ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags31i07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY052154.1| Triticum aestivum porphobilinogen deaminase mRNA,... 482 e-133
2ref|XM_464263.2| Oryza sativa (japonica cultivar-group), mRNA 280 2e-72
3ref|XM_464262.1| Oryza sativa (japonica cultivar-group), mRNA 280 2e-72
4dbj|AK102265.1| Oryza sativa (japonica cultivar-group) cDNA clon... 280 2e-72
5dbj|AK060914.1| Oryza sativa (japonica cultivar-group) cDNA clon... 280 2e-72
6gb|AY107718.1| Zea mays PCO070684 mRNA sequence 272 6e-70
7emb|Y12809.1|ZMY12809 Zea mays mRNA for putative porphobilinogen... 240 2e-60
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 230 2e-57
9dbj|AP005071.3| Oryza sativa (japonica cultivar-group) genomic D... 230 2e-57
10gb|AY105442.1| Zea mays PCO070685 mRNA sequence 220 2e-54
11emb|AL109964.20|HS1118M15 Human DNA sequence from clone RP5-1118... 42 0.99
12gb|L43967.2| Mycoplasma genitalium G37, complete genome 42 0.99
13emb|CR626884.13| Zebrafish DNA sequence from clone DKEY-83H2 in ... 40 3.9
14gb|AC101996.9| Mus musculus chromosome 15, clone RP24-441N7, com... 40 3.9
15gb|AC146562.17| Medicago truncatula clone mth2-14d10, complete s... 40 3.9
16gb|AC147430.9| Medicago truncatula clone mth2-71e6, complete seq... 40 3.9
17emb|AL139347.10| Human DNA sequence from clone RP5-871P9 on chro... 40 3.9
18emb|AL645685.12| Mouse DNA sequence from clone RP23-198I4 on chr... 40 3.9
19dbj|AK052121.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN ... 40 3.9
20dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 3.9
21gb|AC114424.10| Mus musculus chromosome 3, clone RP24-84L9, comp... 40 3.9

>gb|AY052154.1| Triticum aestivum porphobilinogen deaminase mRNA, partial cds
          Length = 1220

 Score =  482 bits (243), Expect = e-133
 Identities = 284/295 (96%), Gaps = 2/295 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcagttgctcaaggcgctattggaatagcttgcaggcagcaatgatgataaaatgatgga 60
           ||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 579 gcagtcgctcaaggcgctattggaataacttgcagg-agcaatgatgataaaatgatgga 637

                                                                       
Query: 61  gtatctatcctctttgaatcatgaagataccagtattagctgttgcatgtgaaagagaat 120
           |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 638 gtatctgtcctctttgaatcatgaagataccag-attagctgttgcatgtgaaagagaat 696

                                                                       
Query: 121 tcttgtctgttcttgatggtaactgtcgaactccaattgcggcatatgcttatcgtgaca 180
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 697 tcttgtctgttcttgatggtaactgccgaactccaattgcggcatatgcttatcgtgaca 756

                                                                       
Query: 181 aggatgggaactgttcattccgggggctattggcttcaccagatggctctatagtatacg 240
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 aggatgggaactgctcattccgggggctattggcttcaccagatggctctatagtatacg 816

                                                                  
Query: 241 agacatcaagaagtggaacatattcttttgatgacatggtcgcgataggccaaga 295
           |||| ||||| ||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 817 agacgtcaaggagtggaacatattcttttgatgacatggtcgcgttaggtcaaga 871



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>ref|XM_464263.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1466

 Score =  280 bits (141), Expect = 2e-72
 Identities = 230/257 (89%), Gaps = 2/257 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gcagttgctcaaggcgctattggaatagcttgcaggcagcaatgatgataaaatgatgga 60
            |||||||||||||| ||||||||||||||||||||  |||| |||||| | ||||||| |
Sbjct: 808  gcagttgctcaaggtgctattggaatagcttgcaga-agcagtgatgacacaatgatgaa 866

                                                                        
Query: 61   gtatctatcctctttgaatcatgaagataccagtattagctgttgcatgtgaaagagaat 120
             ||  | ||||| ||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 867  ttacttgtcctcattgaaccatgaagataccag-attagctgttgcatgtgaaagagaat 925

                                                                        
Query: 121  tcttgtctgttcttgatggtaactgtcgaactccaattgcggcatatgcttatcgtgaca 180
            ||||||| ||||||||||| ||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 926  tcttgtcagttcttgatggcaactgccgaactccaattgcggcatatgcttctcgtgaca 985

                                                                        
Query: 181  aggatgggaactgttcattccgggggctattggcttcaccagatggctctatagtatacg 240
            |||||||||| ||||||||||| ||||||||||||||||| ||||| |||| |||||| |
Sbjct: 986  aggatgggaattgttcattccgagggctattggcttcacctgatggatctacagtatatg 1045

                             
Query: 241  agacatcaagaagtgga 257
            |||| || |||| ||||
Sbjct: 1046 agacttcgagaactgga 1062



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>ref|XM_464262.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1416

 Score =  280 bits (141), Expect = 2e-72
 Identities = 230/257 (89%), Gaps = 2/257 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gcagttgctcaaggcgctattggaatagcttgcaggcagcaatgatgataaaatgatgga 60
            |||||||||||||| ||||||||||||||||||||  |||| |||||| | ||||||| |
Sbjct: 775  gcagttgctcaaggtgctattggaatagcttgcaga-agcagtgatgacacaatgatgaa 833

                                                                        
Query: 61   gtatctatcctctttgaatcatgaagataccagtattagctgttgcatgtgaaagagaat 120
             ||  | ||||| ||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 834  ttacttgtcctcattgaaccatgaagataccag-attagctgttgcatgtgaaagagaat 892

                                                                        
Query: 121  tcttgtctgttcttgatggtaactgtcgaactccaattgcggcatatgcttatcgtgaca 180
            ||||||| ||||||||||| ||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 893  tcttgtcagttcttgatggcaactgccgaactccaattgcggcatatgcttctcgtgaca 952

                                                                        
Query: 181  aggatgggaactgttcattccgggggctattggcttcaccagatggctctatagtatacg 240
            |||||||||| ||||||||||| ||||||||||||||||| ||||| |||| |||||| |
Sbjct: 953  aggatgggaattgttcattccgagggctattggcttcacctgatggatctacagtatatg 1012

                             
Query: 241  agacatcaagaagtgga 257
            |||| || |||| ||||
Sbjct: 1013 agacttcgagaactgga 1029



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>dbj|AK102265.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033088M20, full
            insert sequence
          Length = 1466

 Score =  280 bits (141), Expect = 2e-72
 Identities = 230/257 (89%), Gaps = 2/257 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gcagttgctcaaggcgctattggaatagcttgcaggcagcaatgatgataaaatgatgga 60
            |||||||||||||| ||||||||||||||||||||  |||| |||||| | ||||||| |
Sbjct: 808  gcagttgctcaaggtgctattggaatagcttgcaga-agcagtgatgacacaatgatgaa 866

                                                                        
Query: 61   gtatctatcctctttgaatcatgaagataccagtattagctgttgcatgtgaaagagaat 120
             ||  | ||||| ||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 867  ttacttgtcctcattgaaccatgaagataccag-attagctgttgcatgtgaaagagaat 925

                                                                        
Query: 121  tcttgtctgttcttgatggtaactgtcgaactccaattgcggcatatgcttatcgtgaca 180
            ||||||| ||||||||||| ||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 926  tcttgtcagttcttgatggcaactgccgaactccaattgcggcatatgcttctcgtgaca 985

                                                                        
Query: 181  aggatgggaactgttcattccgggggctattggcttcaccagatggctctatagtatacg 240
            |||||||||| ||||||||||| ||||||||||||||||| ||||| |||| |||||| |
Sbjct: 986  aggatgggaattgttcattccgagggctattggcttcacctgatggatctacagtatatg 1045

                             
Query: 241  agacatcaagaagtgga 257
            |||| || |||| ||||
Sbjct: 1046 agacttcgagaactgga 1062



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>dbj|AK060914.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-G03, full
            insert sequence
          Length = 1416

 Score =  280 bits (141), Expect = 2e-72
 Identities = 230/257 (89%), Gaps = 2/257 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gcagttgctcaaggcgctattggaatagcttgcaggcagcaatgatgataaaatgatgga 60
            |||||||||||||| ||||||||||||||||||||  |||| |||||| | ||||||| |
Sbjct: 775  gcagttgctcaaggtgctattggaatagcttgcaga-agcagtgatgacacaatgatgaa 833

                                                                        
Query: 61   gtatctatcctctttgaatcatgaagataccagtattagctgttgcatgtgaaagagaat 120
             ||  | ||||| ||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 834  ttacttgtcctcattgaaccatgaagataccag-attagctgttgcatgtgaaagagaat 892

                                                                        
Query: 121  tcttgtctgttcttgatggtaactgtcgaactccaattgcggcatatgcttatcgtgaca 180
            ||||||| ||||||||||| ||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 893  tcttgtcagttcttgatggcaactgccgaactccaattgcggcatatgcttctcgtgaca 952

                                                                        
Query: 181  aggatgggaactgttcattccgggggctattggcttcaccagatggctctatagtatacg 240
            |||||||||| ||||||||||| ||||||||||||||||| ||||| |||| |||||| |
Sbjct: 953  aggatgggaattgttcattccgagggctattggcttcacctgatggatctacagtatatg 1012

                             
Query: 241  agacatcaagaagtgga 257
            |||| || |||| ||||
Sbjct: 1013 agacttcgagaactgga 1029



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>gb|AY107718.1| Zea mays PCO070684 mRNA sequence
          Length = 1003

 Score =  272 bits (137), Expect = 6e-70
 Identities = 259/297 (87%), Gaps = 2/297 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcagttgctcaaggcgctattggaatagcttgcaggcagcaatgatgataaaatgatgga 60
           |||||||| ||||| |||||||||||||||||| |  ||||||||||| |||||||||||
Sbjct: 380 gcagttgcccaaggtgctattggaatagcttgccga-agcaatgatgacaaaatgatgga 438

                                                                       
Query: 61  gtatctatcctctttgaatcatgaagataccagtattagctgttgcatgtgaaagagaat 120
           |||||||||  | ||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 439 gtatctatcagcgttgaaccatgaagataccag-attagctgttgcatgtgaaagagaat 497

                                                                       
Query: 121 tcttgtctgttcttgatggtaactgtcgaactccaattgcggcatatgcttatcgtgaca 180
           | ||| | ||||||||||||||||| |||||||||||||| || |||||||| |||||||
Sbjct: 498 ttttggcagttcttgatggtaactgccgaactccaattgcagcctatgcttaccgtgaca 557

                                                                       
Query: 181 aggatgggaactgttcattccgggggctattggcttcaccagatggctctatagtatacg 240
           | |||||||| || |||||||| || |||||| |||| |||||||| |||| |||||  |
Sbjct: 558 atgatgggaattgctcattccgcggtctattgtcttccccagatggatctaaagtatttg 617

                                                                    
Query: 241 agacatcaagaagtggaacatattcttttgatgacatggtcgcgataggccaagatg 297
           ||||| ||||||||||| | || |||||||| |||||||| | ||| ||| ||||||
Sbjct: 618 agacaacaagaagtggaccgtactcttttgacgacatggttgagatgggcaaagatg 674



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>emb|Y12809.1|ZMY12809 Zea mays mRNA for putative porphobilinogen deaminase
          Length = 865

 Score =  240 bits (121), Expect = 2e-60
 Identities = 256/297 (86%), Gaps = 3/297 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   gcagttgctcaaggcgctattggaatagcttgcaggcagcaatgatgataaaatgatgga 60
           |||||||| ||||| |||||||||||| ||||| |  ||||||||||| |||||||||||
Sbjct: 574 gcagttgcccaaggtgctattggaataccttgccga-agcaatgatgacaaaatgatgga 516

                                                                       
Query: 61  gtatctatcctctttgaatcatgaagataccagtattagctgttgcatgtgaaagagaat 120
           |||||||||  | ||||| |||||||||||||  ||||||||||||||||||||||||||
Sbjct: 515 gtatctatcagcgttgaaccatgaagataccac-attagctgttgcatgtgaaagagaat 457

                                                                       
Query: 121 tcttgtctgttcttgatggtaactgtcgaactccaattgcggcatatgcttatcgtgaca 180
           | ||| | ||||||||||||||||| |||||||||||||| || |||||||| |||||||
Sbjct: 456 t-ttggcagttcttgatggtaactgccgaactccaattgcagcctatgcttaccgtgaca 398

                                                                       
Query: 181 aggatgggaactgttcattccgggggctattggcttcaccagatggctctatagtatacg 240
           | |||||||| || |||||||| || |||||| |||| |||||||| |||| |||||  |
Sbjct: 397 atgatgggaattgctcattccgcggtctattgtcttccccagatggatctaaagtatttg 338

                                                                    
Query: 241 agacatcaagaagtggaacatattcttttgatgacatggtcgcgataggccaagatg 297
           ||||| | ||||||||| | || |||||||| |||||||| | ||| ||| ||||||
Sbjct: 337 agacaacgagaagtggaccgtactcttttgacgacatggttgagatgggcaaagatg 281



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  230 bits (116), Expect = 2e-57
 Identities = 153/164 (93%), Gaps = 1/164 (0%)
 Strand = Plus / Plus

                                                                           
Query: 68      tcctctttgaatcatgaagataccagtattagctgttgcatgtgaaagagaattcttgtc 127
               ||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 3717564 tcctcattgaaccatgaagataccag-attagctgttgcatgtgaaagagaattcttgtc 3717622

                                                                           
Query: 128     tgttcttgatggtaactgtcgaactccaattgcggcatatgcttatcgtgacaaggatgg 187
                ||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 3717623 agttcttgatggcaactgccgaactccaattgcggcatatgcttctcgtgacaaggatgg 3717682

                                                           
Query: 188     gaactgttcattccgggggctattggcttcaccagatggctcta 231
               ||| ||||||||||| ||||||||||||||||| ||||| ||||
Sbjct: 3717683 gaattgttcattccgagggctattggcttcacctgatggatcta 3717726



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                                  
Query: 1       gcagttgctcaaggcgctattggaatagcttgcag 35
               |||||||||||||| ||||||||||||||||||||
Sbjct: 3717032 gcagttgctcaaggtgctattggaatagcttgcag 3717066



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>dbj|AP005071.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0669G09
          Length = 140067

 Score =  230 bits (116), Expect = 2e-57
 Identities = 153/164 (93%), Gaps = 1/164 (0%)
 Strand = Plus / Plus

                                                                         
Query: 68    tcctctttgaatcatgaagataccagtattagctgttgcatgtgaaagagaattcttgtc 127
             ||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 57881 tcctcattgaaccatgaagataccag-attagctgttgcatgtgaaagagaattcttgtc 57939

                                                                         
Query: 128   tgttcttgatggtaactgtcgaactccaattgcggcatatgcttatcgtgacaaggatgg 187
              ||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 57940 agttcttgatggcaactgccgaactccaattgcggcatatgcttctcgtgacaaggatgg 57999

                                                         
Query: 188   gaactgttcattccgggggctattggcttcaccagatggctcta 231
             ||| ||||||||||| ||||||||||||||||| ||||| ||||
Sbjct: 58000 gaattgttcattccgagggctattggcttcacctgatggatcta 58043



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                                
Query: 1     gcagttgctcaaggcgctattggaatagcttgcag 35
             |||||||||||||| ||||||||||||||||||||
Sbjct: 57349 gcagttgctcaaggtgctattggaatagcttgcag 57383



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>gb|AY105442.1| Zea mays PCO070685 mRNA sequence
          Length = 1591

 Score =  220 bits (111), Expect = 2e-54
 Identities = 251/295 (85%), Gaps = 2/295 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gcagttgctcaaggcgctattggaatagcttgcaggcagcaatgatgataaaatgatgga 60
            |||||||| ||||| ||||||||||| |||||| |  ||||| ||||| |||||||||||
Sbjct: 835  gcagttgcccaaggtgctattggaatcgcttgccga-agcaacgatgacaaaatgatgga 893

                                                                        
Query: 61   gtatctatcctctttgaatcatgaagataccagtattagctgttgcatgtgaaagagaat 120
            |||||| ||||| ||||| || || |||||||| | |||||||  |||| ||||||||||
Sbjct: 894  gtatctgtcctcgttgaaccacgaggataccag-actagctgtcacatgcgaaagagaat 952

                                                                        
Query: 121  tcttgtctgttcttgatggtaactgtcgaactccaattgcggcatatgcttatcgtgaca 180
            ||||| | ||||||||||| ||||| ||||||||||||||||| |||||||| |||||||
Sbjct: 953  tcttggcagttcttgatggcaactgccgaactccaattgcggcctatgcttaccgtgaca 1012

                                                                        
Query: 181  aggatgggaactgttcattccgggggctattggcttcaccagatggctctatagtatacg 240
            |||| |||||||| ||||||||||| ||| || |||||||||| || |||| |||||  |
Sbjct: 1013 aggacgggaactgctcattccggggcctactgtcttcaccagacggatctaaagtatttg 1072

                                                                   
Query: 241  agacatcaagaagtggaacatattcttttgatgacatggtcgcgataggccaaga 295
            ||||  ||||||||||| | || ||||| || |||||||||| ||| ||| ||||
Sbjct: 1073 agacggcaagaagtggaccgtactctttcgacgacatggtcgagatgggcaaaga 1127



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>emb|AL109964.20|HS1118M15 Human DNA sequence from clone RP5-1118M15 on chromosome 20 Contains the
             3' end of the CTNNBL1 gene for catenin beta like 1, the
             C20orf102 gene for a novel Immunoglobulin
             domain-containing protein and a CpG Island, complete
             sequence
          Length = 95851

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                          
Query: 173   tcgtgacaaggatgggaactgttcattcc 201
             |||||||||||||||| ||||||||||||
Sbjct: 25513 tcgtgacaaggatggg-actgttcattcc 25486



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>gb|L43967.2| Mycoplasma genitalium G37, complete genome
          Length = 580076

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 81     atgaagataccagtattagct 101
              |||||||||||||||||||||
Sbjct: 156108 atgaagataccagtattagct 156128



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>emb|CR626884.13| Zebrafish DNA sequence from clone DKEY-83H2 in linkage group 15,
             complete sequence
          Length = 207732

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   ttcttgtctgttcttgatgg 139
             ||||||||||||||||||||
Sbjct: 81824 ttcttgtctgttcttgatgg 81805



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>gb|AC101996.9| Mus musculus chromosome 15, clone RP24-441N7, complete sequence
          Length = 164681

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     tgaagataccagtattagct 101
              ||||||||||||||||||||
Sbjct: 131198 tgaagataccagtattagct 131179



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>gb|AC146562.17| Medicago truncatula clone mth2-14d10, complete sequence
          Length = 118505

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 45/52 (86%), Gaps = 1/52 (1%)
 Strand = Plus / Plus

                                                                 
Query: 4     gttgctcaaggcgctattggaatagcttgcaggcagcaatgatgataaaatg 55
             ||||| ||||| || ||||||||||| || ||  ||||||||||||||||||
Sbjct: 77652 gttgcgcaaggtgcaattggaatagcctgtaga-agcaatgatgataaaatg 77702



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>gb|AC147430.9| Medicago truncatula clone mth2-71e6, complete sequence
          Length = 125478

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 37   cagcaatgatgataaaatgatgga 60
            ||||||||||| ||||||||||||
Sbjct: 7027 cagcaatgatggtaaaatgatgga 7050



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>emb|AL139347.10| Human DNA sequence from clone RP5-871P9 on chromosome 1p21.2-22.1
             Contains a NADH dehydrogenase (ubiquinone) Fe-S protein 5
             (15kDa (NADH-coenzyme Q reductase) (NDUFS5)) pseudogene,
             complete sequence
          Length = 74010

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 216   tcaccagatggctctatagtatac 239
             |||||||||||||||| |||||||
Sbjct: 16576 tcaccagatggctctagagtatac 16553



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>emb|AL645685.12| Mouse DNA sequence from clone RP23-198I4 on chromosome 1 Contains a
              ribosomal protein S13 (Rps13) pseudogene, a ribosomal
              protein S27 (Rps27) pseudogene a novel genes and the 3' end
              of a novel gene, complete sequence
          Length = 218950

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 215    ttcaccagatggctctatagtata 238
              |||||||| |||||||||||||||
Sbjct: 150470 ttcaccagttggctctatagtata 150493



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>dbj|AK052121.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length
          enriched library, clone:D230048G05
          product:unclassifiable, full insert sequence
          Length = 2835

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 42 atgatgataaaatgatggag 61
          ||||||||||||||||||||
Sbjct: 62 atgatgataaaatgatggag 81



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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 1       gcagttgctcaaggcgctattgga 24
               |||| |||||||||||||||||||
Sbjct: 1950526 gcagatgctcaaggcgctattgga 1950549



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>gb|AC114424.10| Mus musculus chromosome 3, clone RP24-84L9, complete sequence
          Length = 220500

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 42     atgatgataaaatgatggag 61
              ||||||||||||||||||||
Sbjct: 157714 atgatgataaaatgatggag 157695


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,437,975
Number of Sequences: 3902068
Number of extensions: 2437975
Number of successful extensions: 44778
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 44700
Number of HSP's gapped (non-prelim): 60
length of query: 297
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 275
effective length of database: 17,147,199,772
effective search space: 4715479937300
effective search space used: 4715479937300
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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