| Clone Name | bags31f17 |
|---|---|
| Clone Library Name | barley_pub |
>PLAP_MOUSE (P27612) Phospholipase A-2-activating protein (PLAP)| Length = 646 Score = 30.0 bits (66), Expect = 1.4 Identities = 18/52 (34%), Positives = 26/52 (50%) Frame = +2 Query: 161 FLPHLLFLLGPTFAWSCDL*SLRLFCNCRI*QSI*AFLXKGRRPILSGKIHL 316 F HL+ LL P + L +LR FCNC + Q+ + R ++S I L Sbjct: 581 FSSHLINLLNPKGKPANQLLALRTFCNCFVSQAGQKLMMSQRESLMSHAIEL 632
>PLAP_RAT (P54319) Phospholipase A-2-activating protein (PLAP)| Length = 647 Score = 30.0 bits (66), Expect = 1.4 Identities = 18/52 (34%), Positives = 26/52 (50%) Frame = +2 Query: 161 FLPHLLFLLGPTFAWSCDL*SLRLFCNCRI*QSI*AFLXKGRRPILSGKIHL 316 F HL+ LL P + L +LR FCNC + Q+ + R ++S I L Sbjct: 582 FSSHLINLLNPKGKPANQLLALRTFCNCFVSQAGQKLMMSQRESLMSHAIEL 633
>PLAP_HUMAN (Q9Y263) Phospholipase A-2-activating protein (PLAP) (PLA2P)| Length = 738 Score = 30.0 bits (66), Expect = 1.4 Identities = 18/52 (34%), Positives = 26/52 (50%) Frame = +2 Query: 161 FLPHLLFLLGPTFAWSCDL*SLRLFCNCRI*QSI*AFLXKGRRPILSGKIHL 316 F HL+ LL P + L +LR FCNC + Q+ + R ++S I L Sbjct: 582 FSSHLINLLNPKGKPANQLLALRTFCNCFVGQAGQKLMMSQRESLMSHAIEL 633
>MTBS_BPSPR (P00476) Modification methylase SPRI (EC 2.1.1.37)| (Cytosine-specific methyltransferase SPRI) (M.SPRI) Length = 439 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/52 (32%), Positives = 29/52 (55%) Frame = -1 Query: 391 FTFKWPIRTATELXIKAQLE*YXPTQVYFPT*DRSSSLXQEGSNTLLNSAVT 236 F F+W ++A +K LE Y + Y+ D+++SL +E S + LN +T Sbjct: 203 FNFRWTAQSAATKRLKDLLEEYV-DEKYYLNEDKTNSLIKELSTSRLNENLT 253
>TPS2_MOUSE (O88856) Protein-tyrosine sulfotransferase 2 (EC 2.8.2.20)| (Tyrosylprotein sulfotransferase-2) (TPST-2) Length = 376 Score = 28.9 bits (63), Expect = 3.1 Identities = 22/57 (38%), Positives = 31/57 (54%) Frame = +1 Query: 40 LLSCPVGLTFHFLSEVQREVRILIRAVRTRALSKWFPTGSIPTTFVVSSWANICMVL 210 L+ P G++ LS+++R +I+ V ALSKW TG IP VV A I +L Sbjct: 269 LIGKPGGVS---LSKIERSTDQVIKPVNLEALSKW--TGHIPRD-VVRDMAQIAPML 319
>HCN3_HUMAN (Q9P1Z3) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 3 Length = 774 Score = 28.5 bits (62), Expect = 4.1 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 3/61 (4%) Frame = +1 Query: 4 WAQVHVSLAPLFLLSCPVGLTFHFLSEVQREVRILIRAVRTRALSKWFPT---GSIPTTF 174 W +V FLL + + E E+ + RA+RTR L WF SIP + Sbjct: 126 WIVFNVLSDTFFLLDLVLNFRTGIVVEEGAEILLAPRAIRTRYLRTWFLVDLISSIPVDY 185 Query: 175 V 177 + Sbjct: 186 I 186
>HCN3_RAT (Q9JKA8) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 3 Length = 780 Score = 28.5 bits (62), Expect = 4.1 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 3/61 (4%) Frame = +1 Query: 4 WAQVHVSLAPLFLLSCPVGLTFHFLSEVQREVRILIRAVRTRALSKWFPT---GSIPTTF 174 W +V FLL + + E E+ + RA+RTR L WF SIP + Sbjct: 125 WIVFNVLSDTFFLLDLVLNFRTGIVVEEGAEILLAPRAIRTRYLRTWFLVDLISSIPVDY 184 Query: 175 V 177 + Sbjct: 185 I 185
>TPS2_HUMAN (O60704) Protein-tyrosine sulfotransferase 2 (EC 2.8.2.20)| (Tyrosylprotein sulfotransferase-2) (TPST-2) Length = 377 Score = 28.5 bits (62), Expect = 4.1 Identities = 22/57 (38%), Positives = 31/57 (54%) Frame = +1 Query: 40 LLSCPVGLTFHFLSEVQREVRILIRAVRTRALSKWFPTGSIPTTFVVSSWANICMVL 210 L+ P G++ LS+++R +I+ V ALSKW TG IP VV A I +L Sbjct: 270 LIGKPGGVS---LSKIERSTDQVIKPVNLEALSKW--TGHIPGD-VVRDMAQIAPML 320
>HCN3_MOUSE (O88705) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 3 (Hyperpolarization-activated cation channel 3) (HAC-3) Length = 779 Score = 28.5 bits (62), Expect = 4.1 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 3/61 (4%) Frame = +1 Query: 4 WAQVHVSLAPLFLLSCPVGLTFHFLSEVQREVRILIRAVRTRALSKWFPT---GSIPTTF 174 W +V FLL + + E E+ + RA+RTR L WF SIP + Sbjct: 125 WIVFNVLSDTFFLLDLVLNFRTGIVVEEGAEILLAPRAIRTRYLRTWFLVDLISSIPVDY 184 Query: 175 V 177 + Sbjct: 185 I 185
>MINC_PASMU (P57845) Probable septum site-determining protein minC| Length = 225 Score = 28.5 bits (62), Expect = 4.1 Identities = 17/92 (18%), Positives = 44/92 (47%) Frame = -3 Query: 374 HQNSYRTXHQSSTRIVSXNTSVFSHLR*VVVPSTRRLKYFAKFCSYRITSMIIGRKTMQM 195 H +S ++ ++ + + S+F H+ V++ T L+ + + ++ Sbjct: 21 HSSSLSVIKRALSKKIKSSPSIFQHIA-VILQFTPELEK-------------VNLQALKS 66 Query: 194 LAQEETTNVVGMLPVGNHLERALVRTALIRIL 99 L +E +++G+ NHL++ L+ T+ + +L Sbjct: 67 LCEEFNIHIIGVSDWTNHLQKELIMTSGLALL 98
>RM35_HUMAN (Q9NZE8) 39S ribosomal protein L35, mitochondrial precursor (L35mt)| (MRP-L35) Length = 170 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/53 (32%), Positives = 31/53 (58%) Frame = -3 Query: 368 NSYRTXHQSSTRIVSXNTSVFSHLR*VVVPSTRRLKYFAKFCSYRITSMIIGR 210 ++YR ++++ I + +T FSH++ VV ST RL + + TS+I+ R Sbjct: 26 STYRNCVKNASLISALSTGRFSHIQTPVVSSTPRLTTSERNLTCGHTSVILNR 78
>CBL10_ARATH (Q9LJU0) COBRA-like protein 10 precursor| Length = 672 Score = 27.7 bits (60), Expect = 6.9 Identities = 8/23 (34%), Positives = 15/23 (65%) Frame = +1 Query: 148 PTGSIPTTFVVSSWANICMVLRP 216 P+G + T+ +SSW +C + +P Sbjct: 404 PSGLLAVTYAISSWQVVCNITKP 426
>DMRT1_MOUSE (Q9QZ59) Doublesex- and mab-3-related transcription factor 1| Length = 374 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/48 (33%), Positives = 24/48 (50%) Frame = +3 Query: 150 YREHSYHICCFFLGQHLHGLATYNH*GYSVTAEFSKVFEPSCXRDDDL 293 YR HSY+ +LGQ + + T+ G S + + VF P +D L Sbjct: 286 YRMHSYYGPPSYLGQSMSQIFTFEE-GPSYSEAKASVFSPPSSQDSGL 332
>YKJ2_CAEEL (P34276) Hypothetical protein C02D5.2| Length = 323 Score = 27.3 bits (59), Expect = 9.0 Identities = 11/36 (30%), Positives = 20/36 (55%) Frame = +1 Query: 214 PIIIEVIL*LQNLAKYLSLLVEGTTTYLKWENTLVL 321 P+I IL +L + L+ G ++Y+ W T++L Sbjct: 12 PLICRPILTFSSLHILTAFLISGNSSYINWSVTIIL 47 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,396,853 Number of Sequences: 219361 Number of extensions: 953044 Number of successful extensions: 2021 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 1977 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2021 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 1375720320 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)