| Clone Name | bags31i17 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC104283.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1607_F09, complete sequence Length = 95755 Score = 113 bits (57), Expect = 5e-22 Identities = 99/113 (87%) Strand = Plus / Minus Query: 319 aaaacaaaaagagttacgagagtggaactgaacaaaagggctcgtcgtaaagagaggtta 378 ||||| ||||||||||| ||||| |||||||||||||| ||||||||||| ||||||||| Sbjct: 50102 aaaacgaaaagagttacaagagtagaactgaacaaaagagctcgtcgtaaggagaggtta 50043 Query: 379 aggacagaagcagatgcaaagaaactggaagttctttcaaagcaaatagatag 431 || ||||||| || |||||||| ||||| |||||||||| |||||||||| Sbjct: 50042 agagcagaagctgaagcaaagaagatggaaaatctttcaaaggaaatagatag 49990 Score = 103 bits (52), Expect = 5e-19 Identities = 97/112 (86%) Strand = Plus / Minus Query: 95 aggatgctcttgctctagccgttgctgatgaaatgcgcaagatctacacgaaagagttag 154 ||||| ||||||||| ||| ||||||||||| ||||| || ||||||||||||||||||| Sbjct: 51094 aggattctcttgctcaagctgttgctgatgagatgcgtaaaatctacacgaaagagttag 51035 Query: 155 gccccacaccagtgccacttactgttcttggtcaagcagtagctgaagaaga 206 | |||| ||| |||||||||| ||||| |||| ||||| | |||||||||| Sbjct: 51034 ggcccaaacctgtgccacttattgttcctggtgaagcaatcactgaagaaga 50983 Score = 69.9 bits (35), Expect = 7e-09 Identities = 57/63 (90%), Gaps = 1/63 (1%) Strand = Plus / Minus Query: 14 aggtctaccacatctgtgattcctgcggttgaagttgagcctcaagggatgttcatttaa 73 ||||||||| |||||||||||||||| |||||||||||| | | | |||||||||||||| Sbjct: 51296 aggtctaccgcatctgtgattcctgctgttgaagttgaggcccca-ggatgttcatttaa 51238 Query: 74 tcc 76 ||| Sbjct: 51237 tcc 51235 Score = 40.1 bits (20), Expect = 6.3 Identities = 41/48 (85%) Strand = Plus / Minus Query: 249 tgatggagatgtagatgctgcagaaggcgatggagaccaggatgctga 296 ||||||||||| || || || |||||| |||| |||||||| |||||| Sbjct: 50644 tgatggagatgaagctgttgaagaaggtgatgaagaccaggctgctga 50597
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 113 bits (57), Expect = 5e-22 Identities = 99/113 (87%) Strand = Plus / Minus Query: 319 aaaacaaaaagagttacgagagtggaactgaacaaaagggctcgtcgtaaagagaggtta 378 ||||| ||||||||||| ||||| |||||||||||||| ||||||||||| ||||||||| Sbjct: 2483080 aaaacgaaaagagttacaagagtagaactgaacaaaagagctcgtcgtaaggagaggtta 2483021 Query: 379 aggacagaagcagatgcaaagaaactggaagttctttcaaagcaaatagatag 431 || ||||||| || |||||||| ||||| |||||||||| |||||||||| Sbjct: 2483020 agagcagaagctgaagcaaagaagatggaaaatctttcaaaggaaatagatag 2482968 Score = 103 bits (52), Expect = 5e-19 Identities = 97/112 (86%) Strand = Plus / Minus Query: 95 aggatgctcttgctctagccgttgctgatgaaatgcgcaagatctacacgaaagagttag 154 ||||| ||||||||| ||| ||||||||||| ||||| || ||||||||||||||||||| Sbjct: 2484072 aggattctcttgctcaagctgttgctgatgagatgcgtaaaatctacacgaaagagttag 2484013 Query: 155 gccccacaccagtgccacttactgttcttggtcaagcagtagctgaagaaga 206 | |||| ||| |||||||||| ||||| |||| ||||| | |||||||||| Sbjct: 2484012 ggcccaaacctgtgccacttattgttcctggtgaagcaatcactgaagaaga 2483961 Score = 69.9 bits (35), Expect = 7e-09 Identities = 57/63 (90%), Gaps = 1/63 (1%) Strand = Plus / Minus Query: 14 aggtctaccacatctgtgattcctgcggttgaagttgagcctcaagggatgttcatttaa 73 ||||||||| |||||||||||||||| |||||||||||| | | | |||||||||||||| Sbjct: 2484274 aggtctaccgcatctgtgattcctgctgttgaagttgaggcccca-ggatgttcatttaa 2484216 Query: 74 tcc 76 ||| Sbjct: 2484215 tcc 2484213 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 305 ctggagagaggaagaaaacaaaaa 328 ||||||||| |||||||||||||| Sbjct: 17032505 ctggagagaagaagaaaacaaaaa 17032482 Score = 40.1 bits (20), Expect = 6.3 Identities = 41/48 (85%) Strand = Plus / Minus Query: 249 tgatggagatgtagatgctgcagaaggcgatggagaccaggatgctga 296 ||||||||||| || || || |||||| |||| |||||||| |||||| Sbjct: 2483622 tgatggagatgaagctgttgaagaaggtgatgaagaccaggctgctga 2483575
>gb|AY108180.1| Zea mays PCO134590 mRNA sequence Length = 1538 Score = 77.8 bits (39), Expect = 3e-11 Identities = 120/147 (81%) Strand = Plus / Plus Query: 321 aacaaaaagagttacgagagtggaactgaacaaaagggctcgtcgtaaagagaggttaag 380 ||||||||||||||| ||||| ||| |||||| ||| ||||| || || ||||||||||| Sbjct: 907 aacaaaaagagttacaagagtagaaatgaacagaagagctcgccggaaggagaggttaag 966 Query: 381 gacagaagcagatgcaaagaaactggaagttctttcaaagcaaatagatagcttgccaaa 440 ||||||| | ||||||||| ||||| | ||| || |||| || ||||||||||| Sbjct: 967 agcagaagcgaaagcaaagaaaatggaaaatattttgaaagaaattgacagcttgccaaa 1026 Query: 441 tatattagaggagatagcgaaagagga 467 |||| | || |||||||| |||||||| Sbjct: 1027 tataatggatgagatagctaaagagga 1053 Score = 77.8 bits (39), Expect = 3e-11 Identities = 158/195 (81%), Gaps = 2/195 (1%) Strand = Plus / Plus Query: 32 attcctgcggttgaagttgagcctcaagggatgttcatttaatcctccacatgaagccca 91 |||||||| ||||||||||||||| ||| ||||||||||||||| ||| ||||| || Sbjct: 635 attcctgctgttgaagttgagcctgcagg-atgttcatttaatcccccattcgaagcgca 693 Query: 92 tcaaggatgctcttgctctagccgttgctgatgaaatgcgcaagatctacacgaaagagt 151 ||||| || ||||||||| ||| || || ||||||| ||||| |||| ||||||| Sbjct: 694 tcaag-attctcttgctcaagctgtagcagatgaaaaacgcaaagagtacatgaaagagc 752 Query: 152 taggccccacaccagtgccacttactgttcttggtcaagcagtagctgaagaagacaaat 211 | || || ||||| || ||||| | |||| |||| |||| |||| |||||||| |||| Sbjct: 753 tggggccaacacctgtaccactcatagttcctggtgaagctatagccgaagaagataaat 812 Query: 212 tttttcttgatgctg 226 ||||||||||||||| Sbjct: 813 tttttcttgatgctg 827
>gb|AC125291.3| Drosophila melanogaster X BAC CH221-17A11 (CHORI Sheared BAC Drosophila melanogaster library) complete sequence Length = 166613 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 240 tgctgctgctgatggagatgtagatgctgc 269 ||||||||||||||||||||||| |||||| Sbjct: 160270 tgctgctgctgatggagatgtagttgctgc 160241
>gb|AC023723.4| Drosophila melanogaster X BAC RP98-48E6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179363 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 240 tgctgctgctgatggagatgtagatgctgc 269 ||||||||||||||||||||||| |||||| Sbjct: 23527 tgctgctgctgatggagatgtagttgctgc 23498
>gb|AC023709.4| Drosophila melanogaster X BAC RP98-10I17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163710 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 240 tgctgctgctgatggagatgtagatgctgc 269 ||||||||||||||||||||||| |||||| Sbjct: 121574 tgctgctgctgatggagatgtagttgctgc 121545
>ref|NM_132412.1| Drosophila melanogaster CG9817-RA (CG9817), mRNA Length = 6497 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 240 tgctgctgctgatggagatgtagatgctgc 269 ||||||||||||||||||||||| |||||| Sbjct: 2858 tgctgctgctgatggagatgtagttgctgc 2829
>gb|AE003451.5| Drosophila melanogaster chromosome X, section 35 of 74 of the complete sequence Length = 285729 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 240 tgctgctgctgatggagatgtagatgctgc 269 ||||||||||||||||||||||| |||||| Sbjct: 121172 tgctgctgctgatggagatgtagttgctgc 121201
>ref|XM_638141.1| Dictyostelium discoideum hypothetical protein (DDB0217783), partial mRNA Length = 3012 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 238 gatgctgctgctgatggagatgta 261 |||||||||||||||||||||||| Sbjct: 2630 gatgctgctgctgatggagatgta 2607
>gb|AC154910.3| Mus musculus BAC clone RP23-70L9 from chromosome 12, complete sequence Length = 243671 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Minus Query: 219 tgatgctgctgatgatggagatgctgctgctgatgg 254 ||||| || ||||||||| ||||||||||||||||| Sbjct: 4065 tgatggtgatgatgatggtgatgctgctgctgatgg 4030
>gb|AC116924.3| Dictyostelium discoideum chromosome 2 map 6357117-6445670 strain AX4, complete sequence Length = 88549 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 238 gatgctgctgctgatggagatgta 261 |||||||||||||||||||||||| Sbjct: 5055 gatgctgctgctgatggagatgta 5078
>gb|AC122029.4| Mus musculus BAC clone RP24-400A11 from chromosome 12, complete sequence Length = 139357 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Minus Query: 219 tgatgctgctgatgatggagatgctgctgctgatgg 254 ||||| || ||||||||| ||||||||||||||||| Sbjct: 120639 tgatggtgatgatgatggtgatgctgctgctgatgg 120604
>gb|AC137155.3| Mus musculus BAC clone RP23-66E11 from 12, complete sequence Length = 211064 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Minus Query: 219 tgatgctgctgatgatggagatgctgctgctgatgg 254 ||||| || ||||||||| ||||||||||||||||| Sbjct: 92730 tgatggtgatgatgatggtgatgctgctgctgatgg 92695
>ref|NM_033448.1| Homo sapiens keratin 6 irs (KRT6IRS), mRNA Length = 2255 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctg 244 ||||||||||||||||||||||| Sbjct: 1417 tgctgctgatgatggagatgctg 1395
>gb|BC103918.1| Homo sapiens keratin 6 irs, mRNA (cDNA clone MGC:119391 IMAGE:40006781), complete cds Length = 1921 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctg 244 ||||||||||||||||||||||| Sbjct: 1395 tgctgctgatgatggagatgctg 1373
>gb|BC103917.1| Homo sapiens keratin 6 irs, mRNA (cDNA clone MGC:119390 IMAGE:40006780), complete cds Length = 1921 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctg 244 ||||||||||||||||||||||| Sbjct: 1395 tgctgctgatgatggagatgctg 1373
>ref|XM_637697.1| Dictyostelium discoideum hypothetical protein (DDB0217964), partial mRNA Length = 1035 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 219 tgatgctgctgatgatggagatgctgctgctgatg 253 ||||||||||||||||| |||||||||| ||||| Sbjct: 786 tgatgctgctgatgatgatgatgctgctgatgatg 752
>ref|XM_509079.1| PREDICTED: Pan troglodytes similar to keratin 6 irs (LOC451919), mRNA Length = 3921 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctg 244 ||||||||||||||||||||||| Sbjct: 1450 tgctgctgatgatggagatgctg 1428
>ref|XM_611783.2| PREDICTED: Bos taurus similar to keratin 6 irs (LOC532644), mRNA Length = 1758 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctg 244 ||||||||||||||||||||||| Sbjct: 1381 tgctgctgatgatggagatgctg 1359
>gb|AC116977.2| Dictyostelium discoideum chromosome 2 map 5515173-5817331 strain AX4, complete sequence Length = 302156 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 219 tgatgctgctgatgatggagatgctgctgctgatg 253 ||||||||||||||||| |||||||||| ||||| Sbjct: 278529 tgatgctgctgatgatgatgatgctgctgatgatg 278495
>emb|AL596210.20| Human DNA sequence from clone RP11-92O17 on chromosome 1 Contains part of the CAMTA1 gene for calmodulin binding transcription activator 1, complete sequence Length = 107112 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 228 tgatgatggagatgctgctgctgatgg 254 ||||||||| ||||||||||||||||| Sbjct: 16011 tgatgatggtgatgctgctgctgatgg 15985
>ref|XM_502474.1| Yarrowia lipolytica CLIB122, YALI0D06193g predicted mRNA Length = 1944 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 219 tgatgctgctgatgatggagatgctgctgctgatg 253 |||||||||||||| || |||||||||||||||| Sbjct: 440 tgatgctgctgatgctgttgatgctgctgctgatg 406
>gb|BT009932.1| Drosophila melanogaster SD08871 full insert cDNA Length = 4382 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 220 gatgctgctgatgatggagatgctgctgctg 250 |||||||||| |||||||| ||||||||||| Sbjct: 3712 gatgctgctgctgatggagctgctgctgctg 3682
>emb|AJ308599.1|HSA308599 Homo sapiens mRNA for keratin 6 irs (KRT6IRS gene) Length = 2255 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctg 244 ||||||||||||||||||||||| Sbjct: 1417 tgctgctgatgatggagatgctg 1395
>emb|CR858130.1| Pongo pygmaeus mRNA; cDNA DKFZp468M2112 (from clone DKFZp468M2112) Length = 2283 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctg 244 ||||||||||||||||||||||| Sbjct: 1446 tgctgctgatgatggagatgctg 1424
>gb|AC023722.4| Drosophila melanogaster X BAC RP98-48O24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 191590 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 220 gatgctgctgatgatggagatgctgctgctg 250 |||||||||| |||||||| ||||||||||| Sbjct: 4323 gatgctgctgctgatggagctgctgctgctg 4353
>gb|AC023699.4| Drosophila melanogaster X BAC RP98-11K20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177941 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 220 gatgctgctgatgatggagatgctgctgctg 250 |||||||||| |||||||| ||||||||||| Sbjct: 108427 gatgctgctgctgatggagctgctgctgctg 108457
>dbj|AK122795.1| Homo sapiens cDNA FLJ16362 fis, clone THYMU2030912, highly similar to Mus musculus mRNA for type II cytokeratin Length = 2264 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctg 244 ||||||||||||||||||||||| Sbjct: 1445 tgctgctgatgatggagatgctg 1423
>ref|NM_132114.1| Drosophila melanogaster CG14442-RA (CG14442), mRNA Length = 4747 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 220 gatgctgctgatgatggagatgctgctgctg 250 |||||||||| |||||||| ||||||||||| Sbjct: 3967 gatgctgctgctgatggagctgctgctgctg 3937
>gb|AF113024.1|AF113024 Cyprinodon diabolis microsatellite C275 sequence Length = 300 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 219 tgatgctgctgatgatggagatgctgctgctgatg 253 ||||||||||||||||| |||| ||||||||||| Sbjct: 215 tgatgctgctgatgatgatgatgatgctgctgatg 181
>gb|AE003438.3| Drosophila melanogaster chromosome X, section 22 of 74 of the complete sequence Length = 299943 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 220 gatgctgctgatgatggagatgctgctgctg 250 |||||||||| |||||||| ||||||||||| Sbjct: 150314 gatgctgctgctgatggagctgctgctgctg 150344
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 219 tgatgctgctgatgatggagatgctgctgctgatg 253 |||||||||||||| || |||||||||||||||| Sbjct: 794763 tgatgctgctgatgctgttgatgctgctgctgatg 794729
>emb|AJ308600.1|HSA308600 Homo sapiens partial mRNA for nonsensical transcript of keratin 6 irs (KRT6IRS gene), clone scl204 Length = 2153 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctg 244 ||||||||||||||||||||||| Sbjct: 1324 tgctgctgatgatggagatgctg 1302
>ref|XM_855259.1| PREDICTED: Canis familiaris similar to Keratin, type II cytoskeletal 5 (Cytokeratin 5) (K5) (CK 5) (58 kDa cytokeratin), transcript variant 20 (LOC486522), mRNA Length = 3250 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 223 gctgctgatgatggagatgctg 244 |||||||||||||||||||||| Sbjct: 1380 gctgctgatgatggagatgctg 1359
>ref|XM_855231.1| PREDICTED: Canis familiaris similar to Keratin, type II cytoskeletal 5 (Cytokeratin 5) (K5) (CK 5) (58 kDa cytokeratin), transcript variant 19 (LOC486522), mRNA Length = 3229 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 223 gctgctgatgatggagatgctg 244 |||||||||||||||||||||| Sbjct: 1380 gctgctgatgatggagatgctg 1359
>ref|XM_855192.1| PREDICTED: Canis familiaris similar to Keratin, type II cytoskeletal 5 (Cytokeratin 5) (K5) (CK 5) (58 kDa cytokeratin), transcript variant 18 (LOC486522), mRNA Length = 3131 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 223 gctgctgatgatggagatgctg 244 |||||||||||||||||||||| Sbjct: 1380 gctgctgatgatggagatgctg 1359
>ref|XM_543648.2| PREDICTED: Canis familiaris similar to Keratin, type II cytoskeletal 5 (Cytokeratin 5) (K5) (CK 5) (58 kDa cytokeratin), transcript variant 1 (LOC486522), mRNA Length = 2639 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 223 gctgctgatgatggagatgctg 244 |||||||||||||||||||||| Sbjct: 1380 gctgctgatgatggagatgctg 1359
>ref|XM_855095.1| PREDICTED: Canis familiaris similar to Keratin, type II cytoskeletal 5 (Cytokeratin 5) (K5) (CK 5) (58 kDa cytokeratin), transcript variant 16 (LOC486522), mRNA Length = 3271 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 223 gctgctgatgatggagatgctg 244 |||||||||||||||||||||| Sbjct: 1380 gctgctgatgatggagatgctg 1359
>ref|XM_855013.1| PREDICTED: Canis familiaris similar to Keratin, type II cytoskeletal 5 (Cytokeratin 5) (K5) (CK 5) (58 kDa cytokeratin), transcript variant 14 (LOC486522), mRNA Length = 3286 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 223 gctgctgatgatggagatgctg 244 |||||||||||||||||||||| Sbjct: 1380 gctgctgatgatggagatgctg 1359
>ref|XM_854944.1| PREDICTED: Canis familiaris similar to Keratin, type II cytoskeletal 5 (Cytokeratin 5) (K5) (CK 5) (58 kDa cytokeratin), transcript variant 12 (LOC486522), mRNA Length = 2368 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 223 gctgctgatgatggagatgctg 244 |||||||||||||||||||||| Sbjct: 1380 gctgctgatgatggagatgctg 1359
>ref|XM_854908.1| PREDICTED: Canis familiaris similar to Keratin, type II cytoskeletal 5 (Cytokeratin 5) (K5) (CK 5) (58 kDa cytokeratin), transcript variant 11 (LOC486522), mRNA Length = 3187 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 223 gctgctgatgatggagatgctg 244 |||||||||||||||||||||| Sbjct: 1380 gctgctgatgatggagatgctg 1359
>ref|XM_854761.1| PREDICTED: Canis familiaris similar to Keratin, type II cytoskeletal 5 (Cytokeratin 5) (K5) (CK 5) (58 kDa cytokeratin), transcript variant 7 (LOC486522), mRNA Length = 2868 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 223 gctgctgatgatggagatgctg 244 |||||||||||||||||||||| Sbjct: 1380 gctgctgatgatggagatgctg 1359
>ref|XM_854730.1| PREDICTED: Canis familiaris similar to Keratin, type II cytoskeletal 5 (Cytokeratin 5) (K5) (CK 5) (58 kDa cytokeratin), transcript variant 6 (LOC486522), mRNA Length = 1578 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 223 gctgctgatgatggagatgctg 244 |||||||||||||||||||||| Sbjct: 1380 gctgctgatgatggagatgctg 1359
>ref|XM_854630.1| PREDICTED: Canis familiaris similar to Keratin, type II cytoskeletal 5 (Cytokeratin 5) (K5) (CK 5) (58 kDa cytokeratin), transcript variant 3 (LOC486522), mRNA Length = 3283 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 223 gctgctgatgatggagatgctg 244 |||||||||||||||||||||| Sbjct: 1380 gctgctgatgatggagatgctg 1359
>gb|AC138739.8| Mus musculus chromosome 9, clone RP23-380A10, complete sequence Length = 217813 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 251 atggagatgtagatgctgcaga 272 |||||||||||||||||||||| Sbjct: 73098 atggagatgtagatgctgcaga 73119
>emb|BX041769.1|CNS094E5 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC13BF06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 851 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 221 atgctgctgatgatggagatgctgctgctg 250 |||||| ||||||||| ||||||||||||| Sbjct: 453 atgctgatgatgatggcgatgctgctgctg 482
>emb|BX041768.1|CNS094E4 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC13BF06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 949 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Minus Query: 221 atgctgctgatgatggagatgctgctgctg 250 |||||| ||||||||| ||||||||||||| Sbjct: 502 atgctgatgatgatggcgatgctgctgctg 473
>emb|BX005022.7| Zebrafish DNA sequence from clone DKEY-6N21 in linkage group 7, complete sequence Length = 217582 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 209 aattttttcttgatgctgctgatgat 234 ||||||||||||||||| |||||||| Sbjct: 13765 aattttttcttgatgctcctgatgat 13790
>emb|AL807778.10| Mouse DNA sequence from clone RP23-198G1 on chromosome 2, complete sequence Length = 203518 Score = 44.1 bits (22), Expect = 0.40 Identities = 36/40 (90%), Gaps = 3/40 (7%) Strand = Plus / Plus Query: 224 ctgctgatgatggagatg---ctgctgctgatggagatgt 260 |||||| ||||||||||| ||||||||||||||||||| Sbjct: 55210 ctgctgctgatggagatgtctctgctgctgatggagatgt 55249
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 274 ggcgatggagaccaggatgctgact 298 |||||||||||||||||||| |||| Sbjct: 1361582 ggcgatggagaccaggatgccgact 1361558
>gb|AC107823.11| Mus musculus chromosome 8, clone RP23-184K1, complete sequence Length = 190966 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 aataaaaataggtctaccaca 25 ||||||||||||||||||||| Sbjct: 7165 aataaaaataggtctaccaca 7145
>gb|AC007928.7| Drosophila melanogaster clone BACR04O02, complete sequence Length = 176395 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 114 cgttgctgatgaaatgcgcaa 134 ||||||||||||||||||||| Sbjct: 66330 cgttgctgatgaaatgcgcaa 66350
>ref|XM_419682.1| PREDICTED: Gallus gallus similar to mitochondrial translational release factor 1-like (LOC421643), mRNA Length = 1740 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 agaggaagaaaacaaaaagag 331 ||||||||||||||||||||| Sbjct: 1254 agaggaagaaaacaaaaagag 1274
>gb|AC141565.3| Mus musculus BAC clone RP23-160M21 from chromosome 14, complete sequence Length = 210128 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 aagcagatgcaaagaaactgg 406 ||||||||||||||||||||| Sbjct: 5537 aagcagatgcaaagaaactgg 5557
>gb|AC159994.7| Mus musculus chromosome 7, clone RP23-368F23, complete sequence Length = 181238 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 gatggagatgctgctgctgat 252 ||||||||||||||||||||| Sbjct: 145607 gatggagatgctgctgctgat 145627
>gb|AC161884.5| Mus musculus BAC clone RP23-77K23 from chromosome 14, complete sequence Length = 243730 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 aagcagatgcaaagaaactgg 406 ||||||||||||||||||||| Sbjct: 212144 aagcagatgcaaagaaactgg 212164
>gb|AC107798.10| Mus musculus chromosome 8, clone RP23-4D24, complete sequence Length = 234420 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 aataaaaataggtctaccaca 25 ||||||||||||||||||||| Sbjct: 215472 aataaaaataggtctaccaca 215452
>ref|XM_757360.1| Ustilago maydis 521 hypothetical protein (UM06306.1) partial mRNA Length = 4104 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 240 tgctgctgctgatggagatgtagatgctg 268 |||||||||||||| ||||| |||||||| Sbjct: 3962 tgctgctgctgatgcagatgcagatgctg 3934
>gb|AC117262.2| Mus musculus BAC clone RP24-537M7 from 2, complete sequence Length = 156547 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 310 gagaggaagaaaacaaaaagagtta 334 ||||||||||||| ||||||||||| Sbjct: 108442 gagaggaagaaaagaaaaagagtta 108418
>emb|AL512449.6| Human DNA sequence from clone RP11-286E7 on chromosome 1 Contains part of the RPS6KC1 gene for ribosomal protein S6 kinase 52kDa polypeptide 1 and a CpG island, complete sequence Length = 176690 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 308 gagagaggaagaaaacaaaaagagt 332 ||||||||||||||| ||||||||| Sbjct: 69741 gagagaggaagaaaagaaaaagagt 69717
>emb|AL139259.15| Human DNA sequence from clone RP5-861H2 on chromosome 1q41 Contains part of a novel gene, complete sequence Length = 28489 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 213 ttttcttgatgctgctgatga 233 ||||||||||||||||||||| Sbjct: 15989 ttttcttgatgctgctgatga 16009
>gb|AY305027.1| Halichoeres tenuispinis estrogen receptor beta mRNA, complete cds Length = 2195 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 gatgatggagatgctgctgctgatg 253 |||||||||| |||||||||||||| Sbjct: 573 gatgatggagctgctgctgctgatg 549
>emb|X55735.1|DPBCD D.pseudoobscura bcd (bicoid) gene involved in anterior positional specification during embryogenesis Length = 3476 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 1524 tgctgctgctgatggagctgctgctgctg 1496
>emb|AL591064.11| Mouse DNA sequence from clone RP23-395E18 on chromosome 2, complete sequence Length = 200078 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||| |||||||||| ||||||||||||| Sbjct: 70125 tgctcctgatgatggtgatgctgctgctg 70097
>gb|AC023741.4| Drosophila melanogaster X BAC RP98-23O9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160440 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 222 tgctgctgatgatggagatgctgctgctgatgg 254 |||||||||||||| | ||||||||||||||| Sbjct: 90146 tgctgctgatgatgttgctgctgctgctgatgg 90178
>gb|AC104627.8| Drosophila melanogaster X BAC RP98-4A11 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 187921 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 222 tgctgctgatgatggagatgctgctgctgatgg 254 |||||||||||||| | ||||||||||||||| Sbjct: 25340 tgctgctgatgatgttgctgctgctgctgatgg 25372
>gb|AC010054.7| Drosophila melanogaster 3L BAC RP98-15E10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 173109 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 222 tgctgctgatgatggagatgctgctgctg 250 ||||||||||||||| | ||||||||||| Sbjct: 96733 tgctgctgatgatggtggtgctgctgctg 96761
>ref|NM_167335.1| Drosophila melanogaster Smrter CG4013-RC, transcript variant C (Smr), mRNA Length = 13475 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctgatgg 254 |||||||||||||| | ||||||||||||||| Sbjct: 1581 tgctgctgatgatgttgctgctgctgctgatgg 1549
>ref|NM_167334.1| Drosophila melanogaster Smrter CG4013-RB, transcript variant B (Smr), mRNA Length = 12702 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctgatgg 254 |||||||||||||| | ||||||||||||||| Sbjct: 808 tgctgctgatgatgttgctgctgctgctgatgg 776
>ref|NM_140744.1| Drosophila melanogaster TORC CG6064-RA (TORC), mRNA Length = 2992 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 ||||||||||||||| | ||||||||||| Sbjct: 1955 tgctgctgatgatggtggtgctgctgctg 1927
>gb|AF375008.1| Oncorhynchus mykiss microsatellite OMM1004 sequence Length = 698 Score = 42.1 bits (21), Expect = 1.6 Identities = 32/35 (91%), Gaps = 3/35 (8%) Strand = Plus / Plus Query: 219 tgatgctgctgatgatggagatgctgctgctgatg 253 |||||||||||||||| |||||||||||||||| Sbjct: 141 tgatgctgctgatgat---gatgctgctgctgatg 172
>gb|AF450964.1| Drosophila miranda strain Mather28 bicoid (bcd) gene, partial cds Length = 1369 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 752 tgctgctgctgatggagctgctgctgctg 724
>gb|AF450963.1| Drosophila miranda strain MSH38 bicoid (bcd) gene, partial cds Length = 1369 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 752 tgctgctgctgatggagctgctgctgctg 724
>gb|AF450962.1| Drosophila persimilis strain Salem bicoid (bcd) gene, partial cds Length = 1378 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450961.1| Drosophila persimilis strain MSH7 bicoid (bcd) gene, partial cds Length = 1387 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 758 tgctgctgctgatggagctgctgctgctg 730
>gb|AF450960.1| Drosophila persimilis strain MSH3 bicoid (bcd) gene, partial cds Length = 1378 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450959.1| Drosophila persimilis strain MSH1 bicoid (bcd) gene, partial cds Length = 1378 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450958.1| Drosophila persimilis strain MSH42 bicoid (bcd) gene, partial cds Length = 1378 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450957.1| Drosophila persimilis strain MSH25 bicoid (bcd) gene, partial cds Length = 1378 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450956.1| Drosophila persimilis strain MatherB bicoid (bcd) gene, partial cds Length = 1378 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450955.1| Drosophila persimilis strain MatherG bicoid (bcd) gene, partial cds Length = 1378 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450953.1| Drosophila persimilis strain Mather37 bicoid (bcd) gene, partial cds Length = 1378 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450952.1| Drosophila persimilis strain Mather41 bicoid (bcd) gene, partial cds Length = 1384 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450951.1| Drosophila persimilis strain Mather27 bicoid (bcd) gene, partial cds Length = 1378 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450950.1| Drosophila persimilis strain Mather6 bicoid (bcd) gene, partial cds Length = 1378 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450949.1| Drosophila persimilis strain Mather40 bicoid (bcd) gene, partial cds Length = 1378 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450948.1| Drosophila pseudoobscura bogotana strain Potosi3 bicoid (bcd) gene, partial cds Length = 1372 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450947.1| Drosophila pseudoobscura bogotana strain Potosi2 bicoid (bcd) gene, partial cds Length = 1378 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450946.1| Drosophila pseudoobscura bogotana strain Toro4 bicoid (bcd) gene, partial cds Length = 1378 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450945.1| Drosophila pseudoobscura bogotana strain Toro6 bicoid (bcd) gene, partial cds Length = 1363 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450944.1| Drosophila pseudoobscura bogotana strain Toro7 bicoid (bcd) gene, partial cds Length = 1372 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450943.1| Drosophila pseudoobscura bogotana strain Toro1 bicoid (bcd) gene, partial cds Length = 1372 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450942.1| Drosophila pseudoobscura bogotana strain Sutatausa3 bicoid (bcd) gene, partial cds Length = 1372 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450941.1| Drosophila pseudoobscura bogotana strain Sutatausa2 bicoid (bcd) gene, partial cds Length = 1372 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450940.1| Drosophila pseudoobscura bogotana strain Sutatausa5 bicoid (bcd) gene, partial cds Length = 1372 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450939.1| Drosophila pseudoobscura bogotana strain Sutatausa1 bicoid (bcd) gene, partial cds Length = 1372 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450938.1| Drosophila pseudoobscura bogotana strain Susa2 bicoid (bcd) gene, partial cds Length = 1372 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450937.1| Drosophila pseudoobscura bogotana strain Susa1 bicoid (bcd) gene, partial cds Length = 1372 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450936.1| Drosophila pseudoobscura bogotana strain Susa6 bicoid (bcd) gene, partial cds Length = 1372 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450935.1| Drosophila pseudoobscura bogotana strain Susa3 bicoid (bcd) gene, partial cds Length = 1372 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450934.1| Drosophila pseudoobscura strain MSH21 bicoid (bcd) gene, partial cds Length = 1378 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450933.1| Drosophila pseudoobscura strain MSH24 bicoid (bcd) gene, partial cds Length = 1378 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450932.1| Drosophila pseudoobscura strain MSH32 bicoid (bcd) gene, partial cds Length = 1381 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 752 tgctgctgctgatggagctgctgctgctg 724
>gb|AF450931.1| Drosophila pseudoobscura strain MSH9 bicoid (bcd) gene, partial cds Length = 1378 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450930.1| Drosophila pseudoobscura strain MSH10 bicoid (bcd) gene, partial cds Length = 1378 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450928.1| Drosophila pseudoobscura strain Mather48 bicoid (bcd) gene, partial cds Length = 1375 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450927.1| Drosophila pseudoobscura strain Mather32 bicoid (bcd) gene, partial cds Length = 1378 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450926.1| Drosophila pseudoobscura strain Mather17 bicoid (bcd) gene, partial cds Length = 1378 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450925.1| Drosophila pseudoobscura strain Mather10 bicoid (bcd) gene, partial cds Length = 1378 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450924.1| Drosophila pseudoobscura strain Flagstaff18 bicoid (bcd) gene, partial cds Length = 1372 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450923.1| Drosophila pseudoobscura strain Flagstaff16 bicoid (bcd) gene, partial cds Length = 1372 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450922.1| Drosophila pseudoobscura strain Flagstaff14 bicoid (bcd) gene, partial cds Length = 1378 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450921.1| Drosophila pseudoobscura strain Flagstaff6 bicoid (bcd) gene, partial cds Length = 1366 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450919.1| Drosophila pseudoobscura strain AFC12 bicoid (bcd) gene, partial cds Length = 1378 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450918.1| Drosophila pseudoobscura strain AFC7 bicoid (bcd) gene, partial cds Length = 1372 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450917.1| Drosophila pseudoobscura strain AFC3 bicoid (bcd) gene, partial cds Length = 1372 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AF450916.1| Drosophila pseudoobscura strain AF2 bicoid (bcd) gene, partial cds Length = 1369 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 752 tgctgctgctgatggagctgctgctgctg 724
>gb|AF450915.1| Drosophila pseudoobscura strain Abajo36 bicoid (bcd) gene, partial cds Length = 1372 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 749 tgctgctgctgatggagctgctgctgctg 721
>gb|AC009375.8| Drosophila melanogaster 3L BAC RP98-44L18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 180787 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 222 tgctgctgatgatggagatgctgctgctg 250 ||||||||||||||| | ||||||||||| Sbjct: 11380 tgctgctgatgatggtggtgctgctgctg 11408
>ref|NM_080536.2| Drosophila melanogaster Smrter CG4013-RA, transcript variant A (Smr), mRNA Length = 12622 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctgatgg 254 |||||||||||||| | ||||||||||||||| Sbjct: 728 tgctgctgatgatgttgctgctgctgctgatgg 696
>gb|AC011454.6|AC011454 Homo sapiens chromosome 19 clone CTC-347E6, complete sequence Length = 163120 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 219 tgatgctgctgatgatggagatgctgctg 247 |||||||||||||||||| |||| ||||| Sbjct: 129822 tgatgctgctgatgatggtgatgatgctg 129850
>gb|AF320180.1|AF320180 Drosophila miranda strain MSH38 bicoid (bcd) gene, partial cds Length = 60 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 53 tgctgctgctgatggagctgctgctgctg 25
>gb|AF320179.1|AF320179 Drosophila persimilis strain MatherB bicoid (bcd) gene, partial cds Length = 57 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 50 tgctgctgctgatggagctgctgctgctg 22
>gb|AF320178.1|AF320178 Drosophila persimilis strain Mather27 bicoid (bcd) gene, partial cds Length = 57 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 50 tgctgctgctgatggagctgctgctgctg 22
>gb|AF320177.1|AF320177 Drosophila persimilis strain Salem bicoid (bcd) gene, partial cds Length = 57 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 50 tgctgctgctgatggagctgctgctgctg 22
>gb|AF320176.1|AF320176 Drosophila persimilis strain MSH25 bicoid (bcd) gene, partial cds Length = 57 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 50 tgctgctgctgatggagctgctgctgctg 22
>gb|AF320175.1|AF320175 Drosophila persimilis strain MSH3 bicoid (bcd) gene, partial cds Length = 57 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 50 tgctgctgctgatggagctgctgctgctg 22
>gb|AF320174.1|AF320174 Drosophila persimilis strain Mather40 bicoid (bcd) gene, partial cds Length = 57 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 50 tgctgctgctgatggagctgctgctgctg 22
>gb|AF320173.1|AF320173 Drosophila persimilis strain Mather6 bicoid (bcd) gene, partial cds Length = 57 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 50 tgctgctgctgatggagctgctgctgctg 22
>gb|AF320172.1|AF320172 Drosophila pseudoobscura strain Mather48 bicoid (bcd) gene, partial cds Length = 57 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 50 tgctgctgctgatggagctgctgctgctg 22
>gb|AF320171.1|AF320171 Drosophila pseudoobscura strain Mather32 bicoid (bcd) gene, partial cds Length = 57 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 50 tgctgctgctgatggagctgctgctgctg 22
>gb|AF320170.1|AF320170 Drosophila pseudoobscura strain Mather17 bicoid (bcd) gene, partial cds Length = 57 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 50 tgctgctgctgatggagctgctgctgctg 22
>gb|AF320169.1|AF320169 Drosophila pseudoobscura strain Mather10 bicoid (bcd) gene, partial cds Length = 57 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 50 tgctgctgctgatggagctgctgctgctg 22
>gb|AF320168.1|AF320168 Drosophila pseudoobscura strain AF2 bicoid (bcd) gene, partial cds Length = 60 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 53 tgctgctgctgatggagctgctgctgctg 25
>gb|AF320167.1|AF320167 Drosophila pseudoobscura strain Abajo36 bicoid (bcd) gene, partial cds Length = 60 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 53 tgctgctgctgatggagctgctgctgctg 25
>gb|AC020754.4|AC020754 Homo sapiens chromosome 3 clone RP11-37I4 map 3p, complete sequence Length = 161612 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 268 gcagaaggcgatggagaccag 288 ||||||||||||||||||||| Sbjct: 145816 gcagaaggcgatggagaccag 145836
>gb|AC097628.2| Takifugu rubripes clone 264E2, complete sequence Length = 88203 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 222 tgctgctgatgatggagatgctgctgctg 250 ||||||||||| ||||| ||||||||||| Sbjct: 73887 tgctgctgatggtggagctgctgctgctg 73915
>gb|AY754446.1| Drosophila affinis bicoid (bcd) gene, exons 2, 3 and partial cds Length = 1132 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 666 tgctgctgctgatggagttgctgctgctg 638
>gb|AY754445.1| Drosophila miranda strain MSH38 bicoid (bcd) gene, exons 2, 3 and partial cds Length = 1110 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 662 tgctgctgctgatggagctgctgctgctg 634
>gb|AY754444.1| Drosophila miranda strain MSH22 bicoid (bcd) gene, exons 2, 3 and partial cds Length = 1109 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 661 tgctgctgctgatggagctgctgctgctg 633
>gb|AY754443.1| Drosophila miranda strain SP235 bicoid (bcd) gene, exons 2, 3 and partial cds Length = 1115 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 661 tgctgctgctgatggagctgctgctgctg 633
>gb|AY754442.1| Drosophila miranda strain SP138 bicoid (bcd) gene, exons 2, 3 and partial cds Length = 1115 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 661 tgctgctgctgatggagctgctgctgctg 633
>gb|AY754441.1| Drosophila miranda strain MA32 bicoid (bcd) gene, exons 2, 3 and partial cds Length = 1115 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 661 tgctgctgctgatggagctgctgctgctg 633
>gb|AY754440.1| Drosophila miranda strain MA28 bicoid (bcd) gene, exons 2, 3 and partial cds Length = 1115 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 661 tgctgctgctgatggagctgctgctgctg 633
>gb|AY754439.1| Drosophila miranda strain 0101.9 bicoid (bcd) gene, exons 2, 3 and partial cds Length = 1115 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 661 tgctgctgctgatggagctgctgctgctg 633
>gb|AY754438.1| Drosophila miranda strain 0101.7 bicoid (bcd) gene, exons 2, 3 and partial cds Length = 1116 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 662 tgctgctgctgatggagctgctgctgctg 634
>gb|AY754437.1| Drosophila miranda strain 0101.5 bicoid (bcd) gene, exons 2, 3 and partial cds Length = 1116 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 662 tgctgctgctgatggagctgctgctgctg 634
>gb|AY754436.1| Drosophila miranda strain 0101.4 bicoid (bcd) gene, exons 2, 3 and partial cds Length = 1115 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 661 tgctgctgctgatggagctgctgctgctg 633
>gb|AY754435.1| Drosophila miranda strain 0101.3 bicoid (bcd) gene, exons 2, 3 and partial cds Length = 1115 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 661 tgctgctgctgatggagctgctgctgctg 633
>gb|AY754434.1| Drosophila pseudoobscura bicoid (bcd) gene, exons 2, 3 and partial cds Length = 1110 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||| |||||||| ||||||||||| Sbjct: 659 tgctgctgctgatggagctgctgctgctg 631
>emb|BX663609.29| Zebrafish DNA sequence from clone DKEY-182H7 in linkage group 7, complete sequence Length = 248960 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 222 tgctgctgatgatggagatgctgctgctg 250 |||||||||||||| ||||||||||||| Sbjct: 119547 tgctgctgatgatgatgatgctgctgctg 119575
>gb|AE003705.3| Drosophila melanogaster chromosome 3R, section 43 of 118 of the complete sequence Length = 216741 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 cgttgctgatgaaatgcgcaa 134 ||||||||||||||||||||| Sbjct: 18754 cgttgctgatgaaatgcgcaa 18734
>gb|AE003523.3| Drosophila melanogaster chromosome 3L, section 62 of 83 of the complete sequence Length = 290640 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 222 tgctgctgatgatggagatgctgctgctg 250 ||||||||||||||| | ||||||||||| Sbjct: 175627 tgctgctgatgatggtggtgctgctgctg 175655
>gb|AE003490.3| Drosophila melanogaster chromosome X, section 42 of 74 of the complete sequence Length = 302665 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 222 tgctgctgatgatggagatgctgctgctgatgg 254 |||||||||||||| | ||||||||||||||| Sbjct: 107267 tgctgctgatgatgttgctgctgctgctgatgg 107299
>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome Length = 2902619 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 251 atggagatgtagatgctgcag 271 ||||||||||||||||||||| Sbjct: 159211 atggagatgtagatgctgcag 159191
>dbj|AP001972.4| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2562J17, complete sequences Length = 215225 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 agagaggaagaaaacaaaaag 329 ||||||||||||||||||||| Sbjct: 175179 agagaggaagaaaacaaaaag 175199
>gb|DQ314865.1| Homo sapiens arrestin, beta 1 (ARRB1) gene, complete cds Length = 89549 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 agagaggaagaaaacaaaaag 329 ||||||||||||||||||||| Sbjct: 81579 agagaggaagaaaacaaaaag 81559
>gb|AC140409.3| Mus musculus BAC clone RP23-138K22 from 9, complete sequence Length = 200157 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 219 tgatgctgctgatgatggagatgctgctgctgatggagatg 259 ||||| |||||||||||| |||| ||||| |||||| |||| Sbjct: 102383 tgatgatgctgatgatggtgatgatgctgatgatggtgatg 102343 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 219 tgatgctgctgatgatggagatgctgctgctgatggagatg 259 ||||| |||||||||||| |||| ||||| |||||| |||| Sbjct: 102365 tgatgatgctgatgatggtgatgatgctgatgatggtgatg 102325
>gb|AC090955.3| Homo sapiens chromosome 3 clone RP11-622A14 map 3p, complete sequence Length = 209168 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 268 gcagaaggcgatggagaccag 288 ||||||||||||||||||||| Sbjct: 82022 gcagaaggcgatggagaccag 82042
>emb|AL845161.5| Mouse DNA sequence from clone RP23-214I20 on chromosome 2, complete sequence Length = 233212 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 aggaagaaaacaaaaagagtt 333 ||||||||||||||||||||| Sbjct: 104425 aggaagaaaacaaaaagagtt 104445
>emb|AL928639.5| Mouse DNA sequence from clone RP23-446O17 on chromosome 2, complete sequence Length = 177843 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 310 gagaggaagaaaacaaaaagagtta 334 ||||||||||||| ||||||||||| Sbjct: 158857 gagaggaagaaaagaaaaagagtta 158881
>emb|X97283.1|GCINTALPH G.cydonium mRNA for integrin alpha subunit Length = 3546 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 291 tgctgactctctaactggagagagg 315 |||||||||||| |||||||||||| Sbjct: 2242 tgctgactctctgactggagagagg 2266
>gb|AC021999.5| Homo sapiens chromosome 3 clone RP11-129J10 map 3p, complete sequence Length = 153152 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 268 gcagaaggcgatggagaccag 288 ||||||||||||||||||||| Sbjct: 137349 gcagaaggcgatggagaccag 137369
>gb|AY830454.1| Petromyzon marinus SoxF (SoxF) mRNA, complete cds Length = 1805 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctgatg 253 |||||||| ||||| |||||||||||||||| Sbjct: 1191 tgctgctgctgatgatgatgctgctgctgatg 1160
>gb|AC159998.6| Mus musculus BAC clone RP24-576J22 from chromosome 10, complete sequence Length = 166313 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 225 tgctgatgatggagatgctgctgctgatggagatgtagatgctg 268 ||||||||||| |||| || |||||||| ||||||||||||| Sbjct: 72195 tgctgatgatgctgatggtgatgctgatgaggatgtagatgctg 72238
>gb|AC006259.1| Arabidopsis thaliana BAC F21J6 from chromosome V, containing KNAT3 and mapping near 60.5 cM, complete sequence Length = 110680 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 agagaggaagaaaacaaaaa 328 |||||||||||||||||||| Sbjct: 15872 agagaggaagaaaacaaaaa 15853
>gb|AE014832.1| Plasmodium falciparum 3D7 chromosome 10 section 4 of 7 of the complete sequence Length = 258658 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 aagaaaacaaaaagagttac 335 |||||||||||||||||||| Sbjct: 150460 aagaaaacaaaaagagttac 150441
>gb|AC005964.1| Arabidopsis thaliana chromosome V map 60.5 cM, complete sequence Length = 91916 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 agagaggaagaaaacaaaaa 328 |||||||||||||||||||| Sbjct: 83273 agagaggaagaaaacaaaaa 83254
>ref|XM_368359.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00885.4) partial mRNA Length = 2445 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 219 tgatgctgctgatgatggagatgctgctgctg 250 |||||||||||||| || || ||||||||||| Sbjct: 1469 tgatgctgctgatgttgaagctgctgctgctg 1438
>gb|AC134348.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0530H10, complete sequence Length = 148373 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 305 ctggagagaggaagaaaacaaaaa 328 ||||||||| |||||||||||||| Sbjct: 25872 ctggagagaagaagaaaacaaaaa 25849
>ref|XM_453868.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D18238g predicted mRNA Length = 1437 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 agaaactggaagttctttca 417 |||||||||||||||||||| Sbjct: 361 agaaactggaagttctttca 380
>gb|AY176327.1| Staphylococcus phage K, complete genome Length = 127395 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gcttaataaaaataggtcta 20 |||||||||||||||||||| Sbjct: 96556 gcttaataaaaataggtcta 96575
>ref|XM_549330.2| PREDICTED: Canis familiaris similar to CG1 protein (F18) (LOC492210), mRNA Length = 2490 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 219 tgatgctgctgatgatggagatgctgctgctg 250 |||||||||||||| || ||||||||||||| Sbjct: 1706 tgatgctgctgatgctgctgatgctgctgctg 1675
>gb|AC132378.3| Mus musculus BAC clone RP23-407N22 from chromosome 18, complete sequence Length = 207683 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 aattttttcttgatgctgct 228 |||||||||||||||||||| Sbjct: 134584 aattttttcttgatgctgct 134565
>gb|AC113031.11| Mus musculus chromosome 14, clone RP23-220B20, complete sequence Length = 250215 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 acagaagcagatgcaaagaa 401 |||||||||||||||||||| Sbjct: 70511 acagaagcagatgcaaagaa 70530
>emb|CR954256.1| Anopheles gambiae Pen-1 region; BAC clones 30N20, 10K02, 13E09, 31J16 and 01G10 from library NotreDame1 of Anopheles gambiae (African malaria mosquito) strain PEST Length = 447895 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 219 tgatgctgctgatgatggagatgctgct 246 ||||||||||||||||| ||||||||| Sbjct: 393258 tgatgctgctgatgatgatgatgctgct 393231
>gb|AC137948.12| Mus musculus chromosome 1, clone RP23-393D20, complete sequence Length = 233077 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 401 aactggaagttctttcaaagcaaa 424 |||||||| ||||||||||||||| Sbjct: 201773 aactggaacttctttcaaagcaaa 201796
>ref|XM_815541.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053506599.50) partial mRNA Length = 1155 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 gctgctgctgatggagatgt 260 |||||||||||||||||||| Sbjct: 73 gctgctgctgatggagatgt 92
>ref|XM_815553.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053506599.330) partial mRNA Length = 1281 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 gctgctgctgatggagatgt 260 |||||||||||||||||||| Sbjct: 73 gctgctgctgatggagatgt 92
>gb|AC121791.3| Mus musculus BAC clone RP23-401H19 from chromosome 14, complete sequence Length = 197720 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctgatg 253 |||||||| ||||| |||||||||||||||| Sbjct: 94254 tgctgctgttgatgatgatgctgctgctgatg 94223
>gb|AY225852.2| Ctenopharyngodon idella CBP/p300-interacting transactivator (cited3) mRNA, complete cds Length = 1585 Score = 40.1 bits (20), Expect = 6.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 218 ttgatgctgctgatgatggagatgctgctgctgatg 253 |||||||||||| ||||| | |||||||||||||| Sbjct: 478 ttgatgctgctgctgatgctgctgctgctgctgatg 443
>ref|XM_950044.1| Theileria annulata strain Ankara hypothetical protein (TA04620) partial mRNA Length = 2850 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 gaaaacaaaaagagttacga 337 |||||||||||||||||||| Sbjct: 2019 gaaaacaaaaagagttacga 2038
>gb|AY060464.1| Drosophila melanogaster SD04616 full insert cDNA Length = 4295 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 219 tgatgctgctgatgatggagatgctgctgctg 250 |||||||||||||| || ||||||||||||| Sbjct: 580 tgatgctgctgatgctgctgatgctgctgctg 549
>gb|AC136716.12| Mus musculus, clone RP23-42E21, complete sequence Length = 259603 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 agagaggaagaaaacaaaaa 328 |||||||||||||||||||| Sbjct: 128812 agagaggaagaaaacaaaaa 128793
>emb|AL391989.9| Human DNA sequence from clone RP11-388E20 on chromosome 13 Contains a ribosomal protein L31 (RPL31) pseudogene, complete sequence Length = 167496 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 atgctgctgatgatggagat 240 |||||||||||||||||||| Sbjct: 88664 atgctgctgatgatggagat 88645
>gb|BT010312.1| Drosophila melanogaster AT29286 full insert cDNA Length = 4932 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgct 249 |||||||||||||| || |||||||||| Sbjct: 4302 tgctgctgatgatgaagctgctgctgct 4275
>emb|AL353700.14| Human DNA sequence from clone RP3-350J21 on chromosome 6 Contains part of the DNAH8 gene for dynein axonemal heavy polypeptide 8 and the 5' part of a novel gene, complete sequence Length = 56509 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 tgatggagatgctgctgctg 250 |||||||||||||||||||| Sbjct: 52803 tgatggagatgctgctgctg 52784
>gb|AC023714.5| Drosophila melanogaster X BAC RP98-19D19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160100 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctgatg 253 ||||||||||| || || |||||||||||||| Sbjct: 38795 tgctgctgatgctgcagctgctgctgctgatg 38764
>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1715506 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 agaaactggaagttctttca 417 |||||||||||||||||||| Sbjct: 1540059 agaaactggaagttctttca 1540078
>gb|AC132401.4| Mus musculus BAC clone RP23-404A8 from chromosome 3, complete sequence Length = 200657 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 222 tgctgctgatgatggagatgctgctgctgatg 253 |||||||||||||| |||||||||| ||||| Sbjct: 167959 tgctgctgatgatgatgatgctgctgatgatg 167990
>emb|AJ308118.2|LFL308118 Lampetra fluviatilis mRNA for type I keratin 18 Length = 2508 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctgatg 253 |||||||||||||| |||||||||| ||||| Sbjct: 60 tgctgctgatgatgatgatgctgctgatgatg 29
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 234 tggagatgctgctgctgatggaga 257 ||||||||||| |||||||||||| Sbjct: 4682869 tggagatgctgttgctgatggaga 4682846
>gb|AC104626.3| Drosophila melanogaster X BAC RP98-28L7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 184454 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 219 tgatgctgctgatgatggagatgctgctgctg 250 ||||||| |||||| || |||||||||||||| Sbjct: 15648 tgatgcttctgatgctgcagatgctgctgctg 15679
>gb|AC010557.4| Drosophila melanogaster 3L BAC RP98-9E21 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 169425 Score = 40.1 bits (20), Expect = 6.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 219 tgatgctgctgatgatggagatgctgctgctgatgg 254 ||||||||||| ||||| |||| |||||||||||| Sbjct: 117937 tgatgctgctgctgatgctgatgttgctgctgatgg 117902
>gb|AY119550.1| Drosophila melanogaster GH27233 full insert cDNA Length = 3796 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgct 249 |||||||||||||| || |||||||||| Sbjct: 3361 tgctgctgatgatgaagctgctgctgct 3334
>gb|AY119466.1| Drosophila melanogaster GH03957 full insert cDNA Length = 4347 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgct 249 |||||||||||||| || |||||||||| Sbjct: 3310 tgctgctgatgatgaagctgctgctgct 3283
>gb|AC104510.6| Drosophila melanogaster X BAC RP98-26J12 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 168583 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 219 tgatgctgctgatgatggagatgctgctgctg 250 ||||||| |||||| || |||||||||||||| Sbjct: 158295 tgatgcttctgatgctgcagatgctgctgctg 158326
>ref|NM_206288.1| Drosophila melanogaster CG33277-PA (CG33277) mRNA, complete cds Length = 1215 Score = 40.1 bits (20), Expect = 6.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 219 tgatgctgctgatgatggagatgctgctgctgatgg 254 ||||||||||| ||||| |||| |||||||||||| Sbjct: 977 tgatgctgctgctgatgctgatgttgctgctgatgg 942
>ref|NM_206622.2| Drosophila melanogaster CG32776-RB, transcript variant B (CG32776), mRNA Length = 3981 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctgatg 253 ||||||||||| || || |||||||||||||| Sbjct: 746 tgctgctgatgctgcagctgctgctgctgatg 715
>ref|NM_206150.1| Drosophila melanogaster CG30460-RB, transcript variant B (CG30460), mRNA Length = 4790 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgct 249 |||||||||||||| || |||||||||| Sbjct: 3759 tgctgctgatgatgaagctgctgctgct 3732
>ref|NM_206149.1| Drosophila melanogaster CG30460-RA, transcript variant A (CG30460), mRNA Length = 5954 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgct 249 |||||||||||||| || |||||||||| Sbjct: 4923 tgctgctgatgatgaagctgctgctgct 4896
>ref|NM_206148.1| Drosophila melanogaster CG30460-RD, transcript variant D (CG30460), mRNA Length = 5111 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgct 249 |||||||||||||| || |||||||||| Sbjct: 4080 tgctgctgatgatgaagctgctgctgct 4053
>gb|AC067793.9| Homo sapiens chromosome 15, clone RP11-552D14, complete sequence Length = 189722 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 219 tgatgctgctgatgatggagatgctgctgctg 250 ||||| ||||||||||| ||||||||||||| Sbjct: 124071 tgatgatgctgatgatgctgatgctgctgctg 124102
>ref|NM_167277.1| Drosophila melanogaster CG11105-RA, transcript variant A (CG11105), mRNA Length = 1275 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 219 tgatgctgctgatgatggagatgctgctgctg 250 ||||||| |||||| || |||||||||||||| Sbjct: 395 tgatgcttctgatgctgcagatgctgctgctg 364
>ref|NM_137342.2| Drosophila melanogaster CG30460-RC, transcript variant C (CG30460), mRNA Length = 6491 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgct 249 |||||||||||||| || |||||||||| Sbjct: 5460 tgctgctgatgatgaagctgctgctgct 5433
>ref|NM_132471.1| Drosophila melanogaster CG11105-RB, transcript variant B (CG11105), mRNA Length = 1469 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 219 tgatgctgctgatgatggagatgctgctgctg 250 ||||||| |||||| || |||||||||||||| Sbjct: 589 tgatgcttctgatgctgcagatgctgctgctg 558
>ref|NM_057659.2| Drosophila melanogaster Dopamine receptor CG9652-RA (DopR), mRNA Length = 2538 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 228 tgatgatggagatgctgctgctgatgga 255 ||||||||| | |||||||||||||||| Sbjct: 522 tgatgatggtggtgctgctgctgatgga 495
>ref|NM_001038740.1| Drosophila melanogaster CG32776-RD, transcript variant D (CG32776), mRNA Length = 3984 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctgatg 253 ||||||||||| || || |||||||||||||| Sbjct: 746 tgctgctgatgctgcagctgctgctgctgatg 715
>gb|AC008631.6| Homo sapiens chromosome 5 clone CTB-163B16, complete sequence Length = 107857 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ggagagaggaagaaaacaaa 326 |||||||||||||||||||| Sbjct: 13676 ggagagaggaagaaaacaaa 13695
>gb|AC099032.1| Drosophila melanogaster, chromosome 2R, region 53F-54A, BAC clone BACR32P08, complete sequence Length = 163072 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 222 tgctgctgatgatggagatgctgctgct 249 |||||||||||||| || |||||||||| Sbjct: 74483 tgctgctgatgatgaagctgctgctgct 74510
>emb|AJ586737.2| Drosophila virilis partial mod(mdg4) gene Length = 24391 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 219 tgatgctgctgatgatggagatgctgctgctg 250 ||||| || ||||||||||| ||||||||||| Sbjct: 11234 tgatgatgatgatgatggagctgctgctgctg 11265
>emb|BX000999.9| Zebrafish DNA sequence from clone DKEY-77F5 in linkage group 15, complete sequence Length = 200989 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 atgtagatgctgcagaaggc 276 |||||||||||||||||||| Sbjct: 43719 atgtagatgctgcagaaggc 43700
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tggagatgctgctgctgatg 253 |||||||||||||||||||| Sbjct: 23390221 tggagatgctgctgctgatg 23390202
>gb|AC114738.4| Homo sapiens BAC clone CTD-2192M1 from 4, complete sequence Length = 134697 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 231 tgatggagatgctgctgctgatgg 254 |||||| ||||||||||||||||| Sbjct: 114964 tgatggtgatgctgctgctgatgg 114941
>gb|AC007904.6|AC007904 Drosophila melanogaster, chromosome 3R, region 88B-88B, BAC clone BACR01H04, complete sequence Length = 190325 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 228 tgatgatggagatgctgctgctgatgga 255 ||||||||| | |||||||||||||||| Sbjct: 94340 tgatgatggtggtgctgctgctgatgga 94367
>gb|AC095046.3| Homo sapiens BAC clone RP11-147K21 from 4, complete sequence Length = 156786 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 ataaaaataggtctaccaca 25 |||||||||||||||||||| Sbjct: 116921 ataaaaataggtctaccaca 116940
>gb|AC016759.11| Homo sapiens BAC clone RP11-535J8 from 2, complete sequence Length = 219574 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 agaggaagaaaacaaaaaga 330 |||||||||||||||||||| Sbjct: 4084 agaggaagaaaacaaaaaga 4103
>gb|AC154664.2| Mus musculus BAC clone RP24-284G3 from chromosome 14, complete sequence Length = 157658 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 acagaagcagatgcaaagaa 401 |||||||||||||||||||| Sbjct: 156198 acagaagcagatgcaaagaa 156217
>gb|AC093784.3| Homo sapiens BAC clone RP11-211K17 from 2, complete sequence Length = 165500 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 gatgatggagatgctgctgctgat 252 |||||||||||||||| ||||||| Sbjct: 19508 gatgatggagatgctgatgctgat 19531
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 gatgatggagatgctgctgc 248 |||||||||||||||||||| Sbjct: 892138 gatgatggagatgctgctgc 892157
>gb|AY954969.1| Bacteriophage G1, complete genome Length = 138715 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gcttaataaaaataggtcta 20 |||||||||||||||||||| Sbjct: 61734 gcttaataaaaataggtcta 61753
>gb|AC107209.4| Homo sapiens BAC clone RP11-4F12 from 2, complete sequence Length = 113078 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 agaggaagaaaacaaaaaga 330 |||||||||||||||||||| Sbjct: 34895 agaggaagaaaacaaaaaga 34914
>dbj|AP004399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0451G12 Length = 142182 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tggagatgctgctgctgatg 253 |||||||||||||||||||| Sbjct: 72058 tggagatgctgctgctgatg 72039
>gb|DQ020489.1| Sus scrofa clone BAC KNP_992H3, complete sequence Length = 121023 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 aattttttcttgatgctgct 228 |||||||||||||||||||| Sbjct: 17879 aattttttcttgatgctgct 17898
>dbj|AK106046.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-E07, full insert sequence Length = 1273 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 305 ctggagagaggaagaaaacaaaaa 328 ||||||||| |||||||||||||| Sbjct: 1057 ctggagagaagaagaaaacaaaaa 1034
>gb|AC154663.2| Mus musculus BAC clone RP24-283H12 from 16, complete sequence Length = 177341 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 219 tgatgctgctgatgatggagatgctgctgctg 250 ||||| ||||||||||| ||||||||||||| Sbjct: 97984 tgatgatgctgatgatgctgatgctgctgctg 97953
>emb|BX897729.6| Zebrafish DNA sequence from clone DKEY-240A12 in linkage group 4, complete sequence Length = 201932 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 219 tgatgctgctgatgatggagatgctgctgctg 250 ||||| ||||||||||| ||||||||||||| Sbjct: 115043 tgatgatgctgatgatgatgatgctgctgctg 115074
>emb|X97073.1|AOLECTIN A.oligospora gene encoding lectin Length = 1711 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 212 tttttcttgatgctgctgatgatggaga 239 |||| |||||||||||||| |||||||| Sbjct: 503 ttttgcttgatgctgctgaggatggaga 476
>gb|AE003703.3| Drosophila melanogaster chromosome 3R, section 41 of 118 of the complete sequence Length = 223948 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 228 tgatgatggagatgctgctgctgatgga 255 ||||||||| | |||||||||||||||| Sbjct: 177961 tgatgatggtggtgctgctgctgatgga 177988
>gb|AE003804.4| Drosophila melanogaster chromosome 2R, section 46 of 73 of the complete sequence Length = 260337 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 222 tgctgctgatgatggagatgctgctgct 249 |||||||||||||| || |||||||||| Sbjct: 61775 tgctgctgatgatgaagctgctgctgct 61802
>gb|AC005717.2|AC005717 Drosophila melanogaster, chromosome 2R, region 53E6-53F4, P1 clone DS00078, complete sequence Length = 51289 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgct 249 |||||||||||||| || |||||||||| Sbjct: 18095 tgctgctgatgatgaagctgctgctgct 18068
>gb|AE003559.3| Drosophila melanogaster chromosome 3L, section 26 of 83 of the complete sequence Length = 269948 Score = 40.1 bits (20), Expect = 6.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 219 tgatgctgctgatgatggagatgctgctgctgatgg 254 ||||||||||| ||||| |||| |||||||||||| Sbjct: 241038 tgatgctgctgctgatgctgatgttgctgctgatgg 241003
>gb|AE003485.3| Drosophila melanogaster chromosome X, section 37 of 74 of the complete sequence Length = 283075 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 219 tgatgctgctgatgatggagatgctgctgctg 250 ||||||| |||||| || |||||||||||||| Sbjct: 138488 tgatgcttctgatgctgcagatgctgctgctg 138519
>gb|AE003429.4| Drosophila melanogaster chromosome X, section 13 of 74 of the complete sequence Length = 326403 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 222 tgctgctgatgatggagatgctgctgctgatg 253 ||||||||||| || || |||||||||||||| Sbjct: 139458 tgctgctgatgctgcagctgctgctgctgatg 139489
>emb|AL158058.5|CNS01RGJ Human chromosome 14 DNA sequence BAC R-260G13 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 180372 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 gtaaagagaggttaaggaca 384 |||||||||||||||||||| Sbjct: 6243 gtaaagagaggttaaggaca 6262
>gb|AC104867.18| Mus musculus chromosome 18, clone RP24-320L19, complete sequence Length = 148876 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 222 tgctgctgatgatggagatgctgctgctgatg 253 |||||||||||||| ||||||| |||||||| Sbjct: 44232 tgctgctgatgatgatgatgctgatgctgatg 44201
>gb|AC124095.7| Mus musculus chromosome 1, clone RP23-245G9, complete sequence Length = 198825 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 401 aactggaagttctttcaaagcaaa 424 |||||||| ||||||||||||||| Sbjct: 55164 aactggaacttctttcaaagcaaa 55187
>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome Length = 5224283 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 aagcagatgcaaagaaactg 405 |||||||||||||||||||| Sbjct: 4053982 aagcagatgcaaagaaactg 4053963
>emb|AL772258.9| Mouse DNA sequence from clone RP23-337P24 on chromosome 2, complete sequence Length = 200480 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 tgctgctgctgatggagatg 259 |||||||||||||||||||| Sbjct: 12002 tgctgctgctgatggagatg 12021
>emb|AL133166.3|CNS01DU6 Human chromosome 14 DNA sequence BAC C-2010O1 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 105587 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 gtaaagagaggttaaggaca 384 |||||||||||||||||||| Sbjct: 89963 gtaaagagaggttaaggaca 89982
>emb|AL928923.8| Mouse DNA sequence from clone RP23-472B12 on chromosome 2, complete sequence Length = 41605 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 219 tgatgctgctgatgatggagatgctgctgctg 250 ||||| || ||||||||| ||||||||||||| Sbjct: 10237 tgatgatgatgatgatggtgatgctgctgctg 10206 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 219 tgatgctgctgatgatggagatgctgctgctg 250 ||||| || ||||||||| ||||||||||||| Sbjct: 10169 tgatgatgatgatgatggtgatgctgctgctg 10138
>gb|AC152974.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0153K02, complete sequence Length = 40117 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 305 ctggagagaggaagaaaacaaaaa 328 ||||||||| |||||||||||||| Sbjct: 33769 ctggagagaagaagaaaacaaaaa 33746
>emb|X77234.1|DMDOPREC D.melanogaster mRNA for dopamine receptor Length = 2538 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 228 tgatgatggagatgctgctgctgatgga 255 ||||||||| | |||||||||||||||| Sbjct: 522 tgatgatggtggtgctgctgctgatgga 495
>dbj|AP005117.2| Homo sapiens genomic DNA, chromosome 18p clone:RP11-21G15, complete sequences Length = 148790 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 aattttttcttgatgctgct 228 |||||||||||||||||||| Sbjct: 60091 aattttttcttgatgctgct 60110 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,494,518 Number of Sequences: 3902068 Number of extensions: 6494518 Number of successful extensions: 152426 Number of sequences better than 10.0: 244 Number of HSP's better than 10.0 without gapping: 243 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 151379 Number of HSP's gapped (non-prelim): 1024 length of query: 467 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 445 effective length of database: 17,147,199,772 effective search space: 7630503898540 effective search space used: 7630503898540 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)