ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags31e15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK066017.1| Oryza sativa (japonica cultivar-group) cDNA clon... 236 6e-59
2dbj|AK071393.1| Oryza sativa (japonica cultivar-group) cDNA clon... 206 5e-50
3gb|AC108224.6| Oryza sativa (japonica cultivar-group) chromosome... 92 2e-15
4gb|AC108223.5| Oryza sativa (japonica cultivar-group) chromosome... 92 2e-15
5dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
6dbj|AK107059.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 2e-15
7gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 92 2e-15
8gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence 42 1.8
9ref|XM_721492.1| Plasmodium yoelii yoelii str. 17XNL mature-para... 42 1.8
10ref|XM_794096.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 1.8
11ref|NM_135967.1| Drosophila melanogaster CG13272-RA (CG13272), mRNA 42 1.8
12dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
13gb|AC009250.3|AC009250 Drosophila melanogaster, chromosome 2L, r... 42 1.8
14gb|AE009672.1| Brucella melitensis 16M chromosome II, section 34... 42 1.8
15dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
16gb|AE017224.1| Brucella abortus biovar 1 str. 9-941 chromosome I... 42 1.8
17dbj|AK109842.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
18gb|BT021271.1| Drosophila melanogaster RE46655 full insert cDNA 42 1.8
19gb|AE003652.2| Drosophila melanogaster chromosome 2L, section 61... 42 1.8
20emb|AM040265.1| Brucella melitensis biovar Abortus chromosome II... 42 1.8
21ref|XM_631324.1| Dictyostelium discoideum hypothetical protein (... 40 7.3
22gb|AC024824.1| Caenorhabditis elegans cosmid Y55B1BR, complete s... 40 7.3
23gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 7.3
24gb|AF438230.1| Dirofilaria immitis nuclear receptor RXR (RXR) ge... 40 7.3
25gb|AF438229.1| Dirofilaria immitis nuclear receptor RXR (RXR) mR... 40 7.3
26ref|XM_760911.1| Theileria parva strain Muguga chromosome 1 hypo... 40 7.3
27emb|AL354739.15| Human DNA sequence from clone RP11-379K8 on chr... 40 7.3
28emb|AL353052.4| Human DNA sequence from clone RP5-865N13 on chro... 40 7.3
29dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, compl... 40 7.3
30gb|AF097739.2| Rhodospirillum rubrum ADP-glucose pyrophosphoryla... 40 7.3
31gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 7.3
32ref|NM_064797.2| Caenorhabditis elegans Y55B1BR.3 (Y55B1BR.3) mR... 40 7.3
33dbj|AB210810.1| Ciona intestinalis mRNA for zinc finger protein,... 40 7.3
34gb|AC011093.6|AC011093 Homo sapiens, clone RP11-1L24, complete s... 40 7.3
35gb|AE015924.1| Porphyromonas gingivalis W83, complete genome 40 7.3
36emb|X76126.1|TTTAP1PA T.thermophila TAP1 gene polyA signal with ... 40 7.3
37emb|X76125.1|TTTAP1IN T.thermophila TAP1 gene 40 7.3 
>dbj|AK066017.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050C10, full
           insert sequence
          Length = 2235

 Score =  236 bits (119), Expect = 6e-59
 Identities = 240/278 (86%), Gaps = 2/278 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cgacggcgagcccgcgcgcctcaccgnacgccgaatccgcccggncaatcgtggaggtca 60
           ||||||||||||||| | |||||||| ||||||| ||||| ||  | ||||| ||||| |
Sbjct: 404 cgacggcgagcccgcccacctcaccg-acgccgagtccgcacgaaccatcgtcgaggtga 462

                                                                       
Query: 61  acaacaatgcaacggtgatgatctccacgctcatcgatgacggcgtgcacgagnaggatc 120
           ||| ||| || |||||||||||||| ||||| ||||| || |||||||||||| ||||||
Sbjct: 463 acagcaaggcgacggtgatgatctcgacgctgatcgacgagggcgtgcacgag-aggatc 521

                                                                       
Query: 121 atcctgcccgagttcccctacttgaccgacgagaatggagatatttacttcgaggtcgac 180
           |||||||| |||||||||||| | ||||| ||||| ||||||||||||||||||||||||
Sbjct: 522 atcctgccggagttcccctacctcaccgatgagaacggagatatttacttcgaggtcgac 581

                                                                       
Query: 181 aacgacgacgcggtcatggaaaacattatgggagacgacaagattgcgcatgttattatt 240
           |||||||||||  || |||| | ||| |||||||||||||||| |||||||||||| || 
Sbjct: 582 aacgacgacgccctcctggagagcatcatgggagacgacaagactgcgcatgttatcata 641

                                                 
Query: 241 ggactcgataacacagatgtctttgctgacttggatct 278
           || || || |||||  | ||||||||||||||||||||
Sbjct: 642 gggcttgacaacactcaggtctttgctgacttggatct 679
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>dbj|AK071393.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023096A11, full
           insert sequence
          Length = 1612

 Score =  206 bits (104), Expect = 5e-50
 Identities = 195/224 (87%), Gaps = 1/224 (0%)
 Strand = Plus / Plus

                                                                       
Query: 55  aggtcaacaacaatgcaacggtgatgatctccacgctcatcgatgacggcgtgcacgagn 114
           |||| |||| ||| || |||||||||||||| ||||| ||||| || |||||||||||| 
Sbjct: 478 aggtgaacagcaaggcgacggtgatgatctcgacgctgatcgacgagggcgtgcacgag- 536

                                                                       
Query: 115 aggatcatcctgcccgagttcccctacttgaccgacgagaatggagatatttacttcgag 174
           |||||||||||||| |||||||||||| | ||||| ||||| ||||||||||||||||||
Sbjct: 537 aggatcatcctgccggagttcccctacctcaccgatgagaacggagatatttacttcgag 596

                                                                       
Query: 175 gtcgacaacgacgacgcggtcatggaaaacattatgggagacgacaagattgcgcatgtt 234
           |||||||||||||||||  || |||| | ||| |||||||||||||||| ||||||||||
Sbjct: 597 gtcgacaacgacgacgccctcctggagagcatcatgggagacgacaagactgcgcatgtt 656

                                                       
Query: 235 attattggactcgataacacagatgtctttgctgacttggatct 278
           || || || || || |||||  | ||||||||||||||||||||
Sbjct: 657 atcatagggcttgacaacactcaggtctttgctgacttggatct 700



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 36/40 (90%), Gaps = 1/40 (2%)
 Strand = Plus / Plus

                                                   
Query: 1   cgacggcgagcccgcgcgcctcaccgnacgccgaatccgc 40
           ||||||||||||||| | |||||||| ||||||| |||||
Sbjct: 410 cgacggcgagcccgcccacctcaccg-acgccgagtccgc 448
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>gb|AC108224.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone
           OSJNBa0038F07, complete sequence
          Length = 175703

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 92/106 (86%), Gaps = 1/106 (0%)
 Strand = Plus / Plus

                                                                       
Query: 55  aggtcaacaacaatgcaacggtgatgatctccacgctcatcgatgacggcgtgcacgagn 114
           |||| |||| ||| || |||||||||||||| ||||| ||||| || |||||||||||| 
Sbjct: 812 aggtgaacagcaaggcgacggtgatgatctcgacgctgatcgacgagggcgtgcacgag- 870

                                                         
Query: 115 aggatcatcctgcccgagttcccctacttgaccgacgagaatggag 160
           |||||||||||||| |||||||||||| | ||||| ||||| ||||
Sbjct: 871 aggatcatcctgccggagttcccctacctcaccgatgagaacggag 916



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 63/70 (90%)
 Strand = Plus / Plus

                                                                        
Query: 159  agatatttacttcgaggtcgacaacgacgacgcggtcatggaaaacattatgggagacga 218
            |||||||||||||||||||||||||||||||||  || |||| | ||| |||||||||||
Sbjct: 1063 agatatttacttcgaggtcgacaacgacgacgccctcctggagagcatcatgggagacga 1122

                      
Query: 219  caagattgcg 228
            ||||| ||||
Sbjct: 1123 caagactgcg 1132



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 259  gtctttgctgacttggatct 278
            ||||||||||||||||||||
Sbjct: 1268 gtctttgctgacttggatct 1287



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 36/40 (90%), Gaps = 1/40 (2%)
 Strand = Plus / Plus

                                                   
Query: 1   cgacggcgagcccgcgcgcctcaccgnacgccgaatccgc 40
           ||||||||||||||| | |||||||| ||||||| |||||
Sbjct: 540 cgacggcgagcccgcccacctcaccg-acgccgagtccgc 578
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>gb|AC108223.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019A16,
              complete sequence
          Length = 175425

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 92/106 (86%), Gaps = 1/106 (0%)
 Strand = Plus / Plus

                                                                          
Query: 55     aggtcaacaacaatgcaacggtgatgatctccacgctcatcgatgacggcgtgcacgagn 114
              |||| |||| ||| || |||||||||||||| ||||| ||||| || |||||||||||| 
Sbjct: 151049 aggtgaacagcaaggcgacggtgatgatctcgacgctgatcgacgagggcgtgcacgag- 151107

                                                            
Query: 115    aggatcatcctgcccgagttcccctacttgaccgacgagaatggag 160
              |||||||||||||| |||||||||||| | ||||| ||||| ||||
Sbjct: 151108 aggatcatcctgccggagttcccctacctcaccgatgagaacggag 151153



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 63/70 (90%)
 Strand = Plus / Plus

                                                                          
Query: 159    agatatttacttcgaggtcgacaacgacgacgcggtcatggaaaacattatgggagacga 218
              |||||||||||||||||||||||||||||||||  || |||| | ||| |||||||||||
Sbjct: 151300 agatatttacttcgaggtcgacaacgacgacgccctcctggagagcatcatgggagacga 151359

                        
Query: 219    caagattgcg 228
              ||||| ||||
Sbjct: 151360 caagactgcg 151369



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 259    gtctttgctgacttggatct 278
              ||||||||||||||||||||
Sbjct: 151505 gtctttgctgacttggatct 151524



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 36/40 (90%), Gaps = 1/40 (2%)
 Strand = Plus / Plus

                                                      
Query: 1      cgacggcgagcccgcgcgcctcaccgnacgccgaatccgc 40
              ||||||||||||||| | |||||||| ||||||| |||||
Sbjct: 150777 cgacggcgagcccgcccacctcaccg-acgccgagtccgc 150815
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 92/106 (86%), Gaps = 1/106 (0%)
 Strand = Plus / Plus

                                                                            
Query: 55       aggtcaacaacaatgcaacggtgatgatctccacgctcatcgatgacggcgtgcacgagn 114
                |||| |||| ||| || |||||||||||||| ||||| ||||| || |||||||||||| 
Sbjct: 19282261 aggtgaacagcaaggcgacggtgatgatctcgacgctgatcgacgagggcgtgcacgag- 19282319

                                                              
Query: 115      aggatcatcctgcccgagttcccctacttgaccgacgagaatggag 160
                |||||||||||||| |||||||||||| | ||||| ||||| ||||
Sbjct: 19282320 aggatcatcctgccggagttcccctacctcaccgatgagaacggag 19282365



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 63/70 (90%)
 Strand = Plus / Plus

                                                                            
Query: 159      agatatttacttcgaggtcgacaacgacgacgcggtcatggaaaacattatgggagacga 218
                |||||||||||||||||||||||||||||||||  || |||| | ||| |||||||||||
Sbjct: 19282512 agatatttacttcgaggtcgacaacgacgacgccctcctggagagcatcatgggagacga 19282571

                          
Query: 219      caagattgcg 228
                ||||| ||||
Sbjct: 19282572 caagactgcg 19282581



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 259      gtctttgctgacttggatct 278
                ||||||||||||||||||||
Sbjct: 19282717 gtctttgctgacttggatct 19282736



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 36/40 (90%), Gaps = 1/40 (2%)
 Strand = Plus / Plus

                                                        
Query: 1        cgacggcgagcccgcgcgcctcaccgnacgccgaatccgc 40
                ||||||||||||||| | |||||||| ||||||| |||||
Sbjct: 19281989 cgacggcgagcccgcccacctcaccg-acgccgagtccgc 19282027
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>dbj|AK107059.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-D11, full
           insert sequence
          Length = 1783

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 92/106 (86%), Gaps = 1/106 (0%)
 Strand = Plus / Minus

                                                                       
Query: 55  aggtcaacaacaatgcaacggtgatgatctccacgctcatcgatgacggcgtgcacgagn 114
           |||| |||| ||| || |||||||||||||| ||||| ||||| || |||||||||||| 
Sbjct: 858 aggtgaacagcaaggcgacggtgatgatctcgacgctgatcgacgagggcgtgcacgag- 800

                                                         
Query: 115 aggatcatcctgcccgagttcccctacttgaccgacgagaatggag 160
           |||||||||||||| |||||||||||| | ||||| ||||| ||||
Sbjct: 799 aggatcatcctgccggagttcccctacctcaccgatgagaacggag 754



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 63/70 (90%)
 Strand = Plus / Minus

                                                                       
Query: 159 agatatttacttcgaggtcgacaacgacgacgcggtcatggaaaacattatgggagacga 218
           |||||||||||||||||||||||||||||||||  || |||| | ||| |||||||||||
Sbjct: 607 agatatttacttcgaggtcgacaacgacgacgccctcctggagagcatcatgggagacga 548

                     
Query: 219 caagattgcg 228
           ||||| ||||
Sbjct: 547 caagactgcg 538



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 36/40 (90%), Gaps = 1/40 (2%)
 Strand = Plus / Minus

                                                    
Query: 1    cgacggcgagcccgcgcgcctcaccgnacgccgaatccgc 40
            ||||||||||||||| | |||||||| ||||||| |||||
Sbjct: 1130 cgacggcgagcccgcccacctcaccg-acgccgagtccgc 1092



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 259 gtctttgctgacttggatct 278
           ||||||||||||||||||||
Sbjct: 402 gtctttgctgacttggatct 383
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 92/106 (86%), Gaps = 1/106 (0%)
 Strand = Plus / Plus

                                                                            
Query: 55       aggtcaacaacaatgcaacggtgatgatctccacgctcatcgatgacggcgtgcacgagn 114
                |||| |||| ||| || |||||||||||||| ||||| ||||| || |||||||||||| 
Sbjct: 19441810 aggtgaacagcaaggcgacggtgatgatctcgacgctgatcgacgagggcgtgcacgag- 19441868

                                                              
Query: 115      aggatcatcctgcccgagttcccctacttgaccgacgagaatggag 160
                |||||||||||||| |||||||||||| | ||||| ||||| ||||
Sbjct: 19441869 aggatcatcctgccggagttcccctacctcaccgatgagaacggag 19441914



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 63/70 (90%)
 Strand = Plus / Plus

                                                                            
Query: 159      agatatttacttcgaggtcgacaacgacgacgcggtcatggaaaacattatgggagacga 218
                |||||||||||||||||||||||||||||||||  || |||| | ||| |||||||||||
Sbjct: 19442061 agatatttacttcgaggtcgacaacgacgacgccctcctggagagcatcatgggagacga 19442120

                          
Query: 219      caagattgcg 228
                ||||| ||||
Sbjct: 19442121 caagactgcg 19442130



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 259      gtctttgctgacttggatct 278
                ||||||||||||||||||||
Sbjct: 19442266 gtctttgctgacttggatct 19442285



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 36/40 (90%), Gaps = 1/40 (2%)
 Strand = Plus / Plus

                                                        
Query: 1        cgacggcgagcccgcgcgcctcaccgnacgccgaatccgc 40
                ||||||||||||||| | |||||||| ||||||| |||||
Sbjct: 19441538 cgacggcgagcccgcccacctcaccg-acgccgagtccgc 19441576
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>gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence
          Length = 1207381

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 343    gatgattctggcgattctgat 363
              |||||||||||||||||||||
Sbjct: 935165 gatgattctggcgattctgat 935145
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>ref|XM_721492.1| Plasmodium yoelii yoelii str. 17XNL mature-parasite-infected
            erythrocyte surface antigen (PY06014) partial mRNA
          Length = 2286

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 360  tgatgatgaatatgaggagga 380
            |||||||||||||||||||||
Sbjct: 1125 tgatgatgaatatgaggagga 1145
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>ref|XM_794096.1| PREDICTED: Strongylocentrotus purpuratus similar to Protein KIAA1404
            (LOC594662), partial mRNA
          Length = 2001

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 362  atgatgaatatgaggaggagg 382
            |||||||||||||||||||||
Sbjct: 1319 atgatgaatatgaggaggagg 1339
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>ref|NM_135967.1| Drosophila melanogaster CG13272-RA (CG13272), mRNA
          Length = 2529

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 362  atgatgaatatgaggaggagggcat 386
            |||||||| ||||||||||||||||
Sbjct: 2312 atgatgaagatgaggaggagggcat 2336
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 1       cgacggcgagcccgcgcgcct 21
               |||||||||||||||||||||
Sbjct: 4280804 cgacggcgagcccgcgcgcct 4280784
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>gb|AC009250.3|AC009250 Drosophila melanogaster, chromosome 2L, region 36B-36B, BAC clone
              BACR27M18, complete sequence
          Length = 170362

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 362    atgatgaatatgaggaggagggcat 386
              |||||||| ||||||||||||||||
Sbjct: 152125 atgatgaagatgaggaggagggcat 152101
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>gb|AE009672.1| Brucella melitensis 16M chromosome II, section 34 of 107 of the
            complete sequence
          Length = 11096

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 343  gatgattctggcgattctgat 363
            |||||||||||||||||||||
Sbjct: 7786 gatgattctggcgattctgat 7806
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>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0554A06
          Length = 165311

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1      cgacggcgagcccgcgcgcct 21
              |||||||||||||||||||||
Sbjct: 126025 cgacggcgagcccgcgcgcct 126005
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>gb|AE017224.1| Brucella abortus biovar 1 str. 9-941 chromosome II, complete sequence
          Length = 1162204

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 343    gatgattctggcgattctgat 363
              |||||||||||||||||||||
Sbjct: 282016 gatgattctggcgattctgat 282036
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>dbj|AK109842.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-E02, full
           insert sequence
          Length = 1500

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 1   cgacggcgagcccgcgcgcct 21
           |||||||||||||||||||||
Sbjct: 872 cgacggcgagcccgcgcgcct 852
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>gb|BT021271.1| Drosophila melanogaster RE46655 full insert cDNA
          Length = 3350

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 362  atgatgaatatgaggaggagggcat 386
            |||||||| ||||||||||||||||
Sbjct: 2841 atgatgaagatgaggaggagggcat 2865
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>gb|AE003652.2| Drosophila melanogaster chromosome 2L, section 61 of 83 of the complete
              sequence
          Length = 262525

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 362    atgatgaatatgaggaggagggcat 386
              |||||||| ||||||||||||||||
Sbjct: 199700 atgatgaagatgaggaggagggcat 199724
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>emb|AM040265.1| Brucella melitensis biovar Abortus chromosome II, complete sequence,
              strain 2308
          Length = 1156948

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 343    gatgattctggcgattctgat 363
              |||||||||||||||||||||
Sbjct: 282085 gatgattctggcgattctgat 282105
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>ref|XM_631324.1| Dictyostelium discoideum hypothetical protein (DDB0188242), partial
            mRNA
          Length = 3141

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 343  gatgattctggcgattctgatgatgaatatga 374
            ||||||||||  ||||||||||||||| ||||
Sbjct: 2032 gatgattctgaagattctgatgatgaagatga 2063
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>gb|AC024824.1| Caenorhabditis elegans cosmid Y55B1BR, complete sequence
          Length = 46162

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 358  tctgatgatgaatatgaggaggag 381
            |||||||||||| |||||||||||
Sbjct: 2897 tctgatgatgaagatgaggaggag 2920
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 117    gatcatcctgcccgagttcc 136
              ||||||||||||||||||||
Sbjct: 528209 gatcatcctgcccgagttcc 528228
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>gb|AF438230.1| Dirofilaria immitis nuclear receptor RXR (RXR) gene, complete cds
          Length = 11669

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 455  ttgaaactgtaaattcttgt 474
            ||||||||||||||||||||
Sbjct: 3621 ttgaaactgtaaattcttgt 3602
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>gb|AF438229.1| Dirofilaria immitis nuclear receptor RXR (RXR) mRNA, complete cds
          Length = 1527

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 455 ttgaaactgtaaattcttgt 474
           ||||||||||||||||||||
Sbjct: 357 ttgaaactgtaaattcttgt 338
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>ref|XM_760911.1| Theileria parva strain Muguga chromosome 1 hypothetical protein
            (TP01_0484) partial mRNA
          Length = 8760

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 360  tgatgatgaatatgaggaggaggg 383
            |||||||||| |||||||||||||
Sbjct: 1863 tgatgatgaagatgaggaggaggg 1886
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>emb|AL354739.15| Human DNA sequence from clone RP11-379K8 on chromosome 13, complete
             sequence
          Length = 179790

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 343   gatgattctggcgattctgatgat 366
             ||||||||||| ||||||||||||
Sbjct: 92119 gatgattctggtgattctgatgat 92096
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>emb|AL353052.4| Human DNA sequence from clone RP5-865N13 on chromosome 1 Contains two
             novel genes, complete sequence
          Length = 120045

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 454   cttgaaactgtaaattcttgtcat 477
             |||||| |||||||||||||||||
Sbjct: 59422 cttgaatctgtaaattcttgtcat 59445
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>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome
          Length = 4171146

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 176    tcgacaacgacgacgcggtc 195
              ||||||||||||||||||||
Sbjct: 864450 tcgacaacgacgacgcggtc 864431
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>gb|AF097739.2| Rhodospirillum rubrum ADP-glucose pyrophosphorylase (glgC) gene,
           complete cds
          Length = 1300

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 170 tcgaggtcgacaacgacgac 189
           ||||||||||||||||||||
Sbjct: 555 tcgaggtcgacaacgacgac 574
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 170     tcgaggtcgacaacgacgac 189
               ||||||||||||||||||||
Sbjct: 2608670 tcgaggtcgacaacgacgac 2608689
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>ref|NM_064797.2| Caenorhabditis elegans Y55B1BR.3 (Y55B1BR.3) mRNA, complete cds
          Length = 2247

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 358 tctgatgatgaatatgaggaggag 381
           |||||||||||| |||||||||||
Sbjct: 907 tctgatgatgaagatgaggaggag 930
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>dbj|AB210810.1| Ciona intestinalis mRNA for zinc finger protein, complete cds,
           clone: cidg812j04
          Length = 1316

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 355 gattctgatgatgaatatga 374
           ||||||||||||||||||||
Sbjct: 593 gattctgatgatgaatatga 612
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>gb|AC011093.6|AC011093 Homo sapiens, clone RP11-1L24, complete sequence
          Length = 161151

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 343    gatgattctggcgattctgatgat 366
              ||||||||||| ||||||||||||
Sbjct: 136851 gatgattctggtgattctgatgat 136828
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>gb|AE015924.1| Porphyromonas gingivalis W83, complete genome
          Length = 2343476

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 287    cgtcatcaacttcatttgca 306
              ||||||||||||||||||||
Sbjct: 529950 cgtcatcaacttcatttgca 529969
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>emb|X76126.1|TTTAP1PA T.thermophila TAP1 gene polyA signal with multiple stop codons
          Length = 1164

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 349 tctggcgattctgatgatga 368
           ||||||||||||||||||||
Sbjct: 382 tctggcgattctgatgatga 401



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 349 tctggcgattctgatgatga 368
           ||||||||||||||||||||
Sbjct: 217 tctggcgattctgatgatga 236
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>emb|X76125.1|TTTAP1IN T.thermophila TAP1 gene
          Length = 1575

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 349 tctggcgattctgatgatga 368
           ||||||||||||||||||||
Sbjct: 559 tctggcgattctgatgatga 578



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 349 tctggcgattctgatgatga 368
           ||||||||||||||||||||
Sbjct: 394 tctggcgattctgatgatga 413


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,076,725
Number of Sequences: 3902068
Number of extensions: 3076725
Number of successful extensions: 59476
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59213
Number of HSP's gapped (non-prelim): 255
length of query: 536
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 513
effective length of database: 17,143,297,704
effective search space: 8794511722152
effective search space used: 8794511722152
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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