| Clone Name | bags31f17 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC119832.9| Mus musculus chromosome 3, clone RP23-471I16, complete sequence Length = 178681 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 56 ttggtcttacatttcatttttt 77 |||||||||||||||||||||| Sbjct: 59555 ttggtcttacatttcatttttt 59534
>gb|AC140199.2| Mus musculus BAC clone RP23-480D7 from chromosome 9, complete sequence Length = 170896 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 ttggtcttacatttcattttttgt 79 ||||||||||||||||||| |||| Sbjct: 85855 ttggtcttacatttcatttgttgt 85878
>gb|AC149876.2| Xenopus tropicalis clone CH216-166O21, complete sequence Length = 185995 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 tagttctgtagctgttctga 372 |||||||||||||||||||| Sbjct: 106101 tagttctgtagctgttctga 106082
>gb|AC133653.4| Mus musculus BAC clone RP24-320J12 from chromosome 7, complete sequence Length = 144233 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 catttgttgtttcttcttgg 189 |||||||||||||||||||| Sbjct: 66224 catttgttgtttcttcttgg 66205
>emb|AL121754.18|HSDJ629F1 Human DNA sequence from clone RP4-629F1 on chromosome 20 Contains the 5' end of the C20orf13 gene for chromsome 20 open reading frame 13 and a CpG island, complete sequence Length = 170509 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ctgcagaatttagcaaagta 260 |||||||||||||||||||| Sbjct: 26296 ctgcagaatttagcaaagta 26277
>gb|AC158781.4| Mus musculus chromosome 7, clone RP23-264H19, complete sequence Length = 208419 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 catttgttgtttcttcttgg 189 |||||||||||||||||||| Sbjct: 109014 catttgttgtttcttcttgg 108995
>gb|AC015933.9| Homo sapiens chromosome 18, clone CTD-2023G8, complete sequence Length = 249021 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 ttacatttcattttttgtct 81 |||||||||||||||||||| Sbjct: 127622 ttacatttcattttttgtct 127603
>emb|BX571730.9| Zebrafish DNA sequence from clone DKEY-35I22 in linkage group 5, complete sequence Length = 160875 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 ttggtcttacatttcattttttgt 79 ||||||||||| |||||||||||| Sbjct: 135428 ttggtcttacacttcattttttgt 135451
>emb|AL845349.13| Mouse DNA sequence from clone RP23-311F6 on chromosome 2, complete sequence Length = 180824 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 tttgttgtttcttcttgggc 191 |||||||||||||||||||| Sbjct: 61235 tttgttgtttcttcttgggc 61254
>emb|AJ437104.1|GSP437104 Glomus arbuscular mycorrhizal symbiont of Voyriella parviflora 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial) and ITS1 and 2, clone 57-2, Voyriella parviflora sample M Length = 486 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 202 atggtcttgcgacctataatcatt 225 |||||||| ||||||||||||||| Sbjct: 449 atggtcttacgacctataatcatt 472
>emb|CR762277.2| Xenopus tropicalis finished cDNA, clone TGas038a06 Length = 1763 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 aactgcagaatttagcaaag 258 |||||||||||||||||||| Sbjct: 904 aactgcagaatttagcaaag 923
>gb|AC166329.3| Pan troglodytes BAC clone CH251-143I6 from chromosome unknown, complete sequence Length = 173896 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 ttacatttcattttttgtct 81 |||||||||||||||||||| Sbjct: 53631 ttacatttcattttttgtct 53612 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,852,900 Number of Sequences: 3902068 Number of extensions: 3852900 Number of successful extensions: 72744 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 72722 Number of HSP's gapped (non-prelim): 22 length of query: 394 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 372 effective length of database: 17,147,199,772 effective search space: 6378758315184 effective search space used: 6378758315184 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)