ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags31d12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC093264.2| Homo sapiens chromosome 5 clone RP11-263G2, compl... 46 0.040
2gb|AY592678.1| Uncultured bacterium clone Napoli-2B-56 16S ribos... 42 0.63
3gb|AC139766.15| Homo sapiens 3 BAC RP11-688P9 (Roswell Park Canc... 42 0.63
4gb|AC138390.2| Homo sapiens chromosome 3 clone RP11-81N13, compl... 42 0.63
5dbj|AP003796.2| Gallus gallus genomic DNA, chromosome 5, clone:2... 40 2.5
6emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 40 2.5
7gb|DQ166696.1| Uncultured bacterium clone 141 16S ribosomal RNA ... 38 9.8
8gb|BC075223.1| Xenopus laevis MGC84381 protein, mRNA (cDNA clone... 38 9.8
9ref|XM_362809.1| Magnaporthe grisea 70-15 predicted protein (MG0... 38 9.8
10gb|AC103380.13| Mus musculus chromosome 1, clone RP24-263A16, co... 38 9.8
11gb|AY321225.1| Uncultured bacterium clone SM-OTU33 16S ribosomal... 38 9.8
12gb|AF234128.1| Uncultured bacterium #0319-6C24 16S ribosomal RNA... 38 9.8
13gb|BT012725.1| Lycopersicon esculentum clone 113653F, mRNA sequence 38 9.8
14gb|AF142892.1| Uncultured bacterium EKHO-9 16S ribosomal RNA gen... 38 9.8
15gb|AF424390.1| Uncultured green nonsulfur bacterium MERTZ_0CM_10... 38 9.8
16gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 38 9.8
17gb|AC165293.2| Mus musculus BAC clone RP23-268A5 from chromosome... 38 9.8
18gb|AY391090.1| Uncultured bacterium clone 115 16S ribosomal RNA ... 38 9.8
19gb|AY391012.1| Uncultured bacterium clone 37 16S ribosomal RNA g... 38 9.8
20gb|AY391003.1| Uncultured bacterium clone 28 16S ribosomal RNA g... 38 9.8
21gb|AY391002.1| Uncultured bacterium clone 27 16S ribosomal RNA g... 38 9.8
22gb|AY390996.1| Uncultured bacterium clone 21 16S ribosomal RNA g... 38 9.8
23gb|AY390995.1| Uncultured bacterium clone 20 16S ribosomal RNA g... 38 9.8
24gb|AY390994.1| Uncultured bacterium clone 19 16S ribosomal RNA g... 38 9.8
25gb|AY192295.1| Uncultured Chloroflexi bacterium clone P2-11E 16S... 38 9.8
26emb|Z92826.1|CEC18D11 Caenorhabditis elegans Cosmid C18D11, comp... 38 9.8
27ref|XM_798170.1| Trypanosoma cruzi strain CL Brener calpain-like... 38 9.8
28gb|AC130817.4| Mus musculus BAC clone RP23-68J13 from 16, comple... 38 9.8
29gb|AC107369.9| Mus musculus chromosome 15, clone RP23-368M2, com... 38 9.8
30gb|AC157942.7| Mus musculus BAC clone RP24-118E2 from chromosome... 38 9.8
31emb|AL445669.9| Human DNA sequence from clone RP11-163G10 on chr... 38 9.8
32gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 38 9.8
33ref|XM_775662.1| PREDICTED: Strongylocentrotus purpuratus simila... 38 9.8
34emb|AL137222.17| Human DNA sequence from clone RP1-209B5 on chro... 38 9.8
35gb|AY221067.1| Uncultured bacterium clone CCM6b 16S ribosomal RN... 38 9.8
36emb|AL031681.16|HS862K6 Human DNA sequence from clone RP5-862K6 ... 38 9.8
37emb|Z99105.2|BSUB0002 Bacillus subtilis complete genome (section... 38 9.8
38emb|AL929353.1|PFA929353 Plasmodium falciparum strain 3D7, chrom... 38 9.8
39gb|AC000004.1| Genomic sequence from Human 17, complete sequence 38 9.8
40emb|CR753179.6| Opossum DNA sequence from clone XX-529L22, compl... 38 9.8
41gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare str... 38 9.8
42gb|AC076972.16| Homo sapiens 12 BAC RP11-624G19 (Roswell Park Ca... 38 9.8
43gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare str... 38 9.8
44gb|AC092491.6| Homo sapiens 12 BAC RP11-125G9 (Roswell Park Canc... 38 9.8
45emb|BX510309.11| Zebrafish DNA sequence from clone DKEY-252L17 i... 38 9.8
46emb|BX548073.8| Zebrafish DNA sequence from clone CH211-207C6, c... 38 9.8
47gb|DQ083302.1| Uncultured bacterium clone EC1109 16S ribosomal R... 38 9.8
48gb|AC091198.6| Homo sapiens chromosome 18, clone RP11-258B16, co... 38 9.8
49dbj|AB179308.1| Macaca fascicularis testis cDNA clone: QtsA-1722... 38 9.8
50ref|NM_067131.1| Caenorhabditis elegans C18D11.3 (C18D11.3) mRNA... 38 9.8
51dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.8
52dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.8
53dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.8
54dbj|AB116399.1| Uncultured Chloroflexi bacterium gene for 16S rR... 38 9.8
55gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence 38 9.8
56dbj|AP004592.3| Oryza sativa (japonica cultivar-group) genomic D... 38 9.8
57emb|AJ582210.1|UGR582210 uncultured green non-sulfur bacterium p... 38 9.8
58emb|AJ536891.1|UBA536891 Uncultured bacterium partial 16S rRNA g... 38 9.8
59emb|AJ536889.1|UBA536889 Uncultured bacterium partial 16S rRNA g... 38 9.8
60gb|AY930397.1| Uncultured soil bacterium clone Y11-21 16S riboso... 38 9.8
61gb|AY930382.1| Uncultured soil bacterium clone Y11-6 16S ribosom... 38 9.8
62emb|BX323837.7| Zebrafish DNA sequence from clone DKEY-5N7 in li... 38 9.8
63gb|AY166701.1| Apteronotus leptorhynchus NMDA receptor subunit N... 38 9.8
64gb|AC133283.13| Mus musculus chromosome 15, clone RP24-435N1, co... 38 9.8
65gb|AY917660.1| Uncultured bacterium clone 1959a-30 16S ribosomal... 38 9.8
66gb|AY917547.1| Uncultured bacterium clone 1894a-15 16S ribosomal... 38 9.8
67gb|AC108398.9| Mus musculus chromosome 13, clone RP24-350L19, co... 38 9.8
68emb|AJ390551.1|CAL390551 Candida albicans DNA, clone 54gB 38 9.8
69gb|AY690067.1| Uncultured candidate division OP10 bacterium clon... 38 9.8
70gb|AY689995.1| Uncultured candidate division OP10 bacterium clon... 38 9.8
71gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 38 9.8
72emb|AL731762.2|CNS07YPW Oryza sativa chromosome 12, . BAC OJ1119... 38 9.8
73emb|AL844177.15| Mouse DNA sequence from clone RP23-414O19 on ch... 38 9.8
74emb|CT009540.10| M.truncatula DNA sequence from clone MTH2-39B3 ... 38 9.8
75emb|CT025540.12| Mouse DNA sequence from clone RP24-280B23 on ch... 38 9.8
76gb|AC124514.4| Mus musculus BAC clone RP23-450H18 from 16, compl... 38 9.8
77emb|AJ244807.1|UGR244807 Gram-positive bacteria SOGA31 partial 1... 38 9.8
78emb|AL513133.6|CNS07EFM Human chromosome 14 DNA sequence Partial... 38 9.8
79gb|AY922066.1| Uncultured Chloroflexi bacterium clone AKYG802 16... 38 9.8
80gb|AY922044.1| Uncultured Chloroflexi bacterium clone AKYG628 16... 38 9.8
81gb|AY921965.1| Uncultured Chloroflexi bacterium clone AKYG1623 1... 38 9.8
82gb|AY921908.1| Uncultured Chloroflexi bacterium clone AKYG799 16... 38 9.8
83gb|AY921843.1| Uncultured Chloroflexi bacterium clone AKYG1672 1... 38 9.8
84gb|AY921842.1| Uncultured Chloroflexi bacterium clone AKYG1544 1... 38 9.8
85gb|AY143702.1| Uncultured bacterium clone u18 16S ribosomal RNA ... 38 9.8
86gb|AC138106.9| Mus musculus chromosome 1, clone RP23-278C19, com... 38 9.8
87dbj|AB006424.1| Bacillus subtilis genomic DNA, 70 kb region betw... 38 9.8
88emb|AL645928.9| Mouse DNA sequence from clone RP23-185J21 on chr... 38 9.8 
>gb|AC093264.2| Homo sapiens chromosome 5 clone RP11-263G2, complete sequence
          Length = 164217

 Score = 46.1 bits (23), Expect = 0.040
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 83     tccgagtttcttcctctctatgc 105
              |||||||||||||||||||||||
Sbjct: 125846 tccgagtttcttcctctctatgc 125824
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>gb|AY592678.1| Uncultured bacterium clone Napoli-2B-56 16S ribosomal RNA gene,
            partial sequence
          Length = 1254

 Score = 42.1 bits (21), Expect = 0.63
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 75   caccttcctccgagtttcttc 95
            |||||||||||||||||||||
Sbjct: 1106 caccttcctccgagtttcttc 1086
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>gb|AC139766.15| Homo sapiens 3 BAC RP11-688P9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 187748

 Score = 42.1 bits (21), Expect = 0.63
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 160   ttttcttcttgattatggttg 180
             |||||||||||||||||||||
Sbjct: 59485 ttttcttcttgattatggttg 59505
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>gb|AC138390.2| Homo sapiens chromosome 3 clone RP11-81N13, complete sequence
          Length = 158080

 Score = 42.1 bits (21), Expect = 0.63
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 160    ttttcttcttgattatggttg 180
              |||||||||||||||||||||
Sbjct: 135273 ttttcttcttgattatggttg 135293
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>dbj|AP003796.2| Gallus gallus genomic DNA, chromosome 5, clone:26D12, complete sequence
          Length = 156014

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 45     tcctcctccatccttgccatgtat 68
              |||||||||||||| |||||||||
Sbjct: 116381 tcctcctccatcctggccatgtat 116404
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>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 153     ctcttatttttcttcttgat 172
               ||||||||||||||||||||
Sbjct: 1211125 ctcttatttttcttcttgat 1211144
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>gb|DQ166696.1| Uncultured bacterium clone 141 16S ribosomal RNA gene, partial
           sequence
          Length = 1161

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 75  caccttcctccgagtttct 93
           |||||||||||||||||||
Sbjct: 833 caccttcctccgagtttct 815
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>gb|BC075223.1| Xenopus laevis MGC84381 protein, mRNA (cDNA clone MGC:84381
          IMAGE:6959558), complete cds
          Length = 1066

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 35 cgggcggggctcctcctcc 53
          |||||||||||||||||||
Sbjct: 89 cgggcggggctcctcctcc 71
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>ref|XM_362809.1| Magnaporthe grisea 70-15 predicted protein (MG08239.4) partial mRNA
          Length = 1281

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 174 atggttgccatcattgatg 192
           |||||||||||||||||||
Sbjct: 440 atggttgccatcattgatg 422
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>gb|AC103380.13| Mus musculus chromosome 1, clone RP24-263A16, complete sequence
          Length = 173136

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 154   tcttatttttcttcttgat 172
             |||||||||||||||||||
Sbjct: 66115 tcttatttttcttcttgat 66097
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>gb|AY321225.1| Uncultured bacterium clone SM-OTU33 16S ribosomal RNA gene, partial
           sequence
          Length = 406

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 75  caccttcctccgagtttct 93
           |||||||||||||||||||
Sbjct: 204 caccttcctccgagtttct 186
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>gb|AF234128.1| Uncultured bacterium #0319-6C24 16S ribosomal RNA gene, partial
            sequence
          Length = 1372

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 75   caccttcctccgagtttct 93
            |||||||||||||||||||
Sbjct: 1126 caccttcctccgagtttct 1108
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>gb|BT012725.1| Lycopersicon esculentum clone 113653F, mRNA sequence
          Length = 1204

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 155  cttatttttcttcttgatt 173
            |||||||||||||||||||
Sbjct: 1104 cttatttttcttcttgatt 1122
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>gb|AF142892.1| Uncultured bacterium EKHO-9 16S ribosomal RNA gene, partial
           sequence
          Length = 1003

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 75  caccttcctccgagtttct 93
           |||||||||||||||||||
Sbjct: 667 caccttcctccgagtttct 649
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>gb|AF424390.1| Uncultured green nonsulfur bacterium MERTZ_0CM_109 16S ribosomal
           RNA gene, partial sequence
          Length = 982

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 75  caccttcctccgagtttct 93
           |||||||||||||||||||
Sbjct: 653 caccttcctccgagtttct 635
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 44     ctcctcctccatccttgcc 62
              |||||||||||||||||||
Sbjct: 211111 ctcctcctccatccttgcc 211093
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>gb|AC165293.2| Mus musculus BAC clone RP23-268A5 from chromosome 12, complete sequence
          Length = 179330

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 157    tatttttcttcttgattat 175
              |||||||||||||||||||
Sbjct: 114976 tatttttcttcttgattat 114958
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>gb|AY391090.1| Uncultured bacterium clone 115 16S ribosomal RNA gene, partial
           sequence
          Length = 552

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 75  caccttcctccgagtttct 93
           |||||||||||||||||||
Sbjct: 245 caccttcctccgagtttct 227
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>gb|AY391012.1| Uncultured bacterium clone 37 16S ribosomal RNA gene, partial
           sequence
          Length = 552

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 75  caccttcctccgagtttct 93
           |||||||||||||||||||
Sbjct: 245 caccttcctccgagtttct 227
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>gb|AY391003.1| Uncultured bacterium clone 28 16S ribosomal RNA gene, partial
           sequence
          Length = 552

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 75  caccttcctccgagtttct 93
           |||||||||||||||||||
Sbjct: 245 caccttcctccgagtttct 227
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>gb|AY391002.1| Uncultured bacterium clone 27 16S ribosomal RNA gene, partial
           sequence
          Length = 552

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 75  caccttcctccgagtttct 93
           |||||||||||||||||||
Sbjct: 245 caccttcctccgagtttct 227
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>gb|AY390996.1| Uncultured bacterium clone 21 16S ribosomal RNA gene, partial
           sequence
          Length = 552

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 75  caccttcctccgagtttct 93
           |||||||||||||||||||
Sbjct: 245 caccttcctccgagtttct 227
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>gb|AY390995.1| Uncultured bacterium clone 20 16S ribosomal RNA gene, partial
           sequence
          Length = 554

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 75  caccttcctccgagtttct 93
           |||||||||||||||||||
Sbjct: 246 caccttcctccgagtttct 228
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>gb|AY390994.1| Uncultured bacterium clone 19 16S ribosomal RNA gene, partial
           sequence
          Length = 553

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 75  caccttcctccgagtttct 93
           |||||||||||||||||||
Sbjct: 245 caccttcctccgagtttct 227
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>gb|AY192295.1| Uncultured Chloroflexi bacterium clone P2-11E 16S ribosomal RNA
           gene, partial sequence
          Length = 1379

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 75  caccttcctccgagtttct 93
           |||||||||||||||||||
Sbjct: 268 caccttcctccgagtttct 286
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>emb|Z92826.1|CEC18D11 Caenorhabditis elegans Cosmid C18D11, complete sequence
          Length = 29249

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 154   tcttatttttcttcttgat 172
             |||||||||||||||||||
Sbjct: 19775 tcttatttttcttcttgat 19757
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>ref|XM_798170.1| Trypanosoma cruzi strain CL Brener calpain-like cysteine peptidase
           (Tc00.1047053510801.10) partial mRNA
          Length = 4148

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 43  gctcctcctccatccttgc 61
           |||||||||||||||||||
Sbjct: 564 gctcctcctccatccttgc 546
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>gb|AC130817.4| Mus musculus BAC clone RP23-68J13 from 16, complete sequence
          Length = 193917

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 154   tcttatttttcttcttgat 172
             |||||||||||||||||||
Sbjct: 16884 tcttatttttcttcttgat 16866
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>gb|AC107369.9| Mus musculus chromosome 15, clone RP23-368M2, complete sequence
          Length = 216082

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 158  atttttcttcttgattatg 176
            |||||||||||||||||||
Sbjct: 9359 atttttcttcttgattatg 9341
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>gb|AC157942.7| Mus musculus BAC clone RP24-118E2 from chromosome 13, complete sequence
          Length = 173717

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 156    ttatttttcttcttgatta 174
              |||||||||||||||||||
Sbjct: 170994 ttatttttcttcttgatta 171012
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>emb|AL445669.9| Human DNA sequence from clone RP11-163G10 on chromosome 1 Contains the
             5' end of the ZMYND12 gene for zinc finger MYND domain
             containing 12, a novel gene, the 5' end of a novel gene, a
             ribosomal protein S3a (RPS3A) pseudogene, a thymosin, beta
             4, X-linked (TMSB4X) pseudogene, a novel pseudogene (DC2)
             and two CpG islands, complete sequence
          Length = 153640

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 155   cttatttttcttcttgatt 173
             |||||||||||||||||||
Sbjct: 18039 cttatttttcttcttgatt 18057
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 180    gccatcattgatgatgatg 198
              |||||||||||||||||||
Sbjct: 698609 gccatcattgatgatgatg 698591
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>ref|XM_775662.1| PREDICTED: Strongylocentrotus purpuratus similar to inhibitor of DNA
            binding 2 (LOC575247), mRNA
          Length = 2174

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 47   ctcctccatccttgccatgtata 69
            ||||||||| |||||||||||||
Sbjct: 1973 ctcctccatgcttgccatgtata 1995
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>emb|AL137222.17| Human DNA sequence from clone RP1-209B5 on chromosome 6 Contains the 5'
             end of the AKAP7 gene for A kinase (PRKA) anchor protein
             7, a zinc finger pseudogene and a CpG island, complete
             sequence
          Length = 110724

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 155   cttatttttcttcttgatt 173
             |||||||||||||||||||
Sbjct: 89004 cttatttttcttcttgatt 89022
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>gb|AY221067.1| Uncultured bacterium clone CCM6b 16S ribosomal RNA gene, partial
            sequence
          Length = 1463

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 75   caccttcctccgagtttct 93
            |||||||||||||||||||
Sbjct: 1133 caccttcctccgagtttct 1115
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>emb|AL031681.16|HS862K6 Human DNA sequence from clone RP5-862K6 on chromosome 20q12-13.13
             Contains the 5' end of the L3MBTL gene for l(3)mbt-like
             (Drosophila), the SFRS6 gene for arginine/serine-rich
             splicing factor 6, the EIF4EBP2P gene for eukaryotic
             translation initiation factor 4E binding protein 2
             pseudogene, a pseudogene similar to part of nucleotide
             binding protein (NBP) and two CpG islands, complete
             sequence
          Length = 169649

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 63    atgtataatatgcaccttc 81
             |||||||||||||||||||
Sbjct: 14726 atgtataatatgcaccttc 14708
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>emb|Z99105.2|BSUB0002 Bacillus subtilis complete genome (section 2 of 21): from 213031 to
             415798
          Length = 202768

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 179   tgccatcattgatgatgat 197
             |||||||||||||||||||
Sbjct: 10467 tgccatcattgatgatgat 10485
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>emb|AL929353.1|PFA929353 Plasmodium falciparum strain 3D7, chromosome 5, segment 3/4
          Length = 343050

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 157   tatttttcttcttgattat 175
             |||||||||||||||||||
Sbjct: 75739 tatttttcttcttgattat 75757
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>gb|AC000004.1| Genomic sequence from Human 17, complete sequence
          Length = 141878

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 79    ttcctccgagtttcttcctctct 101
             ||||||||||| |||||||||||
Sbjct: 73215 ttcctccgagtctcttcctctct 73237
to top
>emb|CR753179.6| Opossum DNA sequence from clone XX-529L22, complete sequence
          Length = 135380

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 43     gctcctcctccatccttgccatg 65
              ||||||||||||| |||||||||
Sbjct: 122653 gctcctcctccattcttgccatg 122631
to top
>gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0080O10, from chromosome 3, complete sequence
          Length = 127917

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 44    ctcctcctccatccttgcc 62
             |||||||||||||||||||
Sbjct: 48178 ctcctcctccatccttgcc 48160
to top
>gb|AC076972.16| Homo sapiens 12 BAC RP11-624G19 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 161540

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 155   cttatttttcttcttgattatgg 177
             |||||||||||||| ||||||||
Sbjct: 79699 cttatttttcttctggattatgg 79721
to top
>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNAb0079B22, from chromosome 3, complete sequence
          Length = 156933

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 44     ctcctcctccatccttgcc 62
              |||||||||||||||||||
Sbjct: 145111 ctcctcctccatccttgcc 145093
to top
>gb|AC092491.6| Homo sapiens 12 BAC RP11-125G9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 103308

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 171   attatggttgccatcattgatga 193
             |||||||||||||||||| ||||
Sbjct: 47761 attatggttgccatcattaatga 47783
to top
>emb|BX510309.11| Zebrafish DNA sequence from clone DKEY-252L17 in linkage group 5,
             complete sequence
          Length = 86558

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 160   ttttcttcttgattatggttgcc 182
             |||||||||||||| ||||||||
Sbjct: 64991 ttttcttcttgattttggttgcc 64969
to top
>emb|BX548073.8| Zebrafish DNA sequence from clone CH211-207C6, complete sequence
          Length = 222583

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 160   ttttcttcttgattatggttgcc 182
             |||||||||||||| ||||||||
Sbjct: 13609 ttttcttcttgattttggttgcc 13631
to top
>gb|DQ083302.1| Uncultured bacterium clone EC1109 16S ribosomal RNA gene, partial
            sequence
          Length = 1401

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 75   caccttcctccgagtttct 93
            |||||||||||||||||||
Sbjct: 1109 caccttcctccgagtttct 1091
to top
>gb|AC091198.6| Homo sapiens chromosome 18, clone RP11-258B16, complete sequence
          Length = 173237

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 152   tctcttatttttcttcttg 170
             |||||||||||||||||||
Sbjct: 57643 tctcttatttttcttcttg 57625
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>dbj|AB179308.1| Macaca fascicularis testis cDNA clone: QtsA-17220, similar to human
           chromosome 16 open reading frame 35 (C16orf35), mRNA,
           RefSeq: NM_012075.1
          Length = 1747

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 34  gcgggcggggctcctcctc 52
           |||||||||||||||||||
Sbjct: 714 gcgggcggggctcctcctc 696
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>ref|NM_067131.1| Caenorhabditis elegans C18D11.3 (C18D11.3) mRNA, complete cds
          Length = 582

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 154 tcttatttttcttcttgat 172
           |||||||||||||||||||
Sbjct: 571 tcttatttttcttcttgat 553
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 44       ctcctcctccatccttgcc 62
                |||||||||||||||||||
Sbjct: 27408614 ctcctcctccatccttgcc 27408596
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 44       ctcctcctccatccttgcc 62
                |||||||||||||||||||
Sbjct: 26992334 ctcctcctccatccttgcc 26992352
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
              complete sequence
          Length = 36192742

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 44     ctcctcctccatccttgcc 62
              |||||||||||||||||||
Sbjct: 211111 ctcctcctccatccttgcc 211093
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>dbj|AB116399.1| Uncultured Chloroflexi bacterium gene for 16S rRNA, partial
           sequence, clone: K103
          Length = 1133

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 75  caccttcctccgagtttct 93
           |||||||||||||||||||
Sbjct: 807 caccttcctccgagtttct 789
to top
>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence
          Length = 162241

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 44    ctcctcctccatccttgcc 62
             |||||||||||||||||||
Sbjct: 51545 ctcctcctccatccttgcc 51563
to top
>dbj|AP004592.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0666G10
          Length = 150761

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 44    ctcctcctccatccttgcc 62
             |||||||||||||||||||
Sbjct: 93734 ctcctcctccatccttgcc 93752
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>emb|AJ582210.1|UGR582210 uncultured green non-sulfur bacterium partial 16S rRNA gene, clone
            Gitt-GS-136
          Length = 1386

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 75   caccttcctccgagtttct 93
            |||||||||||||||||||
Sbjct: 1091 caccttcctccgagtttct 1073
to top
>emb|AJ536891.1|UBA536891 Uncultured bacterium partial 16S rRNA gene, clone JG30-KF-CM64
          Length = 1295

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 75   caccttcctccgagtttct 93
            |||||||||||||||||||
Sbjct: 1108 caccttcctccgagtttct 1090
to top
>emb|AJ536889.1|UBA536889 Uncultured bacterium partial 16S rRNA gene, clone JG30-KF-CM41
          Length = 1367

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 75   caccttcctccgagtttct 93
            |||||||||||||||||||
Sbjct: 1143 caccttcctccgagtttct 1125
to top
>gb|AY930397.1| Uncultured soil bacterium clone Y11-21 16S ribosomal RNA gene,
           partial sequence
          Length = 439

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 75  caccttcctccgagtttct 93
           |||||||||||||||||||
Sbjct: 226 caccttcctccgagtttct 244
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>gb|AY930382.1| Uncultured soil bacterium clone Y11-6 16S ribosomal RNA gene,
           partial sequence
          Length = 438

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 75  caccttcctccgagtttct 93
           |||||||||||||||||||
Sbjct: 225 caccttcctccgagtttct 243
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>emb|BX323837.7| Zebrafish DNA sequence from clone DKEY-5N7 in linkage group 18, complete
              sequence
          Length = 228251

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 157    tatttttcttcttgattat 175
              |||||||||||||||||||
Sbjct: 179134 tatttttcttcttgattat 179116
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>gb|AY166701.1| Apteronotus leptorhynchus NMDA receptor subunit NR2B mRNA, complete
            cds
          Length = 4982

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 36   gggcggggctcctcctccatcct 58
            |||||||||||||||||| ||||
Sbjct: 3727 gggcggggctcctcctccttcct 3749
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>gb|AC133283.13| Mus musculus chromosome 15, clone RP24-435N1, complete sequence
          Length = 154352

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 158   atttttcttcttgattatg 176
             |||||||||||||||||||
Sbjct: 89344 atttttcttcttgattatg 89362
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>gb|AY917660.1| Uncultured bacterium clone 1959a-30 16S ribosomal RNA gene, partial
           sequence
          Length = 811

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 75  caccttcctccgagtttct 93
           |||||||||||||||||||
Sbjct: 482 caccttcctccgagtttct 464
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>gb|AY917547.1| Uncultured bacterium clone 1894a-15 16S ribosomal RNA gene, partial
           sequence
          Length = 815

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 75  caccttcctccgagtttct 93
           |||||||||||||||||||
Sbjct: 479 caccttcctccgagtttct 461
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>gb|AC108398.9| Mus musculus chromosome 13, clone RP24-350L19, complete sequence
          Length = 137487

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 156    ttatttttcttcttgatta 174
              |||||||||||||||||||
Sbjct: 119785 ttatttttcttcttgatta 119767
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>emb|AJ390551.1|CAL390551 Candida albicans DNA, clone 54gB
          Length = 639

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 76  accttcctccgagtttctt 94
           |||||||||||||||||||
Sbjct: 456 accttcctccgagtttctt 474
to top
>gb|AY690067.1| Uncultured candidate division OP10 bacterium clone BPC3_B09 16S
           ribosomal RNA gene, partial sequence
          Length = 846

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 75  caccttcctccgagtttct 93
           |||||||||||||||||||
Sbjct: 636 caccttcctccgagtttct 618
to top
>gb|AY689995.1| Uncultured candidate division OP10 bacterium clone BPC2_D09 16S
           ribosomal RNA gene, partial sequence
          Length = 811

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 75  caccttcctccgagtttct 93
           |||||||||||||||||||
Sbjct: 617 caccttcctccgagtttct 599
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 44       ctcctcctccatccttgcc 62
                |||||||||||||||||||
Sbjct: 27334214 ctcctcctccatccttgcc 27334196
to top
>emb|AL731762.2|CNS07YPW Oryza sativa chromosome 12, . BAC OJ1119_E02 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 124605

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 44    ctcctcctccatccttgcc 62
             |||||||||||||||||||
Sbjct: 76934 ctcctcctccatccttgcc 76916
to top
>emb|AL844177.15| Mouse DNA sequence from clone RP23-414O19 on chromosome 4, complete
             sequence
          Length = 144217

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 125   ggcatctaggctctgtccg 143
             |||||||||||||||||||
Sbjct: 97454 ggcatctaggctctgtccg 97472
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>emb|CT009540.10| M.truncatula DNA sequence from clone MTH2-39B3 on chromosome 3,
             complete sequence
          Length = 127327

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 152   tctcttatttttcttcttg 170
             |||||||||||||||||||
Sbjct: 67059 tctcttatttttcttcttg 67077
to top
>emb|CT025540.12| Mouse DNA sequence from clone RP24-280B23 on chromosome 12, complete
              sequence
          Length = 199060

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 157    tatttttcttcttgattat 175
              |||||||||||||||||||
Sbjct: 179825 tatttttcttcttgattat 179843
to top
>gb|AC124514.4| Mus musculus BAC clone RP23-450H18 from 16, complete sequence
          Length = 182032

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 154   tcttatttttcttcttgat 172
             |||||||||||||||||||
Sbjct: 30105 tcttatttttcttcttgat 30123
to top
>emb|AJ244807.1|UGR244807 Gram-positive bacteria SOGA31 partial 16S rRNA gene
          Length = 1312

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 75   caccttcctccgagtttct 93
            |||||||||||||||||||
Sbjct: 1113 caccttcctccgagtttct 1095
to top
>emb|AL513133.6|CNS07EFM Human chromosome 14 DNA sequence Partial sequence from BAC R-114O13 of
             library RPCI-11 from chromosome 14 of Homo sapiens
             (Human), complete sequence
          Length = 30085

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 79    ttcctccgagtttcttcctctct 101
             ||||||||||| |||||||||||
Sbjct: 18089 ttcctccgagtctcttcctctct 18111
to top
>gb|AY922066.1| Uncultured Chloroflexi bacterium clone AKYG802 16S ribosomal RNA
            gene, partial sequence
          Length = 1357

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 75   caccttcctccgagtttct 93
            |||||||||||||||||||
Sbjct: 1134 caccttcctccgagtttct 1116
to top
>gb|AY922044.1| Uncultured Chloroflexi bacterium clone AKYG628 16S ribosomal RNA
            gene, partial sequence
          Length = 1353

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 75   caccttcctccgagtttct 93
            |||||||||||||||||||
Sbjct: 1130 caccttcctccgagtttct 1112
to top
>gb|AY921965.1| Uncultured Chloroflexi bacterium clone AKYG1623 16S ribosomal RNA
            gene, partial sequence
          Length = 1355

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 75   caccttcctccgagtttct 93
            |||||||||||||||||||
Sbjct: 1134 caccttcctccgagtttct 1116
to top
>gb|AY921908.1| Uncultured Chloroflexi bacterium clone AKYG799 16S ribosomal RNA
            gene, partial sequence
          Length = 1359

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 75   caccttcctccgagtttct 93
            |||||||||||||||||||
Sbjct: 1136 caccttcctccgagtttct 1118
to top
>gb|AY921843.1| Uncultured Chloroflexi bacterium clone AKYG1672 16S ribosomal RNA
            gene, partial sequence
          Length = 1360

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 75   caccttcctccgagtttct 93
            |||||||||||||||||||
Sbjct: 1139 caccttcctccgagtttct 1121
to top
>gb|AY921842.1| Uncultured Chloroflexi bacterium clone AKYG1544 16S ribosomal RNA
            gene, partial sequence
          Length = 1361

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 75   caccttcctccgagtttct 93
            |||||||||||||||||||
Sbjct: 1139 caccttcctccgagtttct 1121
to top
>gb|AY143702.1| Uncultured bacterium clone u18 16S ribosomal RNA gene, partial
           sequence
          Length = 400

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 75  caccttcctccgagtttct 93
           |||||||||||||||||||
Sbjct: 208 caccttcctccgagtttct 226
to top
>gb|AC138106.9| Mus musculus chromosome 1, clone RP23-278C19, complete sequence
          Length = 173026

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 154    tcttatttttcttcttgat 172
              |||||||||||||||||||
Sbjct: 153443 tcttatttttcttcttgat 153425
to top
>dbj|AB006424.1| Bacillus subtilis genomic DNA, 70 kb region between 17 and 23 degree
          Length = 69650

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 179   tgccatcattgatgatgat 197
             |||||||||||||||||||
Sbjct: 26499 tgccatcattgatgatgat 26517
to top
>emb|AL645928.9| Mouse DNA sequence from clone RP23-185J21 on chromosome 11, complete
              sequence
          Length = 158913

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 48     tcctccatccttgccatgt 66
              |||||||||||||||||||
Sbjct: 120196 tcctccatccttgccatgt 120214


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,543,282
Number of Sequences: 3902068
Number of extensions: 2543282
Number of successful extensions: 181682
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 181265
Number of HSP's gapped (non-prelim): 417
length of query: 198
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 176
effective length of database: 17,147,199,772
effective search space: 3017907159872
effective search space used: 3017907159872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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