ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags31d12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SDK_CAEEL (Q9N3X8) Protein sidekick homolog precursor (Neuronal ... 28 8.6
2FRU_DROME (Q8IN81) Sex determination protein fruitless 28 8.6

>SDK_CAEEL (Q9N3X8) Protein sidekick homolog precursor (Neuronal IgCAM protein|
            4)
          Length = 2325

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -2

Query: 119  NRGPAHREEETRRKVHIIHGKDGGGAPPAYITP 21
            N GP H   E  +K+  + G+D      AY+TP
Sbjct: 2137 NSGPPHTSVEAMQKLSALVGRDIRSQNTAYVTP 2169



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>FRU_DROME (Q8IN81) Sex determination protein fruitless|
          Length = 955

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -2

Query: 188 NDGNHNQEEK*EXRNRTEPRCRNNRGPAHREEETRRK 78
           N+ N+N        N +  R RNN G   RE E  R+
Sbjct: 403 NNNNNNNNSSSNNNNSSSNRERNNSGERERERERERE 439


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,357,157
Number of Sequences: 219361
Number of extensions: 513542
Number of successful extensions: 1599
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1599
length of database: 80,573,946
effective HSP length: 41
effective length of database: 71,580,145
effective search space used: 1717923480
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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