggctgagaagaatgaggctgaaac 211
            |||||| |||||||||||||| ||||| || ||||| ||||||||||||||||| ||  |
Sbjct: 908  ctacacaaaattagaagagaaacacaaggccttggaagctgagaagaatgaggccgaggc 967

                                                                        
Query: 212  aaggaaaaaggatgagcaagaagcggctttaaaacaactaaggaagtccttggtcatcag 271
              |||||||||| ||||||||| | || |||||||||||||| |||||||| ||||||||
Sbjct: 968  ccggaaaaaggaagagcaagaaacagccttaaaacaactaagaaagtccttagtcatcag 1027

                                                                        
Query: 272  agcaaaacccatgccaaacttctaccaagaagggccccctccaaaggctgagcttaagaa 331
             ||||| |||||||||| ||||||||||||||| || |||||||||||||| ||||||||
Sbjct: 1028 ggcaaagcccatgccaagcttctaccaagaaggacctcctccaaaggctgaacttaagaa 1087

                                                      
Query: 332  ggtgcctccaacccgtgccaagtcaccaaagtttacaaggag 373
            ||| |||||||| ||||| || ||||||||||||||||||||
Sbjct: 1088 ggtccctccaactcgtgctaaatcaccaaagtttacaaggag 1129
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>dbj|AB118003.1| Oryza sativa (japonica cultivar-group) bip116 mRNA for BRI1-KD
           interacting protein 116, partial cds
          Length = 1072

 Score =  305 bits (154), Expect = 6e-80
 Identities = 296/342 (86%), Gaps = 1/342 (0%)
 Strand = Plus / Plus

                                                                       
Query: 32  gactcctgttcagtgacttcttcaaccacagcttcggcacgagctggcagaactaagaca 91
           |||||||| || |||||||||||||||||| ||||  || ||||||||| ||| ||| ||
Sbjct: 290 gactcctgctctgtgacttcttcaaccacaacttcaacaagagctggcaaaaccaaggca 349

                                                                       
Query: 92  actgttgcctttgctcctacatttgtatgtgacgaccgtgctgacaagnaggaaagagtt 151
           |||||||   |||| ||| ||||||||||||  || |||||||||||| || || |||||
Sbjct: 350 actgttggtgttgccccttcatttgtatgtgctgatcgtgctgacaag-agaaaggagtt 408

                                                                       
Query: 152 ctacacgaaattagaagagaagcacaaagctttggaggctgagaagaatgaggctgaaac 211
           |||||| |||||||||||||| ||||| || ||||| ||||||||||||||||| ||  |
Sbjct: 409 ctacacaaaattagaagagaaacacaaggccttggaagctgagaagaatgaggccgaggc 468

                                                                       
Query: 212 aaggaaaaaggatgagcaagaagcggctttaaaacaactaaggaagtccttggtcatcag 271
             |||||||||| ||||||||| | || |||||||||||||| |||||||| ||||||||
Sbjct: 469 ccggaaaaaggaagagcaagaaacagccttaaaacaactaagaaagtccttagtcatcag 528

                                                                       
Query: 272 agcaaaacccatgccaaacttctaccaagaagggccccctccaaaggctgagcttaagaa 331
            ||||| |||||||||| ||||||||||||||| || |||||||||||||| ||||||||
Sbjct: 529 ggcaaagcccatgccaagcttctaccaagaaggacctcctccaaaggctgaacttaagaa 588

                                                     
Query: 332 ggtgcctccaacccgtgccaagtcaccaaagtttacaaggag 373
           ||| |||||||| ||||| || ||||||||||||||||||||
Sbjct: 589 ggtccctccaactcgtgctaaatcaccaaagtttacaaggag 630
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>dbj|AK102772.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107G17, full
            insert sequence
          Length = 1664

 Score =  305 bits (154), Expect = 6e-80
 Identities = 296/342 (86%), Gaps = 1/342 (0%)
 Strand = Plus / Plus

                                                                        
Query: 32   gactcctgttcagtgacttcttcaaccacagcttcggcacgagctggcagaactaagaca 91
            |||||||| || |||||||||||||||||| ||||  || ||||||||| ||| ||| ||
Sbjct: 831  gactcctgctctgtgacttcttcaaccacaacttcaacaagagctggcaaaaccaaggca 890

                                                                        
Query: 92   actgttgcctttgctcctacatttgtatgtgacgaccgtgctgacaagnaggaaagagtt 151
            |||||||   |||| ||| ||||||||||||  || |||||||||||| || || |||||
Sbjct: 891  actgttggtgttgccccttcatttgtatgtgctgatcgtgctgacaag-agaaaggagtt 949

                                                                        
Query: 152  ctacacgaaattagaagagaagcacaaagctttggaggctgagaagaatgaggctgaaac 211
            |||||| |||||||||||||| ||||| || ||||| ||||||||||||||||| ||  |
Sbjct: 950  ctacacaaaattagaagagaaacacaaggccttggaagctgagaagaatgaggccgaggc 1009

                                                                        
Query: 212  aaggaaaaaggatgagcaagaagcggctttaaaacaactaaggaagtccttggtcatcag 271
              |||||||||| ||||||||| | || |||||||||||||| |||||||| ||||||||
Sbjct: 1010 ccggaaaaaggaagagcaagaaacagccttaaaacaactaagaaagtccttagtcatcag 1069

                                                                        
Query: 272  agcaaaacccatgccaaacttctaccaagaagggccccctccaaaggctgagcttaagaa 331
             ||||| |||||||||| ||||||||||||||| || |||||||||||||| ||||||||
Sbjct: 1070 ggcaaagcccatgccaagcttctaccaagaaggacctcctccaaaggctgaacttaagaa 1129

                                                      
Query: 332  ggtgcctccaacccgtgccaagtcaccaaagtttacaaggag 373
            ||| |||||||| ||||| || ||||||||||||||||||||
Sbjct: 1130 ggtccctccaactcgtgctaaatcaccaaagtttacaaggag 1171
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>dbj|AK058959.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-B08, full
            insert sequence
          Length = 1601

 Score =  305 bits (154), Expect = 6e-80
 Identities = 296/342 (86%), Gaps = 1/342 (0%)
 Strand = Plus / Plus

                                                                        
Query: 32   gactcctgttcagtgacttcttcaaccacagcttcggcacgagctggcagaactaagaca 91
            |||||||| || |||||||||||||||||| ||||  || ||||||||| ||| ||| ||
Sbjct: 827  gactcctgctctgtgacttcttcaaccacaacttcaacaagagctggcaaaaccaaggca 886

                                                                        
Query: 92   actgttgcctttgctcctacatttgtatgtgacgaccgtgctgacaagnaggaaagagtt 151
            |||||||   |||| ||| ||||||||||||  || |||||||||||| || || |||||
Sbjct: 887  actgttggtgttgccccttcatttgtatgtgctgatcgtgctgacaag-agaaaggagtt 945

                                                                        
Query: 152  ctacacgaaattagaagagaagcacaaagctttggaggctgagaagaatgaggctgaaac 211
            |||||| |||||||||||||| ||||| || ||||| ||||||||||||||||| ||  |
Sbjct: 946  ctacacaaaattagaagagaaacacaaggccttggaagctgagaagaatgaggccgaggc 1005

                                                                        
Query: 212  aaggaaaaaggatgagcaagaagcggctttaaaacaactaaggaagtccttggtcatcag 271
              |||||||||| ||||||||| | || |||||||||||||| |||||||| ||||||||
Sbjct: 1006 ccggaaaaaggaagagcaagaaacagccttaaaacaactaagaaagtccttagtcatcag 1065

                                                                        
Query: 272  agcaaaacccatgccaaacttctaccaagaagggccccctccaaaggctgagcttaagaa 331
             ||||| |||||||||| ||||||||||||||| || |||||||||||||| ||||||||
Sbjct: 1066 ggcaaagcccatgccaagcttctaccaagaaggacctcctccaaaggctgaacttaagaa 1125

                                                      
Query: 332  ggtgcctccaacccgtgccaagtcaccaaagtttacaaggag 373
            ||| |||||||| ||||| || ||||||||||||||||||||
Sbjct: 1126 ggtccctccaactcgtgctaaatcaccaaagtttacaaggag 1167
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>gb|AY105038.1| Zea mays PCO137541 mRNA sequence
          Length = 1098

 Score =  260 bits (131), Expect = 3e-66
 Identities = 258/299 (86%), Gaps = 1/299 (0%)
 Strand = Plus / Plus

                                                                       
Query: 72  gagctggcagaactaagacaactgttgcctttgctcctacatttgtatgtgacgaccgtg 131
           |||||||||||||||||||||||||| |  |||| ||  ||||||| ||||   ||||||
Sbjct: 368 gagctggcagaactaagacaactgttcctgttgccccatcatttgtgtgtgctaaccgtg 427

                                                                       
Query: 132 ctgacaagnaggaaagagttctacacgaaattagaagagaagcacaaagctttggaggct 191
           |||||||| ||||| ||||||||||| |||||||| ||||| || ||||||||||| || 
Sbjct: 428 ctgacaag-aggaaggagttctacacaaaattagaggagaaacataaagctttggaagca 486

                                                                       
Query: 192 gagaagaatgaggctgaaacaaggaaaaaggatgagcaagaagcggctttaaaacaacta 251
           |||||| | ||||||||  | ||||||||||| |||||||| |  ||| |||| ||||||
Sbjct: 487 gagaaggacgaggctgaggccaggaaaaaggaagagcaagacgttgctataaagcaacta 546

                                                                       
Query: 252 aggaagtccttggtcatcagagcaaaacccatgccaaacttctaccaagaagggccccct 311
           |||||||| ||||| || ||||| ||||||||||||| |||||| |||||||| ||||| 
Sbjct: 547 aggaagtcattggtgattagagcgaaacccatgccaagcttctatcaagaaggcccccca 606

                                                                      
Query: 312 ccaaaggctgagcttaagaaggtgcctccaacccgtgccaagtcaccaaagtttacaag 370
           ||||||||||| ||||||||||||||||| || |||||||| |||||||||||||||||
Sbjct: 607 ccaaaggctgaacttaagaaggtgcctcctactcgtgccaaatcaccaaagtttacaag 665
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>gb|AY104293.1| Zea mays PCO110259 mRNA sequence
          Length = 1582

 Score =  145 bits (73), Expect = 1e-31
 Identities = 109/121 (90%)
 Strand = Plus / Plus

                                                                       
Query: 260 cttggtcatcagagcaaaacccatgccaaacttctaccaagaagggccccctccaaaggc 319
           ||||||| || |||||||||||||||||| |||||||||||| || ||||| ||||||| 
Sbjct: 789 cttggtcgtccgagcaaaacccatgccaagcttctaccaagagggacccccaccaaaggt 848

                                                                       
Query: 320 tgagcttaagaaggtgcctccaacccgtgccaagtcaccaaagtttacaaggagaaagag 379
           ||| |||||||||||||||||||| ||||||||||||||||| || ||| ||||||||||
Sbjct: 849 tgaacttaagaaggtgcctccaactcgtgccaagtcaccaaaattgacacggagaaagag 908

            
Query: 380 c 380
           |
Sbjct: 909 c 909
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>ref|XM_476908.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1101

 Score =  141 bits (71), Expect = 2e-30
 Identities = 152/179 (84%)
 Strand = Plus / Plus

                                                                       
Query: 211 caaggaaaaaggatgagcaagaagcggctttaaaacaactaaggaagtccttggtcatca 270
           |||| |||||||| ||||||||||  ||| | |||||||||||||||    |||| || |
Sbjct: 710 caagaaaaaaggaagagcaagaagaagctctgaaacaactaaggaagaatctggttatta 769

                                                                       
Query: 271 gagcaaaacccatgccaaacttctaccaagaagggccccctccaaaggctgagcttaaga 330
           |||||||||||||||||| |||||| ||||| || ||||| || |||| ||| |||||||
Sbjct: 770 gagcaaaacccatgccaagcttctatcaagagggtcccccacctaaggttgaacttaaga 829

                                                                      
Query: 331 aggtgcctccaacccgtgccaagtcaccaaagtttacaaggagaaagagcagcggcgat 389
           ||||||||||||| |||||||| |||||||| || ||| ||||||||||| || |||||
Sbjct: 830 aggtgcctccaactcgtgccaaatcaccaaaattgacacggagaaagagctgcagcgat 888
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  133 bits (67), Expect = 5e-28
 Identities = 103/115 (89%)
 Strand = Plus / Plus

                                                                            
Query: 220      aggatgagcaagaagcggctttaaaacaactaaggaagtccttggtcatcagagcaaaac 279
                |||| ||||||||| | || |||||||||||||| |||||||| |||||||| ||||| |
Sbjct: 33009978 aggaagagcaagaaacagccttaaaacaactaagaaagtccttagtcatcagggcaaagc 33010037

                                                                       
Query: 280      ccatgccaaacttctaccaagaagggccccctccaaaggctgagcttaagaaggt 334
                ||||||||| ||||||||||||||| || |||||||||||||| |||||||||||
Sbjct: 33010038 ccatgccaagcttctaccaagaaggacctcctccaaaggctgaacttaagaaggt 33010092



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                          
Query: 148      agttctacacgaaattagaagagaagcacaaagctttggaggctgagaagaatgaggc 205
                |||||||||| |||||||||||||| ||||| || ||||| |||||||||||||||||
Sbjct: 33009495 agttctacacaaaattagaagagaaacacaaggccttggaagctgagaagaatgaggc 33009552



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                             
Query: 329      gaaggtgcctccaacccgtgccaagtcaccaaagtttacaaggag 373
                |||||| |||||||| ||||| || ||||||||||||||||||||
Sbjct: 33010459 gaaggtccctccaactcgtgctaaatcaccaaagtttacaaggag 33010503



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 70/85 (82%)
 Strand = Plus / Plus

                                                                            
Query: 55       aaccacagcttcggcacgagctggcagaactaagacaactgttgcctttgctcctacatt 114
                ||||||| ||||  || ||||||||| ||| ||| |||||||||   |||| ||| ||||
Sbjct: 33009276 aaccacaacttcaacaagagctggcaaaaccaaggcaactgttggtgttgccccttcatt 33009335

                                         
Query: 115      tgtatgtgacgaccgtgctgacaag 139
                ||||||||  || ||||||||||||
Sbjct: 33009336 tgtatgtgctgatcgtgctgacaag 33009360
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  133 bits (67), Expect = 5e-28
 Identities = 103/115 (89%)
 Strand = Plus / Plus

                                                                            
Query: 220      aggatgagcaagaagcggctttaaaacaactaaggaagtccttggtcatcagagcaaaac 279
                |||| ||||||||| | || |||||||||||||| |||||||| |||||||| ||||| |
Sbjct: 33100488 aggaagagcaagaaacagccttaaaacaactaagaaagtccttagtcatcagggcaaagc 33100547

                                                                       
Query: 280      ccatgccaaacttctaccaagaagggccccctccaaaggctgagcttaagaaggt 334
                ||||||||| ||||||||||||||| || |||||||||||||| |||||||||||
Sbjct: 33100548 ccatgccaagcttctaccaagaaggacctcctccaaaggctgaacttaagaaggt 33100602



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                          
Query: 148      agttctacacgaaattagaagagaagcacaaagctttggaggctgagaagaatgaggc 205
                |||||||||| |||||||||||||| ||||| || ||||| |||||||||||||||||
Sbjct: 33100005 agttctacacaaaattagaagagaaacacaaggccttggaagctgagaagaatgaggc 33100062



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                             
Query: 329      gaaggtgcctccaacccgtgccaagtcaccaaagtttacaaggag 373
                |||||| |||||||| ||||| || ||||||||||||||||||||
Sbjct: 33100969 gaaggtccctccaactcgtgctaaatcaccaaagtttacaaggag 33101013



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 70/85 (82%)
 Strand = Plus / Plus

                                                                            
Query: 55       aaccacagcttcggcacgagctggcagaactaagacaactgttgcctttgctcctacatt 114
                ||||||| ||||  || ||||||||| ||| ||| |||||||||   |||| ||| ||||
Sbjct: 33099786 aaccacaacttcaacaagagctggcaaaaccaaggcaactgttggtgttgccccttcatt 33099845

                                         
Query: 115      tgtatgtgacgaccgtgctgacaag 139
                ||||||||  || ||||||||||||
Sbjct: 33099846 tgtatgtgctgatcgtgctgacaag 33099870
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>gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 genomic sequence, complete
              sequence
          Length = 139823

 Score =  133 bits (67), Expect = 5e-28
 Identities = 103/115 (89%)
 Strand = Plus / Minus

                                                                          
Query: 220    aggatgagcaagaagcggctttaaaacaactaaggaagtccttggtcatcagagcaaaac 279
              |||| ||||||||| | || |||||||||||||| |||||||| |||||||| ||||| |
Sbjct: 113330 aggaagagcaagaaacagccttaaaacaactaagaaagtccttagtcatcagggcaaagc 113271

                                                                     
Query: 280    ccatgccaaacttctaccaagaagggccccctccaaaggctgagcttaagaaggt 334
              ||||||||| ||||||||||||||| || |||||||||||||| |||||||||||
Sbjct: 113270 ccatgccaagcttctaccaagaaggacctcctccaaaggctgaacttaagaaggt 113216



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 53/58 (91%)
 Strand = Plus / Minus

                                                                        
Query: 148    agttctacacgaaattagaagagaagcacaaagctttggaggctgagaagaatgaggc 205
              |||||||||| |||||||||||||| ||||| || ||||| |||||||||||||||||
Sbjct: 113813 agttctacacaaaattagaagagaaacacaaggccttggaagctgagaagaatgaggc 113756



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                           
Query: 329    gaaggtgcctccaacccgtgccaagtcaccaaagtttacaaggag 373
              |||||| |||||||| ||||| || ||||||||||||||||||||
Sbjct: 112849 gaaggtccctccaactcgtgctaaatcaccaaagtttacaaggag 112805



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                          
Query: 55     aaccacagcttcggcacgagctggcagaactaagacaactgttgcctttgctcctacatt 114
              ||||||| ||||  || ||||||||| ||| ||| |||||||||   |||| ||| ||||
Sbjct: 114032 aaccacaacttcaacaagagctggcaaaaccaaggcaactgttggtgttgccccttcatt 113973

                                       
Query: 115    tgtatgtgacgaccgtgctgacaag 139
              ||||||||  || ||||||||||||
Sbjct: 113972 tgtatgtgctgatcgtgctgacaag 113948
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 97/116 (83%)
 Strand = Plus / Plus

                                                                           
Query: 220     aggatgagcaagaagcggctttaaaacaactaaggaagtccttggtcatcagagcaaaac 279
               |||| ||||||||||  ||| | |||||||||||||||    |||| || ||||||||||
Sbjct: 4567600 aggaagagcaagaagaagctctgaaacaactaaggaagaatctggttattagagcaaaac 4567659

                                                                       
Query: 280     ccatgccaaacttctaccaagaagggccccctccaaaggctgagcttaagaaggtg 335
               ||||||||| |||||| ||||| || ||||| || |||| ||| ||||||||||||
Sbjct: 4567660 ccatgccaagcttctatcaagagggtcccccacctaaggttgaacttaagaaggtg 4567715



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                          
Query: 331     aggtgcctccaacccgtgccaagtcaccaaagtttacaaggagaaagagcagcggcgat 389
               ||||||||||||| |||||||| |||||||| || ||| ||||||||||| || |||||
Sbjct: 4568342 aggtgcctccaactcgtgccaaatcaccaaaattgacacggagaaagagctgcagcgat 4568400
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>dbj|AP003753.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1339_B08
          Length = 119212

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 97/116 (83%)
 Strand = Plus / Plus

                                                                         
Query: 220   aggatgagcaagaagcggctttaaaacaactaaggaagtccttggtcatcagagcaaaac 279
             |||| ||||||||||  ||| | |||||||||||||||    |||| || ||||||||||
Sbjct: 32940 aggaagagcaagaagaagctctgaaacaactaaggaagaatctggttattagagcaaaac 32999

                                                                     
Query: 280   ccatgccaaacttctaccaagaagggccccctccaaaggctgagcttaagaaggtg 335
             ||||||||| |||||| ||||| || ||||| || |||| ||| ||||||||||||
Sbjct: 33000 ccatgccaagcttctatcaagagggtcccccacctaaggttgaacttaagaaggtg 33055



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                        
Query: 331   aggtgcctccaacccgtgccaagtcaccaaagtttacaaggagaaagagcagcggcgat 389
             ||||||||||||| |||||||| |||||||| || ||| ||||||||||| || |||||
Sbjct: 33682 aggtgcctccaactcgtgccaaatcaccaaaattgacacggagaaagagctgcagcgat 33740
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>gb|AY208876.1| Brassica napus seed specific protein Bn15D14A mRNA, partial cds
          Length = 980

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 76/90 (84%)
 Strand = Plus / Plus

                                                                       
Query: 272 agcaaaacccatgccaaacttctaccaagaagggccccctccaaaggctgagcttaagaa 331
           |||||| || ||||| ||||||||||| |||||||| |||||||||| ||| ||||||||
Sbjct: 515 agcaaacccaatgcctaacttctaccatgaagggcctcctccaaaggttgaacttaagaa 574

                                         
Query: 332 ggtgcctccaacccgtgccaagtcaccaaa 361
           |   |||||||| || || ||||| |||||
Sbjct: 575 gcctcctccaactcgagcaaagtcgccaaa 604
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>dbj|AB026655.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MXC7
          Length = 79284

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                         
Query: 272   agcaaaacccatgccaaacttctaccaagaagggccccctccaaaggctgagcttaagaa 331
             |||||| || |||||||| || || || |||||||| || ||||||| ||| ||||||||
Sbjct: 55537 agcaaacccaatgccaaaattttatcatgaagggcctcccccaaaggttgaacttaagaa 55478

                
Query: 332   ggt 334
             |||
Sbjct: 55477 ggt 55475
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>gb|AC148764.16| Medicago truncatula clone mth2-30o12, complete sequence
          Length = 107371

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 162   ttagaagagaagcacaaagctttgga 187
             ||||||| ||||||||||||||||||
Sbjct: 99621 ttagaagcgaagcacaaagctttgga 99596
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>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 144     aaagagttctacacgaaattag 165
               ||||||||||||||||||||||
Sbjct: 5204988 aaagagttctacacgaaattag 5205009
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>gb|AC160924.1| Medicago truncatula chromosome 7 BAC clone mte1-74g1, complete sequence
          Length = 98471

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 162   ttagaagagaagcacaaagctttgga 187
             ||||||| ||||||||||||||||||
Sbjct: 56707 ttagaagcgaagcacaaagctttgga 56682
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>gb|AC126245.3| Mus musculus BAC clone RP24-354D8 from chromosome 17, complete sequence
          Length = 160440

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 360   aagtttacaaggagaaagagc 380
             |||||||||||||||||||||
Sbjct: 31861 aagtttacaaggagaaagagc 31881
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>gb|AF532117.1| Mus musculus strain 129/SvJ BAC clone citb9k22 from the MHC region,
             complete sequence
          Length = 173288

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 360   aagtttacaaggagaaagagc 380
             |||||||||||||||||||||
Sbjct: 11276 aagtttacaaggagaaagagc 11296
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>gb|AC005413.1|AC005413 Mus musculus chromosome 17 BAC clone citb592j14 from the MHC region,
            complete sequence
          Length = 123371

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 360  aagtttacaaggagaaagagc 380
            |||||||||||||||||||||
Sbjct: 3043 aagtttacaaggagaaagagc 3023
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>gb|AC005665.1|AC005665 Mus musculus chromosome 17 BAC clone citb76k14 from the MHC region,
             complete sequence
          Length = 124186

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 360   aagtttacaaggagaaagagc 380
             |||||||||||||||||||||
Sbjct: 16306 aagtttacaaggagaaagagc 16286
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>gb|AY394005.1| Bacteriophage D3112, complete genome
          Length = 37611

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 373   gaaagagcagcggcgatggc 392
             ||||||||||||||||||||
Sbjct: 19836 gaaagagcagcggcgatggc 19817
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>ref|XM_810034.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053508919.80) partial mRNA
          Length = 741

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 382 gcggcgatggcgcaccagcg 401
           ||||||||||||||||||||
Sbjct: 337 gcggcgatggcgcaccagcg 318
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>ref|XM_811192.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053506513.40) partial mRNA
          Length = 741

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 382 gcggcgatggcgcaccagcg 401
           ||||||||||||||||||||
Sbjct: 337 gcggcgatggcgcaccagcg 318
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>emb|AL591890.31| Human DNA sequence from clone RP11-54A22 on chromosome 9 Contains three
             novel genes, and the 5' end of the COL5A1 gene for
             collagen (type V) alpha 1, and a CpG island, complete
             sequence
          Length = 173415

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 179   agctttggaggctgagaaga 198
             ||||||||||||||||||||
Sbjct: 71242 agctttggaggctgagaaga 71223
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>emb|CR933736.12| Mouse DNA sequence from clone DN-183N8 on chromosome 11, complete
            sequence
          Length = 194230

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 216  aaaaaggatgagcaagaagc 235
            ||||||||||||||||||||
Sbjct: 5080 aaaaaggatgagcaagaagc 5061
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>emb|AL596096.7| Mouse DNA sequence from clone RP23-42P20 on chromosome 11 Contains the 5'
              end of the Alox12e gene for epidermal arachidonate
              lipoxygenase, the gene for arachidonate 15-lipoxygenase, a
              novel pseudogene, two genes for novel proteins
              (4930563C04Rik, 1110030J09Rik), a Mitochondrial 28S
              ribosomal protein pseudogene, a NADH dehydrogenase
              (ubiquinone) 1 beta subcomplex 8 (Ndufb8) pseudogene, the
              gene for a novel protein similar to Beta-arrestin 2
              (Arrestin, beta 2) (LOC216869), the Cxcl16 gene for
              chemokine (C-X-C motif) ligand 16, the gene for a novel
              protein similar to human zinc finger MYND domain containg
              15 (ZMYND15), the 5' end of the gene for a novel protein
              (2010003F10Rik) and three CpG islands, complete sequence
          Length = 193277

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 216    aaaaaggatgagcaagaagc 235
              ||||||||||||||||||||
Sbjct: 165723 aaaaaggatgagcaagaagc 165704
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>emb|AL112698.1|CNS01AAQ Botrytis cinerea strain T4 cDNA library
          Length = 720

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 38  tgttcagtgacttcttcaac 57
           ||||||||||||||||||||
Sbjct: 501 tgttcagtgacttcttcaac 520
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 67      ggcacgagctggcagaacta 86
               ||||||||||||||||||||
Sbjct: 3685618 ggcacgagctggcagaacta 3685637
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>gb|AC092202.28| Mus musculus strain C57BL/6J chromosome 3 clone rp23-407b16, complete
              sequence
          Length = 196249

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 164    agaagagaagcacaaagctt 183
              ||||||||||||||||||||
Sbjct: 187589 agaagagaagcacaaagctt 187608
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>gb|AC140190.3| Mus musculus BAC clone RP24-372P19 from 3, complete sequence
          Length = 205702

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 164    agaagagaagcacaaagctt 183
              ||||||||||||||||||||
Sbjct: 149604 agaagagaagcacaaagctt 149585
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>gb|AC158368.2| Gallus gallus BAC clone CH261-77E11 from chromosome unknown, complete
              sequence
          Length = 180657

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 271    gagcaaaacccatgccaaac 290
              ||||||||||||||||||||
Sbjct: 113089 gagcaaaacccatgccaaac 113070


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,212,692
Number of Sequences: 3902068
Number of extensions: 4212692
Number of successful extensions: 89310
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89146
Number of HSP's gapped (non-prelim): 151
length of query: 429
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 407
effective length of database: 17,147,199,772
effective search space: 6978910307204
effective search space used: 6978910307204
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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