>dbj|AK073180.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033000O24, full
           insert sequence
          Length = 1482

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 45/48 (93%), Gaps = 1/48 (2%)
 Strand = Plus / Plus

                                                           
Query: 121 aagtataatgagggatcacaatcttttgggggattttgcttatgaact 168
           ||||||||||||| |||| |||||||||||||||||||| ||||||||
Sbjct: 775 aagtataatgagg-atcataatcttttgggggattttgcgtatgaact 821

>ref|XM_550611.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 936

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                              
Query: 134 gatcacaatcttttgggggattttgcttatgaact 168
           ||||| |||||||||||||||||||||||||||||
Sbjct: 484 gatcataatcttttgggggattttgcttatgaact 518

>ref|XM_483139.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1320

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 37/39 (94%), Gaps = 1/39 (2%)
 Strand = Plus / Plus

                                                  
Query: 118 gacaagtataatgagggatcacaatcttttgggggattt 156
           |||||||||||||| | ||||||||||||||||||||||
Sbjct: 148 gacaagtataatgatg-atcacaatcttttgggggattt 185



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 213 tggtactatcatctcaatttcac 235
           |||||||||||||||||||||||
Sbjct: 241 tggtactatcatctcaatttcac 263

>ref|XM_483137.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 651

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 36/38 (94%), Gaps = 1/38 (2%)
 Strand = Plus / Plus

                                                 
Query: 117 ggacaagtataatgagggatcacaatcttttgggggat 154
           ||||||||||||||||| ||||||||||||| ||||||
Sbjct: 120 ggacaagtataatgagg-atcacaatctttttggggat 156



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 214 ggtactatcatctcaatttcac 235
           ||||||||||||||||||||||
Sbjct: 215 ggtactatcatctcaatttcac 236



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 431 tggtggtcacttggatgttggtatgccatttg 462
           |||||||||||||||| | |||| ||||||||
Sbjct: 483 tggtggtcacttggatatgggtaggccatttg 514

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 34/36 (94%), Gaps = 1/36 (2%)
 Strand = Plus / Plus

                                                    
Query: 117      ggacaagtataatgagggatcacaatcttttggggg 152
                ||||||||||||||| ||||||||||||||| ||||
Sbjct: 24442698 ggacaagtataatga-ggatcacaatctttttgggg 24442732



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                        
Query: 212      gtggtactatcatctcaatttcac 235
                ||||||||||||||||||||||||
Sbjct: 24403811 gtggtactatcatctcaatttcac 24403834



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 34/36 (94%), Gaps = 1/36 (2%)
 Strand = Plus / Plus

                                                    
Query: 117      ggacaagtataatgagggatcacaatcttttggggg 152
                ||||||||||||||| | ||||||||||||||||||
Sbjct: 24403447 ggacaagtataatgatg-atcacaatcttttggggg 24403481



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 213      tggtactatcatctcaatttcac 235
                |||||||||||||||||||||||
Sbjct: 24448477 tggtactatcatctcaatttcac 24448499



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 33/35 (94%), Gaps = 1/35 (2%)
 Strand = Plus / Plus

                                                   
Query: 118      gacaagtataatgagggatcacaatcttttggggg 152
                |||||||||||||| | ||||||||||||||||||
Sbjct: 24448276 gacaagtataatgatg-atcacaatcttttggggg 24448309



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                       
Query: 323      ggtcagctgcttctgcatgattaatcctacagataatgg 361
                ||||||||| |||||| ||||||||||||  ||||||||
Sbjct: 24403934 ggtcagctgtttctgcgtgattaatcctattgataatgg 24403972



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 214      ggtactatcatctcaatttcac 235
                ||||||||||||||||||||||
Sbjct: 24442890 ggtactatcatctcaatttcac 24442911



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 431      tggtggtcacttggatgttggtatgccatttg 462
                |||||||||||||||| | |||| ||||||||
Sbjct: 24443565 tggtggtcacttggatatgggtaggccatttg 24443596

>dbj|AP005148.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1142B04
          Length = 161964

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 34/36 (94%), Gaps = 1/36 (2%)
 Strand = Plus / Plus

                                                 
Query: 117   ggacaagtataatgagggatcacaatcttttggggg 152
             ||||||||||||||| ||||||||||||||| ||||
Sbjct: 58414 ggacaagtataatga-ggatcacaatctttttgggg 58448



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 212   gtggtactatcatctcaatttcac 235
             ||||||||||||||||||||||||
Sbjct: 19527 gtggtactatcatctcaatttcac 19550



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 34/36 (94%), Gaps = 1/36 (2%)
 Strand = Plus / Plus

                                                 
Query: 117   ggacaagtataatgagggatcacaatcttttggggg 152
             ||||||||||||||| | ||||||||||||||||||
Sbjct: 19163 ggacaagtataatgatg-atcacaatcttttggggg 19197



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 213   tggtactatcatctcaatttcac 235
             |||||||||||||||||||||||
Sbjct: 64193 tggtactatcatctcaatttcac 64215



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 33/35 (94%), Gaps = 1/35 (2%)
 Strand = Plus / Plus

                                                
Query: 118   gacaagtataatgagggatcacaatcttttggggg 152
             |||||||||||||| | ||||||||||||||||||
Sbjct: 63992 gacaagtataatgatg-atcacaatcttttggggg 64025



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                    
Query: 323   ggtcagctgcttctgcatgattaatcctacagataatgg 361
             ||||||||| |||||| ||||||||||||  ||||||||
Sbjct: 19650 ggtcagctgtttctgcgtgattaatcctattgataatgg 19688



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 214   ggtactatcatctcaatttcac 235
             ||||||||||||||||||||||
Sbjct: 58606 ggtactatcatctcaatttcac 58627



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 431   tggtggtcacttggatgttggtatgccatttg 462
             |||||||||||||||| | |||| ||||||||
Sbjct: 59281 tggtggtcacttggatatgggtaggccatttg 59312

>dbj|AK065332.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000K10, full
            insert sequence
          Length = 1792

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 212  gtggtactatcatctcaatttcac 235
            ||||||||||||||||||||||||
Sbjct: 1072 gtggtactatcatctcaatttcac 1095



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 34/36 (94%), Gaps = 1/36 (2%)
 Strand = Plus / Plus

                                               
Query: 117 ggacaagtataatgagggatcacaatcttttggggg 152
           ||||||||||||||| | ||||||||||||||||||
Sbjct: 708 ggacaagtataatgatg-atcacaatcttttggggg 742



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                   
Query: 323  ggtcagctgcttctgcatgattaatcctacagataatgg 361
            ||||||||| |||||| ||||||||||||  ||||||||
Sbjct: 1195 ggtcagctgtttctgcgtgattaatcctattgataatgg 1233

>gb|AY192738.1| Presbytis entellus apolipoprotein B (APOB) gene, exon 19 and
           partial cds
          Length = 1217

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 8   aagcagctctttactggcctga 29
           ||||||||||||||||||||||
Sbjct: 661 aagcagctctttactggcctga 682

>gb|AY192732.1| Nasalis larvatus apolipoprotein B (APOB) gene, exon 19 and partial
           cds
          Length = 1195

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 8   aagcagctctttactggcctga 29
           ||||||||||||||||||||||
Sbjct: 644 aagcagctctttactggcctga 665

>dbj|AK063440.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-E11, full
           insert sequence
          Length = 1398

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 137 cacaatcttttgggggattttgcttatgaactcaaagg 174
           ||||||||||||| |||| |||||| ||| ||||||||
Sbjct: 862 cacaatcttttggaggatcttgcttttgagctcaaagg 899

>ref|XM_415577.1| PREDICTED: Gallus gallus similar to growth arrest-specific 7-cb
           protein (LOC417305), mRNA
          Length = 1257

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 470 ttcagagtggagctactgggattat 494
           |||||||||||||||||| ||||||
Sbjct: 207 ttcagagtggagctactgtgattat 231

>gb|AE009279.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 49 of 187
             of the complete sequence
          Length = 12141

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 321   tcggtcagctgcttctgcatg 341
             |||||||||||||||||||||
Sbjct: 10322 tcggtcagctgcttctgcatg 10342

>gb|AE008333.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 137 of
            187 of the complete sequence
          Length = 10241

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 321  tcggtcagctgcttctgcatg 341
            |||||||||||||||||||||
Sbjct: 2021 tcggtcagctgcttctgcatg 2001

>ref|NM_197153.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0041P03.14), mRNA
          Length = 996

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 425 atacgttggtggtcacttggatgt 448
           ||||| ||||||||||||||||||
Sbjct: 732 atacgctggtggtcacttggatgt 755

>gb|AC116787.10| Mus musculus chromosome 6, clone RP24-296D21, complete sequence
          Length = 189538

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 101   cttcaaggctttggtgggacaagt 124
             ||||||| ||||||||||||||||
Sbjct: 70141 cttcaagcctttggtgggacaagt 70164

>emb|BX927387.9| Zebrafish DNA sequence from clone DKEY-32H20 in linkage group 6, complete
              sequence
          Length = 175517

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 144    ttttgggggattttgcttat 163
              ||||||||||||||||||||
Sbjct: 131505 ttttgggggattttgcttat 131486

>gb|AC068950.11| Oryza sativa chromosome 10 BAC OSJNBa0041P03 genomic sequence, complete
             sequence
          Length = 139614

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 425   atacgttggtggtcacttggatgt 448
             ||||| ||||||||||||||||||
Sbjct: 55368 atacgctggtggtcacttggatgt 55345

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 425      atacgttggtggtcacttggatgt 448
                ||||| ||||||||||||||||||
Sbjct: 18295402 atacgctggtggtcacttggatgt 18295425

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                               
Query: 121     aagtataatgagggatcacaatcttttggggg 152
               ||||||||||||| |||| |||||||||||||
Sbjct: 1914570 aagtataatgagg-atcataatcttttggggg 1914540

>dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0548D03
          Length = 156709

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                             
Query: 121   aagtataatgagggatcacaatcttttggggg 152
             ||||||||||||| |||| |||||||||||||
Sbjct: 43350 aagtataatgagg-atcataatcttttggggg 43320

>dbj|AP004234.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0001H02
          Length = 147160

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                              
Query: 121    aagtataatgagggatcacaatcttttggggg 152
              ||||||||||||| |||| |||||||||||||
Sbjct: 115048 aagtataatgagg-atcataatcttttggggg 115018

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 425      atacgttggtggtcacttggatgt 448
                ||||| ||||||||||||||||||
Sbjct: 18305055 atacgctggtggtcacttggatgt 18305078

>gb|U91645.1|ACU91645 Agropyron cristatum strain Hycrest, primer OPE18 RAPD marker
          Length = 393

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 215 gtactatcatctcaatttcacgatgact 242
           ||||||||||||||||| | ||||||||
Sbjct: 189 gtactatcatctcaattccccgatgact 216


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,887,071
Number of Sequences: 3902068
Number of extensions: 3887071
Number of successful extensions: 68669
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 68521
Number of HSP's gapped (non-prelim): 145
length of query: 511
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 488
effective length of database: 17,143,297,704
effective search space: 8365929279552
effective search space used: 8365929279552
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)