ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags31i10 |
|---|---|
| Clone Library Name | barley_pub |
>ODO1_RICPR (Q9ZDY3) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 936 Score = 35.8 bits (81), Expect = 0.031 Identities = 18/40 (45%), Positives = 26/40 (65%) Frame = +3 Query: 42 DDIKYVGRAPSAATATGFYTVHVQEQTELVKKALQPDPIK 161 ++ KYVGR SA+ A G VH ++Q +L+ +AL D IK Sbjct: 893 NEFKYVGREESASPAVGSLQVHNKQQEKLLMEALGDDIIK 932
>ODO1_CAEEL (O61199) 2-oxoglutarate dehydrogenase E1 component, mitochondrial| precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) Length = 1029 Score = 34.7 bits (78), Expect = 0.069 Identities = 15/29 (51%), Positives = 20/29 (68%) Frame = +3 Query: 51 KYVGRAPSAATATGFYTVHVQEQTELVKK 137 KY GR PS++ ATG H+QEQ E++ K Sbjct: 987 KYAGRLPSSSPATGNKFTHMQEQKEMMSK 1015
>ODO1_CAEBR (Q623T0) 2-oxoglutarate dehydrogenase E1 component, mitochondrial| precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) Length = 1027 Score = 34.7 bits (78), Expect = 0.069 Identities = 15/29 (51%), Positives = 20/29 (68%) Frame = +3 Query: 51 KYVGRAPSAATATGFYTVHVQEQTELVKK 137 KY GR PS++ ATG H+QEQ E++ K Sbjct: 985 KYAGRLPSSSPATGNKYTHMQEQKEMMSK 1013
>ODO1_BUCAI (P57388) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 909 Score = 34.3 bits (77), Expect = 0.090 Identities = 12/32 (37%), Positives = 24/32 (75%) Frame = +3 Query: 48 IKYVGRAPSAATATGFYTVHVQEQTELVKKAL 143 +KY+GR+ SA+ A G+ ++H ++Q +++ AL Sbjct: 875 LKYIGRSSSASPAVGYISIHKKQQEKIIYNAL 906
>ODO1_BUCBP (Q89AJ7) Oxoglutarate dehydrogenase (EC 1.2.4.2)| Length = 916 Score = 33.9 bits (76), Expect = 0.12 Identities = 13/32 (40%), Positives = 23/32 (71%) Frame = +3 Query: 48 IKYVGRAPSAATATGFYTVHVQEQTELVKKAL 143 + YVGR+ SA+ ATG+ +H ++Q +++ AL Sbjct: 881 LNYVGRSSSASPATGYMKIHKEQQKKIIYDAL 912
>ODO1_ECOLI (P0AFG3) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 933 Score = 33.5 bits (75), Expect = 0.15 Identities = 14/32 (43%), Positives = 22/32 (68%) Frame = +3 Query: 48 IKYVGRAPSAATATGFYTVHVQEQTELVKKAL 143 ++Y GR SA+ A G+ +VH ++Q +LV AL Sbjct: 899 LRYAGRPASASPAVGYMSVHQKQQQDLVNDAL 930
>ODO1_ECOL6 (P0AFG4) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 933 Score = 33.5 bits (75), Expect = 0.15 Identities = 14/32 (43%), Positives = 22/32 (68%) Frame = +3 Query: 48 IKYVGRAPSAATATGFYTVHVQEQTELVKKAL 143 ++Y GR SA+ A G+ +VH ++Q +LV AL Sbjct: 899 LRYAGRPASASPAVGYMSVHQKQQQDLVNDAL 930
>ODO1_ECO57 (P0AFG5) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 933 Score = 33.5 bits (75), Expect = 0.15 Identities = 14/32 (43%), Positives = 22/32 (68%) Frame = +3 Query: 48 IKYVGRAPSAATATGFYTVHVQEQTELVKKAL 143 ++Y GR SA+ A G+ +VH ++Q +LV AL Sbjct: 899 LRYAGRPASASPAVGYMSVHQKQQQDLVNDAL 930
>ODO1_RICCN (Q92J42) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 928 Score = 33.1 bits (74), Expect = 0.20 Identities = 16/37 (43%), Positives = 24/37 (64%) Frame = +3 Query: 33 GSIDDIKYVGRAPSAATATGFYTVHVQEQTELVKKAL 143 G ++ KYVGR SA+ A G VH ++Q +L++ AL Sbjct: 890 GIKNEFKYVGREESASPAVGSLQVHNKQQEKLLRTAL 926
>ODO1_COXBU (P51056) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 934 Score = 32.0 bits (71), Expect = 0.45 Identities = 14/33 (42%), Positives = 24/33 (72%) Frame = +3 Query: 48 IKYVGRAPSAATATGFYTVHVQEQTELVKKALQ 146 ++YVGR+ AA A G+ ++V+ Q +LV +AL+ Sbjct: 901 LEYVGRSAFAAPAAGYSALYVKLQEQLVNQALE 933
>ODO1_AZOVI (P20707) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 943 Score = 30.8 bits (68), Expect = 0.99 Identities = 12/31 (38%), Positives = 22/31 (70%) Frame = +3 Query: 48 IKYVGRAPSAATATGFYTVHVQEQTELVKKA 140 ++Y GR SAA A G+ ++H ++Q +L++ A Sbjct: 910 LQYAGREASAAPACGYASMHAEQQEKLLQDA 940
>ODO1_GEOKA (Q5L172) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 950 Score = 30.0 bits (66), Expect = 1.7 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = +3 Query: 15 MRALGRGSIDDIKYVGRAPSAATATGFYTVHVQEQTELVKKAL 143 +RAL +D + Y+GR A+ A G VH +EQ +++ AL Sbjct: 905 LRALAPEGVD-VSYIGRRRRASPAEGDPVVHRKEQERIIRCAL 946
>ODO1_LEPIN (Q8F6S7) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 920 Score = 29.6 bits (65), Expect = 2.2 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = +3 Query: 54 YVGRAPSAATATGFYTVHVQEQTELVKKALQ 146 Y GR S + A G +H+QEQ +LV A Q Sbjct: 889 YAGRHESPSPAAGHMKLHLQEQDQLVLDAFQ 919
>ODO1_LEPIC (Q72PJ7) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 920 Score = 29.6 bits (65), Expect = 2.2 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = +3 Query: 54 YVGRAPSAATATGFYTVHVQEQTELVKKALQ 146 Y GR S + A G +H+QEQ +LV A Q Sbjct: 889 YAGRHESPSPAAGHMKLHLQEQDQLVLDAFQ 919
>ODO1_MACFA (Q60HE2) 2-oxoglutarate dehydrogenase E1 component, mitochondrial| precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) Length = 1023 Score = 29.3 bits (64), Expect = 2.9 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = +3 Query: 54 YVGRAPSAATATGFYTVHVQEQTELVKKALQPDPIKS 164 Y GR P+AA ATG H+ E L+ A D K+ Sbjct: 985 YAGRDPAAAPATGNKKTHLTELQRLLDTAFDLDVFKN 1021
>ODO1_RALEU (Q59106) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 950 Score = 28.9 bits (63), Expect = 3.8 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +3 Query: 54 YVGRAPSAATATGFYTVHVQEQTELVKKA 140 Y GR SA+ A G+Y H ++Q L++ A Sbjct: 911 YAGRPASASPAVGYYAKHNEQQKALLEAA 939
>ODO1_PONPY (Q5RCB8) 2-oxoglutarate dehydrogenase E1 component, mitochondrial| precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) Length = 1023 Score = 28.9 bits (63), Expect = 3.8 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = +3 Query: 54 YVGRAPSAATATGFYTVHVQEQTELVKKALQPDPIKS 164 Y GR P+AA ATG H+ E L+ A D K+ Sbjct: 985 YAGRDPAAAPATGNKKTHLTELQRLLDTAFDLDIFKN 1021
>TNF10_HUMAN (P50591) Tumor necrosis factor ligand superfamily member 10| (TNF-related apoptosis-inducing ligand) (TRAIL protein) (Apo-2 ligand) (Apo-2L) (CD253 antigen) Length = 281 Score = 28.9 bits (63), Expect = 3.8 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = -2 Query: 220 W*EIRSSHGYAKNLHVQNGDLM 155 W RS H + NLH++NG+L+ Sbjct: 154 WESSRSGHSFLSNLHLRNGELV 175
>ODO1_MOUSE (Q60597) 2-oxoglutarate dehydrogenase E1 component, mitochondrial| precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) Length = 1019 Score = 28.5 bits (62), Expect = 4.9 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 3/47 (6%) Frame = +3 Query: 30 RGSIDDIK---YVGRAPSAATATGFYTVHVQEQTELVKKALQPDPIK 161 R +ID K Y GR P+AA ATG H+ E + A D K Sbjct: 970 RTTIDRAKPVWYAGRDPAAAPATGNKKTHLTELQRFLDTAFDLDAFK 1016
>IAP3_NPVOP (P41437) Apoptosis inhibitor 3 (IAP-3)| Length = 268 Score = 28.5 bits (62), Expect = 4.9 Identities = 14/27 (51%), Positives = 15/27 (55%) Frame = -3 Query: 81 WLQMGPFRRT*YHLCCHDRAPSSRSAA 1 W PF R H HDRAP +RSAA Sbjct: 77 WAPQCPFVRNNAHDTPHDRAPPARSAA 103
>GLGA_BACST (O08328) Glycogen synthase (EC 2.4.1.21) (Starch [bacterial| glycogen] synthase) Length = 485 Score = 28.1 bits (61), Expect = 6.4 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +3 Query: 39 IDDIKYVGRAPSAATATGFYTVHVQEQTELVKKALQ 146 IDD Y A TAT Y+VH +E+ +L K+ALQ Sbjct: 249 IDDEFYNPEADPFLTAT--YSVHTRERKQLNKRALQ 282
>ODO1_BACLD (Q65IH4) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 944 Score = 28.1 bits (61), Expect = 6.4 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = +3 Query: 48 IKYVGRAPSAATATGFYTVHVQEQTELVKKAL 143 ++Y+GR ++ A G TVH +EQ +V +L Sbjct: 909 VRYIGRRRRSSPAEGDPTVHKKEQERIVSDSL 940
>ODO1_BACSU (P23129) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 941 Score = 27.7 bits (60), Expect = 8.4 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = +3 Query: 48 IKYVGRAPSAATATGFYTVHVQEQTELVKKAL 143 ++Y+GR ++ A G TVH +EQ +V +L Sbjct: 906 VQYIGRRRRSSPAEGDPTVHKKEQERIVSDSL 937 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,265,236 Number of Sequences: 219361 Number of extensions: 436666 Number of successful extensions: 1134 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 1124 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1134 length of database: 80,573,946 effective HSP length: 49 effective length of database: 69,825,257 effective search space used: 1675806168 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
