ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bags31i04 |
|---|---|
| Clone Library Name | barley_pub |
>RL5A_ORYSA (P49625) 60S ribosomal protein L5-1| Length = 304 Score = 178 bits (451), Expect(2) = 4e-60 Identities = 87/96 (90%), Positives = 93/96 (96%) Frame = +1 Query: 172 RDVTAQIVYATIAGDIVMAAAYSHELPRYGLDVGLTNYAAAYCTGLLLARRVLKSRDLDE 351 +D+TAQIVYATIAGDIVMAAAYSHELPRYGL+VGLTNYAAAYCTGLLLARRVLK R LD+ Sbjct: 59 KDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQ 118 Query: 352 EYEGNVEATGEDFSVEPADERRPFRALLDVGLIRTT 459 EYEGN+EATGED+ VEPADERRPFRALLDVGLIRTT Sbjct: 119 EYEGNIEATGEDYYVEPADERRPFRALLDVGLIRTT 154 Score = 72.4 bits (176), Expect(2) = 4e-60 Identities = 35/54 (64%), Positives = 37/54 (68%) Frame = +3 Query: 12 RTXKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNK 173 +T KT AY TDYRAR+RLTNQDKNKYNTPKYRFVVRFTNK Sbjct: 6 KTQKTNAYHKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNK 59
>RL5B_ORYSA (Q8L4L4) 60S ribosomal protein L5-2| Length = 304 Score = 176 bits (446), Expect(2) = 5e-56 Identities = 87/96 (90%), Positives = 92/96 (95%) Frame = +1 Query: 172 RDVTAQIVYATIAGDIVMAAAYSHELPRYGLDVGLTNYAAAYCTGLLLARRVLKSRDLDE 351 +D+TAQIVYATIAGDIVMAAAYSHELPRYGL+VGLTNYAAAYCTGLLLARRVL R LD+ Sbjct: 59 KDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLTLRGLDQ 118 Query: 352 EYEGNVEATGEDFSVEPADERRPFRALLDVGLIRTT 459 EYEGNVEATGED+ VEPADERRPFRALLDVGLIRTT Sbjct: 119 EYEGNVEATGEDYYVEPADERRPFRALLDVGLIRTT 154 Score = 60.8 bits (146), Expect(2) = 5e-56 Identities = 32/54 (59%), Positives = 34/54 (62%) Frame = +3 Query: 12 RTXKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNK 173 +T KT AY TDYRAR+RLTNQDKNKYNTPKYRFV TNK Sbjct: 9 KTQKTHAYFKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFV---TNK 59
>RL5_CUCSA (Q6UNT2) 60S ribosomal protein L5| Length = 302 Score = 165 bits (418), Expect(2) = 7e-54 Identities = 79/96 (82%), Positives = 91/96 (94%) Frame = +1 Query: 172 RDVTAQIVYATIAGDIVMAAAYSHELPRYGLDVGLTNYAAAYCTGLLLARRVLKSRDLDE 351 +D+TAQI+ A+IAGD+V+A+AYSHELP+YGL+VGLTNYAAAYCTGLLLARRVLK ++D Sbjct: 58 KDITAQIISASIAGDLVLASAYSHELPQYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDA 117 Query: 352 EYEGNVEATGEDFSVEPADERRPFRALLDVGLIRTT 459 EYEGNVEATGED+SVEPAD RRPFRALLDVGLIRTT Sbjct: 118 EYEGNVEATGEDYSVEPADTRRPFRALLDVGLIRTT 153 Score = 64.3 bits (155), Expect(2) = 7e-54 Identities = 31/55 (56%), Positives = 36/55 (65%) Frame = +3 Query: 9 SRTXKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNK 173 ++ KT+AY TDYRAR+RL NQDKNKYNTPKYRFVVR +NK Sbjct: 4 AKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNK 58
>RL5_ARATH (P49227) 60S ribosomal protein L5| Length = 301 Score = 162 bits (410), Expect(2) = 9e-54 Identities = 79/96 (82%), Positives = 88/96 (91%) Frame = +1 Query: 172 RDVTAQIVYATIAGDIVMAAAYSHELPRYGLDVGLTNYAAAYCTGLLLARRVLKSRDLDE 351 +D+ AQIV A+IAGDIV A+AY+HELP+YGL VGLTNYAAAYCTGLLLARRVLK ++D+ Sbjct: 58 KDIVAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDD 117 Query: 352 EYEGNVEATGEDFSVEPADERRPFRALLDVGLIRTT 459 EYEGNVEATGEDFSVEP D RRPFRALLDVGLIRTT Sbjct: 118 EYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTT 153 Score = 67.0 bits (162), Expect(2) = 9e-54 Identities = 32/54 (59%), Positives = 36/54 (66%) Frame = +3 Query: 12 RTXKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNK 173 ++ K+ AY TDYRAR+RL NQDKNKYNTPKYRFVVRFTNK Sbjct: 5 KSSKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNK 58
>RL5_CAEEL (P49405) 60S ribosomal protein L5| Length = 293 Score = 132 bits (331), Expect(2) = 2e-41 Identities = 63/99 (63%), Positives = 79/99 (79%) Frame = +1 Query: 163 LPTRDVTAQIVYATIAGDIVMAAAYSHELPRYGLDVGLTNYAAAYCTGLLLARRVLKSRD 342 + +DV AQ+ Y+ I GD+V+A+AYSHELPRYGL VGLTNYAAAY TGLLLARR LK+ Sbjct: 55 ITNKDVVAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIG 114 Query: 343 LDEEYEGNVEATGEDFSVEPADERRPFRALLDVGLIRTT 459 LD Y+G+ E TGED++VE +R PF+A+LD+GL RTT Sbjct: 115 LDSTYKGHEELTGEDYNVEEEGDRAPFKAVLDIGLARTT 153 Score = 56.2 bits (134), Expect(2) = 2e-41 Identities = 28/54 (51%), Positives = 31/54 (57%) Frame = +3 Query: 12 RTXKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNK 173 + K +AY TDY AR RLT QDKNKYNTPKYR +VR TNK Sbjct: 5 KVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNK 58
>RL5_STYCL (Q26481) 60S ribosomal protein L5| Length = 294 Score = 122 bits (305), Expect(2) = 6e-39 Identities = 61/97 (62%), Positives = 72/97 (74%), Gaps = 1/97 (1%) Frame = +1 Query: 172 RDVTAQIVYATIAGDIVMAAAYSHELPRYGLDVGLTNYAAAYCTGLLLARRVLKSRDLDE 351 +D+ QI YA I GD+V+ AAY+HELPRYG+ VGLTNYAAAYCTGLLL+RR+L LDE Sbjct: 57 KDIVCQIAYARIEGDVVICAAYAHELPRYGVKVGLTNYAAAYCTGLLLSRRLLNKFGLDE 116 Query: 352 EYEGNVEATGEDFSVEPADER-RPFRALLDVGLIRTT 459 YEG E G++F VE D + FRA LDVGL RTT Sbjct: 117 IYEGQTEIDGDEFYVEDVDGKPGAFRAFLDVGLARTT 153 Score = 57.8 bits (138), Expect(2) = 6e-39 Identities = 29/58 (50%), Positives = 32/58 (55%) Frame = +3 Query: 12 RTXKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKGCHC 185 + K +AY TDY AR RL QDKNKYNTPKYR +VRFTNK C Sbjct: 4 KVVKNKAYFKRYQVKYKRRRQGKTDYFARKRLVVQDKNKYNTPKYRMIVRFTNKDIVC 61
>RL5_DUNSA (O22608) 60S ribosomal protein L5| Length = 271 Score = 120 bits (300), Expect(2) = 6e-39 Identities = 60/97 (61%), Positives = 74/97 (76%), Gaps = 1/97 (1%) Frame = +1 Query: 172 RDVTAQIVYATIAGDIVMAAAYSHELPRYGLDVGLTNYAAAYCTGLLLARRVLKSRDLDE 351 ++VT QIVY+TI GD+VMAAAYS ELP YGL VGLTNY+AAYC GLL+ARR+L +L + Sbjct: 58 KNVTCQIVYSTIQGDVVMAAAYSKELPNYGLKVGLTNYSAAYCVGLLVARRILTKLNLAD 117 Query: 352 EYEGNVEATGEDFSVEPA-DERRPFRALLDVGLIRTT 459 Y+G E GED++VEP D +PF LLD GL RT+ Sbjct: 118 TYKGQEEPDGEDYNVEPVEDGPKPFYCLLDTGLKRTS 154 Score = 59.7 bits (143), Expect(2) = 6e-39 Identities = 30/58 (51%), Positives = 32/58 (55%) Frame = +3 Query: 12 RTXKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKGCHC 185 + KT Y TDYRARLRL QDKNKYNT KYR VVRF+NK C Sbjct: 5 KVVKTSPYFSRYQVKYRRRRQGKTDYRARLRLVRQDKNKYNTHKYRLVVRFSNKNVTC 62
>RL5_HELAN (O65353) 60S ribosomal protein L5| Length = 297 Score = 119 bits (299), Expect(2) = 3e-37 Identities = 58/97 (59%), Positives = 74/97 (76%), Gaps = 1/97 (1%) Frame = +1 Query: 172 RDVTAQIVYATIAGDIVMAAAYSHELPRYGLDVGLTNYAAAYCTGLLLARRVLKSRDLDE 351 RD+T Q+ Y+ I GD ++ AAY+HELP+YG+ VGLTNYAAAYCTGLLLAR++L LD+ Sbjct: 58 RDITCQVAYSRIEGDKILCAAYAHELPQYGVKVGLTNYAAAYCTGLLLARKLLSQLGLDK 117 Query: 352 EYEGNVEATGEDFSVEPA-DERRPFRALLDVGLIRTT 459 Y G+ E TGE+F+V+P D FR LDVGL+RTT Sbjct: 118 LYIGSTEVTGEEFNVKPVEDGPGAFRCYLDVGLMRTT 154 Score = 54.7 bits (130), Expect(2) = 3e-37 Identities = 25/35 (71%), Positives = 27/35 (77%) Frame = +3 Query: 81 TDYRARLRLTNQDKNKYNTPKYRFVVRFTNKGCHC 185 TDY AR RL QDKNKYNTPKYR VVRF+N+ C Sbjct: 28 TDYFARKRLIAQDKNKYNTPKYRLVVRFSNRDITC 62
>RL5B_XENLA (P15126) 60S ribosomal protein L5-B| Length = 295 Score = 120 bits (300), Expect(2) = 3e-37 Identities = 59/97 (60%), Positives = 72/97 (74%), Gaps = 1/97 (1%) Frame = +1 Query: 172 RDVTAQIVYATIAGDIVMAAAYSHELPRYGLDVGLTNYAAAYCTGLLLARRVLKSRDLDE 351 RD+ QI YA I GD+++ AAY+HELP+YG+ VGLTNYAAAYCTGLLLARR+L LD+ Sbjct: 57 RDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNKFGLDK 116 Query: 352 EYEGNVEATGEDFSVEPAD-ERRPFRALLDVGLIRTT 459 YEG VE TG++++VE D E F LD GL RTT Sbjct: 117 VYEGQVEVTGDEYNVESVDGEPGAFTCYLDAGLTRTT 153 Score = 54.3 bits (129), Expect(2) = 3e-37 Identities = 27/58 (46%), Positives = 31/58 (53%) Frame = +3 Query: 12 RTXKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKGCHC 185 + K +AY TDY AR RL QDKNKYNTPKYR +VR TN+ C Sbjct: 4 KVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIIC 61
>RL5A_XENLA (P15125) 60S ribosomal protein L5-A| Length = 295 Score = 120 bits (300), Expect(2) = 3e-37 Identities = 59/97 (60%), Positives = 72/97 (74%), Gaps = 1/97 (1%) Frame = +1 Query: 172 RDVTAQIVYATIAGDIVMAAAYSHELPRYGLDVGLTNYAAAYCTGLLLARRVLKSRDLDE 351 RD+ QI YA I GD+++ AAY+HELP+YG+ VGLTNYAAAYCTGLLLARR+L LD+ Sbjct: 57 RDIICQIAYARIEGDMIVCAAYAHELPKYGIKVGLTNYAAAYCTGLLLARRLLNKFGLDK 116 Query: 352 EYEGNVEATGEDFSVEPAD-ERRPFRALLDVGLIRTT 459 YEG VE TG++++VE D E F LD GL RTT Sbjct: 117 VYEGQVEVTGDEYNVESIDGEPGAFTCYLDAGLTRTT 153 Score = 54.3 bits (129), Expect(2) = 3e-37 Identities = 27/58 (46%), Positives = 31/58 (53%) Frame = +3 Query: 12 RTXKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKGCHC 185 + K +AY TDY AR RL QDKNKYNTPKYR +VR TN+ C Sbjct: 4 KVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIIC 61
>RL5_ANOGA (O44248) 60S ribosomal protein L5| Length = 327 Score = 122 bits (306), Expect(2) = 7e-37 Identities = 62/100 (62%), Positives = 72/100 (72%), Gaps = 1/100 (1%) Frame = +1 Query: 163 LPTRDVTAQIVYATIAGDIVMAAAYSHELPRYGLDVGLTNYAAAYCTGLLLARRVLKSRD 342 L RD+T QI Y I GD ++ AAYSHELPRYG+ VGLTNYAAAYCTGLL+ARR+L+ Sbjct: 55 LSNRDITCQIAYRRIEGDRIVCAAYSHELPRYGVKVGLTNYAAAYCTGLLVARRILQKLR 114 Query: 343 LDEEYEGNVEATGEDFSVEPADE-RRPFRALLDVGLIRTT 459 LD Y G + TGE++ VEP DE FR LDVGL RTT Sbjct: 115 LDTLYAGCTDVTGEEYLVEPVDEGPAAFRCYLDVGLARTT 154 Score = 50.4 bits (119), Expect(2) = 7e-37 Identities = 22/35 (62%), Positives = 26/35 (74%) Frame = +3 Query: 81 TDYRARLRLTNQDKNKYNTPKYRFVVRFTNKGCHC 185 TDY AR RL QDKNKYNTPK+R +VR +N+ C Sbjct: 28 TDYYARKRLIFQDKNKYNTPKFRLIVRLSNRDITC 62
>RL5_CHICK (P22451) 60S ribosomal protein L5| Length = 296 Score = 118 bits (296), Expect(2) = 7e-37 Identities = 58/97 (59%), Positives = 72/97 (74%), Gaps = 1/97 (1%) Frame = +1 Query: 172 RDVTAQIVYATIAGDIVMAAAYSHELPRYGLDVGLTNYAAAYCTGLLLARRVLKSRDLDE 351 RD+ QI YA I GD+++ AAY+HELP+YG+ VGLTNYAAAYCTGLLLARR+L LD+ Sbjct: 57 RDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNKFGLDK 116 Query: 352 EYEGNVEATGEDFSVEPADER-RPFRALLDVGLIRTT 459 YEG VE TG++++VE D + F LD GL RTT Sbjct: 117 IYEGQVEVTGDEYNVESVDGKPGAFTCYLDAGLARTT 153 Score = 54.3 bits (129), Expect(2) = 7e-37 Identities = 27/58 (46%), Positives = 31/58 (53%) Frame = +3 Query: 12 RTXKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKGCHC 185 + K +AY TDY AR RL QDKNKYNTPKYR +VR TN+ C Sbjct: 4 KVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIIC 61
>RL5_HUMAN (P46777) 60S ribosomal protein L5| Length = 296 Score = 117 bits (292), Expect(2) = 2e-36 Identities = 57/97 (58%), Positives = 72/97 (74%), Gaps = 1/97 (1%) Frame = +1 Query: 172 RDVTAQIVYATIAGDIVMAAAYSHELPRYGLDVGLTNYAAAYCTGLLLARRVLKSRDLDE 351 RD+ QI YA I GD+++ AAY+HELP+YG+ VGLTNYAAAYCTGLLLARR+L +D+ Sbjct: 57 RDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDK 116 Query: 352 EYEGNVEATGEDFSVEPAD-ERRPFRALLDVGLIRTT 459 YEG VE TG++++VE D + F LD GL RTT Sbjct: 117 IYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTT 153 Score = 54.3 bits (129), Expect(2) = 2e-36 Identities = 27/58 (46%), Positives = 31/58 (53%) Frame = +3 Query: 12 RTXKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKGCHC 185 + K +AY TDY AR RL QDKNKYNTPKYR +VR TN+ C Sbjct: 4 KVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIIC 61
>RL5_BOMMO (O76190) 60S ribosomal protein L5| Length = 299 Score = 117 bits (293), Expect(2) = 3e-36 Identities = 59/100 (59%), Positives = 72/100 (72%), Gaps = 1/100 (1%) Frame = +1 Query: 163 LPTRDVTAQIVYATIAGDIVMAAAYSHELPRYGLDVGLTNYAAAYCTGLLLARRVLKSRD 342 L +DVT Q+ Y+ I GD ++ AAYSHELPRYG+ VGLTNYAAAY TGLLLARR+L+ Sbjct: 55 LSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGLLLARRLLQRLG 114 Query: 343 LDEEYEGNVEATGEDFSVEPADE-RRPFRALLDVGLIRTT 459 LD Y G + TG++++VEP D FR LDVGL RTT Sbjct: 115 LDTLYTGTTDVTGDEYNVEPVDNGPGAFRCYLDVGLARTT 154 Score = 53.5 bits (127), Expect(2) = 3e-36 Identities = 24/35 (68%), Positives = 26/35 (74%) Frame = +3 Query: 81 TDYRARLRLTNQDKNKYNTPKYRFVVRFTNKGCHC 185 TDY AR RL QDKNKYNTPKYR +VR +NK C Sbjct: 28 TDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTC 62
>RL5_MACFA (Q4R5M0) 60S ribosomal protein L5| Length = 296 Score = 115 bits (288), Expect(2) = 6e-36 Identities = 56/97 (57%), Positives = 72/97 (74%), Gaps = 1/97 (1%) Frame = +1 Query: 172 RDVTAQIVYATIAGDIVMAAAYSHELPRYGLDVGLTNYAAAYCTGLLLARRVLKSRDLDE 351 RD+ QI YA I GD+++ AAY+H+LP+YG+ VGLTNYAAAYCTGLLLARR+L +D+ Sbjct: 57 RDIICQIAYARIEGDMIVCAAYAHKLPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDK 116 Query: 352 EYEGNVEATGEDFSVEPAD-ERRPFRALLDVGLIRTT 459 YEG VE TG++++VE D + F LD GL RTT Sbjct: 117 IYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTT 153 Score = 54.3 bits (129), Expect(2) = 6e-36 Identities = 27/58 (46%), Positives = 31/58 (53%) Frame = +3 Query: 12 RTXKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKGCHC 185 + K +AY TDY AR RL QDKNKYNTPKYR +VR TN+ C Sbjct: 4 KVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIIC 61
>RL5_RAT (P09895) 60S ribosomal protein L5| Length = 296 Score = 115 bits (287), Expect(2) = 8e-36 Identities = 56/97 (57%), Positives = 71/97 (73%), Gaps = 1/97 (1%) Frame = +1 Query: 172 RDVTAQIVYATIAGDIVMAAAYSHELPRYGLDVGLTNYAAAYCTGLLLARRVLKSRDLDE 351 RD+ QI YA I GD+++ AAY+HELP+YG+ VGLTNYAAAYCTGLLLARR+L +D+ Sbjct: 57 RDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDK 116 Query: 352 EYEGNVEATGEDFSVEPAD-ERRPFRALLDVGLIRTT 459 YEG VE G++++VE D + F LD GL RTT Sbjct: 117 IYEGQVEVNGDEYNVESIDGQPGAFTCYLDAGLARTT 153 Score = 54.3 bits (129), Expect(2) = 8e-36 Identities = 27/58 (46%), Positives = 31/58 (53%) Frame = +3 Query: 12 RTXKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKGCHC 185 + K +AY TDY AR RL QDKNKYNTPKYR +VR TN+ C Sbjct: 4 KVVKNKAYFKRYQVRFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIIC 61
>RL5_MOUSE (P47962) 60S ribosomal protein L5| Length = 296 Score = 113 bits (283), Expect(2) = 2e-35 Identities = 56/97 (57%), Positives = 70/97 (72%), Gaps = 1/97 (1%) Frame = +1 Query: 172 RDVTAQIVYATIAGDIVMAAAYSHELPRYGLDVGLTNYAAAYCTGLLLARRVLKSRDLDE 351 RD+ QI YA I GD+++ AAY+HELP+YG+ VGLTNYAAAYCTGLLLARR+L +D+ Sbjct: 57 RDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDK 116 Query: 352 EYEGNVEATGEDFSVEPAD-ERRPFRALLDVGLIRTT 459 YEG VE G +++VE D + F LD GL RTT Sbjct: 117 IYEGQVEVNGGEYNVESIDGQPGAFTCYLDAGLARTT 153 Score = 54.3 bits (129), Expect(2) = 2e-35 Identities = 27/58 (46%), Positives = 31/58 (53%) Frame = +3 Query: 12 RTXKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKGCHC 185 + K +AY TDY AR RL QDKNKYNTPKYR +VR TN+ C Sbjct: 4 KVVKNKAYFKRYQVRFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIIC 61
>RL5_YEAST (P26321) 60S ribosomal protein L5 (L1) (YL3) (Ribosomal 5S| RNA-binding protein) Length = 296 Score = 109 bits (272), Expect(2) = 5e-34 Identities = 55/97 (56%), Positives = 70/97 (72%), Gaps = 1/97 (1%) Frame = +1 Query: 172 RDVTAQIVYATIAGDIVMAAAYSHELPRYGLDVGLTNYAAAYCTGLLLARRVLKSRDLDE 351 +D+ QI+ +TI GD+V+AAAYSHELPRYG+ GLTN+AAAY TGLL+ARR L+ LDE Sbjct: 57 KDIICQIISSTITGDVVLAAAYSHELPRYGITHGLTNWAAAYATGLLIARRTLQRLGLDE 116 Query: 352 EYEGNVEATGE-DFSVEPADERRPFRALLDVGLIRTT 459 Y+G E GE + + D RPF+ LD+GL RTT Sbjct: 117 TYKGVEEVEGEYELTEAVEDGPRPFKVFLDIGLQRTT 153 Score = 53.9 bits (128), Expect(2) = 5e-34 Identities = 28/58 (48%), Positives = 30/58 (51%) Frame = +3 Query: 12 RTXKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKGCHC 185 + K+ AYS TDY R RL Q K KYNTPKYR VVRFTNK C Sbjct: 4 KDAKSSAYSSRFQTPFRRRREGKTDYYQRKRLVTQHKAKYNTPKYRLVVRFTNKDIIC 61
>RL5_NEUCR (O59953) 60S ribosomal protein L5 (CPR4)| Length = 301 Score = 108 bits (271), Expect(2) = 6e-33 Identities = 60/100 (60%), Positives = 71/100 (71%), Gaps = 4/100 (4%) Frame = +1 Query: 172 RDVTAQIVYATIAGDIVMAAAYSHELPRYGLDVGLTNYAAAYCTGLLLARRVLKSRDLDE 351 RD+ QIV + I GD V A+AYSHEL YG++ GLTN+AAAY TGLLLARRVLK LDE Sbjct: 58 RDIILQIVSSEITGDKVFASAYSHELKAYGIEHGLTNWAAAYATGLLLARRVLKKLGLDE 117 Query: 352 EYEGNVEATGEDFSVEPAD----ERRPFRALLDVGLIRTT 459 ++G EA GE E A+ ERRPF+A LDVGL RT+ Sbjct: 118 TFKGVEEADGEYKLTEAAETDDGERRPFKAFLDVGLARTS 157 Score = 50.8 bits (120), Expect(2) = 6e-33 Identities = 26/51 (50%), Positives = 27/51 (52%) Frame = +3 Query: 21 KTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNK 173 K AY TDY AR RL Q KNKYN PKYR VVRFTN+ Sbjct: 8 KNSAYYSRFQTKYKRRREGKTDYYARKRLITQAKNKYNAPKYRLVVRFTNR 58
>RL5_PIG (Q95276) 60S ribosomal protein L5 (Fragment)| Length = 124 Score = 90.5 bits (223), Expect(2) = 2e-28 Identities = 42/67 (62%), Positives = 52/67 (77%) Frame = +1 Query: 172 RDVTAQIVYATIAGDIVMAAAYSHELPRYGLDVGLTNYAAAYCTGLLLARRVLKSRDLDE 351 RD+ QI YA I GD+++ AAY+HELP+YG+ VGLTNYAAAYCTGLLLARR+L + + Sbjct: 57 RDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMXK 116 Query: 352 EYEGNVE 372 Y G VE Sbjct: 117 IYGGQVE 123 Score = 54.3 bits (129), Expect(2) = 2e-28 Identities = 27/58 (46%), Positives = 31/58 (53%) Frame = +3 Query: 12 RTXKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKGCHC 185 + K +AY TDY AR RL QDKNKYNTPKYR +VR TN+ C Sbjct: 4 KVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIIC 61
>RL5B_SCHPO (O74306) 60S ribosomal protein L5-B| Length = 294 Score = 89.7 bits (221), Expect(2) = 9e-27 Identities = 50/97 (51%), Positives = 63/97 (64%), Gaps = 1/97 (1%) Frame = +1 Query: 172 RDVTAQIVYATIAGDIVMAAAYSHELPRYGLDVGLTNYAAAYCTGLLLARRVLKSRDLDE 351 R VT QIV + + GD V+A A+S ELPRYG+ GL N+ AAY TGLL+ARR L L + Sbjct: 58 RFVTCQIVSSRVNGDYVLAHAHSSELPRYGIKWGLANWTAAYATGLLVARRALAKVGLAD 117 Query: 352 EYEGNVEATGE-DFSVEPADERRPFRALLDVGLIRTT 459 +YEG E GE + + D RPF+ LDVGL RT+ Sbjct: 118 KYEGVTEPEGEFELTEAIEDGPRPFKVFLDVGLKRTS 154 Score = 49.3 bits (116), Expect(2) = 9e-27 Identities = 23/35 (65%), Positives = 25/35 (71%) Frame = +3 Query: 81 TDYRARLRLTNQDKNKYNTPKYRFVVRFTNKGCHC 185 TDY AR RL Q KNKYN PKYR VVRF+N+ C Sbjct: 28 TDYYARKRLIAQAKNKYNAPKYRLVVRFSNRFVTC 62
>RL5A_SCHPO (P52822) 60S ribosomal protein L5-A| Length = 294 Score = 89.7 bits (221), Expect(2) = 9e-27 Identities = 50/97 (51%), Positives = 63/97 (64%), Gaps = 1/97 (1%) Frame = +1 Query: 172 RDVTAQIVYATIAGDIVMAAAYSHELPRYGLDVGLTNYAAAYCTGLLLARRVLKSRDLDE 351 R VT QIV + + GD V+A A+S ELPRYG+ GL N+ AAY TGLL+ARR L L + Sbjct: 58 RFVTCQIVSSRVNGDYVLAHAHSSELPRYGIKWGLANWTAAYATGLLVARRALAKVGLAD 117 Query: 352 EYEGNVEATGE-DFSVEPADERRPFRALLDVGLIRTT 459 +YEG E GE + + D RPF+ LDVGL RT+ Sbjct: 118 KYEGVTEPEGEFELTEAIEDGPRPFKVFLDVGLKRTS 154 Score = 49.3 bits (116), Expect(2) = 9e-27 Identities = 23/35 (65%), Positives = 25/35 (71%) Frame = +3 Query: 81 TDYRARLRLTNQDKNKYNTPKYRFVVRFTNKGCHC 185 TDY AR RL Q KNKYN PKYR VVRF+N+ C Sbjct: 28 TDYYARKRLIAQAKNKYNAPKYRLVVRFSNRFVTC 62
>RL18_METTH (O26130) 50S ribosomal protein L18P| Length = 192 Score = 42.4 bits (98), Expect(2) = 8e-05 Identities = 23/57 (40%), Positives = 33/57 (57%) Frame = +1 Query: 163 LPTRDVTAQIVYATIAGDIVMAAAYSHELPRYGLDVGLTNYAAAYCTGLLLARRVLK 333 + T V AQI+ + GD + +A+S +L + G G +N AAAY TG L +R LK Sbjct: 39 ITTYHVIAQIINVGMNGDETLVSAHSKQLQKMGWLGGTSNTAAAYLTGYLCGKRALK 95 Score = 22.3 bits (46), Expect(2) = 8e-05 Identities = 13/29 (44%), Positives = 15/29 (51%) Frame = +3 Query: 81 TDYRARLRLTNQDKNKYNTPKYRFVVRFT 167 TDYRAR ++ T K R VVR T Sbjct: 19 TDYRARYKMV-------ETGKSRLVVRIT 40
>RL18_METAC (Q8TRS8) 50S ribosomal protein L18P| Length = 174 Score = 44.7 bits (104), Expect = 1e-04 Identities = 32/92 (34%), Positives = 46/92 (50%) Frame = +1 Query: 169 TRDVTAQIVYATIAGDIVMAAAYSHELPRYGLDVGLTNYAAAYCTGLLLARRVLKSRDLD 348 +R+V Q++ T GDI ++A S+EL +YG N AAY TGLL LKS L Sbjct: 41 SRNVQIQLIAPTPDGDITYSSAVSNELAKYGYTGATGNTTAAYLTGLLFG---LKS--LQ 95 Query: 349 EEYEGNVEATGEDFSVEPADERRPFRALLDVG 444 + YEG + G S + + ++D G Sbjct: 96 KGYEGGILDIGLQASSAGSRVYAALKGVVDSG 127
>RL18_METMP (Q6LXD4) 50S ribosomal protein L18P| Length = 193 Score = 41.6 bits (96), Expect = 0.001 Identities = 22/53 (41%), Positives = 32/53 (60%) Frame = +1 Query: 175 DVTAQIVYATIAGDIVMAAAYSHELPRYGLDVGLTNYAAAYCTGLLLARRVLK 333 +VTAQ++ GD+V+ +A+S EL + G N AAY TGLLL + +K Sbjct: 43 NVTAQLMAYDEKGDVVLVSAHSKELVKMGYKGHCGNLPAAYLTGLLLGAKAVK 95
>RL18_SULTO (Q975J9) 50S ribosomal protein L18P| Length = 196 Score = 40.4 bits (93), Expect = 0.002 Identities = 34/99 (34%), Positives = 46/99 (46%), Gaps = 4/99 (4%) Frame = +1 Query: 163 LPTRDVTAQIVYATIAGDIVMAAAYSHEL-PRYGLDVGLTNYAAAYCTGLLLARRVLKSR 339 L + + AQI GD+++ AA+S EL ++G L N AAY TG LL R LK+ Sbjct: 39 LTNKYIIAQIAKFNPKGDVIVVAAHSMELAKKFGWKGDLNNTPAAYLTGYLLGVRALKA- 97 Query: 340 DLDEEYEGNVEATGEDFSVEPADERRPFRAL---LDVGL 447 G EA + P R F A+ +D GL Sbjct: 98 -------GIKEAVADIGLFVPVKGSRIFTAIKGAIDAGL 129
>RL18_HALSA (P50562) 50S ribosomal protein L18P (HCuL18) (HSal18) (HHal18)| (HL13) Length = 182 Score = 39.7 bits (91), Expect = 0.004 Identities = 22/53 (41%), Positives = 30/53 (56%) Frame = +1 Query: 172 RDVTAQIVYATIAGDIVMAAAYSHELPRYGLDVGLTNYAAAYCTGLLLARRVL 330 + VTAQ+V GD +A+A+S +L YG N AAY TGLL +R + Sbjct: 41 KHVTAQLVTTGPDGDETVASAHSSDLDAYGWAAPTGNLPAAYLTGLLAGQRAV 93
>RL18_METVA (P14033) 50S ribosomal protein L18P| Length = 195 Score = 39.3 bits (90), Expect = 0.005 Identities = 20/53 (37%), Positives = 32/53 (60%) Frame = +1 Query: 175 DVTAQIVYATIAGDIVMAAAYSHELPRYGLDVGLTNYAAAYCTGLLLARRVLK 333 ++ AQ++ GDIV+ +A+S EL + G N AAY TGLLL ++ ++ Sbjct: 45 NIIAQLMAYDEKGDIVLVSAHSRELVKMGYKGHCGNLPAAYLTGLLLGKKAVE 97
>RL5_RABIT (P19949) 60S ribosomal protein L5 (Fragments)| Length = 101 Score = 37.4 bits (85), Expect = 0.019 Identities = 19/45 (42%), Positives = 22/45 (48%) Frame = +3 Query: 12 RTXKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKY 146 + K +AY TDY AR RL QDKNKYNTP + Sbjct: 4 KVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPAH 48
>RL18_ARCFU (O28373) 50S ribosomal protein L18P| Length = 189 Score = 37.0 bits (84), Expect = 0.025 Identities = 22/57 (38%), Positives = 30/57 (52%) Frame = +1 Query: 163 LPTRDVTAQIVYATIAGDIVMAAAYSHELPRYGLDVGLTNYAAAYCTGLLLARRVLK 333 + R V AQIV GD V+ S L +G L N AAY TG+L+A++ L+ Sbjct: 41 ITNRRVIAQIVEYAPEGDRVVVGVDSAMLREFGWKGDLNNTPAAYLTGILIAKKALQ 97
>SRY_MOUSE (Q05738) Sex-determining region Y protein (Testis-determining| factor) Length = 395 Score = 37.0 bits (84), Expect = 0.025 Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 1/89 (1%) Frame = -2 Query: 439 HPRAHGKASSHQQAQQR-SPHQWPQHCLHTPHPDHGT*AHDEPKADQCSRLQHSW*VQRQ 263 H + + HQQ QQ+ HQ QH H HP HD P+ Q H +Q Sbjct: 254 HHQQQQQFHDHQQQQQQFHDHQQQQHQFH-DHPQQKQQFHDHPQQQQQFHDHH----HQQ 308 Query: 262 DHSEATHGSRQQPSRYHQQW*HKQFGQ*H 176 + H QQ ++H H+Q Q H Sbjct: 309 QQKQQFHDHHQQKQQFHDH--HQQKQQFH 335 Score = 32.3 bits (72), Expect = 0.61 Identities = 22/78 (28%), Positives = 28/78 (35%) Frame = -2 Query: 409 HQQAQQRSPHQWPQHCLHTPHPDHGT*AHDEPKADQCSRLQHSW*VQRQDHSEATHGSRQ 230 HQQ QQ H Q H H H + Q H Q+Q + H Q Sbjct: 186 HQQKQQFHDHHQQQQQFHDHHHHHQEQQFHDHHQQQQQFHDHQQ-QQQQQQQQQFHDHHQ 244 Query: 229 QPSRYHQQW*HKQFGQ*H 176 Q ++H H+Q Q H Sbjct: 245 QKQQFHDHHHHQQQQQFH 262
>RL18_HALMA (P14123) 50S ribosomal protein L18P (Hmal18) (Hl12)| Length = 186 Score = 36.6 bits (83), Expect = 0.032 Identities = 20/51 (39%), Positives = 28/51 (54%) Frame = +1 Query: 172 RDVTAQIVYATIAGDIVMAAAYSHELPRYGLDVGLTNYAAAYCTGLLLARR 324 + V AQ+V GD +A+A+S +L YG + N +AY TGLL R Sbjct: 41 KHVRAQLVTLGPNGDDTLASAHSSDLAEYGWEAPTGNMPSAYLTGLLAGLR 91
>GBF_DICDI (P36417) G-box-binding factor (GBF)| Length = 708 Score = 36.2 bits (82), Expect = 0.042 Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 2/89 (2%) Frame = -2 Query: 442 QHPRAHGKASSHQQAQQRSPH--QWPQHCLHTPHPDHGT*AHDEPKADQCSRLQHSW*VQ 269 QH + + HQQ QQ+ H Q Q H H H Q + QH Q Sbjct: 148 QHHQQMQQQQHHQQMQQQQQHHQQMQQQQHHQQMQHHQLQQHQHQHQQQQQQQQH----Q 203 Query: 268 RQDHSEATHGSRQQPSRYHQQW*HKQFGQ 182 +Q H + +QQ ++HQQ H Q Q Sbjct: 204 QQHHQQ----QQQQQQQHHQQQQHHQHSQ 228 Score = 30.0 bits (66), Expect = 3.0 Identities = 23/86 (26%), Positives = 29/86 (33%), Gaps = 2/86 (2%) Frame = -2 Query: 442 QHPRAHGKASSHQQAQQRSPHQWPQHCLHTPHPDHGT*AHDEPKADQCSRLQHSW*VQRQ 263 QH + HQQ QQ+ HQ H + Q + QH Q Sbjct: 182 QHHQLQQHQHQHQQQQQQQQHQQQHH-----------------QQQQQQQQQHHQQQQHH 224 Query: 262 DHS--EATHGSRQQPSRYHQQW*HKQ 191 HS + H QQ H Q H+Q Sbjct: 225 QHSQPQQQHQHNQQQQHQHNQQQHQQ 250 Score = 29.3 bits (64), Expect = 5.1 Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 5/80 (6%) Frame = -2 Query: 406 QQAQQRSPHQWPQHCLHTPHPDHGT*AHDEPKADQCSRLQHSW*VQRQDH-----SEATH 242 QQAQQ P Q Q H H + Q + QH +Q+Q H + H Sbjct: 123 QQAQQNQPPQQNQQQQH----------HQQ----QQQQPQHHQQMQQQQHHQQMQQQQQH 168 Query: 241 GSRQQPSRYHQQW*HKQFGQ 182 + Q ++HQQ H Q Q Sbjct: 169 HQQMQQQQHHQQMQHHQLQQ 188
>RL18_THEVO (Q97BV7) 50S ribosomal protein L18P| Length = 160 Score = 27.7 bits (60), Expect(2) = 0.079 Identities = 12/48 (25%), Positives = 23/48 (47%) Frame = +1 Query: 163 LPTRDVTAQIVYATIAGDIVMAAAYSHELPRYGLDVGLTNYAAAYCTG 306 + + + AQI ++ GD ++A L +YG+++ N Y G Sbjct: 31 ITNKGIIAQIAEYSVNGDRILATITDKALSKYGIELRGNNLQICYLVG 78 Score = 26.6 bits (57), Expect(2) = 0.079 Identities = 15/32 (46%), Positives = 16/32 (50%) Frame = +3 Query: 81 TDYRARLRLTNQDKNKYNTPKYRFVVRFTNKG 176 TDY RLRL RF+VR TNKG Sbjct: 11 TDYGRRLRLLKSKDR-------RFIVRITNKG 35
>HR4_DROME (Q9W539) Hormone receptor 4 (dHR4)| Length = 1518 Score = 33.9 bits (76), Expect = 0.21 Identities = 30/109 (27%), Positives = 40/109 (36%), Gaps = 9/109 (8%) Frame = -2 Query: 427 HGKASSHQQAQQRSPHQWPQHCLHTPH--------PDHGT*AHDEPKADQCSRLQHSW*V 272 H QQ QQ S Q Q H+PH P+ G Q LQH Sbjct: 501 HHLLGQQQQQQQASHPQQQQQQQHSPHSLVRVKKEPNVGQRHLSPHHQQQSPLLQHHQQQ 560 Query: 271 QRQDHSEATHGSRQQPSRYHQQW*HKQFGQ*HPL-LVNRTTKRYLGVLY 128 Q+Q + H +QQ + H Q + HP L R + R +L+ Sbjct: 561 QQQQQQQQQHLHQQQQQQQHHQQQPQALALMHPASLALRNSNRDAAILF 609
>SRY_MUSSP (Q62563) Sex-determining region Y protein (Testis-determining| factor) Length = 355 Score = 33.9 bits (76), Expect = 0.21 Identities = 24/80 (30%), Positives = 28/80 (35%) Frame = -2 Query: 445 DQHPRAHGKASSHQQAQQRSPHQWPQHCLHTPHPDHGT*AHDEPKADQCSRLQHSW*VQR 266 D H + HQQ QQ HQ Q H H HD + Q H Q+ Sbjct: 162 DHHQQKQQFHDHHQQQQQFHDHQQQQQQFH-DHQQQKQQFHDHQQQQQQFHDHHHQQQQQ 220 Query: 265 QDHSEATHGSRQQPSRYHQQ 206 Q H H +QQ H Q Sbjct: 221 QFHDHHHHQQQQQQFHDHHQ 240 Score = 31.6 bits (70), Expect = 1.0 Identities = 24/79 (30%), Positives = 29/79 (36%), Gaps = 1/79 (1%) Frame = -2 Query: 409 HQQAQQ-RSPHQWPQHCLHTPHPDHGT*AHDEPKADQCSRLQHSW*VQRQDHSEATHGSR 233 HQQ QQ HQ Q HP HD P+ Q H Q + H Sbjct: 239 HQQKQQFHDHHQQQQQQQFHDHPQQQQQFHDHPQQKQQFHDHH----HHQQQKQQFHDHH 294 Query: 232 QQPSRYHQQW*HKQFGQ*H 176 QQ ++H H+Q Q H Sbjct: 295 QQKQQFHDH--HQQQQQFH 311 Score = 30.8 bits (68), Expect = 1.8 Identities = 24/81 (29%), Positives = 30/81 (37%), Gaps = 1/81 (1%) Frame = -2 Query: 445 DQHPRAHGKASSHQQAQQRSPHQWPQHCLH-TPHPDHGT*AHDEPKADQCSRLQHSW*VQ 269 D H + HQQ QQ+ H PQ HP HD Q + H Q Sbjct: 237 DHHQQKQQFHDHHQQQQQQQFHDHPQQQQQFHDHPQQKQQFHDHHHHQQQKQQFHDHHQQ 296 Query: 268 RQDHSEATHGSRQQPSRYHQQ 206 +Q + H +QQ HQQ Sbjct: 297 KQQFHD--HHQQQQQFHDHQQ 315
>SRY_MUSSI (Q62565) Sex-determining region Y protein (Testis-determining| factor) Length = 311 Score = 33.5 bits (75), Expect = 0.27 Identities = 26/81 (32%), Positives = 31/81 (38%), Gaps = 3/81 (3%) Frame = -2 Query: 409 HQQAQQRSPHQWPQHCLHTPHPDHGT*AHDEPKADQCSRLQHSW*VQRQDH---SEATHG 239 HQQ QQ HQ Q LH H HD P+ Q Q DH + H Sbjct: 199 HQQQQQFHDHQQQQQQLHNHHHQQQQQFHDYPQQQQ----------QFHDHPQQKQQFHD 248 Query: 238 SRQQPSRYHQQW*HKQFGQ*H 176 QQ ++H H+Q Q H Sbjct: 249 RPQQQQQFHDH--HQQQQQFH 267 Score = 32.0 bits (71), Expect = 0.79 Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 1/79 (1%) Frame = -2 Query: 439 HPRAHGKASSHQQAQQRSPHQWPQHCLHT-PHPDHGT*AHDEPKADQCSRLQHSW*VQRQ 263 H + + +H QQ+ H +PQ HP HD P+ Q H Q+Q Sbjct: 208 HQQQQQQLHNHHHQQQQQFHDYPQQQQQFHDHPQQKQQFHDRPQQQQQFHDHHQ--QQQQ 265 Query: 262 DHSEATHGSRQQPSRYHQQ 206 H H +QQ ++H Q Sbjct: 266 FHD---HHHQQQQQQFHDQ 281
>LP61_EIMTE (P15714) Antigen LPMC-61 (Fragment)| Length = 255 Score = 33.1 bits (74), Expect = 0.36 Identities = 22/92 (23%), Positives = 33/92 (35%), Gaps = 12/92 (13%) Frame = -2 Query: 442 QHPRAHGKASSHQQAQQRSPHQWPQHCLHTPHPDHGT*AHDEPKADQC-----SRLQHSW 278 Q P+ + QQ Q + QWPQ H + + + QC +LQ W Sbjct: 82 QQPQMQQEQWPQQQPQVQQQQQWPQQQHRRQHGQQQQCMNSQQQLQQCGQQQQQQLQQQW 141 Query: 277 *VQRQDHSE-------ATHGSRQQPSRYHQQW 203 Q+Q + +Q P + QQW Sbjct: 142 SEQQQQQQQQQWPEQPEQQQQQQWPEQQQQQW 173 Score = 28.5 bits (62), Expect = 8.7 Identities = 23/87 (26%), Positives = 31/87 (35%), Gaps = 6/87 (6%) Frame = -2 Query: 445 DQHPRAHGKASSHQQAQQRSPHQWPQHCLHT------PHPDHGT*AHDEPKADQCSRLQH 284 +QH +A + QQ Q QWPQ P H H + + S+ Q Sbjct: 68 EQHQQAQQQQQWPQQQPQMQQEQWPQQQPQVQQQQQWPQQQHRR-QHGQQQQCMNSQQQL 126 Query: 283 SW*VQRQDHSEATHGSRQQPSRYHQQW 203 Q+Q S QQ + QQW Sbjct: 127 QQCGQQQQQQLQQQWSEQQQQQQQQQW 153
>RL18_METJA (P54044) 50S ribosomal protein L18P| Length = 195 Score = 33.1 bits (74), Expect = 0.36 Identities = 19/49 (38%), Positives = 26/49 (53%) Frame = +1 Query: 184 AQIVYATIAGDIVMAAAYSHELPRYGLDVGLTNYAAAYCTGLLLARRVL 330 AQIV GD + +A+S EL + G N +AY TG LL ++ L Sbjct: 46 AQIVLYDEKGDKTVVSAHSRELIKLGYKGHTGNLPSAYLTGYLLGKKAL 94
>RL18_SULAC (O05640) 50S ribosomal protein L18P| Length = 197 Score = 32.7 bits (73), Expect = 0.46 Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Frame = +1 Query: 211 GDIVMAAAYSHEL-PRYGLDVGLTNYAAAYCTGLLLARRVLKS 336 GDI++A A+S EL +YG N AAY TG L R +KS Sbjct: 55 GDIMIAYAHSIELVKKYGWKGDTNNTPAAYLTGYLAGLRAVKS 97
>RL18_PYRAE (Q8ZVV7) 50S ribosomal protein L18P| Length = 205 Score = 32.3 bits (72), Expect = 0.61 Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 5/57 (8%) Frame = +1 Query: 172 RDVTAQIVYATIAGDIVMAAAYSHELPRYGLDVGLTNYAAAYCTGLLL-----ARRV 327 + + AQIV A GD+ + A + L ++G N AAAY GL++ ARRV Sbjct: 42 KHIIAQIVVAKPQGDVTIVGADTRILAKFGWRGDENNVAAAYLLGLVVGYKARARRV 98
>VID21_NEUCR (Q7SBU6) Chromatin modification-related protein vid-21| Length = 2189 Score = 32.0 bits (71), Expect = 0.79 Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 3/76 (3%) Frame = -2 Query: 409 HQQAQQRSPHQWPQHCLHTPHPDH---GT*AHDEPKADQCSRLQHSW*VQRQDHSEATHG 239 H Q + +P+ QH HT H AH + Q +Q +Q Q H + HG Sbjct: 1862 HAQHSRHTPNS--QHAQHTQQAQHARNAQQAHHTQQVQQAQHVQQPQGLQGQRHGQ-VHG 1918 Query: 238 SRQQPSRYHQQW*HKQ 191 + QQ HQQ H+Q Sbjct: 1919 NGQQ---LHQQHQHQQ 1931 Score = 30.0 bits (66), Expect = 3.0 Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 11/77 (14%) Frame = -2 Query: 403 QAQQRSPHQWPQHCLHTPHPDHGT*AHDEPKADQCSRLQHSW*VQRQDHSEA-------- 248 Q Q++P PQ + TPH A +A + QH Q+Q H +A Sbjct: 1748 QQSQKTPQMQPQQQVQTPH-QQAQKAQQSQQAQLAQQQQHQQQQQQQQHGQAQSQGQIQG 1806 Query: 247 ---THGSRQQPSRYHQQ 206 G Q P + H Q Sbjct: 1807 QGQAPGQGQAPGQGHAQ 1823
>HRG_BOVIN (P33433) Histidine-rich glycoprotein (Histidine-proline-rich| glycoprotein) (HPRG) (Fragments) Length = 396 Score = 32.0 bits (71), Expect = 0.79 Identities = 21/75 (28%), Positives = 25/75 (33%) Frame = -2 Query: 436 PRAHGKASSHQQAQQRSPHQWPQHCLHTPHPDHGT*AHDEPKADQCSRLQHSW*VQRQDH 257 P H S Q R+P +P L PHP GT + P D S H H Sbjct: 215 PLEHKNHSDSPPFQARAPLPFPPPGLRCPHPPFGTKGNHRPPHDHSSDEHH----PHGHH 270 Query: 256 SEATHGSRQQPSRYH 212 H P +H Sbjct: 271 PHGHHPHGHHPHGHH 285
>OMB_DROME (Q24432) Optomotor-blind protein (Lethal(1)optomotor-blind) (L(1)omb)| (Protein bifid) Length = 972 Score = 31.6 bits (70), Expect = 1.0 Identities = 15/39 (38%), Positives = 18/39 (46%) Frame = -2 Query: 439 HPRAHGKASSHQQAQQRSPHQWPQHCLHTPHPDHGT*AH 323 H +AH + HQ Q+ HQ P PHP H T H Sbjct: 926 HTQAHHQQQQHQSHHQQQHHQQPAQ----PHPHHQTHLH 960 Score = 29.3 bits (64), Expect = 5.1 Identities = 16/51 (31%), Positives = 23/51 (45%) Frame = -2 Query: 325 HDEPKADQCSRLQHSW*VQRQDHSEATHGSRQQPSRYHQQW*HKQFGQ*HP 173 H+ A + LQ + + H H +QQ +HQQ H+Q Q HP Sbjct: 903 HNGSAAAAAAALQLAEEAAQHHHHTQAHHQQQQHQSHHQQQHHQQPAQPHP 953
>FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3| Length = 623 Score = 31.2 bits (69), Expect = 1.3 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 3/50 (6%) Frame = -2 Query: 442 QHPRAHGKASSHQQ---AQQRSPHQWPQHCLHTPHPDHGT*AHDEPKADQ 302 QHP H + S Q +Q PHQ H H P+ H T AH P Q Sbjct: 399 QHPAPHPQQHSQLQPPHSQHPPPHQ---HIQHHPNHQHQTLAHQPPPPPQ 445 Score = 30.0 bits (66), Expect = 3.0 Identities = 23/81 (28%), Positives = 29/81 (35%), Gaps = 6/81 (7%) Frame = -2 Query: 418 ASSHQQAQQRSPHQWPQHCLHTPHPDHGT*AHDE------PKADQCSRLQHSW*VQRQDH 257 ++S Q P PQ HTPH HG H + P Q S+LQ H Sbjct: 363 SNSVAQVSLSHPQMHPQPSPHTPHRPHGLPQHPQRPQHPAPHPQQHSQLQPPHSQHPPPH 422 Query: 256 SEATHGSRQQPSRYHQQW*HK 194 H P+ HQ H+ Sbjct: 423 QHIQH----HPNHQHQTLAHQ 439
>RL18_METKA (Q8TZA5) 50S ribosomal protein L18P| Length = 202 Score = 31.2 bits (69), Expect = 1.3 Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Frame = +1 Query: 184 AQIVYATIAGDIVMAAAYSHEL-PRYGLDVGLTNYAAAYCTGLLLARRVLK 333 AQIV GD+ +A+A+S EL ++G N AAY TG L R L+ Sbjct: 49 AQIVDFAPHGDVTLASAHSIELRNKFGWKGHCGNTPAAYLTGYLCGLRALE 99
>PSV_DICDI (P08798) Prespore vesicle protein precursor (PSV)| Length = 513 Score = 31.2 bits (69), Expect = 1.3 Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 1/81 (1%) Frame = -2 Query: 436 PRAHGKASSHQQAQQRS-PHQWPQHCLHTPHPDHGT*AHDEPKADQCSRLQHSW*VQRQD 260 P HGK + H QQ + P Q + H H A + QH Q+Q Sbjct: 302 PAQHGKPAQHATQQQHAKPAQNAKPVQHNAQQQHAKPAQHAAQQQHAKPAQHVAQQQQQQ 361 Query: 259 HSEATHGSRQQPSRYHQQW*H 197 H++ + +P +++ Q H Sbjct: 362 HAKPAAHTAAKPVQHNAQQQH 382
>FOXJ3_HUMAN (Q9UPW0) Forkhead box protein J3| Length = 622 Score = 30.8 bits (68), Expect = 1.8 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 6/53 (11%) Frame = -2 Query: 442 QHPRAHGKASSH--QQAQQRSPH-QWP---QHCLHTPHPDHGT*AHDEPKADQ 302 QHP+ + H Q +Q +SPH Q P QH H P+ H T H P Q Sbjct: 392 QHPQRSPHPAPHPQQHSQLQSPHPQHPSPHQHIQHHPNHQHQTLTHQAPPPPQ 444 Score = 30.4 bits (67), Expect = 2.3 Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 12/46 (26%) Frame = -2 Query: 439 HPRAHGKASSHQ--------QAQQRSPHQWP---QHC-LHTPHPDH 338 HP+ H + S H Q QRSPH P QH L +PHP H Sbjct: 372 HPQMHPQPSPHPPHRPHGLPQHPQRSPHPAPHPQQHSQLQSPHPQH 417 Score = 28.5 bits (62), Expect = 8.7 Identities = 22/81 (27%), Positives = 28/81 (34%), Gaps = 6/81 (7%) Frame = -2 Query: 418 ASSHQQAQQRSPHQWPQHCLHTPHPDHGT*AHDE------PKADQCSRLQHSW*VQRQDH 257 ++S Q P PQ H PH HG H + P Q S+LQ H Sbjct: 362 SNSVAQVSLSHPQMHPQPSPHPPHRPHGLPQHPQRSPHPAPHPQQHSQLQSPHPQHPSPH 421 Query: 256 SEATHGSRQQPSRYHQQW*HK 194 H P+ HQ H+ Sbjct: 422 QHIQH----HPNHQHQTLTHQ 438
>NIPB_DROME (Q7PLI2) Nipped-B protein (SCC2 homolog)| Length = 2077 Score = 30.0 bits (66), Expect = 3.0 Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 2/40 (5%) Frame = +1 Query: 325 VLKSRDLDEEYEGNVEATGEDFSVEPADERRPF--RALLD 438 +++S L++E EG+V + + F +EP ++R F + LLD Sbjct: 936 MIQSIKLEQEKEGDVTSNNDQFDLEPEEQRTDFLQKILLD 975
>PXDC1_HUMAN (Q8IUK5) Plexin domain-containing protein 1 precursor (Tumor| endothelial marker 7) (Tumor endothelial marker 3) Length = 500 Score = 30.0 bits (66), Expect = 3.0 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = -2 Query: 394 QRSPHQWPQHCLHTPHPDHGT*AHDEPKADQ 302 +R PH WP + HPDH T A EP + Sbjct: 461 ERRPHHWPAMKFRS-HPDHSTYAEVEPSGHE 490
>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor| Length = 351 Score = 30.0 bits (66), Expect = 3.0 Identities = 18/83 (21%), Positives = 24/83 (28%) Frame = -2 Query: 445 DQHPRAHGKASSHQQAQQRSPHQWPQHCLHTPHPDHGT*AHDEPKADQCSRLQHSW*VQR 266 + H H + H + PH +H H PHP H H H Sbjct: 68 EHHEPHHEEHHHHHPEEHHEPHH-EEHHHHHPHPHHHHHHHPPHHHHHLGHHHHHHHAAH 126 Query: 265 QDHSEATHGSRQQPSRYHQQW*H 197 H E H +H + H Sbjct: 127 HHHHEEHHHHHHAAHHHHHEEHH 149
>LTBP2_MOUSE (O08999) Latent transforming growth factor beta-binding protein 2| precursor (LTBP-2) Length = 1813 Score = 30.0 bits (66), Expect = 3.0 Identities = 20/51 (39%), Positives = 23/51 (45%) Frame = +3 Query: 195 LCYHCW*YRDGCCLLP*VASLWS*RWTHQLCCSLLHWSAFGSSCAQVP*SG 347 LCY G C LP V R T Q+CC A+GS+C Q P G Sbjct: 660 LCYRS--LGSGTCTLPLVH-----RITKQICCCSRVGKAWGSTCEQCPLPG 703
>VA31_VACCV (P24760) Protein A31| Length = 124 Score = 30.0 bits (66), Expect = 3.0 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 5/57 (8%) Frame = -3 Query: 330 EHTTSQKQTSAVGCS-----IVGESNVKTIARQLMGVGSSHHDITSNGSINNLGSDI 175 +H+T K S G ++G+ + + L + S+H +TS+G+I LGS I Sbjct: 43 KHSTVVKYLSGGGIYHDDLVVLGKVTINNLKMMLFYMDLSYHGVTSSGAIYKLGSSI 99
>UCKL1_MOUSE (Q91YL3) Uridine/cytidine kinase-like 1| Length = 548 Score = 30.0 bits (66), Expect = 3.0 Identities = 20/73 (27%), Positives = 30/73 (41%) Frame = -3 Query: 459 RSPDKTNIQERTERPPLISRLNREVLTSGLNIAFILLIQITGLEHTTSQKQTSAVGCSIV 280 RSP K + PPL+ R + T+G + EH T K+ A+G Sbjct: 55 RSPRKRTTSQCKSEPPLLRTSKRTIYTAGRPPWY--------NEHGTQSKEAFAIGLGGG 106 Query: 279 GESNVKTIARQLM 241 S T+AR ++ Sbjct: 107 SASGKTTVARMII 119
>UCKL1_HUMAN (Q9NWZ5) Uridine/cytidine kinase-like 1| Length = 548 Score = 30.0 bits (66), Expect = 3.0 Identities = 20/73 (27%), Positives = 30/73 (41%) Frame = -3 Query: 459 RSPDKTNIQERTERPPLISRLNREVLTSGLNIAFILLIQITGLEHTTSQKQTSAVGCSIV 280 RSP K + PPL+ R + T+G + EH T K+ A+G Sbjct: 55 RSPRKRTTSQCKSEPPLLRTSKRTIYTAGRPPWY--------NEHGTQSKEAFAIGLGGG 106 Query: 279 GESNVKTIARQLM 241 S T+AR ++ Sbjct: 107 SASGKTTVARMII 119
>Y1747_RHOPA (P61788) UPF0317 protein RPA1747| Length = 272 Score = 29.6 bits (65), Expect = 3.9 Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 5/25 (20%) Frame = -1 Query: 104 PQPCPVVGL-----PLTPSLELDLE 45 P+PCP+VG+ P+ PSL +DL+ Sbjct: 65 PKPCPIVGMSDVGNPMIPSLGIDLD 89
>PALA_MAGGR (Q51NJ3) pH-response regulator protein palA/RIM20| Length = 849 Score = 29.3 bits (64), Expect = 5.1 Identities = 12/44 (27%), Positives = 21/44 (47%) Frame = -2 Query: 409 HQQAQQRSPHQWPQHCLHTPHPDHGT*AHDEPKADQCSRLQHSW 278 + Q QQ+ P PQ H+ + D G+ +P+ + Q +W Sbjct: 764 YSQQQQQQPRSPPQEAHHSAYADTGSMPPQQPRPLPAANAQQTW 807
>SYNE1_HUMAN (Q8NF91) Nesprin-1 (Nuclear envelope spectrin repeat protein 1)| (Synaptic nuclear envelope protein 1) (Syne-1) (Myocyte nuclear envelope protein 1) (Myne-1) (Enaptin) Length = 8797 Score = 29.3 bits (64), Expect = 5.1 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = -3 Query: 276 ESNVKTIARQLMGVGSSHHDITSNGSINNLGSDI 175 E+N +T+ R L GSSH S S+ +L S++ Sbjct: 1346 ETNKETVVRYLFQTGSSHERFLSFSSLESLSSEL 1379
>PXDC1_MOUSE (Q91ZV7) Plexin domain-containing protein 1 precursor (Tumor| endothelial marker 7) Length = 500 Score = 29.3 bits (64), Expect = 5.1 Identities = 12/31 (38%), Positives = 15/31 (48%) Frame = -2 Query: 394 QRSPHQWPQHCLHTPHPDHGT*AHDEPKADQ 302 +R PH WP H HP+H T EP + Sbjct: 461 ERRPHHWPAMKFHN-HPNHSTYTEVEPSGHE 490
>SMI1_YARLI (Q6CDX0) KNR4/SMI1 homolog| Length = 713 Score = 29.3 bits (64), Expect = 5.1 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = -2 Query: 442 QHPRAHGKASSHQQAQQRSPHQWPQHCLHTPHPDH 338 +H R A++ QQ QQ+ H Q LH+P P H Sbjct: 407 EHERRQAAAAAQQQQQQQQHHA--QGGLHSPSPQH 439
>RL18_NANEQ (Q74MJ4) 50S ribosomal protein L18P| Length = 195 Score = 29.3 bits (64), Expect = 5.1 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +1 Query: 175 DVTAQIVYATIAGDIVMAAAYSHELPRYGLDVGLTNYAAAYCTGLLLARRVLK 333 ++ AQ+V GD V+ +S+ L +YG N +AY GL+ LK Sbjct: 43 NILAQLVEYDPKGDRVIFTIHSNVLKKYGWKGHRGNLPSAYLVGLIAGYEALK 95
>TRPA_MYCTU (P66980) Tryptophan synthase alpha chain (EC 4.2.1.20)| Length = 270 Score = 28.9 bits (63), Expect = 6.7 Identities = 18/55 (32%), Positives = 27/55 (49%) Frame = +1 Query: 148 ALSCDLPTRDVTAQIVYATIAGDIVMAAAYSHELPRYGLDVGLTNYAAAYCTGLL 312 AL + RD A + +IAG + Y + + RYG+D + AAA GL+ Sbjct: 79 ALRGGVRVRDTLAAVEAISIAGGRAVVMTYWNPVLRYGVDAFARDLAAAGGLGLI 133
>TRPA_MYCBO (P66981) Tryptophan synthase alpha chain (EC 4.2.1.20)| Length = 270 Score = 28.9 bits (63), Expect = 6.7 Identities = 18/55 (32%), Positives = 27/55 (49%) Frame = +1 Query: 148 ALSCDLPTRDVTAQIVYATIAGDIVMAAAYSHELPRYGLDVGLTNYAAAYCTGLL 312 AL + RD A + +IAG + Y + + RYG+D + AAA GL+ Sbjct: 79 ALRGGVRVRDTLAAVEAISIAGGRAVVMTYWNPVLRYGVDAFARDLAAAGGLGLI 133
>OVO_DROME (P51521) Protein ovo (Protein shaven baby)| Length = 1351 Score = 28.9 bits (63), Expect = 6.7 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Frame = -2 Query: 403 QAQQRSPHQWPQHCLHTP-HPDHGT*AHDEPKADQCSRLQHSW*VQRQDHSEATHGSRQQ 227 Q QQ+S HQ Q H + H A + + Q QH Q+Q H H +QQ Sbjct: 919 QQQQQSHHQQQQQQQHAAAYQQHNIYAQQQQQQQQ----QHHQQQQQQQHHHFHHQQQQQ 974 Query: 226 P 224 P Sbjct: 975 P 975
>HSP42_YEAST (Q12329) Heat shock protein 42 (42 kDa heat shock protein)| Length = 375 Score = 28.5 bits (62), Expect = 8.7 Identities = 20/76 (26%), Positives = 30/76 (39%) Frame = -2 Query: 439 HPRAHGKASSHQQAQQRSPHQWPQHCLHTPHPDHGT*AHDEPKADQCSRLQHSW*VQRQD 260 HPR H S + +Q+P + P++G D + DQ + RQ+ Sbjct: 52 HPRHHPLYSRYNGVPNTYYYQFPGQAYYYS-PEYGYDDEDGEEEDQDEDMVGDSGTTRQE 110 Query: 259 HSEATHGSRQQPSRYH 212 SR+ PS YH Sbjct: 111 DGGEDSNSRRYPSYYH 126
>VA31_VARV (P33848) Protein A31| Length = 140 Score = 28.5 bits (62), Expect = 8.7 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 6/58 (10%) Frame = -3 Query: 330 EHTTSQKQTSAVGCS------IVGESNVKTIARQLMGVGSSHHDITSNGSINNLGSDI 175 +H+T K S GC ++G+ + + L + S+H +TS+G I LGS I Sbjct: 43 KHSTVVKYLSG-GCIYHDDLVVLGKVTINDLKMMLFYMDLSYHGVTSSGVIYKLGSSI 99
>FILA_HUMAN (P20930) Filaggrin| Length = 4061 Score = 28.5 bits (62), Expect = 8.7 Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 3/80 (3%) Frame = -2 Query: 439 HP---RAHGKASSHQQAQQRSPHQWPQHCLHTPHPDHGT*AHDEPKADQCSRLQHSW*VQ 269 HP R + S H+Q+ RS H H HT +H + SR Q Sbjct: 1492 HPGSSRGGRQGSYHEQSVDRSGHSGYHHS-HTTPQGRSDASHGQSGPRSASR-------Q 1543 Query: 268 RQDHSEATHGSRQQPSRYHQ 209 ++ ++ GSR SR+H+ Sbjct: 1544 TRNEEQSGDGSRHSGSRHHE 1563
>VA31_VACCC (P21096) Protein A31| Length = 124 Score = 28.5 bits (62), Expect = 8.7 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 5/57 (8%) Frame = -3 Query: 330 EHTTSQKQTSAVGCS-----IVGESNVKTIARQLMGVGSSHHDITSNGSINNLGSDI 175 +H+T K S G ++G+ + + L + S+H +TS+G I LGS I Sbjct: 43 KHSTVVKYLSGGGIYHDDLVVLGKVTINDLKMMLFYMDLSYHGVTSSGVIYKLGSSI 99
>YH17_YEAST (P38898) Hypothetical 17.1 kDa protein in PUR5 3'region| Length = 153 Score = 28.5 bits (62), Expect = 8.7 Identities = 12/32 (37%), Positives = 14/32 (43%) Frame = -2 Query: 439 HPRAHGKASSHQQAQQRSPHQWPQHCLHTPHP 344 HP H +H +PH P HTPHP Sbjct: 27 HPHPHTPTHTHPHTPTPTPHPHP----HTPHP 54 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.134 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,488,471 Number of Sequences: 219361 Number of extensions: 1343813 Number of successful extensions: 4673 Number of sequences better than 10.0: 69 Number of HSP's better than 10.0 without gapping: 4343 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4636 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2968155324 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
