ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags31h24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PARG_RAT (Q9QYM2) Poly(ADP-ribose) glycohydrolase (EC 3.2.1.143) 30 8.8

>PARG_RAT (Q9QYM2) Poly(ADP-ribose) glycohydrolase (EC 3.2.1.143)|
          Length = 972

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +2

Query: 65  EHCAIKMKELEKQ--KKADKXVPAQERWEGWCGGAKLEGRSEVPKCGQPVPYMRP 223
           E C ++ +  E++  K     +P  ++W G      +E   ++P+CG  +P +RP
Sbjct: 422 EQCEVRHQRAERKIPKYVPPNLPPDKKWLG----TPIEEMRKMPRCGVRLPLLRP 472


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,025,105
Number of Sequences: 219361
Number of extensions: 1878315
Number of successful extensions: 5092
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 4902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5089
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6655306086
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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