| Clone Name | bags31d12 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | SDK_CAEEL (Q9N3X8) Protein sidekick homolog precursor (Neuronal ... | 28 | 8.6 | 2 | FRU_DROME (Q8IN81) Sex determination protein fruitless | 28 | 8.6 |
|---|
>SDK_CAEEL (Q9N3X8) Protein sidekick homolog precursor (Neuronal IgCAM protein| 4) Length = 2325 Score = 27.7 bits (60), Expect = 8.6 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = -2 Query: 119 NRGPAHREEETRRKVHIIHGKDGGGAPPAYITP 21 N GP H E +K+ + G+D AY+TP Sbjct: 2137 NSGPPHTSVEAMQKLSALVGRDIRSQNTAYVTP 2169
>FRU_DROME (Q8IN81) Sex determination protein fruitless| Length = 955 Score = 27.7 bits (60), Expect = 8.6 Identities = 13/37 (35%), Positives = 17/37 (45%) Frame = -2 Query: 188 NDGNHNQEEK*EXRNRTEPRCRNNRGPAHREEETRRK 78 N+ N+N N + R RNN G RE E R+ Sbjct: 403 NNNNNNNNSSSNNNNSSSNRERNNSGERERERERERE 439 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,357,157 Number of Sequences: 219361 Number of extensions: 513542 Number of successful extensions: 1599 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1562 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1599 length of database: 80,573,946 effective HSP length: 41 effective length of database: 71,580,145 effective search space used: 1717923480 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)