ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags30o16 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY177404.1| Secale cereale O-methyltransferase mRNA, complete cds Length = 1373 Score = 870 bits (439), Expect = 0.0 Identities = 620/678 (91%), Gaps = 3/678 (0%) Strand = Plus / Plus Query: 2 accctttactacctcacgtccatggggctccgctgcgccgtcaagctcggcatcccgacg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111 accctttactacctcacgtccatggggctccgctgcgccgtcaagctcggcatcccgacg 170 Query: 62 gcgatccacaacctcggcggggtctcctcgctggctgacctggcggccgcgctgtccatc 121 ||||||||||||||||| || |||||||||||| | |||||||| || |||||||||||| Sbjct: 171 gcgatccacaacctcggtggcgtctcctcgctgcccgacctggcagctgcgctgtccatc 230 Query: 122 cccgcaagcaagcagccgttccttggccgcctgatgcgcgcgctggtcacctcaggcgtc 181 || |||||||||||||||||||| ||||| || ||||||||||||||||||||||||||| Sbjct: 231 ccggcaagcaagcagccgttcctcggccgtcttatgcgcgcgctggtcacctcaggcgtc 290 Query: 182 ttcgccaacggcggcaagaatgactctggggcagagctcttcggcctgaacccactgtcc 241 ||||||||||| | ||||| |||||| |||| || |||||| |||| ||||| |||||| Sbjct: 291 ttcgccaacgg--gaaagaacgactcttgggcgga-ctcttccgcctcaaccccctgtcc 347 Query: 242 cgcatcctggtggacggcgtcgtcgcggacgagcaccacagccagacgtccttcgtgctg 301 ||||||||||| || |||||||||||||| |||||||||||||||||||||||||| || Sbjct: 348 cgcatcctggttgagggcgtcgtcgcggaggagcaccacagccagacgtccttcgtactc 407 Query: 302 gctgggacgtcccggcactacatggaagctgcgctgggcatggctgactggttcaagaag 361 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 408 gctgggacttcccggcactacatggaagctgcgctggggatggctgactggttcaagaag 467 Query: 362 gacgccaccggaccggtgccatcggtgttcgaggacgtgcatagtgcgtccctcttcgac 421 |||||||| ||||| |||||| ||||||||||||||||||| || ||||||||||||||| Sbjct: 468 gacgccactggacccgtgccaacggtgttcgaggacgtgcacagcgcgtccctcttcgac 527 Query: 422 gagagcacggcggccttggacccggagctcgacgcactggtcacagatggtctggccgcc 481 |||||||| ||||||||||||||||||||||||||||||||||| || ||||| |||||| Sbjct: 528 gagagcaccgcggccttggacccggagctcgacgcactggtcaccgaaggtctcgccgcc 587 Query: 482 cacgacaaccttgggatcggcaccatcatccgtgagtgccatgacctcttcaagggcctt 541 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||| Sbjct: 588 cacgacaaccttgggatcggcaccatcatacgtgagttccatgacctcttcaaggggctt 647 Query: 542 gagtctctaactgactgctgcggtggcgatggaaccacggcgagggccatcaccaaggcc 601 | ||||||||| |||| ||| ||||||| |||||||| | ||||||||||| ||||| Sbjct: 648 gtgtctctaaccgacttctgttgtggcgacggaaccacttccagggccatcactaaggct 707 Query: 602 cacccgcacatcaagtgcaccgtgctggatctccccaaggtgatcgacaaaacttcagct 661 |||||||| | |||| |||||||||||||||||||||||||||||||||||| | || Sbjct: 708 cacccgcatgttaagtttaccgtgctggatctccccaaggtgatcgacaaaactccttct 767 Query: 662 gacggtatagtcaactat 679 |||||||||||||||||| Sbjct: 768 gacggtatagtcaactat 785
>gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0005P21, complete sequence Length = 147381 Score = 135 bits (68), Expect = 2e-28 Identities = 215/264 (81%) Strand = Plus / Plus Query: 388 gttcgaggacgtgcatagtgcgtccctcttcgacgagagcacggcggccttggacccgga 447 ||||||||||||||| | ||||| || |||||||||||||| ||| |||||||||| Sbjct: 119352 gttcgaggacgtgcacggcgcgtcgctgttcgacgagagcactgcgctgctggacccgga 119411 Query: 448 gctcgacgcactggtcacagatggtctggccgcccacgacaaccttgggatcggcaccat 507 ||||||||| | |||| || || ||||| || ||||||||||| || ||||||||||| Sbjct: 119412 gctcgacgccgtcgtcaacgaaggcctggcggcgcacgacaacctcggcatcggcaccat 119471 Query: 508 catccgtgagtgccatgacctcttcaagggccttgagtctctaactgactgctgcggtgg 567 | | | ||||||| ||||||||| ||| || || || || ||||||||||| || Sbjct: 119472 cctgagggagtgccgcgacctcttccgggggctccgttcgctgaccgactgctgcggcgg 119531 Query: 568 cgatggaaccacggcgagggccatcaccaaggcccacccgcacatcaagtgcaccgtgct 627 ||| || || ||||||||||||||| |||||||| |||| || |||||||||| ||||| Sbjct: 119532 cgacggcacgacggcgagggccatcgccaaggcctaccctcatgtcaagtgcactgtgct 119591 Query: 628 ggatctccccaaggtgatcgacaa 651 ||| || ||||||||||||||||| Sbjct: 119592 ggaccttcccaaggtgatcgacaa 119615 Score = 115 bits (58), Expect = 2e-22 Identities = 112/130 (86%) Strand = Plus / Plus Query: 236 ctgtcccgcatcctggtggacggcgtcgtcgcggacgagcaccacagccagacgtccttc 295 |||||||||||||| || || ||||||||||| ||||||||||||||||||||||||||| Sbjct: 119200 ctgtcccgcatcctcgtcgatggcgtcgtcgccgacgagcaccacagccagacgtccttc 119259 Query: 296 gtgctggctgggacgtcccggcactacatggaagctgcgctgggcatggctgactggttc 355 ||||| || | |||||| ||||||||| | || || |||||||| ||| || |||||| Sbjct: 119260 gtgctcgccgcgacgtcgcggcactacctcgaggcggcgctggggctggacgagtggttc 119319 Query: 356 aagaaggacg 365 | |||||||| Sbjct: 119320 aggaaggacg 119329 Score = 91.7 bits (46), Expect = 3e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 8 tactacctcacgtccatggggctccgctgcgccgtcaagctcggcatcccgacggcgatc 67 |||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||| Sbjct: 63279 tactacctcacgtccatgggcctccgctgcgccgtcgagctcggcatcccgaccacgatc 63338 Query: 68 ca 69 || Sbjct: 63339 ca 63340 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 236 ctgtcccgcatcctggtggacggcgtcgtcgcggacgagcaccacagccagacgtccttc 295 ||||||||||||||||| |||||||||||||| ||||||||||| ||||||| || |||| Sbjct: 63501 ctgtcccgcatcctggttgacggcgtcgtcgccgacgagcaccatagccagaggtgcttc 63560 Query: 296 gtgctgg 302 || |||| Sbjct: 63561 gtcctgg 63567 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 8 tactacctcacgtccatggggctccgctgcgccgtcaagctcggcatccc 57 ||||||||||| ||||||| |||||| ||||||||||||||||||||||| Sbjct: 131464 tactacctcacctccatggcgctccggtgcgccgtcaagctcggcatccc 131415 Score = 69.9 bits (35), Expect = 1e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 576 ccacggcgagggccatcaccaaggcccacccgcacatcaagtgcaccgtgctgga 630 ||||||||||||||||| |||||| ||||||||||||||||||| |||||||| Sbjct: 63841 ccacggcgagggccatcgtcaaggcgtacccgcacatcaagtgcacggtgctgga 63895 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 8 tactacctcacgtccatggggctccgctgcgccgtcaagctcggcatcccgacggcgatc 67 ||||||||||| |||| ||| |||||||||||| ||||||| |||||||| || || ||| Sbjct: 118975 tactacctcacctccacgggactccgctgcgccatcaagctgggcatccccaccgccatc 119034 Query: 68 cacaacctcggcgg 81 ||| ||||||||| Sbjct: 119035 caccgcctcggcgg 119048 Score = 44.1 bits (22), Expect = 0.60 Identities = 43/50 (86%) Strand = Plus / Plus Query: 112 gctgtccatccccgcaagcaagcagccgttccttggccgcctgatgcgcg 161 ||||||| |||| || || |||||||||||||| ||||||| ||||||| Sbjct: 119079 gctgtccctcccggcgagtaagcagccgttcctccgccgcctcatgcgcg 119128 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 611 atcaagtgcaccgtgctggatctccccaaggtgatcg 647 |||||||||||||||||||| || || ||||||||| Sbjct: 130846 atcaagtgcaccgtgctggaccttcctcaggtgatcg 130810
>gb|AC135793.4| Oryza sativa chromosome 11 BAC clone OSJNBb0017P15, complete sequence Length = 128418 Score = 135 bits (68), Expect = 2e-28 Identities = 215/264 (81%) Strand = Plus / Plus Query: 388 gttcgaggacgtgcatagtgcgtccctcttcgacgagagcacggcggccttggacccgga 447 ||||||||||||||| | ||||| || |||||||||||||| ||| |||||||||| Sbjct: 5101 gttcgaggacgtgcacggcgcgtcgctgttcgacgagagcactgcgctgctggacccgga 5160 Query: 448 gctcgacgcactggtcacagatggtctggccgcccacgacaaccttgggatcggcaccat 507 ||||||||| | |||| || || ||||| || ||||||||||| || ||||||||||| Sbjct: 5161 gctcgacgccgtcgtcaacgaaggcctggcggcgcacgacaacctcggcatcggcaccat 5220 Query: 508 catccgtgagtgccatgacctcttcaagggccttgagtctctaactgactgctgcggtgg 567 | | | ||||||| ||||||||| ||| || || || || ||||||||||| || Sbjct: 5221 cctgagggagtgccgcgacctcttccgggggctccgttcgctgaccgactgctgcggcgg 5280 Query: 568 cgatggaaccacggcgagggccatcaccaaggcccacccgcacatcaagtgcaccgtgct 627 ||| || || ||||||||||||||| |||||||| |||| || |||||||||| ||||| Sbjct: 5281 cgacggcacgacggcgagggccatcgccaaggcctaccctcatgtcaagtgcactgtgct 5340 Query: 628 ggatctccccaaggtgatcgacaa 651 ||| || ||||||||||||||||| Sbjct: 5341 ggaccttcccaaggtgatcgacaa 5364 Score = 115 bits (58), Expect = 2e-22 Identities = 112/130 (86%) Strand = Plus / Plus Query: 236 ctgtcccgcatcctggtggacggcgtcgtcgcggacgagcaccacagccagacgtccttc 295 |||||||||||||| || || ||||||||||| ||||||||||||||||||||||||||| Sbjct: 4949 ctgtcccgcatcctcgtcgatggcgtcgtcgccgacgagcaccacagccagacgtccttc 5008 Query: 296 gtgctggctgggacgtcccggcactacatggaagctgcgctgggcatggctgactggttc 355 ||||| || | |||||| ||||||||| | || || |||||||| ||| || |||||| Sbjct: 5009 gtgctcgccgcgacgtcgcggcactacctcgaggcggcgctggggctggacgagtggttc 5068 Query: 356 aagaaggacg 365 | |||||||| Sbjct: 5069 aggaaggacg 5078 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 8 tactacctcacgtccatggggctccgctgcgccgtcaagctcggcatccc 57 ||||||||||| ||||||| |||||| ||||||||||||||||||||||| Sbjct: 17213 tactacctcacctccatggcgctccggtgcgccgtcaagctcggcatccc 17164 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 8 tactacctcacgtccatggggctccgctgcgccgtcaagctcggcatcccgacggcgatc 67 ||||||||||| |||| ||| |||||||||||| ||||||| |||||||| || || ||| Sbjct: 4724 tactacctcacctccacgggactccgctgcgccatcaagctgggcatccccaccgccatc 4783 Query: 68 cacaacctcggcgg 81 ||| ||||||||| Sbjct: 4784 caccgcctcggcgg 4797 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 387 tgttcgaggacgtgcatagtgcgtccctcttcgacgagagcacggcggccttggacccgg 446 ||||||| ||||||||| | ||| | | |||||||||||||| ||||| |||||||||| Sbjct: 60357 tgttcgaagacgtgcatggcgcgacgcccttcgacgagagcatggcggatttggacccgg 60416 Query: 447 ag 448 || Sbjct: 60417 ag 60418 Score = 44.1 bits (22), Expect = 0.60 Identities = 43/50 (86%) Strand = Plus / Plus Query: 112 gctgtccatccccgcaagcaagcagccgttccttggccgcctgatgcgcg 161 ||||||| |||| || || |||||||||||||| ||||||| ||||||| Sbjct: 4828 gctgtccctcccggcgagtaagcagccgttcctccgccgcctcatgcgcg 4877 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 611 atcaagtgcaccgtgctggatctccccaaggtgatcg 647 |||||||||||||||||||| || || ||||||||| Sbjct: 16595 atcaagtgcaccgtgctggaccttcctcaggtgatcg 16559
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 135 bits (68), Expect = 2e-28 Identities = 215/264 (81%) Strand = Plus / Minus Query: 388 gttcgaggacgtgcatagtgcgtccctcttcgacgagagcacggcggccttggacccgga 447 ||||||||||||||| | ||||| || |||||||||||||| ||| |||||||||| Sbjct: 11494436 gttcgaggacgtgcacggcgcgtcgctgttcgacgagagcactgcgctgctggacccgga 11494377 Query: 448 gctcgacgcactggtcacagatggtctggccgcccacgacaaccttgggatcggcaccat 507 ||||||||| | |||| || || ||||| || ||||||||||| || ||||||||||| Sbjct: 11494376 gctcgacgccgtcgtcaacgaaggcctggcggcgcacgacaacctcggcatcggcaccat 11494317 Query: 508 catccgtgagtgccatgacctcttcaagggccttgagtctctaactgactgctgcggtgg 567 | | | ||||||| ||||||||| ||| || || || || ||||||||||| || Sbjct: 11494316 cctgagggagtgccgcgacctcttccgggggctccgttcgctgaccgactgctgcggcgg 11494257 Query: 568 cgatggaaccacggcgagggccatcaccaaggcccacccgcacatcaagtgcaccgtgct 627 ||| || || ||||||||||||||| |||||||| |||| || |||||||||| ||||| Sbjct: 11494256 cgacggcacgacggcgagggccatcgccaaggcctaccctcatgtcaagtgcactgtgct 11494197 Query: 628 ggatctccccaaggtgatcgacaa 651 ||| || ||||||||||||||||| Sbjct: 11494196 ggaccttcccaaggtgatcgacaa 11494173 Score = 115 bits (58), Expect = 2e-22 Identities = 112/130 (86%) Strand = Plus / Minus Query: 236 ctgtcccgcatcctggtggacggcgtcgtcgcggacgagcaccacagccagacgtccttc 295 |||||||||||||| || || ||||||||||| ||||||||||||||||||||||||||| Sbjct: 11494588 ctgtcccgcatcctcgtcgatggcgtcgtcgccgacgagcaccacagccagacgtccttc 11494529 Query: 296 gtgctggctgggacgtcccggcactacatggaagctgcgctgggcatggctgactggttc 355 ||||| || | |||||| ||||||||| | || || |||||||| ||| || |||||| Sbjct: 11494528 gtgctcgccgcgacgtcgcggcactacctcgaggcggcgctggggctggacgagtggttc 11494469 Query: 356 aagaaggacg 365 | |||||||| Sbjct: 11494468 aggaaggacg 11494459 Score = 91.7 bits (46), Expect = 3e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 8 tactacctcacgtccatggggctccgctgcgccgtcaagctcggcatcccgacggcgatc 67 |||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||| Sbjct: 11550509 tactacctcacgtccatgggcctccgctgcgccgtcgagctcggcatcccgaccacgatc 11550450 Query: 68 ca 69 || Sbjct: 11550449 ca 11550448 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 236 ctgtcccgcatcctggtggacggcgtcgtcgcggacgagcaccacagccagacgtccttc 295 ||||||||||||||||| |||||||||||||| ||||||||||| ||||||| || |||| Sbjct: 11550287 ctgtcccgcatcctggttgacggcgtcgtcgccgacgagcaccatagccagaggtgcttc 11550228 Query: 296 gtgctgg 302 || |||| Sbjct: 11550227 gtcctgg 11550221 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Minus Query: 10 ctacctcacgtccatggggctccgctgcgccgtcaagctcggcatcccgacggcgatcca 69 |||||||||| |||||| |||||||||||||| ||||||||||||||| || || ||||| Sbjct: 7138957 ctacctcacggccatggcgctccgctgcgccgccaagctcggcatccccaccgccatcca 7138898 Query: 70 caacctcggcgg 81 | ||||||||| Sbjct: 7138897 ccgcctcggcgg 7138886 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 8 tactacctcacgtccatggggctccgctgcgccgtcaagctcggcatccc 57 ||||||||||| ||||||| |||||| ||||||||||||||||||||||| Sbjct: 11482324 tactacctcacctccatggcgctccggtgcgccgtcaagctcggcatccc 11482373 Score = 75.8 bits (38), Expect = 2e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 578 acggcgagggccatcaccaaggcccacccgcacatcaagtgcaccgtgctggatctcccc 637 ||||||||||||||| || ||| |||||||||||||||||| |||||||| ||||| Sbjct: 7138365 acggcgagggccatcgccgcggcattcccgcacatcaagtgcacggtgctggacctcccg 7138306 Query: 638 aaggtgatcgacaa 651 |||||||||||||| Sbjct: 7138305 aaggtgatcgacaa 7138292 Score = 69.9 bits (35), Expect = 1e-08 Identities = 50/55 (90%) Strand = Plus / Minus Query: 576 ccacggcgagggccatcaccaaggcccacccgcacatcaagtgcaccgtgctgga 630 ||||||||||||||||| |||||| ||||||||||||||||||| |||||||| Sbjct: 11549947 ccacggcgagggccatcgtcaaggcgtacccgcacatcaagtgcacggtgctgga 11549893 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 8 tactacctcacgtccatggggctccgctgcgccgtcaagctcggcatcccgacggcgatc 67 ||||||||||| |||| ||| |||||||||||| ||||||| |||||||| || || ||| Sbjct: 11494813 tactacctcacctccacgggactccgctgcgccatcaagctgggcatccccaccgccatc 11494754 Query: 68 cacaacctcggcgg 81 ||| ||||||||| Sbjct: 11494753 caccgcctcggcgg 11494740 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 15 tcacgtccatggggctccgctgcgccgtcaagctcggcatcccgacggcgatccac 70 |||||||||||| | ||| ||||||||||||||||||||||| || || |||||| Sbjct: 11331606 tcacgtccatggcgttccagtgcgccgtcaagctcggcatccccaccgccatccac 11331551 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 387 tgttcgaggacgtgcatagtgcgtccctcttcgacgagagcacggcggccttggacccgg 446 ||||||| ||||||||| | ||| | | |||||||||||||| ||||| |||||||||| Sbjct: 11439180 tgttcgaagacgtgcatggcgcgacgcccttcgacgagagcatggcggatttggacccgg 11439121 Query: 447 ag 448 || Sbjct: 11439120 ag 11439119 Score = 48.1 bits (24), Expect = 0.038 Identities = 33/36 (91%) Strand = Plus / Minus Query: 35 tgcgccgtcaagctcggcatcccgacggcgatccac 70 ||||||||||||||||||||||| || || |||||| Sbjct: 11355234 tgcgccgtcaagctcggcatccccaccgccatccac 11355199 Score = 46.1 bits (23), Expect = 0.15 Identities = 92/115 (80%) Strand = Plus / Minus Query: 10 ctacctcacgtccatggggctccgctgcgccgtcaagctcggcatcccgacggcgatcca 69 ||||||||| |||||| ||||| ||||||||| | ||||||||||| || || ||||| Sbjct: 11303003 ctacctcacctccatgactctccggtgcgccgtccacctcggcatccccaccgccatcca 11302944 Query: 70 caacctcggcggggtctcctcgctggctgacctggcggccgcgctgtccatcccc 124 | || |||||| | | |||||||| | ||||| | ||||||||||| ||||| Sbjct: 11302943 ccgccacggcggcgccgcctcgctgcccgacctcgtcaccgcgctgtccctcccc 11302889 Score = 44.1 bits (22), Expect = 0.60 Identities = 31/34 (91%) Strand = Plus / Minus Query: 604 cccgcacatcaagtgcaccgtgctggatctcccc 637 |||| ||||||||||||||||| |||| |||||| Sbjct: 19030511 cccggacatcaagtgcaccgtgatggacctcccc 19030478 Score = 44.1 bits (22), Expect = 0.60 Identities = 43/50 (86%) Strand = Plus / Minus Query: 112 gctgtccatccccgcaagcaagcagccgttccttggccgcctgatgcgcg 161 ||||||| |||| || || |||||||||||||| ||||||| ||||||| Sbjct: 11494709 gctgtccctcccggcgagtaagcagccgttcctccgccgcctcatgcgcg 11494660 Score = 44.1 bits (22), Expect = 0.60 Identities = 55/66 (83%) Strand = Plus / Minus Query: 554 gactgctgcggtggcgatggaaccacggcgagggccatcaccaaggcccacccgcacatc 613 |||||| |||| ||||| || || |||||||||||||| || ||||| ||||||| || Sbjct: 11302456 gactgcggcggcggcgacggcacggcggcgagggccatcgccgaggccttcccgcacgtc 11302397 Query: 614 aagtgc 619 |||||| Sbjct: 11302396 aagtgc 11302391 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 611 atcaagtgcaccgtgctggatctccccaaggtgatcg 647 |||||||||||||||||||| || || ||||||||| Sbjct: 11482942 atcaagtgcaccgtgctggaccttcctcaggtgatcg 11482978 Score = 40.1 bits (20), Expect = 9.3 Identities = 44/52 (84%) Strand = Plus / Minus Query: 579 cggcgagggccatcaccaaggcccacccgcacatcaagtgcaccgtgctgga 630 |||||| ||||||| | ||||| ||| |||||||||| |||||||||||| Sbjct: 11354666 cggcgaaggccatcgtcgaggccttcccacacatcaagttcaccgtgctgga 11354615 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 611 atcaagtgcaccgtgctgga 630 |||||||||||||||||||| Sbjct: 11330995 atcaagtgcaccgtgctgga 11330976 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 236 ctgtcccgcatcctggtggacggcgtcg 263 |||||||||||||| || |||||||||| Sbjct: 7138731 ctgtcccgcatcctcgtcgacggcgtcg 7138704
>dbj|AK106179.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-C11, full insert sequence Length = 1362 Score = 135 bits (68), Expect = 2e-28 Identities = 215/264 (81%) Strand = Plus / Plus Query: 388 gttcgaggacgtgcatagtgcgtccctcttcgacgagagcacggcggccttggacccgga 447 ||||||||||||||| | ||||| || |||||||||||||| ||| |||||||||| Sbjct: 512 gttcgaggacgtgcacggcgcgtcgctgttcgacgagagcactgcgctgctggacccgga 571 Query: 448 gctcgacgcactggtcacagatggtctggccgcccacgacaaccttgggatcggcaccat 507 ||||||||| | |||| || || ||||| || ||||||||||| || ||||||||||| Sbjct: 572 gctcgacgccgtcgtcaacgaaggcctggcggcgcacgacaacctcggcatcggcaccat 631 Query: 508 catccgtgagtgccatgacctcttcaagggccttgagtctctaactgactgctgcggtgg 567 | | | ||||||| ||||||||| ||| || || || || ||||||||||| || Sbjct: 632 cctgagggagtgccgcgacctcttccgggggctccgttcgctgaccgactgctgcggcgg 691 Query: 568 cgatggaaccacggcgagggccatcaccaaggcccacccgcacatcaagtgcaccgtgct 627 ||| || || ||||||||||||||| |||||||| |||| || |||||||||| ||||| Sbjct: 692 cgacggcacgacggcgagggccatcgccaaggcctaccctcatgtcaagtgcactgtgct 751 Query: 628 ggatctccccaaggtgatcgacaa 651 ||| || ||||||||||||||||| Sbjct: 752 ggaccttcccaaggtgatcgacaa 775 Score = 115 bits (58), Expect = 2e-22 Identities = 112/130 (86%) Strand = Plus / Plus Query: 236 ctgtcccgcatcctggtggacggcgtcgtcgcggacgagcaccacagccagacgtccttc 295 |||||||||||||| || || ||||||||||| ||||||||||||||||||||||||||| Sbjct: 360 ctgtcccgcatcctcgtcgatggcgtcgtcgccgacgagcaccacagccagacgtccttc 419 Query: 296 gtgctggctgggacgtcccggcactacatggaagctgcgctgggcatggctgactggttc 355 ||||| || | |||||| ||||||||| | || || |||||||| ||| || |||||| Sbjct: 420 gtgctcgccgcgacgtcgcggcactacctcgaggcggcgctggggctggacgagtggttc 479 Query: 356 aagaaggacg 365 | |||||||| Sbjct: 480 aggaaggacg 489 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 8 tactacctcacgtccatggggctccgctgcgccgtcaagctcggcatcccgacggcgatc 67 ||||||||||| |||| ||| |||||||||||| ||||||| |||||||| || || ||| Sbjct: 135 tactacctcacctccacgggactccgctgcgccatcaagctgggcatccccaccgccatc 194 Query: 68 cacaacctcggcgg 81 ||| ||||||||| Sbjct: 195 caccgcctcggcgg 208 Score = 44.1 bits (22), Expect = 0.60 Identities = 43/50 (86%) Strand = Plus / Plus Query: 112 gctgtccatccccgcaagcaagcagccgttccttggccgcctgatgcgcg 161 ||||||| |||| || || |||||||||||||| ||||||| ||||||| Sbjct: 239 gctgtccctcccggcgagtaagcagccgttcctccgccgcctcatgcgcg 288
>dbj|AK059770.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H05, full insert sequence Length = 1264 Score = 135 bits (68), Expect = 2e-28 Identities = 215/264 (81%) Strand = Plus / Plus Query: 388 gttcgaggacgtgcatagtgcgtccctcttcgacgagagcacggcggccttggacccgga 447 ||||||||||||||| | ||||| || |||||||||||||| ||| |||||||||| Sbjct: 517 gttcgaggacgtgcacggcgcgtcgctgttcgacgagagcactgcgctgctggacccgga 576 Query: 448 gctcgacgcactggtcacagatggtctggccgcccacgacaaccttgggatcggcaccat 507 ||||||||| | |||| || || ||||| || ||||||||||| || ||||||||||| Sbjct: 577 gctcgacgccgtcgtcaacgaaggcctggcggcgcacgacaacctcggcatcggcaccat 636 Query: 508 catccgtgagtgccatgacctcttcaagggccttgagtctctaactgactgctgcggtgg 567 | | | ||||||| ||||||||| ||| || || || || ||||||||||| || Sbjct: 637 cctgagggagtgccgcgacctcttccgggggctccgttcgctgaccgactgctgcggcgg 696 Query: 568 cgatggaaccacggcgagggccatcaccaaggcccacccgcacatcaagtgcaccgtgct 627 ||| || || ||||||||||||||| |||||||| |||| || |||||||||| ||||| Sbjct: 697 cgacggcacgacggcgagggccatcgccaaggcctaccctcatgtcaagtgcactgtgct 756 Query: 628 ggatctccccaaggtgatcgacaa 651 ||| || ||||||||||||||||| Sbjct: 757 ggaccttcccaaggtgatcgacaa 780 Score = 115 bits (58), Expect = 2e-22 Identities = 112/130 (86%) Strand = Plus / Plus Query: 236 ctgtcccgcatcctggtggacggcgtcgtcgcggacgagcaccacagccagacgtccttc 295 |||||||||||||| || || ||||||||||| ||||||||||||||||||||||||||| Sbjct: 365 ctgtcccgcatcctcgtcgatggcgtcgtcgccgacgagcaccacagccagacgtccttc 424 Query: 296 gtgctggctgggacgtcccggcactacatggaagctgcgctgggcatggctgactggttc 355 ||||| || | |||||| ||||||||| | || || |||||||| ||| || |||||| Sbjct: 425 gtgctcgccgcgacgtcgcggcactacctcgaggcggcgctggggctggacgagtggttc 484 Query: 356 aagaaggacg 365 | |||||||| Sbjct: 485 aggaaggacg 494 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 8 tactacctcacgtccatggggctccgctgcgccgtcaagctcggcatcccgacggcgatc 67 ||||||||||| |||| ||| |||||||||||| ||||||| |||||||| || || ||| Sbjct: 140 tactacctcacctccacgggactccgctgcgccatcaagctgggcatccccaccgccatc 199 Query: 68 cacaacctcggcgg 81 ||| ||||||||| Sbjct: 200 caccgcctcggcgg 213 Score = 44.1 bits (22), Expect = 0.60 Identities = 43/50 (86%) Strand = Plus / Plus Query: 112 gctgtccatccccgcaagcaagcagccgttccttggccgcctgatgcgcg 161 ||||||| |||| || || |||||||||||||| ||||||| ||||||| Sbjct: 244 gctgtccctcccggcgagtaagcagccgttcctccgccgcctcatgcgcg 293
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 135 bits (68), Expect = 2e-28 Identities = 215/264 (81%) Strand = Plus / Minus Query: 388 gttcgaggacgtgcatagtgcgtccctcttcgacgagagcacggcggccttggacccgga 447 ||||||||||||||| | ||||| || |||||||||||||| ||| |||||||||| Sbjct: 11573625 gttcgaggacgtgcacggcgcgtcgctgttcgacgagagcactgcgctgctggacccgga 11573566 Query: 448 gctcgacgcactggtcacagatggtctggccgcccacgacaaccttgggatcggcaccat 507 ||||||||| | |||| || || ||||| || ||||||||||| || ||||||||||| Sbjct: 11573565 gctcgacgccgtcgtcaacgaaggcctggcggcgcacgacaacctcggcatcggcaccat 11573506 Query: 508 catccgtgagtgccatgacctcttcaagggccttgagtctctaactgactgctgcggtgg 567 | | | ||||||| ||||||||| ||| || || || || ||||||||||| || Sbjct: 11573505 cctgagggagtgccgcgacctcttccgggggctccgttcgctgaccgactgctgcggcgg 11573446 Query: 568 cgatggaaccacggcgagggccatcaccaaggcccacccgcacatcaagtgcaccgtgct 627 ||| || || ||||||||||||||| |||||||| |||| || |||||||||| ||||| Sbjct: 11573445 cgacggcacgacggcgagggccatcgccaaggcctaccctcatgtcaagtgcactgtgct 11573386 Query: 628 ggatctccccaaggtgatcgacaa 651 ||| || ||||||||||||||||| Sbjct: 11573385 ggaccttcccaaggtgatcgacaa 11573362 Score = 115 bits (58), Expect = 2e-22 Identities = 112/130 (86%) Strand = Plus / Minus Query: 236 ctgtcccgcatcctggtggacggcgtcgtcgcggacgagcaccacagccagacgtccttc 295 |||||||||||||| || || ||||||||||| ||||||||||||||||||||||||||| Sbjct: 11573777 ctgtcccgcatcctcgtcgatggcgtcgtcgccgacgagcaccacagccagacgtccttc 11573718 Query: 296 gtgctggctgggacgtcccggcactacatggaagctgcgctgggcatggctgactggttc 355 ||||| || | |||||| ||||||||| | || || |||||||| ||| || |||||| Sbjct: 11573717 gtgctcgccgcgacgtcgcggcactacctcgaggcggcgctggggctggacgagtggttc 11573658 Query: 356 aagaaggacg 365 | |||||||| Sbjct: 11573657 aggaaggacg 11573648 Score = 91.7 bits (46), Expect = 3e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 8 tactacctcacgtccatggggctccgctgcgccgtcaagctcggcatcccgacggcgatc 67 |||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||| Sbjct: 11629698 tactacctcacgtccatgggcctccgctgcgccgtcgagctcggcatcccgaccacgatc 11629639 Query: 68 ca 69 || Sbjct: 11629638 ca 11629637 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 236 ctgtcccgcatcctggtggacggcgtcgtcgcggacgagcaccacagccagacgtccttc 295 ||||||||||||||||| |||||||||||||| ||||||||||| ||||||| || |||| Sbjct: 11629476 ctgtcccgcatcctggttgacggcgtcgtcgccgacgagcaccatagccagaggtgcttc 11629417 Query: 296 gtgctgg 302 || |||| Sbjct: 11629416 gtcctgg 11629410 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Minus Query: 10 ctacctcacgtccatggggctccgctgcgccgtcaagctcggcatcccgacggcgatcca 69 |||||||||| |||||| |||||||||||||| ||||||||||||||| || || ||||| Sbjct: 7204928 ctacctcacggccatggcgctccgctgcgccgccaagctcggcatccccaccgccatcca 7204869 Query: 70 caacctcggcgg 81 | ||||||||| Sbjct: 7204868 ccgcctcggcgg 7204857 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 8 tactacctcacgtccatggggctccgctgcgccgtcaagctcggcatccc 57 ||||||||||| ||||||| |||||| ||||||||||||||||||||||| Sbjct: 11561513 tactacctcacctccatggcgctccggtgcgccgtcaagctcggcatccc 11561562 Score = 75.8 bits (38), Expect = 2e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 578 acggcgagggccatcaccaaggcccacccgcacatcaagtgcaccgtgctggatctcccc 637 ||||||||||||||| || ||| |||||||||||||||||| |||||||| ||||| Sbjct: 7204336 acggcgagggccatcgccgcggcattcccgcacatcaagtgcacggtgctggacctcccg 7204277 Query: 638 aaggtgatcgacaa 651 |||||||||||||| Sbjct: 7204276 aaggtgatcgacaa 7204263 Score = 69.9 bits (35), Expect = 1e-08 Identities = 50/55 (90%) Strand = Plus / Minus Query: 576 ccacggcgagggccatcaccaaggcccacccgcacatcaagtgcaccgtgctgga 630 ||||||||||||||||| |||||| ||||||||||||||||||| |||||||| Sbjct: 11629136 ccacggcgagggccatcgtcaaggcgtacccgcacatcaagtgcacggtgctgga 11629082 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 8 tactacctcacgtccatggggctccgctgcgccgtcaagctcggcatcccgacggcgatc 67 ||||||||||| |||| ||| |||||||||||| ||||||| |||||||| || || ||| Sbjct: 11574002 tactacctcacctccacgggactccgctgcgccatcaagctgggcatccccaccgccatc 11573943 Query: 68 cacaacctcggcgg 81 ||| ||||||||| Sbjct: 11573942 caccgcctcggcgg 11573929 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 15 tcacgtccatggggctccgctgcgccgtcaagctcggcatcccgacggcgatccac 70 |||||||||||| | ||| ||||||||||||||||||||||| || || |||||| Sbjct: 11410795 tcacgtccatggcgttccagtgcgccgtcaagctcggcatccccaccgccatccac 11410740 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 387 tgttcgaggacgtgcatagtgcgtccctcttcgacgagagcacggcggccttggacccgg 446 ||||||| ||||||||| | ||| | | |||||||||||||| ||||| |||||||||| Sbjct: 11518369 tgttcgaagacgtgcatggcgcgacgcccttcgacgagagcatggcggatttggacccgg 11518310 Query: 447 ag 448 || Sbjct: 11518309 ag 11518308 Score = 48.1 bits (24), Expect = 0.038 Identities = 33/36 (91%) Strand = Plus / Minus Query: 35 tgcgccgtcaagctcggcatcccgacggcgatccac 70 ||||||||||||||||||||||| || || |||||| Sbjct: 11434423 tgcgccgtcaagctcggcatccccaccgccatccac 11434388 Score = 46.1 bits (23), Expect = 0.15 Identities = 92/115 (80%) Strand = Plus / Minus Query: 10 ctacctcacgtccatggggctccgctgcgccgtcaagctcggcatcccgacggcgatcca 69 ||||||||| |||||| ||||| ||||||||| | ||||||||||| || || ||||| Sbjct: 11382192 ctacctcacctccatgactctccggtgcgccgtccacctcggcatccccaccgccatcca 11382133 Query: 70 caacctcggcggggtctcctcgctggctgacctggcggccgcgctgtccatcccc 124 | || |||||| | | |||||||| | ||||| | ||||||||||| ||||| Sbjct: 11382132 ccgccacggcggcgccgcctcgctgcccgacctcgtcaccgcgctgtccctcccc 11382078 Score = 44.1 bits (22), Expect = 0.60 Identities = 31/34 (91%) Strand = Plus / Minus Query: 604 cccgcacatcaagtgcaccgtgctggatctcccc 637 |||| ||||||||||||||||| |||| |||||| Sbjct: 19189160 cccggacatcaagtgcaccgtgatggacctcccc 19189127 Score = 44.1 bits (22), Expect = 0.60 Identities = 43/50 (86%) Strand = Plus / Minus Query: 112 gctgtccatccccgcaagcaagcagccgttccttggccgcctgatgcgcg 161 ||||||| |||| || || |||||||||||||| ||||||| ||||||| Sbjct: 11573898 gctgtccctcccggcgagtaagcagccgttcctccgccgcctcatgcgcg 11573849 Score = 44.1 bits (22), Expect = 0.60 Identities = 55/66 (83%) Strand = Plus / Minus Query: 554 gactgctgcggtggcgatggaaccacggcgagggccatcaccaaggcccacccgcacatc 613 |||||| |||| ||||| || || |||||||||||||| || ||||| ||||||| || Sbjct: 11381645 gactgcggcggcggcgacggcacggcggcgagggccatcgccgaggccttcccgcacgtc 11381586 Query: 614 aagtgc 619 |||||| Sbjct: 11381585 aagtgc 11381580 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 611 atcaagtgcaccgtgctggatctccccaaggtgatcg 647 |||||||||||||||||||| || || ||||||||| Sbjct: 11562131 atcaagtgcaccgtgctggaccttcctcaggtgatcg 11562167 Score = 40.1 bits (20), Expect = 9.3 Identities = 44/52 (84%) Strand = Plus / Minus Query: 579 cggcgagggccatcaccaaggcccacccgcacatcaagtgcaccgtgctgga 630 |||||| ||||||| | ||||| ||| |||||||||| |||||||||||| Sbjct: 11433855 cggcgaaggccatcgtcgaggccttcccacacatcaagttcaccgtgctgga 11433804 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 611 atcaagtgcaccgtgctgga 630 |||||||||||||||||||| Sbjct: 11410184 atcaagtgcaccgtgctgga 11410165 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 236 ctgtcccgcatcctggtggacggcgtcg 263 |||||||||||||| || |||||||||| Sbjct: 7204702 ctgtcccgcatcctcgtcgacggcgtcg 7204675
>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0097K08 map C827S, complete sequence Length = 137870 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 10 ctacctcacgtccatggggctccgctgcgccgtcaagctcggcatcccgacggcgatcca 69 |||||||||| |||||| |||||||||||||| ||||||||||||||| || || ||||| Sbjct: 43598 ctacctcacggccatggcgctccgctgcgccgccaagctcggcatccccaccgccatcca 43657 Query: 70 caacctcggcgg 81 | ||||||||| Sbjct: 43658 ccgcctcggcgg 43669 Score = 75.8 bits (38), Expect = 2e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 578 acggcgagggccatcaccaaggcccacccgcacatcaagtgcaccgtgctggatctcccc 637 ||||||||||||||| || ||| |||||||||||||||||| |||||||| ||||| Sbjct: 44190 acggcgagggccatcgccgcggcattcccgcacatcaagtgcacggtgctggacctcccg 44249 Query: 638 aaggtgatcgacaa 651 |||||||||||||| Sbjct: 44250 aaggtgatcgacaa 44263 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 236 ctgtcccgcatcctggtggacggcgtcg 263 |||||||||||||| || |||||||||| Sbjct: 43824 ctgtcccgcatcctcgtcgacggcgtcg 43851
>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0026P08 map near C827S, complete sequence Length = 148676 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Minus Query: 10 ctacctcacgtccatggggctccgctgcgccgtcaagctcggcatcccgacggcgatcca 69 |||||||||| |||||| |||||||||||||| ||||||||||||||| || || ||||| Sbjct: 52177 ctacctcacggccatggcgctccgctgcgccgccaagctcggcatccccaccgccatcca 52118 Query: 70 caacctcggcgg 81 | ||||||||| Sbjct: 52117 ccgcctcggcgg 52106 Score = 75.8 bits (38), Expect = 2e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 578 acggcgagggccatcaccaaggcccacccgcacatcaagtgcaccgtgctggatctcccc 637 ||||||||||||||| || ||| |||||||||||||||||| |||||||| ||||| Sbjct: 51585 acggcgagggccatcgccgcggcattcccgcacatcaagtgcacggtgctggacctcccg 51526 Query: 638 aaggtgatcgacaa 651 |||||||||||||| Sbjct: 51525 aaggtgatcgacaa 51512 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 236 ctgtcccgcatcctggtggacggcgtcg 263 |||||||||||||| || |||||||||| Sbjct: 51951 ctgtcccgcatcctcgtcgacggcgtcg 51924
>dbj|AK109384.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-A06, full insert sequence Length = 1300 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 8 tactacctcacgtccatggggctccgctgcgccgtcaagctcggcatccc 57 ||||||||||| ||||||| |||||| ||||||||||||||||||||||| Sbjct: 151 tactacctcacctccatggcgctccggtgcgccgtcaagctcggcatccc 200 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 611 atcaagtgcaccgtgctggatctccccaaggtgatcg 647 |||||||||||||||||||| || || ||||||||| Sbjct: 769 atcaagtgcaccgtgctggaccttcctcaggtgatcg 805
>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0015P05 map C53961S, complete sequence Length = 175121 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 15 tcacgtccatggggctccgctgcgccgtcaagctcggcatcccgacggcgatccac 70 |||||||||||| | ||| ||||||||||||||||||||||| || || |||||| Sbjct: 117964 tcacgtccatggcgttccagtgcgccgtcaagctcggcatccccaccgccatccac 117909 Score = 48.1 bits (24), Expect = 0.038 Identities = 33/36 (91%) Strand = Plus / Minus Query: 35 tgcgccgtcaagctcggcatcccgacggcgatccac 70 ||||||||||||||||||||||| || || |||||| Sbjct: 141592 tgcgccgtcaagctcggcatccccaccgccatccac 141557 Score = 46.1 bits (23), Expect = 0.15 Identities = 92/115 (80%) Strand = Plus / Minus Query: 10 ctacctcacgtccatggggctccgctgcgccgtcaagctcggcatcccgacggcgatcca 69 ||||||||| |||||| ||||| ||||||||| | ||||||||||| || || ||||| Sbjct: 89361 ctacctcacctccatgactctccggtgcgccgtccacctcggcatccccaccgccatcca 89302 Query: 70 caacctcggcggggtctcctcgctggctgacctggcggccgcgctgtccatcccc 124 | || |||||| | | |||||||| | ||||| | ||||||||||| ||||| Sbjct: 89301 ccgccacggcggcgccgcctcgctgcccgacctcgtcaccgcgctgtccctcccc 89247 Score = 44.1 bits (22), Expect = 0.60 Identities = 55/66 (83%) Strand = Plus / Minus Query: 554 gactgctgcggtggcgatggaaccacggcgagggccatcaccaaggcccacccgcacatc 613 |||||| |||| ||||| || || |||||||||||||| || ||||| ||||||| || Sbjct: 88814 gactgcggcggcggcgacggcacggcggcgagggccatcgccgaggccttcccgcacgtc 88755 Query: 614 aagtgc 619 |||||| Sbjct: 88754 aagtgc 88749 Score = 40.1 bits (20), Expect = 9.3 Identities = 44/52 (84%) Strand = Plus / Minus Query: 579 cggcgagggccatcaccaaggcccacccgcacatcaagtgcaccgtgctgga 630 |||||| ||||||| | ||||| ||| |||||||||| |||||||||||| Sbjct: 141024 cggcgaaggccatcgtcgaggccttcccacacatcaagttcaccgtgctgga 140973 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 611 atcaagtgcaccgtgctgga 630 |||||||||||||||||||| Sbjct: 117353 atcaagtgcaccgtgctgga 117334
>dbj|AK061247.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-E05, full insert sequence Length = 1262 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 15 tcacgtccatggggctccgctgcgccgtcaagctcggcatcccgacggcgatccac 70 |||||||||||| | ||| ||||||||||||||||||||||| || || |||||| Sbjct: 141 tcacgtccatggcgttccagtgcgccgtcaagctcggcatccccaccgccatccac 196 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 611 atcaagtgcaccgtgctgga 630 |||||||||||||||||||| Sbjct: 752 atcaagtgcaccgtgctgga 771
>gb|BT009571.1| Triticum aestivum clone wre1n.pk0021.e3:fis, full insert mRNA sequence Length = 770 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 554 gactgctgcggtggcgatggaaccacggcgagggccatcaccaaggcccacccgcacatc 613 |||||||| ||||| ||||| || || || ||||||||| ||||||| |||||| ||| Sbjct: 36 gactgctgtggtggtgatgggacgaccgcaagggccatcgtcaaggccttcccgcatatc 95 Query: 614 aagtgcaccgtgctggatctccccaaggtgatcga 648 ||||||| ||| |||| || || ||||||||||| Sbjct: 96 aagtgcaatgtgttggaccttccaaaggtgatcga 130
>ref|NM_191262.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1137 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 29 ctccgctgcgccgtcaagctcggcatccc 57 ||||||||||||||| ||||||||||||| Sbjct: 100 ctccgctgcgccgtcgagctcggcatccc 128
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 29 ctccgctgcgccgtcaagctcggcatccc 57 ||||||||||||||| ||||||||||||| Sbjct: 31604095 ctccgctgcgccgtcgagctcggcatccc 31604123
>dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0503C12 Length = 147180 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 29 ctccgctgcgccgtcaagctcggcatccc 57 ||||||||||||||| ||||||||||||| Sbjct: 17827 ctccgctgcgccgtcgagctcggcatccc 17855
>dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0435B05 Length = 150997 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 29 ctccgctgcgccgtcaagctcggcatccc 57 ||||||||||||||| ||||||||||||| Sbjct: 117118 ctccgctgcgccgtcgagctcggcatccc 117146
>gb|AY107519.1| Zea mays PCO078033 mRNA sequence Length = 1299 Score = 48.1 bits (24), Expect = 0.038 Identities = 110/136 (80%), Gaps = 2/136 (1%) Strand = Plus / Plus Query: 52 catcccgacggcgatccacaacctcggcggggtct-cctcgctggctgacctggcggccg 110 ||||||||| || ||||||||||| ||| |||||| || ||||| | ||||| | ||||| Sbjct: 161 catcccgaccgccatccacaacctaggc-gggtctgccacgctgccggacctcgtggccg 219 Query: 111 cgctgtccatccccgcaagcaagcagccgttccttggccgcctgatgcgcgcgctggtca 170 |||||||| | || || ||||| |||||||| || ||| ||||||| |||||||| Sbjct: 220 cgctgtccctgccagcggccaagctcccgttcctcgggcgcgtgatgcggctgctggtca 279 Query: 171 cctcaggcgtcttcgc 186 | || ||||||||||| Sbjct: 280 cgtcgggcgtcttcgc 295
>ref|XM_477999.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1083 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 604 cccgcacatcaagtgcaccgtgctgga 630 |||||| |||||||||||||||||||| Sbjct: 642 cccgcatatcaagtgcaccgtgctgga 668 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 155 atgcgcgcgctggtcacctcaggcgtcttcgc 186 ||||||| ||||||| |||| ||||||||||| Sbjct: 205 atgcgcgtgctggtcgcctcgggcgtcttcgc 236
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 604 cccgcacatcaagtgcaccgtgctgga 630 |||||| |||||||||||||||||||| Sbjct: 16264616 cccgcatatcaagtgcaccgtgctgga 16264590 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 604 cccgcacatcaagtgcaccgtgctgga 630 |||||| |||||||||||||||||||| Sbjct: 16220101 cccgcatatcaagtgcaccgtgctgga 16220127 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 155 atgcgcgcgctggtcacctcaggcgtcttcgc 186 ||||||| ||||||| |||| ||||||||||| Sbjct: 16295699 atgcgcgtgctggtcgcctcgggcgtcttcgc 16295668 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 155 atgcgcgcgctggtcacctcaggcgtcttcgc 186 ||||||| ||||||| |||| ||||||||||| Sbjct: 16265053 atgcgcgtgctggtcgcctcgggcgtcttcgc 16265022 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 155 atgcgcgcgctggtcacctcaggcgtcttcgc 186 ||||||| ||||||| |||| ||||||||||| Sbjct: 16219664 atgcgcgtgctggtcgcctcgggcgtcttcgc 16219695
>dbj|AP003916.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1634_H04 Length = 151699 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 604 cccgcacatcaagtgcaccgtgctgga 630 |||||| |||||||||||||||||||| Sbjct: 85054 cccgcatatcaagtgcaccgtgctgga 85028 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 604 cccgcacatcaagtgcaccgtgctgga 630 |||||| |||||||||||||||||||| Sbjct: 40539 cccgcatatcaagtgcaccgtgctgga 40565 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 155 atgcgcgcgctggtcacctcaggcgtcttcgc 186 ||||||| ||||||| |||| ||||||||||| Sbjct: 116137 atgcgcgtgctggtcgcctcgggcgtcttcgc 116106 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 155 atgcgcgcgctggtcacctcaggcgtcttcgc 186 ||||||| ||||||| |||| ||||||||||| Sbjct: 85491 atgcgcgtgctggtcgcctcgggcgtcttcgc 85460 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 155 atgcgcgcgctggtcacctcaggcgtcttcgc 186 ||||||| ||||||| |||| ||||||||||| Sbjct: 40102 atgcgcgtgctggtcgcctcgggcgtcttcgc 40133
>ref|NM_187649.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2874 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 251 gtggacggcgtcgtcgcggacg 272 |||||||||||||||||||||| Sbjct: 312 gtggacggcgtcgtcgcggacg 333
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 44.1 bits (22), Expect = 0.60 Identities = 31/34 (91%) Strand = Plus / Minus Query: 604 cccgcacatcaagtgcaccgtgctggatctcccc 637 |||| ||||||||||||||||| |||| |||||| Sbjct: 133709 cccggacatcaagtgcaccgtgatggacctcccc 133676
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 251 gtggacggcgtcgtcgcggacg 272 |||||||||||||||||||||| Sbjct: 431057 gtggacggcgtcgtcgcggacg 431078
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007D07, complete sequence Length = 133930 Score = 44.1 bits (22), Expect = 0.60 Identities = 31/34 (91%) Strand = Plus / Minus Query: 604 cccgcacatcaagtgcaccgtgctggatctcccc 637 |||| ||||||||||||||||| |||| |||||| Sbjct: 33329 cccggacatcaagtgcaccgtgatggacctcccc 33296
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 251 gtggacggcgtcgtcgcggacg 272 |||||||||||||||||||||| Sbjct: 431055 gtggacggcgtcgtcgcggacg 431076
>gb|AC113930.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1384D03, complete sequence Length = 116214 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 251 gtggacggcgtcgtcgcggacg 272 |||||||||||||||||||||| Sbjct: 29517 gtggacggcgtcgtcgcggacg 29538
>ref|NM_194623.1| Oryza sativa (japonica cultivar-group) putative o-methyltransferase ZRP4 (OSJNBa0023I19.21), mRNA Length = 1101 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 609 acatcaagtgcaccgtgctggatct 633 ||||||||||||| ||||||||||| Sbjct: 674 acatcaagtgcactgtgctggatct 698
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 cggcgtcgtcgcggacgagca 276 ||||||||||||||||||||| Sbjct: 728957 cggcgtcgtcgcggacgagca 728977
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 609 acatcaagtgcaccgtgctggatct 633 ||||||||||||| ||||||||||| Sbjct: 1142785 acatcaagtgcactgtgctggatct 1142761
>gb|AC079179.5| Oryza sativa chromosome 10 clone OSJNBa0079B05, complete sequence Length = 145526 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 609 acatcaagtgcaccgtgctggatct 633 ||||||||||||| ||||||||||| Sbjct: 27023 acatcaagtgcactgtgctggatct 26999
>gb|AC079037.3| Oryza sativa chromosome 10 clone OSJNBa0023I19, complete sequence Length = 157450 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 609 acatcaagtgcaccgtgctggatct 633 ||||||||||||| ||||||||||| Sbjct: 140238 acatcaagtgcactgtgctggatct 140214
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 609 acatcaagtgcaccgtgctggatct 633 ||||||||||||| ||||||||||| Sbjct: 1142785 acatcaagtgcactgtgctggatct 1142761
>dbj|AK069308.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012K03, full insert sequence Length = 1483 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 609 acatcaagtgcaccgtgctggatct 633 ||||||||||||| ||||||||||| Sbjct: 710 acatcaagtgcactgtgctggatct 734
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 609 acatcaagtgcaccgtgctggatct 633 ||||||||||||| ||||||||||| Sbjct: 1142782 acatcaagtgcactgtgctggatct 1142758
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 gtcttcgccaacggcggcaag 199 ||||||||||||||||||||| Sbjct: 2577043 gtcttcgccaacggcggcaag 2577023
>gb|AY062000.1| Euglena sp. BAPS 2-2000 small subunit ribosomal RNA gene, partial sequence Length = 2299 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 gcatggctgactggttcaag 358 |||||||||||||||||||| Sbjct: 196 gcatggctgactggttcaag 177
>ref|XM_478005.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1026 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 155 atgcgcgcgctggtcacctcaggcgtcttcgc 186 ||||||| ||||||| |||| ||||||||||| Sbjct: 202 atgcgcgtgctggtcgcctcgggcgtcttcgc 233
>ref|NM_016307.3| Homo sapiens paired related homeobox 2 (PRRX2), mRNA Length = 1327 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 103 ggcggccgcgctgtccatccccgc 126 |||||||||||||||||| ||||| Sbjct: 245 ggcggccgcgctgtccatgcccgc 222
>gb|BC014645.1| Homo sapiens paired related homeobox 2, mRNA (cDNA clone MGC:19843 IMAGE:4553935), complete cds Length = 1327 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 103 ggcggccgcgctgtccatccccgc 126 |||||||||||||||||| ||||| Sbjct: 245 ggcggccgcgctgtccatgcccgc 222
>ref|XM_742998.1| Aspergillus fumigatus Af293 hypothetical protein (Afu5g02510) partial mRNA Length = 3276 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 cttcaagggccttgagtctc 548 |||||||||||||||||||| Sbjct: 1285 cttcaagggccttgagtctc 1266
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 ggcgatccacaacctcggcg 80 |||||||||||||||||||| Sbjct: 1672630 ggcgatccacaacctcggcg 1672611
>emb|CR974468.5| Pig DNA sequence from clone PigE-178B21 on chromosome 7, complete sequence Length = 120695 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 534 agggccttgagtctctaactgact 557 |||||||||||||||| ||||||| Sbjct: 45741 agggccttgagtctctcactgact 45764
>ref|XM_547101.2| PREDICTED: Canis familiaris similar to dynein, axonemal, heavy polypeptide 3 (LOC489981), mRNA Length = 12444 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cctggcggccgcgctgtcca 119 |||||||||||||||||||| Sbjct: 18 cctggcggccgcgctgtcca 37
>gb|AF494422.1| Oryza sativa (japonica cultivar-group) apetala2 domain-containing CBF1-like protein mRNA, complete cds Length = 717 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 250 ggtggacggcgtcgtcgcggacga 273 ||||||||||||||||| |||||| Sbjct: 498 ggtggacggcgtcgtcgaggacga 475
>gb|AY345233.1| Oryza sativa transcription factor RCBF3 mRNA, complete cds Length = 850 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 250 ggtggacggcgtcgtcgcggacga 273 ||||||||||||||||| |||||| Sbjct: 560 ggtggacggcgtcgtcgaggacga 537
>emb|AL590369.18| Human DNA sequence from clone RP11-483H20 on chromosome 9 Contains the 5' end of a novel gene (FLJ35803), the 3' end of the gene for AD-003 protein (AD-003), the ASB6 gene for ankyrin repeat and SOCS box-containing 6 (FLJ20548), two novel genes, the gene for paired related homeobox protein (PRX2) (PMX2, PRRX2), the 3' end of the PTGES gene for prostaglandin E synthase (PGES, PIG12, MGST-IV, MGST1L1, TP53I12, MGST1-L1) and six CpG islands, complete sequence Length = 125756 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 103 ggcggccgcgctgtccatccccgc 126 |||||||||||||||||| ||||| Sbjct: 50300 ggcggccgcgctgtccatgcccgc 50277
>emb|X15060.1|SGPHR Streptomyces griseus phr gene for photolyase (EC 4.1.99.3) Length = 2589 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 250 ggtggacggcgtcgtcgcggacga 273 |||||||||||||||| ||||||| Sbjct: 1215 ggtggacggcgtcgtcccggacga 1192
>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12 Length = 348171 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 cgttccttggccgcctgatgcgcg 161 ||||||| |||||||||||||||| Sbjct: 108241 cgttcctgggccgcctgatgcgcg 108264
>gb|AE005885.1| Caulobacter crescentus CB15 section 211 of 359 of the complete genome Length = 11024 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 aggcccacccgcacatcaag 616 |||||||||||||||||||| Sbjct: 3766 aggcccacccgcacatcaag 3785
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 ccactgtcccgcatcctggt 252 |||||||||||||||||||| Sbjct: 459216 ccactgtcccgcatcctggt 459197
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 acctggcggccgcgctgtcc 118 |||||||||||||||||||| Sbjct: 1760549 acctggcggccgcgctgtcc 1760568
>gb|DP000050.1| Felis catus target 126 genomic scaffold Length = 269350 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 ggaagctgcgctgggcatgg 344 |||||||||||||||||||| Sbjct: 103061 ggaagctgcgctgggcatgg 103080
>gb|AF283309.1|AF283309 Euglena gracilis 18S small subunit ribosomal RNA gene, partial sequence Length = 2241 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 gcatggctgactggttcaag 358 |||||||||||||||||||| Sbjct: 168 gcatggctgactggttcaag 149
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 ggcgtcttcgccaacggcgg 195 |||||||||||||||||||| Sbjct: 218456 ggcgtcttcgccaacggcgg 218437
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 250 ggtggacggcgtcgtcgcggacga 273 ||||||||||||||||| |||||| Sbjct: 20103263 ggtggacggcgtcgtcgaggacga 20103286
>gb|AF061970.1|AF061970 Homo sapiens paired related homeobox protein (PRX2) mRNA, complete cds Length = 1110 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 103 ggcggccgcgctgtccatccccgc 126 |||||||||||||||||| ||||| Sbjct: 48 ggcggccgcgctgtccatgcccgc 25
>gb|AF300970.1| Oryza sativa DRE-binding protein 1A mRNA, complete cds Length = 895 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 250 ggtggacggcgtcgtcgcggacga 273 ||||||||||||||||| |||||| Sbjct: 564 ggtggacggcgtcgtcgaggacga 541
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 448 gctcgacgcactggtcacag 467 |||||||||||||||||||| Sbjct: 5022759 gctcgacgcactggtcacag 5022740
>dbj|AP006859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, fosmid clone:OSJNOa273B05 Length = 41326 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 250 ggtggacggcgtcgtcgcggacga 273 ||||||||||||||||| |||||| Sbjct: 38189 ggtggacggcgtcgtcgaggacga 38212
>dbj|AP005188.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0473C09 Length = 141066 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 155 atgcgcgcgctggtcacctcaggcgtcttcgc 186 ||||||| ||||||| |||| ||||||||||| Sbjct: 1755 atgcgcgtgctggtcgcctcgggcgtcttcgc 1724
>dbj|AK105599.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-A04, full insert sequence Length = 955 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 250 ggtggacggcgtcgtcgcggacga 273 ||||||||||||||||| |||||| Sbjct: 612 ggtggacggcgtcgtcgaggacga 589
>dbj|AK071519.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099L23, full insert sequence Length = 909 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 250 ggtggacggcgtcgtcgcggacga 273 ||||||||||||||||| |||||| Sbjct: 578 ggtggacggcgtcgtcgaggacga 555 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,901,464 Number of Sequences: 3902068 Number of extensions: 3901464 Number of successful extensions: 67491 Number of sequences better than 10.0: 63 Number of HSP's better than 10.0 without gapping: 66 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 66334 Number of HSP's gapped (non-prelim): 1141 length of query: 683 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 660 effective length of database: 17,143,297,704 effective search space: 11314576484640 effective search space used: 11314576484640 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
