ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags30p06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_470957.1| Oryza sativa (japonica cultivar-group), predic... 329 5e-87
2dbj|AK101740.1| Oryza sativa (japonica cultivar-group) cDNA clon... 329 5e-87
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 103 6e-19
4emb|AL606442.3|OSJN00014 Oryza sativa genomic DNA, chromosome 4,... 103 6e-19
5gb|AY110504.1| Zea mays CL32751_-1 mRNA sequence 96 1e-16
6gb|AC130800.23| Medicago truncatula clone mth2-36b7, complete se... 56 1e-04
7gb|DQ091761.1| Medicago truncatula N-acylethanolamine amidohydro... 56 1e-04
8gb|AC148396.3| Medicago truncatula chromosome 2 BAC clone mth2-1... 56 1e-04
9gb|BT013475.1| Lycopersicon esculentum clone 132142R, mRNA sequence 52 0.002
10emb|BX548026.10| Zebrafish DNA sequence from clone CH211-193D9, ... 42 1.8
11emb|AL157957.4|CNS01RGF Human chromosome 14 DNA sequence BAC R-9... 42 1.8
12gb|AC166159.2| Mus musculus BAC clone RP24-129B16 from chromosom... 40 7.3
13gb|AC136471.1| Solanum demissum chromosome 11 BAC PGEC561 genomi... 40 7.3
14ref|NM_001007822.1| Gallus gallus baculoviral IAP repeat-contain... 40 7.3
15gb|AC131106.4| Mus musculus chromosome 15 clone RP23-301M20, com... 40 7.3
16gb|AC160540.7| Mus musculus chromosome 7, clone RP23-44O19, comp... 40 7.3
17gb|AC158983.2| Mus musculus BAC clone RP23-264L8 from chromosome... 40 7.3
18gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.3
19emb|Z73906.1|CED2030 Caenorhabditis elegans Cosmid D2030, comple... 40 7.3
20gb|AC132249.3| Mus musculus BAC clone RP24-434O21 from chromosom... 40 7.3
21gb|AC122911.4| Mus musculus BAC clone RP23-60K16 from 8, complet... 40 7.3
22gb|AC122818.4| Mus musculus BAC clone RP23-243O16 from 17, compl... 40 7.3
23gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.3
24emb|BX842653.1| Bdellovibrio bacteriovorus complete genome, stra... 40 7.3
25gb|AC163652.3| Mus musculus BAC clone RP24-315D17 from chromosom... 40 7.3
26gb|AC022762.8| Homo sapiens chromosome 11, clone RP11-290F24, co... 40 7.3
27gb|AC008425.6| Homo sapiens chromosome 5 clone CTC-304O9, comple... 40 7.3
28gb|AC158519.2| Mus musculus BAC clone RP24-87O4 from chromosome ... 40 7.3
29dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
30gb|AC008142.2|AC008142 Drosophila melanogaster, chromosome 3R, r... 40 7.3
31gb|AC171212.3| Gallus gallus BAC clone CH261-72C23 from chromoso... 40 7.3
32gb|AC116892.10| Mus musculus chromosome 8, clone RP24-529J16, co... 40 7.3
33gb|AC010849.3|AC010849 Homo sapiens chromosome 14 clone CTD-2540... 40 7.3
34gb|AE003727.3| Drosophila melanogaster chromosome 3R, section 65... 40 7.3
35emb|AL160237.4|CNS01RH1 Human chromosome 14 DNA sequence BAC R-3... 40 7.3
36emb|AL135999.4|CNS01DVP Human chromosome 14 DNA sequence BAC R-6... 40 7.3
37emb|AL109758.3|CNS018OV Human chromosome 14 DNA sequence BAC R-8... 40 7.3
38gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome 40 7.3
39gb|AF008592.1|AF008592 Gallus gallus IAP homolog (IAP1) mRNA, nu... 40 7.3
40emb|AL645477.8| Mouse DNA sequence from clone RP23-155L18 on chr... 40 7.3
41emb|AL929218.3| Mouse DNA sequence from clone RP23-447G18 on chr... 40 7.3
42gb|AF311289.1| Gallus gallus apoptosis inhibitor ch-IAP1 gene, p... 40 7.3 
>ref|XM_470957.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1806

 Score =  329 bits (166), Expect = 5e-87
 Identities = 375/444 (84%), Gaps = 3/444 (0%)
 Strand = Plus / Plus

                                                                        
Query: 40   atcggtgaaagtgggaaaatatacagagtggtttcatgatgtccctgataatgaggtctc 99
            |||||||||| | ||||||||||| |||||||||||||||||| | |||  |||  ||||
Sbjct: 1146 atcggtgaaaataggaaaatatactgagtggtttcatgatgtctccgatcgtgatatctc 1205

                                                                        
Query: 100  aaatacatgtgaagatgcacttaacctcctatgcagcaccttcggatgtcagatagaaga 159
             ||||||||||| |||||||||||||| || ||||||| |||||||||||| ||||||||
Sbjct: 1206 taatacatgtgaggatgcacttaaccttctttgcagcagcttcggatgtcaaatagaaga 1265

                                                                        
Query: 160  gataatcttaccagagcttgaggagatgcgtacagcccatcttgtctctattggctcaga 219
             |||||  | ||||| ||||||||||||||||| |||||| ||||||| |||||| ||||
Sbjct: 1266 aataatactgccagaacttgaggagatgcgtactgcccatgttgtctcaattggcacaga 1325

                                                                        
Query: 220  agcattctccgacatgaatgctcattaccaagcagggaggcgaacggaaatgacgttaga 279
            | ||||||  ||  ||||| ||||||||  |||||| |  ||||| ||| | ||||||||
Sbjct: 1326 atcattctgtgatttgaatcctcattacagagcaggaaaacgaactgaatttacgttaga 1385

                                                                        
Query: 280  tactcgaacaagtttggcactttttaggtcattcacttcagcagattatgttgcttctca 339
             |||||||||||||||||||||||| | |||||||||||  | || ||||||||||||||
Sbjct: 1386 cactcgaacaagtttggcactttttggatcattcacttcgactgactatgttgcttctca 1445

                                                                        
Query: 340  atctctgaggagaaggataatgtactatcacatggaagctttcaagaaggttgacgtcat 399
            |    | |||||||||||||||||||||||||  |||||||||||||||||||| |||||
Sbjct: 1446 acgaataaggagaaggataatgtactatcacaatgaagctttcaagaaggttgatgtcat 1505

                                                                        
Query: 400  agcaacccctacaaccggcatgaccgcgccaaaaataccaccaagtgctttaaa---agg 456
            |||||| |||||||| ||||| || || ||| ||||||||| |||| || | ||   |||
Sbjct: 1506 agcaactcctacaactggcatcactgctccagaaataccacaaagttctctgaagttagg 1565

                                    
Query: 457  agagtctgattatgttgtgtcagc 480
            ||||||  |||| |||||||||||
Sbjct: 1566 agagtccaattacgttgtgtcagc 1589
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>dbj|AK101740.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061L19, full
            insert sequence
          Length = 2087

 Score =  329 bits (166), Expect = 5e-87
 Identities = 375/444 (84%), Gaps = 3/444 (0%)
 Strand = Plus / Plus

                                                                        
Query: 40   atcggtgaaagtgggaaaatatacagagtggtttcatgatgtccctgataatgaggtctc 99
            |||||||||| | ||||||||||| |||||||||||||||||| | |||  |||  ||||
Sbjct: 1287 atcggtgaaaataggaaaatatactgagtggtttcatgatgtctccgatcgtgatatctc 1346

                                                                        
Query: 100  aaatacatgtgaagatgcacttaacctcctatgcagcaccttcggatgtcagatagaaga 159
             ||||||||||| |||||||||||||| || ||||||| |||||||||||| ||||||||
Sbjct: 1347 taatacatgtgaggatgcacttaaccttctttgcagcagcttcggatgtcaaatagaaga 1406

                                                                        
Query: 160  gataatcttaccagagcttgaggagatgcgtacagcccatcttgtctctattggctcaga 219
             |||||  | ||||| ||||||||||||||||| |||||| ||||||| |||||| ||||
Sbjct: 1407 aataatactgccagaacttgaggagatgcgtactgcccatgttgtctcaattggcacaga 1466

                                                                        
Query: 220  agcattctccgacatgaatgctcattaccaagcagggaggcgaacggaaatgacgttaga 279
            | ||||||  ||  ||||| ||||||||  |||||| |  ||||| ||| | ||||||||
Sbjct: 1467 atcattctgtgatttgaatcctcattacagagcaggaaaacgaactgaatttacgttaga 1526

                                                                        
Query: 280  tactcgaacaagtttggcactttttaggtcattcacttcagcagattatgttgcttctca 339
             |||||||||||||||||||||||| | |||||||||||  | || ||||||||||||||
Sbjct: 1527 cactcgaacaagtttggcactttttggatcattcacttcgactgactatgttgcttctca 1586

                                                                        
Query: 340  atctctgaggagaaggataatgtactatcacatggaagctttcaagaaggttgacgtcat 399
            |    | |||||||||||||||||||||||||  |||||||||||||||||||| |||||
Sbjct: 1587 acgaataaggagaaggataatgtactatcacaatgaagctttcaagaaggttgatgtcat 1646

                                                                        
Query: 400  agcaacccctacaaccggcatgaccgcgccaaaaataccaccaagtgctttaaa---agg 456
            |||||| |||||||| ||||| || || ||| ||||||||| |||| || | ||   |||
Sbjct: 1647 agcaactcctacaactggcatcactgctccagaaataccacaaagttctctgaagttagg 1706

                                    
Query: 457  agagtctgattatgttgtgtcagc 480
            ||||||  |||| |||||||||||
Sbjct: 1707 agagtccaattacgttgtgtcagc 1730
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score =  103 bits (52), Expect = 6e-19
 Identities = 64/68 (94%)
 Strand = Plus / Minus

                                                                          
Query: 347    aggagaaggataatgtactatcacatggaagctttcaagaaggttgacgtcatagcaacc 406
              |||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||| 
Sbjct: 181082 aggagaaggataatgtactatcacaatgaagctttcaagaaggttgatgtcatagcaact 181023

                      
Query: 407    cctacaac 414
              ||||||||
Sbjct: 181022 cctacaac 181015



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 74/85 (87%)
 Strand = Plus / Minus

                                                                          
Query: 66     agtggtttcatgatgtccctgataatgaggtctcaaatacatgtgaagatgcacttaacc 125
              ||||||||||||||||| | |||  |||  |||| ||||||||||| |||||||||||||
Sbjct: 182155 agtggtttcatgatgtctccgatcgtgatatctctaatacatgtgaggatgcacttaacc 182096

                                       
Query: 126    tcctatgcagcaccttcggatgtca 150
              | || ||||||| ||||||||||||
Sbjct: 182095 ttctttgcagcagcttcggatgtca 182071



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Minus

                                                                          
Query: 272    acgttagatactcgaacaagtttggcactttttaggtcattcacttcagcagattatgtt 331
              |||||||| |||||||||||||||||||||||| | |||||||||||  | || ||||||
Sbjct: 181347 acgttagacactcgaacaagtttggcactttttggatcattcacttcgactgactatgtt 181288

                       
Query: 332    gcttctcaa 340
              |||||||||
Sbjct: 181287 gcttctcaa 181279



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 90/107 (84%)
 Strand = Plus / Minus

                                                                          
Query: 150    agatagaagagataatcttaccagagcttgaggagatgcgtacagcccatcttgtctcta 209
              |||||||||| |||||  | ||||| ||||||||||||||||| |||||| ||||||| |
Sbjct: 181594 agatagaagaaataatactgccagaacttgaggagatgcgtactgcccatgttgtctcaa 181535

                                                             
Query: 210    ttggctcagaagcattctccgacatgaatgctcattaccaagcaggg 256
              ||||| ||||| ||||||  ||  ||||| ||||||||  |||||||
Sbjct: 181534 ttggcacagaatcattctgtgatttgaatcctcattacagagcaggg 181488
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>emb|AL606442.3|OSJN00014 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0068L06,
              complete sequence
          Length = 145517

 Score =  103 bits (52), Expect = 6e-19
 Identities = 64/68 (94%)
 Strand = Plus / Minus

                                                                          
Query: 347    aggagaaggataatgtactatcacatggaagctttcaagaaggttgacgtcatagcaacc 406
              |||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||| 
Sbjct: 112369 aggagaaggataatgtactatcacaatgaagctttcaagaaggttgatgtcatagcaact 112310

                      
Query: 407    cctacaac 414
              ||||||||
Sbjct: 112309 cctacaac 112302



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 74/85 (87%)
 Strand = Plus / Minus

                                                                          
Query: 66     agtggtttcatgatgtccctgataatgaggtctcaaatacatgtgaagatgcacttaacc 125
              ||||||||||||||||| | |||  |||  |||| ||||||||||| |||||||||||||
Sbjct: 113442 agtggtttcatgatgtctccgatcgtgatatctctaatacatgtgaggatgcacttaacc 113383

                                       
Query: 126    tcctatgcagcaccttcggatgtca 150
              | || ||||||| ||||||||||||
Sbjct: 113382 ttctttgcagcagcttcggatgtca 113358



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Minus

                                                                          
Query: 272    acgttagatactcgaacaagtttggcactttttaggtcattcacttcagcagattatgtt 331
              |||||||| |||||||||||||||||||||||| | |||||||||||  | || ||||||
Sbjct: 112634 acgttagacactcgaacaagtttggcactttttggatcattcacttcgactgactatgtt 112575

                       
Query: 332    gcttctcaa 340
              |||||||||
Sbjct: 112574 gcttctcaa 112566



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 90/107 (84%)
 Strand = Plus / Minus

                                                                          
Query: 150    agatagaagagataatcttaccagagcttgaggagatgcgtacagcccatcttgtctcta 209
              |||||||||| |||||  | ||||| ||||||||||||||||| |||||| ||||||| |
Sbjct: 112881 agatagaagaaataatactgccagaacttgaggagatgcgtactgcccatgttgtctcaa 112822

                                                             
Query: 210    ttggctcagaagcattctccgacatgaatgctcattaccaagcaggg 256
              ||||| ||||| ||||||  ||  ||||| ||||||||  |||||||
Sbjct: 112821 ttggcacagaatcattctgtgatttgaatcctcattacagagcaggg 112775
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>gb|AY110504.1| Zea mays CL32751_-1 mRNA sequence
          Length = 589

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 143/176 (81%), Gaps = 3/176 (1%)
 Strand = Plus / Minus

                                                                       
Query: 347 aggagaaggataatgtactatcacatggaagctttcaagaaggttgacgtcatagcaacc 406
           ||||| ||||||||| | |||| |||||||||||||||||||||  | ||||||||||| 
Sbjct: 561 aggaggaggataatgcattatcncatggaagctttcaagaaggtcaatgtcatagcaact 502

                                                                       
Query: 407 cctacaaccggcatgaccgcgccaaaaataccaccaagtgctttaaa---aggagagtct 463
           |||||||| ||||| || || ||     |||| ||||||||| | ||   ||||||||| 
Sbjct: 501 cctacaactggcattactgctccnnnnntacctccaagtgctctgaagtcaggagagtca 442

                                                                   
Query: 464 gattatgttgtgtcagccaagctgatgcaattcatttttgccgggaaccttcttgg 519
           |||||||||||||||||  |  |||||| ||||||  | || ||||||||||||||
Sbjct: 441 gattatgttgtgtcagcttacttgatgcgattcatcatagcagggaaccttcttgg 386
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>gb|AC130800.23| Medicago truncatula clone mth2-36b7, complete sequence
          Length = 133868

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                    
Query: 278  gatactcgaacaagtttggcactttttaggtcattcacttcagcagattatgttgc 333
            |||||||| |||||||||||||||||   |||||| ||  ||||||||||||||||
Sbjct: 5008 gatactcgcacaagtttggcacttttccagtcatttaccgcagcagattatgttgc 5063



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                             
Query: 168  taccagagcttgaggagatgcgtacagcccatcttgtctctattggctc 216
            |||||||| ||| ||||||||| || ||||||||||| || ||||||||
Sbjct: 4481 taccagagattgtggagatgcgaactgcccatcttgtttccattggctc 4529
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>gb|DQ091761.1| Medicago truncatula N-acylethanolamine amidohydrolase mRNA, complete
            cds
          Length = 2336

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                    
Query: 278  gatactcgaacaagtttggcactttttaggtcattcacttcagcagattatgttgc 333
            |||||||| |||||||||||||||||   |||||| ||  ||||||||||||||||
Sbjct: 1520 gatactcgcacaagtttggcacttttccagtcatttaccgcagcagattatgttgc 1575



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                             
Query: 168  taccagagcttgaggagatgcgtacagcccatcttgtctctattggctc 216
            |||||||| ||| ||||||||| || ||||||||||| || ||||||||
Sbjct: 1410 taccagagattgtggagatgcgaactgcccatcttgtttccattggctc 1458
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>gb|AC148396.3| Medicago truncatula chromosome 2 BAC clone mth2-17k4, complete sequence
          Length = 108273

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                     
Query: 278   gatactcgaacaagtttggcactttttaggtcattcacttcagcagattatgttgc 333
             |||||||| |||||||||||||||||   |||||| ||  ||||||||||||||||
Sbjct: 99271 gatactcgcacaagtttggcacttttccagtcatttaccgcagcagattatgttgc 99326



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                              
Query: 168   taccagagcttgaggagatgcgtacagcccatcttgtctctattggctc 216
             |||||||| ||| ||||||||| || ||||||||||| || ||||||||
Sbjct: 98744 taccagagattgtggagatgcgaactgcccatcttgtttccattggctc 98792
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>gb|BT013475.1| Lycopersicon esculentum clone 132142R, mRNA sequence
          Length = 2027

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                        
Query: 278  gatactcgaacaagtttggcactttttaggtcattcacttcagcagattatgttgcttct 337
            |||||||| |||| | ||||| ||||| | ||||| ||| ||||||||||||||||| ||
Sbjct: 1664 gatactcgtacaaatctggcattttttcgttcatttactgcagcagattatgttgctgct 1723

              
Query: 338  ca 339
            ||
Sbjct: 1724 ca 1725
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>emb|BX548026.10| Zebrafish DNA sequence from clone CH211-193D9, complete sequence
          Length = 147902

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 331    tgcttctcaatctctgaggag 351
              |||||||||||||||||||||
Sbjct: 141882 tgcttctcaatctctgaggag 141862
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>emb|AL157957.4|CNS01RGF Human chromosome 14 DNA sequence BAC R-969O13 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 202212

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 430    aaaaataccaccaagtgctttaaaa 454
              ||||||||||||||||||| |||||
Sbjct: 107034 aaaaataccaccaagtgctataaaa 107058
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>gb|AC166159.2| Mus musculus BAC clone RP24-129B16 from chromosome 15, complete sequence
          Length = 216481

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 515    cttggcttgcctgccattac 534
              ||||||||||||||||||||
Sbjct: 168939 cttggcttgcctgccattac 168920
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>gb|AC136471.1| Solanum demissum chromosome 11 BAC PGEC561 genomic sequence, complete
             sequence
          Length = 123428

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 170   ccagagcttgaggagatgcg 189
             ||||||||||||||||||||
Sbjct: 83084 ccagagcttgaggagatgcg 83065
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>ref|NM_001007822.1| Gallus gallus baculoviral IAP repeat-containing 2 (BIRC2), mRNA
          Length = 4457

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 431 aaaataccaccaagtgctttaaaa 454
           |||||||||||||||| |||||||
Sbjct: 805 aaaataccaccaagtgatttaaaa 782
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>gb|AC131106.4| Mus musculus chromosome 15 clone RP23-301M20, complete sequence
          Length = 218875

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 515   cttggcttgcctgccattac 534
             ||||||||||||||||||||
Sbjct: 15115 cttggcttgcctgccattac 15096
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>gb|AC160540.7| Mus musculus chromosome 7, clone RP23-44O19, complete sequence
          Length = 221807

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 327    atgttgcttctcaatctctg 346
              ||||||||||||||||||||
Sbjct: 184955 atgttgcttctcaatctctg 184936
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>gb|AC158983.2| Mus musculus BAC clone RP23-264L8 from chromosome 14, complete sequence
          Length = 218519

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 60     atacagagtggtttcatgatgtccctga 87
              ||||| |||| |||||||||||||||||
Sbjct: 151304 atacatagtgttttcatgatgtccctga 151331
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 488     atgcaattcatttttgccgg 507
               ||||||||||||||||||||
Sbjct: 2134837 atgcaattcatttttgccgg 2134818
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>emb|Z73906.1|CED2030 Caenorhabditis elegans Cosmid D2030, complete sequence
          Length = 42665

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 267   aaatgacgttagatactcgaacaa 290
             |||||| |||||||||||||||||
Sbjct: 33252 aaatgaggttagatactcgaacaa 33229
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>gb|AC132249.3| Mus musculus BAC clone RP24-434O21 from chromosome 6, complete sequence
          Length = 180332

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 430   aaaaataccaccaagtgctt 449
             ||||||||||||||||||||
Sbjct: 82696 aaaaataccaccaagtgctt 82677
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>gb|AC122911.4| Mus musculus BAC clone RP23-60K16 from 8, complete sequence
          Length = 150400

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 333   cttctcaatctctgaggagaagga 356
             ||||||||| ||||||||||||||
Sbjct: 80396 cttctcaatttctgaggagaagga 80373
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>gb|AC122818.4| Mus musculus BAC clone RP23-243O16 from 17, complete sequence
          Length = 167735

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 437   ccaccaagtgctttaaaagg 456
             ||||||||||||||||||||
Sbjct: 20812 ccaccaagtgctttaaaagg 20793
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>gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0030C11, complete sequence
          Length = 156647

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 488   atgcaattcatttttgccgg 507
             ||||||||||||||||||||
Sbjct: 25131 atgcaattcatttttgccgg 25112
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>emb|BX842653.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 8/11
          Length = 347636

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 259    gcgaacggaaatgacgttag 278
              ||||||||||||||||||||
Sbjct: 172668 gcgaacggaaatgacgttag 172649
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>gb|AC163652.3| Mus musculus BAC clone RP24-315D17 from chromosome 17, complete sequence
          Length = 171992

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 437    ccaccaagtgctttaaaagg 456
              ||||||||||||||||||||
Sbjct: 146011 ccaccaagtgctttaaaagg 145992
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>gb|AC022762.8| Homo sapiens chromosome 11, clone RP11-290F24, complete sequence
          Length = 186604

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 511   ccttcttggcttgcctgcca 530
             ||||||||||||||||||||
Sbjct: 87569 ccttcttggcttgcctgcca 87588
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>gb|AC008425.6| Homo sapiens chromosome 5 clone CTC-304O9, complete sequence
          Length = 119579

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 440   ccaagtgctttaaaaggagagtct 463
             |||||||||||||| |||||||||
Sbjct: 47848 ccaagtgctttaaatggagagtct 47871
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>gb|AC158519.2| Mus musculus BAC clone RP24-87O4 from chromosome 14, complete
            sequence
          Length = 236374

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 53   ggaaaatatacagagtggtttcat 76
            |||||||||||||| |||||||||
Sbjct: 7408 ggaaaatatacagattggtttcat 7431
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 488     atgcaattcatttttgccgg 507
               ||||||||||||||||||||
Sbjct: 2134849 atgcaattcatttttgccgg 2134830
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>gb|AC008142.2|AC008142 Drosophila melanogaster, chromosome 3R, region 92B-92B, BAC clone
             BACR48D03, complete sequence
          Length = 175917

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 432   aaataccaccaagtgcttta 451
             ||||||||||||||||||||
Sbjct: 47571 aaataccaccaagtgcttta 47552
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>gb|AC171212.3| Gallus gallus BAC clone CH261-72C23 from chromosome ul, complete
             sequence
          Length = 202705

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 299   ctttttaggtcattcacttcagca 322
             ||||||||||| ||||||||||||
Sbjct: 78653 ctttttaggtcgttcacttcagca 78630
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>gb|AC116892.10| Mus musculus chromosome 8, clone RP24-529J16, complete sequence
          Length = 176340

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    ctcaaatacatgtgaagatg 116
             ||||||||||||||||||||
Sbjct: 78033 ctcaaatacatgtgaagatg 78052
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>gb|AC010849.3|AC010849 Homo sapiens chromosome 14 clone CTD-2540C19 map 14q31, complete sequence
          Length = 151659

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 159    agataatcttaccagagctt 178
              ||||||||||||||||||||
Sbjct: 120977 agataatcttaccagagctt 120958
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>gb|AE003727.3| Drosophila melanogaster chromosome 3R, section 65 of 118 of the complete
              sequence
          Length = 242618

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 432    aaataccaccaagtgcttta 451
              ||||||||||||||||||||
Sbjct: 143185 aaataccaccaagtgcttta 143166
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>emb|AL160237.4|CNS01RH1 Human chromosome 14 DNA sequence BAC R-388E23 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 206533

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 54     gaaaatatacagagtggtttcatg 77
              |||||||||||||||| |||||||
Sbjct: 178857 gaaaatatacagagtgttttcatg 178834
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>emb|AL135999.4|CNS01DVP Human chromosome 14 DNA sequence BAC R-66N24 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 196311

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 54     gaaaatatacagagtggtttcatg 77
              |||||||||||||||| |||||||
Sbjct: 182615 gaaaatatacagagtgttttcatg 182638
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>emb|AL109758.3|CNS018OV Human chromosome 14 DNA sequence BAC R-873E2 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 209512

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 480    ccaagctgatgcaattcatttttg 503
              |||||||| |||||||||||||||
Sbjct: 173736 ccaagctggtgcaattcatttttg 173759
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>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome
          Length = 4096345

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 448     tttaaaaggagagtctgatt 467
               ||||||||||||||||||||
Sbjct: 1611115 tttaaaaggagagtctgatt 1611134
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>gb|AF008592.1|AF008592 Gallus gallus IAP homolog (IAP1) mRNA, nuclear gene encoding
           mitochondrial protein, complete cds
          Length = 3264

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 431 aaaataccaccaagtgctttaaaa 454
           |||||||||||||||| |||||||
Sbjct: 680 aaaataccaccaagtgatttaaaa 657
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>emb|AL645477.8| Mouse DNA sequence from clone RP23-155L18 on chromosome X, complete
             sequence
          Length = 189131

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 332   gcttctcaatctctgaggagaagg 355
             |||||||| |||||||||||||||
Sbjct: 76267 gcttctcactctctgaggagaagg 76244
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>emb|AL929218.3| Mouse DNA sequence from clone RP23-447G18 on chromosome 2, complete
             sequence
          Length = 58449

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    aaatatacagagtggtttca 75
             ||||||||||||||||||||
Sbjct: 50831 aaatatacagagtggtttca 50850
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>gb|AF311289.1| Gallus gallus apoptosis inhibitor ch-IAP1 gene, promoter and partial
            cds
          Length = 9960

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 431  aaaataccaccaagtgctttaaaa 454
            |||||||||||||||| |||||||
Sbjct: 7677 aaaataccaccaagtgatttaaaa 7654


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,508,963
Number of Sequences: 3902068
Number of extensions: 4508963
Number of successful extensions: 85482
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85331
Number of HSP's gapped (non-prelim): 149
length of query: 536
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 513
effective length of database: 17,143,297,704
effective search space: 8794511722152
effective search space used: 8794511722152
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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