>EMF2_ARATH (Q8L6Y4) Polycomb protein EMBRYONIC FLOWER 2|
          Length = 631

 Score = 92.8 bits (229), Expect(2) = 8e-22
 Identities = 43/79 (54%), Positives = 61/79 (77%)
 Frame = +2

Query: 65  QXDELTAKESLALYCKPVELYNLIRQRAIKKPPSLQRCLRYKIDAKRKKRIQISVSISRS 244
           + +E+ A+ESLA YCKPVELYN+I++RAI+ P  LQRCL YKI+AK K+RIQ++V +S +
Sbjct: 32  EEEEIAAEESLAAYCKPVELYNIIQRRAIRNPLFLQRCLHYKIEAKHKRRIQMTVFLSGA 91

Query: 245 THTQLPAHGIFPLHVLLAR 301
               +    +FPL++LLAR
Sbjct: 92  IDAGVQTQKLFPLYILLAR 110



 Score = 29.3 bits (64), Expect(2) = 8e-22
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +3

Query: 303 LVRDVPGEGHSPMYRFSRAFVLTSFRESGDSDHTEATFTVPNM 431
           LV   P   +S +YRFSRA +LT           +A F +P+M
Sbjct: 111 LVSPKPVAEYSAVYRFSRACILTGGLGVDGVSQAQANFLLPDM 153

>VRN2_ARATH (Q8W5B1) Polycomb group protein VERNALIZATION 2|
          Length = 440

 Score = 55.1 bits (131), Expect = 8e-08
 Identities = 23/46 (50%), Positives = 32/46 (69%)
 Frame = +2

Query: 77  LTAKESLALYCKPVELYNLIRQRAIKKPPSLQRCLRYKIDAKRKKR 214
           ++  E+L +YCKPV LYN+   R++  P  L RCL YKI AKRK++
Sbjct: 16  ISTDENLLIYCKPVRLYNIFHLRSLGNPSFLPRCLNYKIGAKRKRK 61

>GALT8_HUMAN (Q9NY28) Probable polypeptide N-acetylgalactosaminyltransferase 8|
           (EC 2.4.1.41) (Protein-UDP
           acetylgalactosaminyltransferase 8)
           (UDP-GalNAc:polypeptide
           N-acetylgalactosaminyltransferase 8) (Polypeptide GalNAc
           transferase 8) (GalNAc-T8) (pp-Ga
          Length = 637

 Score = 33.5 bits (75), Expect = 0.24
 Identities = 19/72 (26%), Positives = 36/72 (50%)
 Frame = +2

Query: 14  VHXNXTCGQXVKXLSYLQXDELTAKESLALYCKPVELYNLIRQRAIKKPPSLQRCLRYKI 193
           +H N   G  +K LS+L+ +    KES+ L  +  E  N   +RA  +   L + +  K+
Sbjct: 47  LHLNKRYGAVIKRLSHLEVELQDLKESMKLALRQQENVNSTLKRAKDEVRPLLKAMETKV 106

Query: 194 DAKRKKRIQISV 229
           +  +K + Q+ +
Sbjct: 107 NETKKHKTQMKL 118

>YEX0_YEAST (P40085) Hypothetical 64.8 kDa protein in GDI1-COX15 intergenic|
           region
          Length = 556

 Score = 32.7 bits (73), Expect = 0.40
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +2

Query: 86  KESLALYCKPVELYNLIRQRAIKKPPSLQRCLRYKIDAKR 205
           K +L   C P  L ++ RQ+  K P SL+   RYK+ +KR
Sbjct: 515 KTTLTAECTPPSLNDIRRQKDSKNPRSLENVARYKMVSKR 554

>FBX16_MOUSE (Q9QZM9) F-box only protein 16|
          Length = 334

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
 Frame = +2

Query: 107 CKPVELYNLIRQRAIKKPPSLQRCLRYKI----DAKRKKRIQISVSISRSTHTQLPAHGI 274
           C P EL+ L R++  +  P  +R LR K     D  R ++ Q  +S+S  +  ++P    
Sbjct: 238 CDP-ELFRLGRRKRSEVTPDFKRQLRDKKNKLQDRARLRKAQSLISLS--SPPKVPVRLA 294

Query: 275 FPLHVLLARSSKGCSR*RAFSNVSVQPG 358
           +PLH+ +A S +  +      ++   PG
Sbjct: 295 WPLHLPVAPSDREAATEALLEHLQKHPG 322

>PATL5_ARATH (Q9M0R2) Patellin-5|
          Length = 668

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 13/48 (27%), Positives = 26/48 (54%)
 Frame = +3

Query: 198 QNEKRGFRYQYQFLEAHILNCQHMVSFLSMFC*LDLVRDVPGEGHSPM 341
           +  +R  R++ QFLE  I N   +   +S  C ++ +++ PG G + +
Sbjct: 422 EKRERFLRWRIQFLEKSIRNLDFVAGGVSTICQVNDLKNSPGPGKTEL 469

>SYV_BLOPB (Q493Z9) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 957

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +1

Query: 202 TKKEDSDISINFSKHTYSIASTWYLS 279
           TK +D  ISIN ++ ++S+A  W ++
Sbjct: 660 TKNQDCGISININEKSFSLADRWIIT 685


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,100,913
Number of Sequences: 219361
Number of extensions: 1135382
Number of successful extensions: 2733
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2733
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2570413340
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)